Pregenerated sensors for SELP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026580Ensembl transcript IDs: ENSMUST00000161152.8, ENSMUST00000162746.2
Found 194 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCCAGGAGTGTCCCGCCCACTGCCAGGCCTGTTGTAGAAGCCACTaGACCACCCAAGTACGTCAGAGCTTCCTGGATTGTCAGTGTCCC | + |
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Preference number: 1 (lower is better) Translates to: SQECPAHCQACCRSH*TTQVRQSFLDCQCP Trigger: GGGACACTGACAATCCAGGAAGCTCTGACGTACTTGGGTGGTGCAGTGGCTTCTACAACAGGCCTGGCAGTGGGCGGGACACTCCTGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161152.8 |
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| 3UTR TCA 90 bp | GCATTTGACCGCTCTGCACATGGGGGTCACTGCTGTCCATTGTCCTaGAGCCCTGCAGCGGAGCGAGTTGGCTCCCCTGAGTGTAAATCC | + |
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Preference number: 1 (lower is better) Translates to: AFDRSAHGGHCCPLS*SPAAERVGSPECKS Trigger: GGATTTACACTCAGGGGAGCCAACTCGCTCCGCTGCAGGGCTTCAGGACAATGGACAGCAGTGACCCCCATGTGCAGAGCGGTCAAATGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161152.8 |
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| 3UTR CCA 90 bp | GCTACTCTGCAATCCCAAGAGAAAGACCTTCGGTTTTCCAGAGCCTaGTCACCTGGTGAGGAAGATGCTCCAGGGCCTTGGACTCTCCCG | + |
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Preference number: 1 (lower is better) Translates to: ATLQSQEKDLRFSRA*SPGEEDAPGPWTLP Trigger: CGGGAGAGTCCAAGGCCCTGGAGCATCTTCCTCACCAGGTGACCAGGCTCTGGAAAACCGAAGGTCTTTCTCTTGGGATTGCAGAGTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| 3UTR TCA 90 bp | ATCCCAAGAGAAAGACCTTCGGTTTTCCAGAGCCTGGTCACCTGGTaGGGAAGATGCTCCAGGGCCTTGGACTCTCCCGTTTTCAGCAAC | + |
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Preference number: 1 (lower is better) Translates to: IPRERPSVFQSLVTW*GRCSRALDSPVFSN Trigger: GTTGCTGAAAACGGGAGAGTCCAAGGCCCTGGAGCATCTTCCTCACCAGGTGACCAGGCTCTGGAAAACCGAAGGTCTTTCTCTTGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| 3UTR GCA 90 bp | TTTCCCCAGGGATTGGAACAGTTCATTGCTACTGCTGTGTCCATGTaGAATTCGGAGCATTTGACCGCTCTGCACATGGGGGTCACTGCT | + |
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Preference number: 1 (lower is better) Translates to: FPQGLEQFIATAVSM*NSEHLTALHMGVTA Trigger: AGCAGTGACCCCCATGTGCAGAGCGGTCAAATGCTCCGAATTGCACATGGACACAGCAGTAGCAATGAACTGTTCCAATCCCTGGGGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161152.8 |
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| 3UTR TCA 90 bp | AACAGTTCATTGCTACTGCTGTGTCCATGTGCAATTCGGAGCATTTaGCCGCTCTGCACATGGGGGTCACTGCTGTCCATTGTCCTGAAG | + |
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Preference number: 1 (lower is better) Translates to: NSSLLLLCPCAIRSI*PLCTWGSLLSIVLK Trigger: CTTCAGGACAATGGACAGCAGTGACCCCCATGTGCAGAGCGGTCAAATGCTCCGAATTGCACATGGACACAGCAGTAGCAATGAACTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161152.8 |
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| 3UTR TCA 90 bp | ATGATCTTTGGGTGCTTTGGTGGAGGGAAAGTCTGCAGTCAGATGTaGCGTCTTGGCTCTGTTCCAGATCTTCTGTGTCCCCTAGTACCA | + |
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Preference number: 1 (lower is better) Translates to: MIFGCFGGGKVCSQM*RLGSVPDLLCPLVP Trigger: TGGTACTAGGGGACACAGAAGATCTGGAACAGAGCCAAGACGTCACATCTGACTGCAGACTTTCCCTCCACCAAAGCACCCAAAGATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| 3UTR GCA 90 bp | TCCATAGCTAAAGTTTCCCCAGGGATTGGAACAGTTCATTGCTACTaGTGTGTCCATGTGCAATTCGGAGCATTTGACCGCTCTGCACAT | + |
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Preference number: 1 (lower is better) Translates to: SIAKVSPGIGTVHCY*CVHVQFGAFDRSAH Trigger: ATGTGCAGAGCGGTCAAATGCTCCGAATTGCACATGGACACAGCAGTAGCAATGAACTGTTCCAATCCCTGGGGAAACTTTAGCTATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161152.8 |
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| 3UTR CCA 90 bp | GTTGAGTTATTTATACATCCAAACAATGATCTTTGGGTGCTTTGGTaGAGGGAAAGTCTGCAGTCAGATGTGACGTCTTGGCTCTGTTCC | + |
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Preference number: 1 (lower is better) Translates to: VELFIHPNNDLWVLW*RESLQSDVTSWLCS Trigger: GGAACAGAGCCAAGACGTCACATCTGACTGCAGACTTTCCCTCCACCAAAGCACCCAAAGATCATTGTTTGGATGTATAAATAACTCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| 3UTR CCA 90 bp | GAAGTTGAGTTATTTATACATCCAAACAATGATCTTTGGGTGCTTTaGTGGAGGGAAAGTCTGCAGTCAGATGTGACGTCTTGGCTCTGT | + |
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Preference number: 1 (lower is better) Translates to: EVELFIHPNNDLWVL*WRESLQSDVTSWLC Trigger: ACAGAGCCAAGACGTCACATCTGACTGCAGACTTTCCCTCCACCAAAGCACCCAAAGATCATTGTTTGGATGTATAAATAACTCAACTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| 3UTR CCA 90 bp | ACATTTGGGGAAGTTGAGTTATTTATACATCCAAACAATGATCTTTaGGTGCTTTGGTGGAGGGAAAGTCTGCAGTCAGATGTGACGTCT | + |
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Preference number: 1 (lower is better) Translates to: TFGEVELFIHPNNDL*VLWWRESLQSDVTS Trigger: AGACGTCACATCTGACTGCAGACTTTCCCTCCACCAAAGCACCCAAAGATCATTGTTTGGATGTATAAATAACTCAACTTCCCCAAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| 3UTR CAA 90 bp | GGCAGGTTGGCATGGCATCTGACCAGTGACCGTCCTCTCGGCAGGTaGCTCTCACAGAGCCGTTCAGTGACTGCCCCTCTGGGCACTGGA | + |
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Preference number: 2 (lower is better) Translates to: GRLAWHLTSDRPLGR*LSQSRSVTAPLGTG Trigger: TCCAGTGCCCAGAGGGGCAGTCACTGAACGGCTCTGTGAGAGCAACCTGCCGAGAGGACGGTCACTGGTCAGATGCCATGCCAACCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161152.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAGAGCCAGGAGTGTCCCGCCCACTGCCAGGCCTGTTGTAGAAGCCACTGCATGCTGTCCATTGTCCTaGAGCCCTGCAGCGGAGCGA | + |
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Preference number: 2 (lower is better) Translates to: SRARSVPPTARPVVEATACCPLS*SPAAER Trigger: TCGCTCCGCTGCAGGGCTTCAGGACAATGGACAGCA...TGCAGTGGCTTCTACAACAGGCCTGGCAGTGGGCGGGACACTCCTGGCTCTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161152.8 |
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| 3UTR-3UTR CCA 90 bp | AGCAGAGCCAGGAGTGTCCCGCCCACTGCCAGGCCTGTTGTAGAAGCCACTGCACCAAAGCTTCCCAGGTaGTGTTGGCAGGACATTGTG | + |
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Preference number: 2 (lower is better) Translates to: SRARSVPPTARPVVEATAPKLPR*CWQDIV Trigger: CACAATGTCCTGCCAACACCACCTGGGAAGCTTTGG...TGCAGTGGCTTCTACAACAGGCCTGGCAGTGGGCGGGACACTCCTGGCTCTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161152.8 |
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| 3UTR CAA 90 bp | CCCAAAGTAACAAGTGGTGTTCGGACCAAAGCTTCCCAGGTGGTGTaGGCAGGACATTGTGCCCTGTCCAGGAGTCGTGAGGGCAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: PKVTSGVRTKASQVV*AGHCALSRSREGRA Trigger: TGCCCTGCCCTCACGACTCCTGGACAGGGCACAATGTCCTGCCAACACCACCTGGGAAGCTTTGGTCCGAACACCACTTGTTACTTTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161152.8 |
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| 3UTR CAA 90 bp | AGTACGTCAGAGCTTCCTGGATTGTCAGTGTCCCTGCTTGGCAGGTaGGCATGGCATCTGACCAGTGACCGTCCTCTCGGCAGGTTGCTC | + |
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Preference number: 2 (lower is better) Translates to: STSELPGLSVSLLGR*AWHLTSDRPLGRLL Trigger: GAGCAACCTGCCGAGAGGACGGTCACTGGTCAGATGCCATGCCAACCTGCCAAGCAGGGACACTGACAATCCAGGAAGCTCTGACGTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161152.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGTGGTCAGGGGATATACGACATACATTTGTGCTTTCACTGGAAGGTCCAGCAGGAAGGGGCGGAGCTaGAGGAAGGTGAGGGGCGGA | + |
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Preference number: 2 (lower is better) Translates to: SVVRGYTTYICAFTGRSSRKGRS*RKVRGG Trigger: TCCGCCCCTCACCTTCCTCCAGCTCCGCCCCTTCCT...GCTGGACCTTCCAGTGAAAGCACAAATGTATGTCGTATATCCCCTGACCACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAAGTCTGCAGTCAGATGTGACGTCTTGGCTCTGTTCCAGATCTTCTGTGTCGGTCTGTGGCTGAGCTaGAGGAAGGTGAGGGGCGGA | + |
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Preference number: 2 (lower is better) Translates to: GKSAVRCDVLALFQIFCVGLWLS*RKVRGG Trigger: TCCGCCCCTCACCTTCCTCCAGCTCAGCCACAGACC...GACACAGAAGATCTGGAACAGAGCCAAGACGTCACATCTGACTGCAGACTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCCTGTTGTAGAAGCCACTGCACCACCCAAGTACGTCAGAGCTTCCTGGATTCTTGGCAGGTTGGCATaGCATCTGACCAGTGACCGT | + |
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Preference number: 2 (lower is better) Translates to: RPVVEATAPPKYVRASWILGRLA*HLTSDR Trigger: ACGGTCACTGGTCAGATGCCATGCCAACCTGCCAAG...AATCCAGGAAGCTCTGACGTACTTGGGTGGTGCAGTGGCTTCTACAACAGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161152.8 |
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| 3UTR CAA 90 bp | GAACAGTTCATTGCTACTGCTGTGTCCATGTGCAATTCGGAGCATTaGACCGCTCTGCACATGGGGGTCACTGCTGTCCATTGTCCTGAA | + |
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Preference number: 2 (lower is better) Translates to: EQFIATAVSMCNSEH*TALHMGVTAVHCPE Trigger: TTCAGGACAATGGACAGCAGTGACCCCCATGTGCAGAGCGGTCAAATGCTCCGAATTGCACATGGACACAGCAGTAGCAATGAACTGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161152.8 |
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| 3UTR-3UTR TCA 90 bp | ATGCCCAAATGCCATGGAGTTACAGTCAAGTGTGACAGGAAACTTGACACTTGCGCAATTCGGAGCATTTaGCCGCTCTGCACATGGGGG | + |
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Preference number: 2 (lower is better) Translates to: MPKCHGVTVKCDRKLDTCAIRSI*PLCTWG Trigger: CCCCCATGTGCAGAGCGGTCAAATGCTCCGAATTGC...GCAAGTGTCAAGTTTCCTGTCACACTTGACTGTAACTCCATGGCATTTGGGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161152.8 |
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| 3UTR-3UTR TCA 90 bp | TTGAGTTATTTATACATCCAAACAATGATCTTTGGGTGCTTTGGTGGAGGGAAAGGAGCTGGAGGAAGGTaGGGGGCGGAGCAGGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: LSYLYIQTMIFGCFGGGKGAGGR*GAEQEG Trigger: CCCTTCCTGCTCCGCCCCTCACCTTCCTCCAGCTCC...TTTCCCTCCACCAAAGCACCCAAAGATCATTGTTTGGATGTATAAATAACTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| 3UTR-3UTR TCA 90 bp | GTTGTAGAAGCCACTGCACCACCCAAGTACGTCAGAGCTTCCTGGATTGTCAGTTGCTGGGGCAGGAAGTaGTGTTATGCTAATAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: VVEATAPPKYVRASWIVSCWGRK*CYANSL Trigger: AAGACTATTAGCATAACATCACTTCCTGCCCCAGCA...ACTGACAATCCAGGAAGCTCTGACGTACTTGGGTGGTGCAGTGGCTTCTACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161152.8 |
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| 3UTR-3UTR GCA 90 bp | GGAAGGTCCAGCTGTCATTTAGAGGGTTGTAACTGTGACCACATTGGTGGTAGACCTGCCCACCAACATTaGTACTCTGCAATCCCAAGA | + |
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Preference number: 2 (lower is better) Translates to: GRSSCHLEGCNCDHIGGRPAHQH*YSAIPR Trigger: TCTTGGGATTGCAGAGTAGCAATGTTGGTGGGCAGG...TCTACCACCAATGTGGTCACAGTTACAACCCTCTAAATGACAGCTGGACCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| 3UTR-3UTR CCA 90 bp | GTTGTAGAAGCCACTGCACCACCCAAGTACGTCAGAGCTTCCTGGATTGTCAGTACCCAAAGTAACAAGTaGTGTTCGGACCAAAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: VVEATAPPKYVRASWIVSTQSNK*CSDQSF Trigger: GAAGCTTTGGTCCGAACACCACTTGTTACTTTGGGT...ACTGACAATCCAGGAAGCTCTGACGTACTTGGGTGGTGCAGTGGCTTCTACAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161152.8 |
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| 3UTR-3UTR TCA 90 bp | TCCTCTGTGGTCAGGGGATATACGACATACATTTGTGCTTTCACTGGAAGGTCCACAACCTCATTGATATaGAACATGGAAGACCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: SSVVRGYTTYICAFTGRSTTSLI*NMEDPG Trigger: TCCTGGGTCTTCCATGTTTCATATCAATGAGGTTGT...GGACCTTCCAGTGAAAGCACAAATGTATGTCGTATATCCCCTGACCACAGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCCAAATGCCATGGAGTTACAGTCAAGTGTGACAGGAAACTTGACACTTGCACATCATCTTTCTTTCTaGGACGCTTTCTTAGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: CPNAMELQSSVTGNLTLAHHLSF*DAFLAE Trigger: CTCTGCTAAGAAAGCGTCTCAGAAAGAAAGATGATG...TGCAAGTGTCAAGTTTCCTGTCACACTTGACTGTAACTCCATGGCATTTGGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161152.8 |
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| 3UTR CAA 90 bp | AAATGCCCAAATGCCATGGAGTTACAGTCAAGTGTGACAGGAAACTaGACACTTGCATGTGGAATCCTGAGAAATCGAATGAGACATTGG | + |
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Preference number: 2 (lower is better) Translates to: KCPNAMELQSSVTGN*TLACGILRNRMRHW Trigger: CCAATGTCTCATTCGATTTCTCAGGATTCCACATGCAAGTGTCAAGTTTCCTGTCACACTTGACTGTAACTCCATGGCATTTGGGCATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161152.8 ENSMUST00000162746.2 |
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| 3UTR-3UTR TCA 90 bp | TACAGAGAACCTCAGCAAATGCCCAAATGCCATGGAGTTACAGTCAAGTGTGACTATACATCCAAACAATaGTCTTTGGGTGCTTTGGTG | + |
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Preference number: 2 (lower is better) Translates to: YREPQQMPKCHGVTVKCDYTSKQ*SLGALV Trigger: CACCAAAGCACCCAAAGATCATTGTTTGGATGTATA...GTCACACTTGACTGTAACTCCATGGCATTTGGGCATTTGCTGAGGTTCTCTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| 3UTR TCA 72 bp | GGTGTTGGCAGGACATTGTGCCCTGTCCAGGAGTCGTaGGGGCAGGGCATCGGACTGCTGGGGCAGGAAGTG | + |
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Preference number: 3 (lower is better) Translates to: GVGRTLCPVQES*GQGIGLLGQEV Trigger: CACTTCCTGCCCCAGCAGTCCGATGCCCTGCCCTCACGACTCCTGGACAGGGCACAATGTCCTGCCAACACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161152.8 |
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| 3UTR TCA 72 bp | CGCTCTGCACATGGGGGTCACTGCTGTCCATTGTCCTaGAGCCCTGCAGCGGAGCGAGTTGGCTCCCCTGAG | + |
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Preference number: 3 (lower is better) Translates to: RSAHGGHCCPLS*SPAAERVGSPE Trigger: CTCAGGGGAGCCAACTCGCTCCGCTGCAGGGCTTCAGGACAATGGACAGCAGTGACCCCCATGTGCAGAGCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161152.8 |
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| 3UTR-3UTR CAA 90 bp | ACTGCTGTCCATTGTCCTGAAGCCCTGCAGCGGAGCGAGTTGGCTCCCCTGAGTGGTGTTGGCAGGACATaGTGCCCTGTCCAGGAGTCG | + |
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Preference number: 3 (lower is better) Translates to: TAVHCPEALQRSELAPLSGVGRT*CPVQES Trigger: CGACTCCTGGACAGGGCACAATGTCCTGCCAACACC...ACTCAGGGGAGCCAACTCGCTCCGCTGCAGGGCTTCAGGACAATGGACAGCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161152.8 |
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| 3UTR GCA 72 bp | TCTCGGCAGGTTGCTCTCACAGAGCCGTTCAGTGACTaGCCCTCTGGGCACTGGAAGGTGCAGGTTGATCCA | + |
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Preference number: 3 (lower is better) Translates to: SRQVALTEPFSD*PSGHWKVQVDP Trigger: TGGATCAACCTGCACCTTCCAGTGCCCAGAGGGGCAGTCACTGAACGGCTCTGTGAGAGCAACCTGCCGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161152.8 |
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| 3UTR GCA 72 bp | TGTCCCGCCCACTGCCAGGCCTGTTGTAGAAGCCACTaGACCACCCAAGTACGTCAGAGCTTCCTGGATTGT | + |
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Preference number: 3 (lower is better) Translates to: CPAHCQACCRSH*TTQVRQSFLDC Trigger: ACAATCCAGGAAGCTCTGACGTACTTGGGTGGTGCAGTGGCTTCTACAACAGGCCTGGCAGTGGGCGGGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161152.8 |
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| 3UTR-3UTR CAA 90 bp | CCTGTTGTAGAAGCCACTGCACCACCCAAGTACGTCAGAGCTTCCTGGATTGTCGCTTCCCAGGTGGTGTaGGCAGGACATTGTGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: PVVEATAPPKYVRASWIVASQVV*AGHCAL Trigger: CAGGGCACAATGTCCTGCCAACACCACCTGGGAAGC...GACAATCCAGGAAGCTCTGACGTACTTGGGTGGTGCAGTGGCTTCTACAACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161152.8 |
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| 3UTR TCA 72 bp | GAAAGACCTTCGGTTTTCCAGAGCCTGGTCACCTGGTaGGGAAGATGCTCCAGGGCCTTGGACTCTCCCGTT | + |
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Preference number: 3 (lower is better) Translates to: ERPSVFQSLVTW*GRCSRALDSPV Trigger: AACGGGAGAGTCCAAGGCCCTGGAGCATCTTCCTCACCAGGTGACCAGGCTCTGGAAAACCGAAGGTCTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| 3UTR CCA 72 bp | GAAGCCACTGCACCACCCAAGTACGTCAGAGCTTCCTaGATTGTCAGTGTCCCTGCTTGGCAGGTTGGCATG | + |
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Preference number: 3 (lower is better) Translates to: EATAPPKYVRAS*IVSVPAWQVGM Trigger: CATGCCAACCTGCCAAGCAGGGACACTGACAATCCAGGAAGCTCTGACGTACTTGGGTGGTGCAGTGGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161152.8 |
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| 3UTR-3UTR CAA 90 bp | CCTGTTGTAGAAGCCACTGCACCACCCAAGTACGTCAGAGCTTCCTGGATTGTCTCCCTGCTTGGCAGGTaGGCATGGCATCTGACCAGT | + |
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Preference number: 3 (lower is better) Translates to: PVVEATAPPKYVRASWIVSLLGR*AWHLTS Trigger: ACTGGTCAGATGCCATGCCAACCTGCCAAGCAGGGA...GACAATCCAGGAAGCTCTGACGTACTTGGGTGGTGCAGTGGCTTCTACAACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161152.8 |
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| 3UTR CCA 72 bp | CAATCCCAAGAGAAAGACCTTCGGTTTTCCAGAGCCTaGTCACCTGGTGAGGAAGATGCTCCAGGGCCTTGG | + |
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Preference number: 3 (lower is better) Translates to: QSQEKDLRFSRA*SPGEEDAPGPW Trigger: CCAAGGCCCTGGAGCATCTTCCTCACCAGGTGACCAGGCTCTGGAAAACCGAAGGTCTTTCTCTTGGGATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| 3UTR TCA 72 bp | GGGTGCTTTGGTGGAGGGAAAGTCTGCAGTCAGATGTaGCGTCTTGGCTCTGTTCCAGATCTTCTGTGTCCC | + |
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Preference number: 3 (lower is better) Translates to: GCFGGGKVCSQM*RLGSVPDLLCP Trigger: GGGACACAGAAGATCTGGAACAGAGCCAAGACGTCACATCTGACTGCAGACTTTCCCTCCACCAAAGCACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| 3UTR TCA 72 bp | CGTGAGGGCAGGGCATCGGACTGCTGGGGCAGGAAGTaGTGTTATGCTAATAGTCTTCAAAAGGCATCAGCA | + |
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Preference number: 3 (lower is better) Translates to: REGRASDCWGRK*CYANSLQKASA Trigger: TGCTGATGCCTTTTGAAGACTATTAGCATAACATCACTTCCTGCCCCAGCAGTCCGATGCCCTGCCCTCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161152.8 |
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| 3UTR TCA 72 bp | TTGCTACTGCTGTGTCCATGTGCAATTCGGAGCATTTaGCCGCTCTGCACATGGGGGTCACTGCTGTCCATT | + |
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Preference number: 3 (lower is better) Translates to: LLLLCPCAIRSI*PLCTWGSLLSI Trigger: AATGGACAGCAGTGACCCCCATGTGCAGAGCGGTCAAATGCTCCGAATTGCACATGGACACAGCAGTAGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161152.8 |
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| 3UTR CCA 72 bp | TGGTGGAGGGAAAGTCTGCAGTCAGATGTGACGTCTTaGCTCTGTTCCAGATCTTCTGTGTCCCCTAGTACC | + |
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Preference number: 3 (lower is better) Translates to: WWRESLQSDVTS*LCSRSSVSPST Trigger: GGTACTAGGGGACACAGAAGATCTGGAACAGAGCCAAGACGTCACATCTGACTGCAGACTTTCCCTCCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| 3UTR GCA 72 bp | AAAGTTTCCCCAGGGATTGGAACAGTTCATTGCTACTaGTGTGTCCATGTGCAATTCGGAGCATTTGACCGC | + |
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Preference number: 3 (lower is better) Translates to: KVSPGIGTVHCY*CVHVQFGAFDR Trigger: GCGGTCAAATGCTCCGAATTGCACATGGACACAGCAGTAGCAATGAACTGTTCCAATCCCTGGGGAAACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161152.8 |
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| 3UTR TCA 72 bp | TCTTCTGTGTCCCCTAGTACCATCTGGAGGTTTCTGTaGAAGTCTCAGCAGCAGAGGTGTAAACAACCTCAT | + |
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Preference number: 3 (lower is better) Translates to: SSVSPSTIWRFL*KSQQQRCKQPH Trigger: ATGAGGTTGTTTACACCTCTGCTGCTGAGACTTTCACAGAAACCTCCAGATGGTACTAGGGGACACAGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| 3UTR GCA 72 bp | TTCCTCTGTGGTCAGGGGATATACGACATACATTTGTaGTTTCACTGGAAGGTCCAGCTGTCATTTAGAGGG | + |
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Preference number: 3 (lower is better) Translates to: FLCGQGIYDIHL*FHWKVQLSFRG Trigger: CCCTCTAAATGACAGCTGGACCTTCCAGTGAAAGCACAAATGTATGTCGTATATCCCCTGACCACAGAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| 3UTR GCA 72 bp | ATAGCTAAAGTTTCCCCAGGGATTGGAACAGTTCATTaGTACTGCTGTGTCCATGTGCAATTCGGAGCATTT | + |
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Preference number: 3 (lower is better) Translates to: IAKVSPGIGTVH*YCCVHVQFGAF Trigger: AAATGCTCCGAATTGCACATGGACACAGCAGTAGCAATGAACTGTTCCAATCCCTGGGGAAACTTTAGCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161152.8 |
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| 3UTR CCA 72 bp | ACAGTCAAGTGTGACAGGAAACTTGACACTTGCATGTaGAATCCTGAGAAATCGAATGAGACATTGGCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: TVKCDRKLDTCM*NPEKSNETLAD Trigger: GTCTGCCAATGTCTCATTCGATTTCTCAGGATTCCACATGCAAGTGTCAAGTTTCCTGTCACACTTGACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161152.8 ENSMUST00000162746.2 |
||
| 3UTR CCA 72 bp | TTTATACATCCAAACAATGATCTTTGGGTGCTTTGGTaGAGGGAAAGTCTGCAGTCAGATGTGACGTCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: FIHPNNDLWVLW*RESLQSDVTSW Trigger: CCAAGACGTCACATCTGACTGCAGACTTTCCCTCCACCAAAGCACCCAAAGATCATTGTTTGGATGTATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGTTATTTATACATCCAAACAATGATCTTTGGGTGCTTTGGTGGAGGGAAAGTGTCAGATGTGACGTCTaGGCTCTGTTCCAGATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: ELFIHPNNDLWVLWWRESVRCDV*ALFQIF Trigger: GAAGATCTGGAACAGAGCCAAGACGTCACATCTGAC...ACTTTCCCTCCACCAAAGCACCCAAAGATCATTGTTTGGATGTATAAATAACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| 3UTR GCA 72 bp | GTTTTAAACTACAGAGAACCTCAGCAAATGCCCAAATaGCATGGAGTTACAGTCAAGTGTGACAGGAAACTT | + |
|
Preference number: 3 (lower is better) Translates to: VLNYREPQQMPK*HGVTVKCDRKL Trigger: AAGTTTCCTGTCACACTTGACTGTAACTCCATGGCATTTGGGCATTTGCTGAGGTTCTCTGTAGTTTAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| 3UTR CCA 72 bp | GAAGTTGAGTTATTTATACATCCAAACAATGATCTTTaGGTGCTTTGGTGGAGGGAAAGTCTGCAGTCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: EVELFIHPNNDL*VLWWRESLQSD Trigger: ATCTGACTGCAGACTTTCCCTCCACCAAAGCACCCAAAGATCATTGTTTGGATGTATAAATAACTCAACTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| 3UTR CAA 72 bp | GAGCTTCCTGGATTGTCAGTGTCCCTGCTTGGCAGGTaGGCATGGCATCTGACCAGTGACCGTCCTCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ELPGLSVSLLGR*AWHLTSDRPLG Trigger: GCCGAGAGGACGGTCACTGGTCAGATGCCATGCCAACCTGCCAAGCAGGGACACTGACAATCCAGGAAGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161152.8 |
||
| CDS-3UTR TCA 90 bp | GGTGAGGAAGATGCTCCAGGGCCTTGGACTCTCCCGTTTTCAGCAACAGCAAAGAGTGGTTCACTCCACTaGCCAGAGCCAGTGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GEEDAPGPWTLPFSATAKSGSLH*PEPVQW Trigger: CCACTGCACTGGCTCTGGTCAGTGGAGTGAACCACT...CTTTGCTGTTGCTGAAAACGGGAGAGTCCAAGGCCCTGGAGCATCTTCCTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR GCA 90 bp | AACAAGCCACAGACCAGAGCAGAAACATTTGCTCCTGGGTCTGTGGCTGAGCTGCACACGTGGGAGGGGTaGCTGTCCAGTGTCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: NKPQTRAETFAPGSVAELHTWEG*LSSVQM Trigger: CATCTGGACACTGGACAGGCACCCCTCCCACGTGTG...CAGCTCAGCCACAGACCCAGGAGCAAATGTTTCTGCTCTGGTCTGTGGCTTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR CCA 90 bp | CATCCCCTTAAACTAGAGGTCTGCCTGCCCACCAACATTGCTACTCTGCAATCCCAGGCCATGGTTCCATaGGGAGGGGCTTCCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HPLKLEVCLPTNIATLQSQAMVP*GGASRL Trigger: GAGCCTGGAAGCCCCTCCCCATGGAACCATGGCCTG...GGATTGCAGAGTAGCAATGTTGGTGGGCAGGCAGACCTCTAGTTTAAGGGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR CCA 90 bp | GGTGAGGAAGATGCTCCAGGGCCTTGGACTCTCCCGTTTTCAGCAACAGCAAAGTGCCCCTCTGGGCACTaGAAGGTGCAGGTTGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GEEDAPGPWTLPFSATAKCPSGH*KVQVDP Trigger: TGGATCAACCTGCACCTTCCAGTGCCCAGAGGGGCA...CTTTGCTGTTGCTGAAAACGGGAGAGTCCAAGGCCCTGGAGCATCTTCCTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| 3UTR CAA 72 bp | CCACTGCACCACCCAAGTACGTCAGAGCTTCCTGGATaGTCAGTGTCCCTGCTTGGCAGGTTGGCATGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PLHHPSTSELPG*SVSLLGRLAWH Trigger: ATGCCATGCCAACCTGCCAAGCAGGGACACTGACAATCCAGGAAGCTCTGACGTACTTGGGTGGTGCAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161152.8 |
||
| CDS-3UTR CCA 90 bp | TCACCTGGTGAGGAAGATGCTCCAGGGCCTTGGACTCTCCCGTTTTCAGCAACACTTGGCAGGTTGGCATaGCATCTGACCAGTGACCGT | + |
|
Preference number: 4 (lower is better) Translates to: SPGEEDAPGPWTLPFSATLGRLA*HLTSDR Trigger: ACGGTCACTGGTCAGATGCCATGCCAACCTGCCAAG...TGTTGCTGAAAACGGGAGAGTCCAAGGCCCTGGAGCATCTTCCTCACCAGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR GCA 90 bp | GGAAAGTCTGCAGTCAGATGTGACGTCTTGGCTCTGTTCCAGATCTTCTGTGTCCCAGAAGCCAAACATTaGAGCTCGCCGGGTCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GKSAVRCDVLALFQIFCVPEAKH*SSPGPS Trigger: GGACGGACCCGGCGAGCTGCAATGTTTGGCTTCTGG...GACACAGAAGATCTGGAACAGAGCCAAGACGTCACATCTGACTGCAGACTTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR GCA 90 bp | TCACCTGGTGAGGAAGATGCTCCAGGGCCTTGGACTCTCCCGTTTTCAGCAACACAGCACGAACCCCTCTaGACAGAGAAAAGTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPGEEDAPGPWTLPFSATQHEPL*TEKSAA Trigger: AGCTGCACTTTTCTCTGTGCAGAGGGGTTCGTGCTG...TGTTGCTGAAAACGGGAGAGTCCAAGGCCCTGGAGCATCTTCCTCACCAGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR CCA 90 bp | GTAACAACAAGCCACAGACCAGAGCAGAAACATTTGCTCCTGGGTCTGTGGCTGCAGTCCATGCTCCCATaGATGGGGATCTCCGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VTTSHRPEQKHLLLGLWLQSMLP*MGISGG Trigger: ACCTCCGGAGATCCCCATCCATGGGAGCATGGACTG...CAGCCACAGACCCAGGAGCAAATGTTTCTGCTCTGGTCTGTGGCTTGTTGTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR CCA 90 bp | GGAAAGTCTGCAGTCAGATGTGACGTCTTGGCTCTGTTCCAGATCTTCTGTGTCTTCACAGAATGGGGCTaGGGCTGTCCACTGCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GKSAVRCDVLALFQIFCVFTEWG*GCPLPG Trigger: TCCGGGCAGTGGACAGCCCCAGCCCCATTCTGTGAA...GACACAGAAGATCTGGAACAGAGCCAAGACGTCACATCTGACTGCAGACTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR CCA 90 bp | GGTGAGGAAGATGCTCCAGGGCCTTGGACTCTCCCGTTTTCAGCAACAGCAAAGCCAAAGCTTCCCAGGTaGTGTTGGCAGGACATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GEEDAPGPWTLPFSATAKPKLPR*CWQDIV Trigger: CACAATGTCCTGCCAACACCACCTGGGAAGCTTTGG...CTTTGCTGTTGCTGAAAACGGGAGAGTCCAAGGCCCTGGAGCATCTTCCTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR TCA 90 bp | GGAAAGTCTGCAGTCAGATGTGACGTCTTGGCTCTGTTCCAGATCTTCTGTGTCGGTTGGCGGAGGTGCTaGCCATCTTCCAGACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: GKSAVRCDVLALFQIFCVGWRRC*PSSRHC Trigger: ACAGTGTCTGGAAGATGGTCAGCACCTCCGCCAACC...GACACAGAAGATCTGGAACAGAGCCAAGACGTCACATCTGACTGCAGACTTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR GCA 90 bp | GGAAAGTCTGCAGTCAGATGTGACGTCTTGGCTCTGTTCCAGATCTTCTGTGTCACTCCCCTTGGTTGCTaGAGGACATGTCCTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GKSAVRCDVLALFQIFCVTPLGC*RTCPGR Trigger: CCTGCCAGGACATGTCCTGCAGCAACCAAGGGGAGT...GACACAGAAGATCTGGAACAGAGCCAAGACGTCACATCTGACTGCAGACTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR TCA 90 bp | TCACCTGGTGAGGAAGATGCTCCAGGGCCTTGGACTCTCCCGTTTTCAGCAACAGATGGCTGCAGTTCATaGGAACATGTTGAGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: SPGEEDAPGPWTLPFSATDGCSS*EHVEGC Trigger: ACATCCCTCAACATGTTCTCATGAACTGCAGCCATC...TGTTGCTGAAAACGGGAGAGTCCAAGGCCCTGGAGCATCTTCCTCACCAGGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR TCA 90 bp | GGAAGGTCCAGCTGTCATTTAGAGGGTTGTAACTGTGACCACATTGGTGGTAGAAGGTGCACTGTGAGTTaGAGGAGAACTCCCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRSSCHLEGCNCDHIGGRRCTVS*RRTPPG Trigger: CCCTGGGGGAGTTCTCCTTCAACTCACAGTGCACCT...TCTACCACCAATGTGGTCACAGTTACAACCCTCTAAATGACAGCTGGACCTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR TCA 90 bp | GGTGAGGAAGATGCTCCAGGGCCTTGGACTCTCCCGTTTTCAGCAACAGCAAAGTCATTGCAGGAGAAGTaGCAGATAGAGCCAACACCA | + |
|
Preference number: 4 (lower is better) Translates to: GEEDAPGPWTLPFSATAKSLQEK*QIEPTP Trigger: TGGTGTTGGCTCTATCTGTCACTTCTCCTGCAATGA...CTTTGCTGTTGCTGAAAACGGGAGAGTCCAAGGCCCTGGAGCATCTTCCTCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR GCA 90 bp | TCACCTGGTGAGGAAGATGCTCCAGGGCCTTGGACTCTCCCGTTTTCAGCAACACTGCACAGAGAAAAGTaGAGCTGCTGTTGTACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SPGEEDAPGPWTLPFSATLHREK*SCCCTQ Trigger: TTGGGTACAACAGCAGCTGCACTTTTCTCTGTGCAG...TGTTGCTGAAAACGGGAGAGTCCAAGGCCCTGGAGCATCTTCCTCACCAGGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR GCA 90 bp | CATCCCCTTAAACTAGAGGTCTGCCTGCCCACCAACATTGCTACTCTGCAATCCCAATCCAGGTTGCCTTaGTCTGGGGCGAAGATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HPLKLEVCLPTNIATLQSQSRLP*SGAKIP Trigger: AGGAATCTTCGCCCCAGAGCAAGGCAACCTGGATTG...GGATTGCAGAGTAGCAATGTTGGTGGGCAGGCAGACCTCTAGTTTAAGGGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR CCA 90 bp | GGAAAGTCTGCAGTCAGATGTGACGTCTTGGCTCTGTTCCAGATCTTCTGTGTCTCGATGCACTCCCCTTaGTTGCTGCAGGACATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GKSAVRCDVLALFQIFCVSMHSP*LLQDMS Trigger: GGACATGTCCTGCAGCAACCAAGGGGAGTGCATCGA...GACACAGAAGATCTGGAACAGAGCCAAGACGTCACATCTGACTGCAGACTTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR CCA 90 bp | GTAACAACAAGCCACAGACCAGAGCAGAAACATTTGCTCCTGGGTCTGTGGCTGTGGCCCATAGAAGCCTaGGTAGCAGGAGCAGGTATA | + |
|
Preference number: 4 (lower is better) Translates to: VTTSHRPEQKHLLLGLWLWPIEA*VAGAGI Trigger: TATACCTGCTCCTGCTACCCAGGCTTCTATGGGCCA...CAGCCACAGACCCAGGAGCAAATGTTTCTGCTCTGGTCTGTGGCTTGTTGTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR CCA 90 bp | AACAAGCCACAGACCAGAGCAGAAACATTTGCTCCTGGGTCTGTGGCTGAGCTGGACGTATTCACACTCTaGCCCATAGAAGCCTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NKPQTRAETFAPGSVAELDVFTL*PIEAWV Trigger: TACCCAGGCTTCTATGGGCCAGAGTGTGAATACGTC...CAGCTCAGCCACAGACCCAGGAGCAAATGTTTCTGCTCTGGTCTGTGGCTTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR TCA 90 bp | AACCTCAGCAAATGCCCAAATGCCATGGAGTTACAGTCAAGTGTGACAGGAAACGCAATTCGGAGCATTTaGCCGCTCTGCACATGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NLSKCPNAMELQSSVTGNAIRSI*PLCTWG Trigger: CCCCCATGTGCAGAGCGGTCAAATGCTCCGAATTGC...GTTTCCTGTCACACTTGACTGTAACTCCATGGCATTTGGGCATTTGCTGAGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR GCA 90 bp | TGCCCAAATGCCATGGAGTTACAGTCAAGTGTGACAGGAAACTTGACACTTGCATGCACTCCCCTTGGTTaGTGCAGGACATGTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CPNAMELQSSVTGNLTLACTPLG*CRTCPG Trigger: GCCAGGACATGTCCTGCAGCAACCAAGGGGAGTGCA...TGCAAGTGTCAAGTTTCCTGTCACACTTGACTGTAACTCCATGGCATTTGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR GCA 90 bp | GGAAGGTCCAGCTGTCATTTAGAGGGTTGTAACTGTGACCACATTGGTGGTAGAACTGACCAGAGCCAGTaGAGTGGAGTGTGTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRSSCHLEGCNCDHIGGRTDQSQ*SGVCWS Trigger: GCTCCAACACACTCCACTGCACTGGCTCTGGTCAGT...TCTACCACCAATGTGGTCACAGTTACAACCCTCTAAATGACAGCTGGACCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR GCA 90 bp | AACAAGCCACAGACCAGAGCAGAAACATTTGCTCCTGGGTCTGTGGCTGAGCTGCATCACAGGAAAAGCTaGAGACTGACTGGTACGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NKPQTRAETFAPGSVAELHHRKS*RLTGTS Trigger: TGACGTACCAGTCAGTCTGCAGCTTTTCCTGTGATG...CAGCTCAGCCACAGACCCAGGAGCAAATGTTTCTGCTCTGGTCTGTGGCTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR CCA 90 bp | GGTGAGGAAGATGCTCCAGGGCCTTGGACTCTCCCGTTTTCAGCAACAGCAAAGACCCAAAGTAACAAGTaGTGTTCGGACCAAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GEEDAPGPWTLPFSATAKTQSNK*CSDQSF Trigger: GAAGCTTTGGTCCGAACACCACTTGTTACTTTGGGT...CTTTGCTGTTGCTGAAAACGGGAGAGTCCAAGGCCCTGGAGCATCTTCCTCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR TCA 90 bp | TACAGAGAACCTCAGCAAATGCCCAAATGCCATGGAGTTACAGTCAAGTGTGACGCTGAAGGTGCACTGTaGGTTGAAGGAGAACTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: YREPQQMPKCHGVTVKCDAEGAL*VEGELP Trigger: GGGGAGTTCTCCTTCAACTCACAGTGCACCTTCAGC...GTCACACTTGACTGTAACTCCATGGCATTTGGGCATTTGCTGAGGTTCTCTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR TCA 90 bp | TCTGTGGTCAGGGGATATACGACATACATTTGTGCTTTCACTGGAAGGTCCAGCGGAAAAGCTGCAGACTaGCTGGTACGTCAAGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: SVVRGYTTYICAFTGRSSGKAAD*LVRQGT Trigger: GGTACCTTGACGTACCAGTCAGTCTGCAGCTTTTCC...GCTGGACCTTCCAGTGAAAGCACAAATGTATGTCGTATATCCCCTGACCACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR CCA 90 bp | GGAAAGTCTGCAGTCAGATGTGACGTCTTGGCTCTGTTCCAGATCTTCTGTGTCTACGTCAGAGCTTCCTaGATTGTCAGTGTCCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GKSAVRCDVLALFQIFCVYVRAS*IVSVPA Trigger: AGCAGGGACACTGACAATCCAGGAAGCTCTGACGTA...GACACAGAAGATCTGGAACAGAGCCAAGACGTCACATCTGACTGCAGACTTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR TCA 90 bp | TTGAGTTATTTATACATCCAAACAATGATCTTTGGGTGCTTTGGTGGAGGGAAACCTGTCCAGGAGTCGTaGGGGCAGGGCATCGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: LSYLYIQTMIFGCFGGGKPVQES*GQGIGL Trigger: CAGTCCGATGCCCTGCCCTCACGACTCCTGGACAGG...TTTCCCTCCACCAAAGCACCCAAAGATCATTGTTTGGATGTATAAATAACTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR TCA 90 bp | ATGCCCAAATGCCATGGAGTTACAGTCAAGTGTGACAGGAAACTTGACACTTGCGTTCCTAGGTGGCTGTaGGGGTTCAAGGGGCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: MPKCHGVTVKCDRKLDTCVPRWL*GFKGHF Trigger: AAAATGCCCCTTGAACCCTCACAGCCACCTAGGAAC...GCAAGTGTCAAGTTTCCTGTCACACTTGACTGTAACTCCATGGCATTTGGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR GCA 90 bp | ATGCCCAAATGCCATGGAGTTACAGTCAAGTGTGACAGGAAACTTGACACTTGCGAGAACAATCCAGGTTaGCTTGCTCTGGGGCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: MPKCHGVTVKCDRKLDTCENNPG*LALGRR Trigger: TCTTCGCCCCAGAGCAAGGCAACCTGGATTGTTCTC...GCAAGTGTCAAGTTTCCTGTCACACTTGACTGTAACTCCATGGCATTTGGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR CCA 90 bp | CATCCCCTTAAACTAGAGGTCTGCCTGCCCACCAACATTGCTACTCTGCAATCCAGTTTCCCCAGGGATTaGAACAGTTCATTGCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: HPLKLEVCLPTNIATLQSSFPRD*NSSLLL Trigger: CAGTAGCAATGAACTGTTCCAATCCCTGGGGAAACT...GGATTGCAGAGTAGCAATGTTGGTGGGCAGGCAGACCTCTAGTTTAAGGGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR TCA 90 bp | CGGTTTTGCACCCAAAGTAACAAGTGGTGTTCGGACCAAAGCTTCCCAGGTGGTGCTCAACATGAAAGATaGAATAGAAGCCATGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RFCTQSNKWCSDQSFPGGAQHER*NRSHVP Trigger: AGGGACATGGCTTCTATTTCATCTTTCATGTTGAGC...ACCACCTGGGAAGCTTTGGTCCGAACACCACTTGTTACTTTGGGTGCAAAACCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161152.8 |
||
| CDS-3UTR TCA 90 bp | GTAACAACAAGCCACAGACCAGAGCAGAAACATTTGCTCCTGGGTCTGTGGCTGATCTCCACACAGTCCTaGTTGTTCTTCTTGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VTTSHRPEQKHLLLGLWLISTQS*LFFLLL Trigger: CAACAACAAGAAGAACAATCAGGACTGTGTGGAGAT...CAGCCACAGACCCAGGAGCAAATGTTTCTGCTCTGGTCTGTGGCTTGTTGTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR TCA 90 bp | GGAAAGTCTGCAGTCAGATGTGACGTCTTGGCTCTGTTCCAGATCTTCTGTGTCATCCTTCATCGCACATaGACTGGCATGTGGATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GKSAVRCDVLALFQIFCVILHRT*TGMWIC Trigger: ACAAATCCACATGCCAGTTCATGTGCGATGAAGGAT...GACACAGAAGATCTGGAACAGAGCCAAGACGTCACATCTGACTGCAGACTTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR GCA 90 bp | TGCCCAAATGCCATGGAGTTACAGTCAAGTGTGACAGGAAACTTGACACTTGCAAAGGCAGCAATTGGGTaGATACAGGCCATGGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CPNAMELQSSVTGNLTLAKAAIG*IQAMVP Trigger: TGGAACCATGGCCTGTATGCACCCAATTGCTGCCTT...TGCAAGTGTCAAGTTTCCTGTCACACTTGACTGTAACTCCATGGCATTTGGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR TCA 90 bp | TACAGAGAACCTCAGCAAATGCCCAAATGCCATGGAGTTACAGTCAAGTGTGACGCAGCCACTTCCTTCTaGTTTACAAGCTCAGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: YREPQQMPKCHGVTVKCDAATSF*FTSSEI Trigger: GATCTCTGAGCTTGTAAATCAGAAGGAAGTGGCTGC...GTCACACTTGACTGTAACTCCATGGCATTTGGGCATTTGCTGAGGTTCTCTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR TCA 90 bp | TTGAGTTATTTATACATCCAAACAATGATCTTTGGGTGCTTTGGTGGAGGGAAATGCTGTCCATTGTCCTaGAGCCCTGCAGCGGAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LSYLYIQTMIFGCFGGGKCCPLS*SPAAER Trigger: TCGCTCCGCTGCAGGGCTTCAGGACAATGGACAGCA...TTTCCCTCCACCAAAGCACCCAAAGATCATTGTTTGGATGTATAAATAACTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR GCA 90 bp | ATGCCCAAATGCCATGGAGTTACAGTCAAGTGTGACAGGAAACTTGACACTTGCACTAAGTCTGTGAAGTaGCTCCTACAGAACACCCGT | + |
|
Preference number: 4 (lower is better) Translates to: MPKCHGVTVKCDRKLDTCTKSVK*LLQNTR Trigger: ACGGGTGTTCTGTAGGAGGCACTTCACAGACTTAGT...GCAAGTGTCAAGTTTCCTGTCACACTTGACTGTAACTCCATGGCATTTGGGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR GCA 90 bp | TGCCCAAATGCCATGGAGTTACAGTCAAGTGTGACAGGAAACTTGACACTTGCAGGAAACTCTGGACATTaGAACGCTTCACAGAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: CPNAMELQSSVTGNLTLAGNSGH*NASQNG Trigger: CCCATTCTGTGAAGCGTTGCAATGTCCAGAGTTTCC...TGCAAGTGTCAAGTTTCCTGTCACACTTGACTGTAACTCCATGGCATTTGGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGGTCCAGCTGTCATTTAGAGGGTTGTAACTGTGACCACATTGGTGGTAGAACTCAAATTTACAGCTaGAGTCGTAGGCAAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRSSCHLEGCNCDHIGGRTQIYS*SRRQRQ Trigger: CTGCCTTTGCCTACGACTCCAGCTGTAAATTTGAGT...TCTACCACCAATGTGGTCACAGTTACAACCCTCTAAATGACAGCTGGACCTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS-3UTR CCA 90 bp | AACCTCAGCAAATGCCCAAATGCCATGGAGTTACAGTCAAGTGTGACAGGAAACAATAGCTTCACAGGTTaGCAGTGGTTCACTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: NLSKCPNAMELQSSVTGNNSFTG*QWFTPL Trigger: CAGTGGAGTGAACCACTGCCAACCTGTGAAGCTATT...GTTTCCTGTCACACTTGACTGTAACTCCATGGCATTTGGGCATTTGCTGAGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS-3UTR CCA 90 bp | GAGTTATTTATACATCCAAACAATGATCTTTGGGTGCTTTGGTGGAGGGAAAGTCAACGCTTCACAGAATaGGGCTGGGGCTGTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: ELFIHPNNDLWVLWWRESQRFTE*GWGCPL Trigger: CAGTGGACAGCCCCAGCCCCATTCTGTGAAGCGTTG...ACTTTCCCTCCACCAAAGCACCCAAAGATCATTGTTTGGATGTATAAATAACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS-3UTR TCA 90 bp | GGAAAGTCTGCAGTCAGATGTGACGTCTTGGCTCTGTTCCAGATCTTCTGTGTCTTCATGAGAACATGTTaGGGGATGTTGACTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GKSAVRCDVLALFQIFCVFMRTC*GMLTFP Trigger: TGGAAAAGTCAACATCCCTCAACATGTTCTCATGAA...GACACAGAAGATCTGGAACAGAGCCAAGACGTCACATCTGACTGCAGACTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS-3UTR CCA 90 bp | GGAAGGTCCAGCTGTCATTTAGAGGGTTGTAACTGTGACCACATTGGTGGTAGAGTAAGAGTTGAAGAATaGGATGACGTCATTGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GRSSCHLEGCNCDHIGGRVRVEE*DDVIEV Trigger: CACCTCAATGACGTCATCCCATTCTTCAACTCTTAC...TCTACCACCAATGTGGTCACAGTTACAACCCTCTAAATGACAGCTGGACCTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS-3UTR CCA 90 bp | TGCCCAAATGCCATGGAGTTACAGTCAAGTGTGACAGGAAACTTGACACTTGCAAGTCAGCACACTGAATaGCATCATTTCCCTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CPNAMELQSSVTGNLTLASQHTE*HHFPSA Trigger: TGCTGAAGGGAAATGATGCCATTCAGTGTGCTGACT...TGCAAGTGTCAAGTTTCCTGTCACACTTGACTGTAACTCCATGGCATTTGGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR TCA 90 bp | AACCTCAGCAAATGCCCAAATGCCATGGAGTTACAGTCAAGTGTGACAGGAAACCATCATCTTTCTTTCTaGGACGCTTTCTTAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NLSKCPNAMELQSSVTGNHHLSF*DAFLAE Trigger: CTCTGCTAAGAAAGCGTCTCAGAAAGAAAGATGATG...GTTTCCTGTCACACTTGACTGTAACTCCATGGCATTTGGGCATTTGCTGAGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS-3UTR GCA 90 bp | TGCCCAAATGCCATGGAGTTACAGTCAAGTGTGACAGGAAACTTGACACTTGCAATGAGTATGCCTTTGTaGTGTAGTTATAGGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: CPNAMELQSSVTGNLTLAMSMPL*CSYRST Trigger: CGTGGACCTATAACTACAGCACAAAGGCATACTCAT...TGCAAGTGTCAAGTTTCCTGTCACACTTGACTGTAACTCCATGGCATTTGGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS-3UTR CCA 90 bp | ATGCCCAAATGCCATGGAGTTACAGTCAAGTGTGACAGGAAACTTGACACTTGCATGTGGATTTGTAGGTaGAATTCCCAAGAGGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: MPKCHGVTVKCDRKLDTCMWICR*NSQEAE Trigger: TTCAGCCTCTTGGGAATTCCACCTACAAATCCACAT...GCAAGTGTCAAGTTTCCTGTCACACTTGACTGTAACTCCATGGCATTTGGGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR GCA 90 bp | AACCTCAGCAAATGCCCAAATGCCATGGAGTTACAGTCAAGTGTGACAGGAAACATCTTCCAGACACTGTaGATTCCACATTTTCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: NLSKCPNAMELQSSVTGNIFQTL*IPHFQI Trigger: GATCTGAAAATGTGGAATGCACAGTGTCTGGAAGAT...GTTTCCTGTCACACTTGACTGTAACTCCATGGCATTTGGGCATTTGCTGAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS-3UTR CCA 90 bp | GAGTTATTTATACATCCAAACAATGATCTTTGGGTGCTTTGGTGGAGGGAAAGTTGTTCTTCTTGTTGTTaGGCTCGTTGTCGGCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ELFIHPNNDLWVLWWRESCSSCC*ARCRPS Trigger: ACTGGGCCGACAACGAGCCCAACAACAAGAAGAACA...ACTTTCCCTCCACCAAAGCACCCAAAGATCATTGTTTGGATGTATAAATAACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| 3UTR CAA 72 bp | AATGCCATGGAGTTACAGTCAAGTGTGACAGGAAACTaGACACTTGCATGTGGAATCCTGAGAAATCGAATG | + |
|
Preference number: 4 (lower is better) Translates to: NAMELQSSVTGN*TLACGILRNRM Trigger: CATTCGATTTCTCAGGATTCCACATGCAAGTGTCAAGTTTCCTGTCACACTTGACTGTAACTCCATGGCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161152.8 ENSMUST00000162746.2 |
||
| CDS-3UTR GCA 90 bp | TTGAGTTATTTATACATCCAAACAATGATCTTTGGGTGCTTTGGTGGAGGGAAAGTTCATCATTCCACTTaGCAGGGGCCGAGTTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSYLYIQTMIFGCFGGGKVHHST*QGPSYS Trigger: AGAGTAACTCGGCCCCTGGCAAGTGGAATGATGAAC...TTTCCCTCCACCAAAGCACCCAAAGATCATTGTTTGGATGTATAAATAACTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS-3UTR CCA 90 bp | GAGTTATTTATACATCCAAACAATGATCTTTGGGTGCTTTGGTGGAGGGAAAGTGCTCTATATCCAGGCTaGCACTCAAATTTACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELFIHPNNDLWVLWWRESALYPG*HSNLQL Trigger: CAGCTGTAAATTTGAGTGCCAGCCTGGATATAGAGC...ACTTTCCCTCCACCAAAGCACCCAAAGATCATTGTTTGGATGTATAAATAACTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS GCA 90 bp | AGAAGCCTGGGTAGCAGGAGCAGGTATAGCTCCCAATGGTCTCGATaGACTCCCCTTGGTTGCTGCAGGACATGTCCTGGCAGGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RSLGSRSRYSSQWSR*TPLGCCRTCPGRRL Trigger: CAGCCTCCTGCCAGGACATGTCCTGCAGCAACCAAGGGGAGTGCATCGAGACCATTGGGAGCTATACCTGCTCCTGCTACCCAGGCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS GCA 90 bp | GAGCAGTTCACCTGGGCTTTACTGGGAACCGGAAACTCTGGACATTaGAACGCTTCACAGAATGGGGCTGGGGCTGTCCACTGCCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: EQFTWALLGTGNSGH*NASQNGAGAVHCPE Trigger: CTCCGGGCAGTGGACAGCCCCAGCCCCATTCTGTGAAGCGTTGCAATGTCCAGAGTTTCCGGTTCCCAGTAAAGCCCAGGTGAACTGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS CCA 90 bp | CTGGCCCATAGAAGCCTGGGTAGCAGGAGCAGGTATAGCTCCCAATaGTCTCGATGCACTCCCCTTGGTTGCTGCAGGACATGTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LAHRSLGSRSRYSSQ*SRCTPLGCCRTCPG Trigger: GCCAGGACATGTCCTGCAGCAACCAAGGGGAGTGCATCGAGACCATTGGGAGCTATACCTGCTCCTGCTACCCAGGCTTCTATGGGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CCA 90 bp | AGCTGGAGTCGTAGGCAAAGGCAGCAATTGGGTGCATACAGGCCATaGTTCCATGGGGAGGGGCTTCCAGGCTCTGACATTGCACAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: SWSRRQRQQLGAYRP*FHGEGLPGSDIAQR Trigger: ACGCTGTGCAATGTCAGAGCCTGGAAGCCCCTCCCCATGGAACCATGGCCTGTATGCACCCAATTGCTGCCTTTGCCTACGACTCCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS CCA 90 bp | GGGATCCGAGCAGTTCACCTGGGCTTTACTGGGAACCGGAAACTCTaGACATTGCAACGCTTCACAGAATGGGGCTGGGGCTGTCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: GIRAVHLGFTGNRKL*TLQRFTEWGWGCPL Trigger: CAGTGGACAGCCCCAGCCCCATTCTGTGAAGCGTTGCAATGTCCAGAGTTTCCGGTTCCCAGTAAAGCCCAGGTGAACTGCTCGGATCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS TCA 90 bp | GGTTCACACGCAATAGCTTCACAGGTTGGCAGTGGTTCACTCCACTaGCCAGAGCCAGTGCAGTGGAGTGTGTTGGAGCCCCTCGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: GSHAIASQVGSGSLH*PEPVQWSVLEPLAL Trigger: TAGAGCGAGGGGCTCCAACACACTCCACTGCACTGGCTCTGGTCAGTGGAGTGAACCACTGCCAACCTGTGAAGCTATTGCGTGTGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS TCA 90 bp | AACAATCCAGGTTGCCTTGCTCTGGGGCGAAGATTCCTGGACACTTaGTGGCTTCACACGTGGGAGGGGTGCCTGTCCAGTGTCCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: NNPGCLALGRRFLDT*WLHTWEGCLSSVQM Trigger: CATCTGGACACTGGACAGGCACCCCTCCCACGTGTGAAGCCATCAAGTGTCCAGGAATCTTCGCCCCAGAGCAAGGCAACCTGGATTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CCA 90 bp | GGGGATCTCCGGAGGTTCACACGCAATAGCTTCACAGGTTGGCAGTaGTTCACTCCACTGACCAGAGCCAGTGCAGTGGAGTGTGTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GDLRRFTRNSFTGWQ*FTPLTRASAVECVG Trigger: TCCAACACACTCCACTGCACTGGCTCTGGTCAGTGGAGTGAACCACTGCCAACCTGTGAAGCTATTGCGTGTGAACCTCCGGAGATCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CCA 90 bp | GGGAACCGGAAACTCTGGACATTGCAACGCTTCACAGAATGGGGCTaGGGCTGTCCACTGCCCGGAGTCAGCACACTGAATGGCATCATT | + |
|
Preference number: 5 (lower is better) Translates to: GNRKLWTLQRFTEWG*GCPLPGVSTLNGII Trigger: AATGATGCCATTCAGTGTGCTGACTCCGGGCAGTGGACAGCCCCAGCCCCATTCTGTGAAGCGTTGCAATGTCCAGAGTTTCCGGTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CCA 90 bp | TTTACTGGGAACCGGAAACTCTGGACATTGCAACGCTTCACAGAATaGGGCTGGGGCTGTCCACTGCCCGGAGTCAGCACACTGAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: FTGNRKLWTLQRFTE*GWGCPLPGVSTLNG Trigger: GCCATTCAGTGTGCTGACTCCGGGCAGTGGACAGCCCCAGCCCCATTCTGTGAAGCGTTGCAATGTCCAGAGTTTCCGGTTCCCAGTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CCA 90 bp | GACATGAGAACAATCCAGGTTGCCTTGCTCTGGGGCGAAGATTCCTaGACACTTGATGGCTTCACACGTGGGAGGGGTGCCTGTCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: DMRTIQVALLWGEDS*TLDGFTRGRGACPV Trigger: CACTGGACAGGCACCCCTCCCACGTGTGAAGCCATCAAGTGTCCAGGAATCTTCGCCCCAGAGCAAGGCAACCTGGATTGTTCTCATGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS-3UTR CAA 90 bp | GGTGAGGAAGATGCTCCAGGGCCTTGGACTCTCCCGTTTTCAGCAACAGCAAAGTTGTTGTTGGGCTCGTaGTCGGCCCAGTTCTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GEEDAPGPWTLPFSATAKLLLGS*SAQFSA Trigger: GGCTGAGAACTGGGCCGACAACGAGCCCAACAACAA...CTTTGCTGTTGCTGAAAACGGGAGAGTCCAAGGCCCTGGAGCATCTTCCTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS-3UTR CAA 90 bp | GGTGAGGAAGATGCTCCAGGGCCTTGGACTCTCCCGTTTTCAGCAACAGCAAAGTCCCTGCTTGGCAGGTaGGCATGGCATCTGACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GEEDAPGPWTLPFSATAKSLLGR*AWHLTS Trigger: ACTGGTCAGATGCCATGCCAACCTGCCAAGCAGGGA...CTTTGCTGTTGCTGAAAACGGGAGAGTCCAAGGCCCTGGAGCATCTTCCTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS TCA 90 bp | TGCTCCCACCAAGAGCGAGCCTTCATCACAGGAAAAGCTGCAGACTaGCTGGTACGTCAAGGTACCGAAGGGATCCGAGCAGTTCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: CSHQERAFITGKAAD*LVRQGTEGIRAVHL Trigger: CAGGTGAACTGCTCGGATCCCTTCGGTACCTTGACGTACCAGTCAGTCTGCAGCTTTTCCTGTGATGAAGGCTCGCTCTTGGTGGGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS TCA 90 bp | ATGGATCCATTCTCAGGACTGAGCATAGGGGCACAGGACACAGCTTaGCATTCGGGAGGAGCCCCATTCCAGTGTCCAGTAGCCAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: MDPFSGLSIGAQDTA*HSGGAPFQCPVARH Trigger: ATGCCTGGCTACTGGACACTGGAATGGGGCTCCTCCCGAATGTCAAGCTGTGTCCTGTGCCCCTATGCTCAGTCCTGAGAATGGATCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CCA 90 bp | CTGGCACTCAAATTTACAGCTGGAGTCGTAGGCAAAGGCAGCAATTaGGTGCATACAGGCCATGGTTCCATGGGGAGGGGCTTCCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LALKFTAGVVGKGSN*VHTGHGSMGRGFQA Trigger: AGCCTGGAAGCCCCTCCCCATGGAACCATGGCCTGTATGCACCCAATTGCTGCCTTTGCCTACGACTCCAGCTGTAAATTTGAGTGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS-3UTR CAA 90 bp | GGAAAGTCTGCAGTCAGATGTGACGTCTTGGCTCTGTTCCAGATCTTCTGTGTCGGCACAGGACACAGCTaGACATTCGGGAGGAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GKSAVRCDVLALFQIFCVGTGHS*TFGRSP Trigger: GGGGCTCCTCCCGAATGTCAAGCTGTGTCCTGTGCC...GACACAGAAGATCTGGAACAGAGCCAAGACGTCACATCTGACTGCAGACTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS-3UTR CAA 90 bp | GGTGAGGAAGATGCTCCAGGGCCTTGGACTCTCCCGTTTTCAGCAACAGCAAAGTTATGCCTTTGCAGGTaGGCGGAGGTGCTGACCATC | + |
|
Preference number: 5 (lower is better) Translates to: GEEDAPGPWTLPFSATAKLCLCR*AEVLTI Trigger: GATGGTCAGCACCTCCGCCAACCTGCAAAGGCATAA...CTTTGCTGTTGCTGAAAACGGGAGAGTCCAAGGCCCTGGAGCATCTTCCTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS-3UTR CAA 90 bp | GGTGAGGAAGATGCTCCAGGGCCTTGGACTCTCCCGTTTTCAGCAACAGCAAAGTCAGAGCTTCCTGGATaGTCAGTGTCCCTGCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GEEDAPGPWTLPFSATAKSELPG*SVSLLG Trigger: GCCAAGCAGGGACACTGACAATCCAGGAAGCTCTGA...CTTTGCTGTTGCTGAAAACGGGAGAGTCCAAGGCCCTGGAGCATCTTCCTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS GCA 90 bp | TCACACTTGCTCCCACCAAGAGCGAGCCTTCATCACAGGAAAAGCTaGAGACTGACTGGTACGTCAAGGTACCGAAGGGATCCGAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SHLLPPRASLHHRKS*RLTGTSRYRRDPSS Trigger: ACTGCTCGGATCCCTTCGGTACCTTGACGTACCAGTCAGTCTGCAGCTTTTCCTGTGATGAAGGCTCGCTCTTGGTGGGAGCAAGTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CCA 90 bp | TGGAGCCCCTCGCTCTATATCCAGGCTGGCACTCAAATTTACAGCTaGAGTCGTAGGCAAAGGCAGCAATTGGGTGCATACAGGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: WSPSLYIQAGTQIYS*SRRQRQQLGAYRPW Trigger: CCATGGCCTGTATGCACCCAATTGCTGCCTTTGCCTACGACTCCAGCTGTAAATTTGAGTGCCAGCCTGGATATAGAGCGAGGGGCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CCA 90 bp | ACAGAGAAAAGTGCAGCTGCTGTTGTACCCAAAGGTTCCTGTAGATaGGACGCAGTCCATGCTCCCATGGATGGGGATCTCCGGAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TEKSAAAVVPKGSCR*DAVHAPMDGDLRRF Trigger: GAACCTCCGGAGATCCCCATCCATGGGAGCATGGACTGCGTCCCATCTACAGGAACCTTTGGGTACAACAGCAGCTGCACTTTTCTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CCA 90 bp | ACGTCAAGGTACCGAAGGGATCCGAGCAGTTCACCTGGGCTTTACTaGGAACCGGAAACTCTGGACATTGCAACGCTTCACAGAATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TSRYRRDPSSSPGLY*EPETLDIATLHRMG Trigger: CCCCATTCTGTGAAGCGTTGCAATGTCCAGAGTTTCCGGTTCCCAGTAAAGCCCAGGTGAACTGCTCGGATCCCTTCGGTACCTTGACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CCA 90 bp | ACCAAACTCTCCGTGGACATGAGAACAATCCAGGTTGCCTTGCTCTaGGGCGAAGATTCCTGGACACTTGATGGCTTCACACGTGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TKLSVDMRTIQVALL*GEDSWTLDGFTRGR Trigger: CCTCCCACGTGTGAAGCCATCAAGTGTCCAGGAATCTTCGCCCCAGAGCAAGGCAACCTGGATTGTTCTCATGTCCACGGAGAGTTTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS-3UTR CAA 90 bp | GGTGAGGAAGATGCTCCAGGGCCTTGGACTCTCCCGTTTTCAGCAACAGCAAAGTTGTTCTTCTTGTTGTaGGGCTCGTTGTCGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GEEDAPGPWTLPFSATAKLFFLL*GSLSAQ Trigger: CTGGGCCGACAACGAGCCCAACAACAAGAAGAACAA...CTTTGCTGTTGCTGAAAACGGGAGAGTCCAAGGCCCTGGAGCATCTTCCTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS-3UTR CAA 90 bp | CATCCCCTTAAACTAGAGGTCTGCCTGCCCACCAACATTGCTACTCTGCAATCCATGCACTCCCCTTGGTaGCTGCAGGACATGTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HPLKLEVCLPTNIATLQSMHSPW*LQDMSW Trigger: CCAGGACATGTCCTGCAGCAACCAAGGGGAGTGCAT...GGATTGCAGAGTAGCAATGTTGGTGGGCAGGCAGACCTCTAGTTTAAGGGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS CCA 90 bp | ACTGACTGGTACGTCAAGGTACCGAAGGGATCCGAGCAGTTCACCTaGGCTTTACTGGGAACCGGAAACTCTGGACATTGCAACGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TDWYVKVPKGSEQFT*ALLGTGNSGHCNAS Trigger: TGAAGCGTTGCAATGTCCAGAGTTTCCGGTTCCCAGTAAAGCCCAGGTGAACTGCTCGGATCCCTTCGGTACCTTGACGTACCAGTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR CAA 90 bp | CATCCCCTTAAACTAGAGGTCTGCCTGCCCACCAACATTGCTACTCTGCAATCCAAGGTGCACTGTGAGTaGAAGGAGAACTCCCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HPLKLEVCLPTNIATLQSKVHCE*KENSPR Trigger: CCTGGGGGAGTTCTCCTTCAACTCACAGTGCACCTT...GGATTGCAGAGTAGCAATGTTGGTGGGCAGGCAGACCTCTAGTTTAAGGGGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS CCA 90 bp | TTTTCCACACTCCTTGACGTATTCACACTCTGGCCCATAGAAGCCTaGGTAGCAGGAGCAGGTATAGCTCCCAATGGTCTCGATGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: FSTLLDVFTLWPIEA*VAGAGIAPNGLDAL Trigger: GAGTGCATCGAGACCATTGGGAGCTATACCTGCTCCTGCTACCCAGGCTTCTATGGGCCAGAGTGTGAATACGTCAAGGAGTGTGGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR CAA 90 bp | GGAAAGTCTGCAGTCAGATGTGACGTCTTGGCTCTGTTCCAGATCTTCTGTGTCTTCCAGGCTCTGACATaGCACAGCGTCACACTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: GKSAVRCDVLALFQIFCVFQALT*HSVTLR Trigger: CCGAAGTGTGACGCTGTGCAATGTCAGAGCCTGGAA...GACACAGAAGATCTGGAACAGAGCCAAGACGTCACATCTGACTGCAGACTTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR CAA 90 bp | AACCTCAGCAAATGCCCAAATGCCATGGAGTTACAGTCAAGTGTGACAGGAAACGGTGTTGGCAGGACATaGTGCCCTGTCCAGGAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: NLSKCPNAMELQSSVTGNGVGRT*CPVQES Trigger: CGACTCCTGGACAGGGCACAATGTCCTGCCAACACC...GTTTCCTGTCACACTTGACTGTAACTCCATGGCATTTGGGCATTTGCTGAGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR CAA 90 bp | TGCCCAAATGCCATGGAGTTACAGTCAAGTGTGACAGGAAACTTGACACTTGCAGCTTCCCAGGTGGTGTaGGCAGGACATTGTGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: CPNAMELQSSVTGNLTLAASQVV*AGHCAL Trigger: CAGGGCACAATGTCCTGCCAACACCACCTGGGAAGC...TGCAAGTGTCAAGTTTCCTGTCACACTTGACTGTAACTCCATGGCATTTGGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CCA 90 bp | TTGAGGGATGTTGACTTTTCCACACTCCTTGACGTATTCACACTCTaGCCCATAGAAGCCTGGGTAGCAGGAGCAGGTATAGCTCCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: LRDVDFSTLLDVFTL*PIEAWVAGAGIAPN Trigger: ATTGGGAGCTATACCTGCTCCTGCTACCCAGGCTTCTATGGGCCAGAGTGTGAATACGTCAAGGAGTGTGGAAAAGTCAACATCCCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS-3UTR CAA 90 bp | ATGCCCAAATGCCATGGAGTTACAGTCAAGTGTGACAGGAAACTTGACACTTGCGGTTCATCATTCCACTaGCCAGGGGCCGAGTTACTC | + |
|
Preference number: 5 (lower is better) Translates to: MPKCHGVTVKCDRKLDTCGSSFH*PGAELL Trigger: GAGTAACTCGGCCCCTGGCAAGTGGAATGATGAACC...GCAAGTGTCAAGTTTCCTGTCACACTTGACTGTAACTCCATGGCATTTGGGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS-3UTR CAA 90 bp | AACCTCAGCAAATGCCCAAATGCCATGGAGTTACAGTCAAGTGTGACAGGAAACGGCATCTTATCACACTaGCTCCCACCAAGAGCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: NLSKCPNAMELQSSVTGNGILSH*LPPRAS Trigger: GCTCGCTCTTGGTGGGAGCAAGTGTGATAAGATGCC...GTTTCCTGTCACACTTGACTGTAACTCCATGGCATTTGGGCATTTGCTGAGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS-3UTR CAA 90 bp | ATGCCCAAATGCCATGGAGTTACAGTCAAGTGTGACAGGAAACTTGACACTTGCAGTGATGTTATGCCTTaGCAGGTTGGCGGAGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: MPKCHGVTVKCDRKLDTCSDVMP*QVGGGA Trigger: AGCACCTCCGCCAACCTGCAAAGGCATAACATCACT...GCAAGTGTCAAGTTTCCTGTCACACTTGACTGTAACTCCATGGCATTTGGGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS GCA 90 bp | GCCTCCTACAGAACACCCGTGAGTTATTCCATGAGTATGCCTTTGTaGTGTAGTTATAGGTCCACGCAGCCACTTCCTTCTGATTTACAA | + |
|
Preference number: 5 (lower is better) Translates to: ASYRTPVSYSMSMPL*CSYRSTQPLPSDLQ Trigger: TTGTAAATCAGAAGGAAGTGGCTGCGTGGACCTATAACTACAGCACAAAGGCATACTCATGGAATAACTCACGGGTGTTCTGTAGGAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS-3UTR CAA 90 bp | TCTGTGGTCAGGGGATATACGACATACATTTGTGCTTTCACTGGAAGGTCCAGCTCCATGAGTATGCCTTaGTGCTGTAGTTATAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SVVRGYTTYICAFTGRSSSMSMP*CCSYRS Trigger: GGACCTATAACTACAGCACAAAGGCATACTCATGGA...GCTGGACCTTCCAGTGAAAGCACAAATGTATGTCGTATATCCCCTGACCACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS-3UTR CAA 90 bp | TCCTCTGTGGTCAGGGGATATACGACATACATTTGTGCTTTCACTGGAAGGTCCAAGTTTCCCCAGGGATaGGAACAGTTCATTGCTACT | + |
|
Preference number: 5 (lower is better) Translates to: SSVVRGYTTYICAFTGRSKFPQG*EQFIAT Trigger: AGTAGCAATGAACTGTTCCAATCCCTGGGGAAACTT...GGACCTTCCAGTGAAAGCACAAATGTATGTCGTATATCCCCTGACCACAGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS-3UTR CAA 90 bp | GAGTTATTTATACATCCAAACAATGATCTTTGGGTGCTTTGGTGGAGGGAAAGTACTGAACCAGATGAGTaGAGCCCCTCCCAGGATCAC | + |
|
Preference number: 5 (lower is better) Translates to: ELFIHPNNDLWVLWWRESTEPDE*SPSQDH Trigger: GTGATCCTGGGAGGGGCTCAACTCATCTGGTTCAGT...ACTTTCCCTCCACCAAAGCACCCAAAGATCATTGTTTGGATGTATAAATAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS-3UTR CAA 90 bp | TTGAGTTATTTATACATCCAAACAATGATCTTTGGGTGCTTTGGTGGAGGGAAACTCGATGCACTCCCCTaGGTTGCTGCAGGACATGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSYLYIQTMIFGCFGGGKLDALP*VAAGHV Trigger: GACATGTCCTGCAGCAACCAAGGGGAGTGCATCGAG...TTTCCCTCCACCAAAGCACCCAAAGATCATTGTTTGGATGTATAAATAACTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS-3UTR CAA 90 bp | TTGAGTTATTTATACATCCAAACAATGATCTTTGGGTGCTTTGGTGGAGGGAAATGTCAGTGTCCCTGCTaGGCAGGTTGGCATGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: LSYLYIQTMIFGCFGGGKCQCPC*AGWHGI Trigger: GATGCCATGCCAACCTGCCAAGCAGGGACACTGACA...TTTCCCTCCACCAAAGCACCCAAAGATCATTGTTTGGATGTATAAATAACTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS TCA 90 bp | AATCCAGTCTTTCCGGTCCAGATAGATAAAATCCTTCATCGCACATaGACTGGCATGTGGATTTGTAGGTGGAATTCCCAAGAGGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: NPVFPVQIDKILHRT*TGMWICRWNSQEAE Trigger: TTCAGCCTCTTGGGAATTCCACCTACAAATCCACATGCCAGTTCATGTGCGATGAAGGATTTTATCTATCTGGACCGGAAAGACTGGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS TCA 72 bp | CAGCTCGTAGCCCTCAGCACAGCTGAAGGTGCACTGTaGGTTGAAGGAGAACTCCCCCAGGGGATGGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: QLVALSTAEGAL*VEGELPQGMAA Trigger: TGCAGCCATCCCCTGGGGGAGTTCTCCTTCAACTCACAGTGCACCTTCAGCTGTGCTGAGGGCTACGAGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS TCA 72 bp | GGTTGCCTTGCTCTGGGGCGAAGATTCCTGGACACTTaGTGGCTTCACACGTGGGAGGGGTGCCTGTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: GCLALGRRFLDT*WLHTWEGCLSS Trigger: ACTGGACAGGCACCCCTCCCACGTGTGAAGCCATCAAGTGTCCAGGAATCTTCGCCCCAGAGCAAGGCAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS CAA 72 bp | AGGTTGCCTTGCTCTGGGGCGAAGATTCCTGGACACTaGATGGCTTCACACGTGGGAGGGGTGCCTGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RLPCSGAKIPGH*MASHVGGVPVQ Trigger: CTGGACAGGCACCCCTCCCACGTGTGAAGCCATCAAGTGTCCAGGAATCTTCGCCCCAGAGCAAGGCAACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS CAA 90 bp | CGAGCAGTTCACCTGGGCTTTACTGGGAACCGGAAACTCTGGACATaGCAACGCTTCACAGAATGGGGCTGGGGCTGTCCACTGCCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: RAVHLGFTGNRKLWT*QRFTEWGWGCPLPG Trigger: TCCGGGCAGTGGACAGCCCCAGCCCCATTCTGTGAAGCGTTGCAATGTCCAGAGTTTCCGGTTCCCAGTAAAGCCCAGGTGAACTGCTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS GCA 72 bp | GGTAGCAGGAGCAGGTATAGCTCCCAATGGTCTCGATaGACTCCCCTTGGTTGCTGCAGGACATGTCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GSRSRYSSQWSR*TPLGCCRTCPG Trigger: GCCAGGACATGTCCTGCAGCAACCAAGGGGAGTGCATCGAGACCATTGGGAGCTATACCTGCTCCTGCTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS GCA 72 bp | CAGGGCATCGGACTGCTGGGGCAGGAAGTGATGTTATaGCTTTGCAGGTTGGCGGAGGTGCTGACCATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: QGIGLLGQEVML*LCRLAEVLTIF Trigger: GAAGATGGTCAGCACCTCCGCCAACCTGCAAAGGCATAACATCACTTCCTGCCCCAGCAGTCCGATGCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CCA 72 bp | AACCGGAAACTCTGGACATTGCAACGCTTCACAGAATaGGGCTGGGGCTGTCCACTGCCCGGAGTCAGCACA | + |
|
Preference number: 6 (lower is better) Translates to: NRKLWTLQRFTE*GWGCPLPGVST Trigger: TGTGCTGACTCCGGGCAGTGGACAGCCCCAGCCCCATTCTGTGAAGCGTTGCAATGTCCAGAGTTTCCGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CCA 72 bp | ACAATCCAGGTTGCCTTGCTCTGGGGCGAAGATTCCTaGACACTTGATGGCTTCACACGTGGGAGGGGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TIQVALLWGEDS*TLDGFTRGRGA Trigger: GGCACCCCTCCCACGTGTGAAGCCATCAAGTGTCCAGGAATCTTCGCCCCAGAGCAAGGCAACCTGGATTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CAA 72 bp | GCAGGTATAGCTCCCAATGGTCTCGATGCACTCCCCTaGGTTGCTGCAGGACATGTCCTGGCAGGAGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: AGIAPNGLDALP*VAAGHVLAGGC Trigger: ACAGCCTCCTGCCAGGACATGTCCTGCAGCAACCAAGGGGAGTGCATCGAGACCATTGGGAGCTATACCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS CAA 90 bp | GCTGGCACTCAAATTTACAGCTGGAGTCGTAGGCAAAGGCAGCAATaGGGTGCATACAGGCCATGGTTCCATGGGGAGGGGCTTCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: AGTQIYSWSRRQRQQ*GAYRPWFHGEGLPG Trigger: GCCTGGAAGCCCCTCCCCATGGAACCATGGCCTGTATGCACCCAATTGCTGCCTTTGCCTACGACTCCAGCTGTAAATTTGAGTGCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CAA 90 bp | CATGGATCCATTCTCAGGACTGAGCATAGGGGCACAGGACACAGCTaGACATTCGGGAGGAGCCCCATTCCAGTGTCCAGTAGCCAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: HGSILRTEHRGTGHS*TFGRSPIPVSSSQA Trigger: TGCCTGGCTACTGGACACTGGAATGGGGCTCCTCCCGAATGTCAAGCTGTGTCCTGTGCCCCTATGCTCAGTCCTGAGAATGGATCCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CAA 90 bp | GAACAATCCAGGTTGCCTTGCTCTGGGGCGAAGATTCCTGGACACTaGATGGCTTCACACGTGGGAGGGGTGCCTGTCCAGTGTCCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: EQSRLPCSGAKIPGH*MASHVGGVPVQCPD Trigger: ATCTGGACACTGGACAGGCACCCCTCCCACGTGTGAAGCCATCAAGTGTCCAGGAATCTTCGCCCCAGAGCAAGGCAACCTGGATTGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS GCA 72 bp | TATAGCTCCCAATGGTCTCGATGCACTCCCCTTGGTTaGTGCAGGACATGTCCTGGCAGGAGGCTGTGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: YSSQWSRCTPLG*CRTCPGRRLCS Trigger: GCTACACAGCCTCCTGCCAGGACATGTCCTGCAGCAACCAAGGGGAGTGCATCGAGACCATTGGGAGCTATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS GCA 72 bp | AGGTTGGCAGTGGTTCACTCCACTGACCAGAGCCAGTaGAGTGGAGTGTGTTGGAGCCCCTCGCTCTATATC | + |
|
Preference number: 6 (lower is better) Translates to: RLAVVHSTDQSQ*SGVCWSPSLYI Trigger: GATATAGAGCGAGGGGCTCCAACACACTCCACTGCACTGGCTCTGGTCAGTGGAGTGAACCACTGCCAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS GCA 72 bp | ACCTGGGCTTTACTGGGAACCGGAAACTCTGGACATTaGAACGCTTCACAGAATGGGGCTGGGGCTGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: TWALLGTGNSGH*NASQNGAGAVH Trigger: GTGGACAGCCCCAGCCCCATTCTGTGAAGCGTTGCAATGTCCAGAGTTTCCGGTTCCCAGTAAAGCCCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CCA 72 bp | AGAAGCCTGGGTAGCAGGAGCAGGTATAGCTCCCAATaGTCTCGATGCACTCCCCTTGGTTGCTGCAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: RSLGSRSRYSSQ*SRCTPLGCCRT Trigger: TGTCCTGCAGCAACCAAGGGGAGTGCATCGAGACCATTGGGAGCTATACCTGCTCCTGCTACCCAGGCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CCA 72 bp | CGGAGGTTCACACGCAATAGCTTCACAGGTTGGCAGTaGTTCACTCCACTGACCAGAGCCAGTGCAGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RRFTRNSFTGWQ*FTPLTRASAVE Trigger: CTCCACTGCACTGGCTCTGGTCAGTGGAGTGAACCACTGCCAACCTGTGAAGCTATTGCGTGTGAACCTCCG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CAA 72 bp | CTGCTGGGGCAGGAAGTGATGTTATGCCTTTGCAGGTaGGCGGAGGTGCTGACCATCTTCCAGACACTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LLGQEVMLCLCR*AEVLTIFQTLC Trigger: GCACAGTGTCTGGAAGATGGTCAGCACCTCCGCCAACCTGCAAAGGCATAACATCACTTCCTGCCCCAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CAA 90 bp | GGCATCGGACTGCTGGGGCAGGAAGTGATGTTATGCCTTTGCAGGTaGGCGGAGGTGCTGACCATCTTCCAGACACTGTGCATTCCACAT | + |
|
Preference number: 6 (lower is better) Translates to: GIGLLGQEVMLCLCR*AEVLTIFQTLCIPH Trigger: ATGTGGAATGCACAGTGTCTGGAAGATGGTCAGCACCTCCGCCAACCTGCAAAGGCATAACATCACTTCCTGCCCCAGCAGTCCGATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS GCA 72 bp | ATCGGACTGCTGGGGCAGGAAGTGATGTTATGCCTTTaGAGGTTGGCGGAGGTGCTGACCATCTTCCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: IGLLGQEVMLCL*RLAEVLTIFQT Trigger: TGTCTGGAAGATGGTCAGCACCTCCGCCAACCTGCAAAGGCATAACATCACTTCCTGCCCCAGCAGTCCGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CCA 72 bp | AAGGTTCCTGTAGATGGGACGCAGTCCATGCTCCCATaGATGGGGATCTCCGGAGGTTCACACGCAATAGCT | + |
|
Preference number: 6 (lower is better) Translates to: KVPVDGTQSMLP*MGISGGSHAIA Trigger: AGCTATTGCGTGTGAACCTCCGGAGATCCCCATCCATGGGAGCATGGACTGCGTCCCATCTACAGGAACCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CCA 72 bp | AGTGCAGCTGCTGTTGTACCCAAAGGTTCCTGTAGATaGGACGCAGTCCATGCTCCCATGGATGGGGATCTC | + |
|
Preference number: 6 (lower is better) Translates to: SAAAVVPKGSCR*DAVHAPMDGDL Trigger: GAGATCCCCATCCATGGGAGCATGGACTGCGTCCCATCTACAGGAACCTTTGGGTACAACAGCAGCTGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CCA 72 bp | AAACTCTGGACATTGCAACGCTTCACAGAATGGGGCTaGGGCTGTCCACTGCCCGGAGTCAGCACACTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: KLWTLQRFTEWG*GCPLPGVSTLN Trigger: ATTCAGTGTGCTGACTCCGGGCAGTGGACAGCCCCAGCCCCATTCTGTGAAGCGTTGCAATGTCCAGAGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS TCA 72 bp | ACAAGCTCAGAGATCAAAGCACTGAACCAGATGAGTTaGGCCCCTCCCAGGATCACACTCCGGAGTCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: TSSEIKALNQMS*APPRITLRSLG Trigger: GCCAAGACTCCGGAGTGTGATCCTGGGAGGGGCTCAACTCATCTGGTTCAGTGCTTTGATCTCTGAGCTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS GCA 72 bp | CTCCCACCAAGAGCGAGCCTTCATCACAGGAAAAGCTaGAGACTGACTGGTACGTCAAGGTACCGAAGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LPPRASLHHRKS*RLTGTSRYRRD Trigger: ATCCCTTCGGTACCTTGACGTACCAGTCAGTCTGCAGCTTTTCCTGTGATGAAGGCTCGCTCTTGGTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CCA 72 bp | CTCCTTGACGTATTCACACTCTGGCCCATAGAAGCCTaGGTAGCAGGAGCAGGTATAGCTCCCAATGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLDVFTLWPIEA*VAGAGIAPNGL Trigger: GAGACCATTGGGAGCTATACCTGCTCCTGCTACCCAGGCTTCTATGGGCCAGAGTGTGAATACGTCAAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CCA 72 bp | AAATTTACAGCTGGAGTCGTAGGCAAAGGCAGCAATTaGGTGCATACAGGCCATGGTTCCATGGGGAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: KFTAGVVGKGSN*VHTGHGSMGRG Trigger: GCCCCTCCCCATGGAACCATGGCCTGTATGCACCCAATTGCTGCCTTTGCCTACGACTCCAGCTGTAAATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CCA 72 bp | TACCGAAGGGATCCGAGCAGTTCACCTGGGCTTTACTaGGAACCGGAAACTCTGGACATTGCAACGCTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: YRRDPSSSPGLY*EPETLDIATLH Trigger: GTGAAGCGTTGCAATGTCCAGAGTTTCCGGTTCCCAGTAAAGCCCAGGTGAACTGCTCGGATCCCTTCGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CCA 72 bp | TACGTCAAGGTACCGAAGGGATCCGAGCAGTTCACCTaGGCTTTACTGGGAACCGGAAACTCTGGACATTGC | + |
|
Preference number: 6 (lower is better) Translates to: YVKVPKGSEQFT*ALLGTGNSGHC Trigger: GCAATGTCCAGAGTTTCCGGTTCCCAGTAAAGCCCAGGTGAACTGCTCGGATCCCTTCGGTACCTTGACGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CAA 72 bp | CAAATTTACAGCTGGAGTCGTAGGCAAAGGCAGCAATaGGGTGCATACAGGCCATGGTTCCATGGGGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QIYSWSRRQRQQ*GAYRPWFHGEG Trigger: CCCCTCCCCATGGAACCATGGCCTGTATGCACCCAATTGCTGCCTTTGCCTACGACTCCAGCTGTAAATTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CAA 90 bp | GCCAACACCAAACTCTCCGTGGACATGAGAACAATCCAGGTTGCCTaGCTCTGGGGCGAAGATTCCTGGACACTTGATGGCTTCACACGT | + |
|
Preference number: 6 (lower is better) Translates to: ANTKLSVDMRTIQVA*LWGEDSWTLDGFTR Trigger: ACGTGTGAAGCCATCAAGTGTCCAGGAATCTTCGCCCCAGAGCAAGGCAACCTGGATTGTTCTCATGTCCACGGAGAGTTTGGTGTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CCA 72 bp | CAATCACAGACAAATGCCGGAGCTCCCCGGCTTTGTTaGGAGATGTATTACGCCATGGCCCAAGCTCAACAT | + |
|
Preference number: 6 (lower is better) Translates to: QSQTNAGAPRLC*EMYYAMAQAQH Trigger: ATGTTGAGCTTGGGCCATGGCGTAATACATCTCCCAACAAAGCCGGGGAGCTCCGGCATTTGTCTGTGATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161152.8 |
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| CDS CCA 72 bp | TCCGTGGACATGAGAACAATCCAGGTTGCCTTGCTCTaGGGCGAAGATTCCTGGACACTTGATGGCTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: SVDMRTIQVALL*GEDSWTLDGFT Trigger: TGTGAAGCCATCAAGTGTCCAGGAATCTTCGCCCCAGAGCAAGGCAACCTGGATTGTTCTCATGTCCACGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS CAA 72 bp | TACAAGCTCAGAGATCAAAGCACTGAACCAGATGAGTaGAGCCCCTCCCAGGATCACACTCCGGAGTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: YKLRDQSTEPDE*SPSQDHTPESW Trigger: CCAAGACTCCGGAGTGTGATCCTGGGAGGGGCTCAACTCATCTGGTTCAGTGCTTTGATCTCTGAGCTTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS CAA 72 bp | AAACTCTCCGTGGACATGAGAACAATCCAGGTTGCCTaGCTCTGGGGCGAAGATTCCTGGACACTTGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: KLSVDMRTIQVA*LWGEDSWTLDG Trigger: GCCATCAAGTGTCCAGGAATCTTCGCCCCAGAGCAAGGCAACCTGGATTGTTCTCATGTCCACGGAGAGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS TCA 72 bp | GATCCCAGTAGCTCAAAGTCCTCATTGCAGGAGAAGTaGCAGATAGAGCCAACACCAAACTCTCCGTGGACA | + |
|
Preference number: 6 (lower is better) Translates to: DPSSSKSSLQEK*QIEPTPNSPWT Trigger: TGTCCACGGAGAGTTTGGTGTTGGCTCTATCTGTCACTTCTCCTGCAATGAGGACTTTGAGCTACTGGGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
||
| CDS GCA 72 bp | ATTCCAGTGTCCAGTAGCCAGGCATCTTATCACACTTaGTCCCACCAAGAGCGAGCCTTCATCACAGGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: IPVSSSQASYHT*SHQERAFITGK Trigger: TTTTCCTGTGATGAAGGCTCGCTCTTGGTGGGAGCAAGTGTGATAAGATGCCTGGCTACTGGACACTGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CCA 72 bp | GTTGACTTTTCCACACTCCTTGACGTATTCACACTCTaGCCCATAGAAGCCTGGGTAGCAGGAGCAGGTATA | + |
|
Preference number: 6 (lower is better) Translates to: VDFSTLLDVFTL*PIEAWVAGAGI Trigger: TATACCTGCTCCTGCTACCCAGGCTTCTATGGGCCAGAGTGTGAATACGTCAAGGAGTGTGGAAAAGTCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CCA 72 bp | TCGCTCTATATCCAGGCTGGCACTCAAATTTACAGCTaGAGTCGTAGGCAAAGGCAGCAATTGGGTGCATAC | + |
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Preference number: 6 (lower is better) Translates to: SLYIQAGTQIYS*SRRQRQQLGAY Trigger: GTATGCACCCAATTGCTGCCTTTGCCTACGACTCCAGCTGTAAATTTGAGTGCCAGCCTGGATATAGAGCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS CAA 90 bp | AGTGCCTCCTACAGAACACCCGTGAGTTATTCCATGAGTATGCCTTaGTGCTGTAGTTATAGGTCCACGCAGCCACTTCCTTCTGATTTA | + |
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Preference number: 6 (lower is better) Translates to: SASYRTPVSYSMSMP*CCSYRSTQPLPSDL Trigger: TAAATCAGAAGGAAGTGGCTGCGTGGACCTATAACTACAGCACAAAGGCATACTCATGGAATAACTCACGGGTGTTCTGTAGGAGGCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS GCA 72 bp | AGAACACCCGTGAGTTATTCCATGAGTATGCCTTTGTaGTGTAGTTATAGGTCCACGCAGCCACTTCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: RTPVSYSMSMPL*CSYRSTQPLPS Trigger: AGAAGGAAGTGGCTGCGTGGACCTATAACTACAGCACAAAGGCATACTCATGGAATAACTCACGGGTGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS TCA 72 bp | CGATTTCATTCTTATTCTGGATGGCCACTAAGTCTGTaGAGTGCCTCCTACAGAACACCCGTGAGTTATTCC | + |
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Preference number: 6 (lower is better) Translates to: RFHSYSGWPLSL*SASYRTPVSYS Trigger: GGAATAACTCACGGGTGTTCTGTAGGAGGCACTTCACAGACTTAGTGGCCATCCAGAATAAGAATGAAATCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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| CDS TCA 72 bp | TTTCCGGTCCAGATAGATAAAATCCTTCATCGCACATaGACTGGCATGTGGATTTGTAGGTGGAATTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: FPVQIDKILHRT*TGMWICRWNSQ Trigger: TTGGGAATTCCACCTACAAATCCACATGCCAGTTCATGTGCGATGAAGGATTTTATCTATCTGGACCGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162746.2 |
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