Pregenerated sensors for SELL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026581Ensembl transcript IDs: ENSMUST00000027871.13, ENSMUST00000097491.10, ENSMUST00000192047.6, ENSMUST00000195358.2
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAAGGCTTCGGGATGCCCACATGGACCTTCCTGGCTCATCGTTGCTaGGCCAGGAGAACTGCCTTTGAATGGCTTGCCTCCCCTGCTTCT | + |
|
Preference number: 1 (lower is better) Translates to: KGFGMPTWTFLAHRC*ARRTAFEWLASPAS Trigger: AGAAGCAGGGGAGGCAAGCCATTCAAAGGCAGTTCTCCTGGCTCAGCAACGATGAGCCAGGAAGGTCCATGTGGGCATCCCGAAGCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR GCA 90 bp | CCCACTCTCCACCCTCCCATTAGTCAGAGAACAAAGGCTTCGGGATaGCCACATGGACCTTCCTGGCTCATCGTTGCTGAGCCAGGAGAA | + |
|
Preference number: 1 (lower is better) Translates to: PTLHPPISQRTKASG*PHGPSWLIVAEPGE Trigger: TTCTCCTGGCTCAGCAACGATGAGCCAGGAAGGTCCATGTGGGCATCCCGAAGCCTTTGTTCTCTGACTAATGGGAGGGTGGAGAGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR CCA 90 bp | ATTAGTCAGAGAACAAAGGCTTCGGGATGCCCACATGGACCTTCCTaGCTCATCGTTGCTGAGCCAGGAGAACTGCCTTTGAATGGCTTG | + |
|
Preference number: 1 (lower is better) Translates to: ISQRTKASGCPHGPS*LIVAEPGELPLNGL Trigger: CAAGCCATTCAAAGGCAGTTCTCCTGGCTCAGCAACGATGAGCCAGGAAGGTCCATGTGGGCATCCCGAAGCCTTTGTTCTCTGACTAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR TCA 90 bp | GAATCTGACTTCACAGGCCAACATAGCCCAATGAGGAAGAGTTGCTaGAAGCTTCCCTGCACCCTGACAGAGGCTGACCAGTCTGTATCA | + |
|
Preference number: 1 (lower is better) Translates to: ESDFTGQHSPMRKSC*KLPCTLTEADQSVS Trigger: TGATACAGACTGGTCAGCCTCTGTCAGGGTGCAGGGAAGCTTTCAGCAACTCTTCCTCATTGGGCTATGTTGGCCTGTGAAGTCAGATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR TCA 90 bp | GACCTGGAGCCCTTTCCCATTGCTCCTCTTCTCCAGTTGTCTTTGTaGGCTTACAGGCATTTGGGTTACATCCTTGACTCAATCCTGTAT | + |
|
Preference number: 1 (lower is better) Translates to: DLEPFPIAPLLQLSL*AYRHLGYILDSILY Trigger: ATACAGGATTGAGTCAAGGATGTAACCCAAATGCCTGTAAGCTCACAAAGACAACTGGAGAAGAGGAGCAATGGGAAAGGGCTCCAGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR TCA 90 bp | ACTATACTTCTCCAAAGGATGAACCCTAAGGTGTGTGAGCATGATTaGCACCTGCTGGTAGACACACAGGATGAAAGGGCTTTGCAATTG | + |
|
Preference number: 1 (lower is better) Translates to: TILLQRMNPKVCEHD*HLLVDTQDERALQL Trigger: CAATTGCAAAGCCCTTTCATCCTGTGTGTCTACCAGCAGGTGTCAATCATGCTCACACACCTTAGGGTTCATCCTTTGGAGAAGTATAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR GCA 90 bp | GGAACTCTCTATCTAGACCAGGTTAGCCTTGAACTCACAGAGTTCTaGTTGCCTCAGCAAAGTCGTATAAGCAAAGTTCATGAGTTCCAG | + |
|
Preference number: 1 (lower is better) Translates to: GTLYLDQVSLELTEF*LPQQSRISKVHEFQ Trigger: CTGGAACTCATGAACTTTGCTTATACGACTTTGCTGAGGCAAGCAGAACTCTGTGAGTTCAAGGCTAACCTGGTCTAGATAGAGAGTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR GCA 90 bp | TTCTTTGTTCCTATCCCCAGTGTGGCCACATGGAATATCTCTCTCTaGTTTTTACTATTCCTGGGAGAGGATACACACAAGGCCTTGTGT | + |
|
Preference number: 1 (lower is better) Translates to: FFVPIPSVATWNISL*FLLFLGEDTHKALC Trigger: ACACAAGGCCTTGTGTGTATCCTCTCCCAGGAATAGTAAAAAGCAGAGAGAGATATTCCATGTGGCCACACTGGGGATAGGAACAAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR CCA 90 bp | ACTCACAATTCACCTCAAATCCCATTAGAACAAAACCTTACAGGATaGACAGGTACCTGTGATGGTGGGTTGGGTGCAGGAGTAGAGAAA | + |
|
Preference number: 1 (lower is better) Translates to: THNSPQIPLEQNLTG*TGTCDGGLGAGVEK Trigger: TTTCTCTACTCCTGCACCCAACCCACCATCACAGGTACCTGTCCATCCTGTAAGGTTTTGTTCTAATGGGATTTGAGGTGAATTGTGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR TCA 90 bp | CAAAGACCATGGCATAGTACACACTTCATGAGCTTTAGAGCACTGTaGTGGTCTTTCCATCTTGGCTTTTGTTTAAGCCTGCGAGATTTG | + |
|
Preference number: 1 (lower is better) Translates to: QRPWHSTHFMSFRAL*WSFHLGFCLSLRDL Trigger: CAAATCTCGCAGGCTTAAACAAAAGCCAAGATGGAAAGACCATCACAGTGCTCTAAAGCTCATGAAGTGTGTACTATGCCATGGTCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR CCA 90 bp | CCATTGCTCCTCTTCTCCAGTTGTCTTTGTGAGCTTACAGGCATTTaGGTTACATCCTTGACTCAATCCTGTATTAAGAATAAAGGAGAT | + |
|
Preference number: 1 (lower is better) Translates to: PLLLFSSCLCELTGI*VTSLTQSCIKNKGD Trigger: ATCTCCTTTATTCTTAATACAGGATTGAGTCAAGGATGTAACCCAAATGCCTGTAAGCTCACAAAGACAACTGGAGAAGAGGAGCAATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR CCA 90 bp | AAGACCACAATGCTCTTATACATGTACCTAAGACCACAATGCTCTTaGATGCCACAAACACAGATCTTTGACACTAAAGATGATATTCAC | + |
|
Preference number: 1 (lower is better) Translates to: KTTMLLYMYLRPQCS*MPQTQIFDTKDDIH Trigger: GTGAATATCATCTTTAGTGTCAAAGATCTGTGTTTGTGGCATCCAAGAGCATTGTGGTCTTAGGTACATGTATAAGAGCATTGTGGTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR GCA 90 bp | TGGATGCCACAAACACAGATCTTTGACACTAAAGATGATATTCACTaGATCACCAGCTGTTATTTATCTGGTGCTTACTATTTTCCAGTT | + |
|
Preference number: 1 (lower is better) Translates to: WMPQTQIFDTKDDIH*ITSCYLSGAYYFPV Trigger: AACTGGAAAATAGTAAGCACCAGATAAATAACAGCTGGTGATGCAGTGAATATCATCTTTAGTGTCAAAGATCTGTGTTTGTGGCATCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR TCA 90 bp | ATGTGGAGGAAAAATAACAGAGGAGGGACTTTCCTACAAGATCTTTaGATAAGGGAAGATTTGCATAAGCCATATTTAACCAGAATCTTT | + |
|
Preference number: 1 (lower is better) Translates to: MWRKNNRGGTFLQDL*IREDLHKPYLTRIF Trigger: AAAGATTCTGGTTAAATATGGCTTATGCAAATCTTCCCTTATTCAAAGATCTTGTAGGAAAGTCCCTCCTCTGTTATTTTTCCTCCACAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR-3UTR TCA 90 bp | TCACCACCCTCATTTAAAGAGCACTTCCGACCTGGAGCCCTTTCCCATTGCTCCAGATTTTCCCTTCTTTaGTGTTTGGTGGCCATCATG | + |
|
Preference number: 2 (lower is better) Translates to: SPPSFKEHFRPGALSHCSRFSLL*CLVAIM Trigger: CATGATGGCCACCAAACATCAAAGAAGGGAAAATCT...GGAGCAATGGGAAAGGGCTCCAGGTCGGAAGTGCTCTTTAAATGAGGGTGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR-3UTR TCA 90 bp | CTCTGCTTTTTACTATTCCTGGGAGAGGATACACACAAGGCCTTGTGTCTTGGGGGTAGACACACAGGATaGAAGGGCTTTGCAATTGCA | + |
|
Preference number: 2 (lower is better) Translates to: LCFLLFLGEDTHKALCLGGRHTG*KGFAIA Trigger: TGCAATTGCAAAGCCCTTTCATCCTGTGTGTCTACC...CCCAAGACACAAGGCCTTGTGTGTATCCTCTCCCAGGAATAGTAAAAAGCAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR-3UTR CCA 90 bp | GATGTTAGGGAAAGAAAAGGGTGTCACTCCAGCCTGAGCCCAGGAATTTTTCTACCCTTCTTTGATGTTTaGTGGCCATCATGGGGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: DVRERKGCHSSLSPGIFLPFFDV*WPSWGA Trigger: TGCACCCCATGATGGCCACCAAACATCAAAGAAGGG...TAGAAAAATTCCTGGGCTCAGGCTGGAGTGACACCCTTTTCTTTCCCTAACATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| 3UTR CAA 90 bp | CATCCCTGTTACAGAGGAACAGAGATTAGAAGACGCTCGTCTTGTTaGCTTGGTGTTTTCTCACAAGCTCTCAGAAATCTCCTCACACAG | + |
|
Preference number: 2 (lower is better) Translates to: HPCYRGTEIRRRSSC*LGVFSQALRNLLTQ Trigger: CTGTGTGAGGAGATTTCTGAGAGCTTGTGAGAAAACACCAAGCAAACAAGACGAGCGTCTTCTAATCTCTGTTCCTCTGTAACAGGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR CAA 90 bp | ACTCTCTATCTAGACCAGGTTAGCCTTGAACTCACAGAGTTCTGCTaGCCTCAGCAAAGTCGTATAAGCAAAGTTCATGAGTTCCAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: TLYLDQVSLELTEFC*PQQSRISKVHEFQL Trigger: CAGCTGGAACTCATGAACTTTGCTTATACGACTTTGCTGAGGCAAGCAGAACTCTGTGAGTTCAAGGCTAACCTGGTCTAGATAGAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR CAA 90 bp | TCTCTCTGCTTTTTACTATTCCTGGGAGAGGATACACACAAGGCCTaGTGTCTTGGGATATTGCATAGGATAGTGGAGAAGCCCAAGACA | + |
|
Preference number: 2 (lower is better) Translates to: SLCFLLFLGEDTHKA*CLGILHRIVEKPKT Trigger: TGTCTTGGGCTTCTCCACTATCCTATGCAATATCCCAAGACACAAGGCCTTGTGTGTATCCTCTCCCAGGAATAGTAAAAAGCAGAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR-3UTR CCA 90 bp | CTCTGCTTTTTACTATTCCTGGGAGAGGATACACACAAGGCCTTGTGTCTTGGGCTCGTCTTGTTTGCTTaGTGTTTTCTCACAAGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: LCFLLFLGEDTHKALCLGLVLFA*CFLTSS Trigger: AGAGCTTGTGAGAAAACACCAAGCAAACAAGACGAG...CCCAAGACACAAGGCCTTGTGTGTATCCTCTCCCAGGAATAGTAAAAAGCAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR-3UTR CCA 90 bp | CTCTGCTTTTTACTATTCCTGGGAGAGGATACACACAAGGCCTTGTGTCTTGGGTTTGTCTGCTGGCTCTaGTGTCAAAACTTTGTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: LCFLLFLGEDTHKALCLGFVCWL*CQNFVS Trigger: AGAGACAAAGTTTTGACACCAGAGCCAGCAGACAAA...CCCAAGACACAAGGCCTTGTGTGTATCCTCTCCCAGGAATAGTAAAAAGCAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR-3UTR CCA 90 bp | GATAGCCTACAGGTTGGGCAAGTTAAGGAGCAAGTTATAAAAGACATGGTAAGACCCTTCTTTGATGTTTaGTGGCCATCATGGGGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: DSLQVGQVKEQVIKDMVRPFFDV*WPSWGA Trigger: TGCACCCCATGATGGCCACCAAACATCAAAGAAGGG...TCTTACCATGTCTTTTATAACTTGCTCCTTAACTTGCCCAACCTGTAGGCTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| 3UTR-3UTR CCA 90 bp | GTAGAAGATGTTAGGGAAAGAAAAGGGTGTCACTCCAGCCTGAGCCCAGGAATTTCAGCTCCAAGAGAGTaGGTTGTGTTATCATTAACT | + |
|
Preference number: 2 (lower is better) Translates to: VEDVRERKGCHSSLSPGISAPRE*VVLSLT Trigger: AGTTAATGATAACACAACCCACTCTCTTGGAGCTGA...AATTCCTGGGCTCAGGCTGGAGTGACACCCTTTTCTTTCCCTAACATCTTCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| 3UTR-3UTR TCA 90 bp | AATTTGCTGGTAAACTTCAAAAGCATGAGAAGGAGATCTGAAGTCACGGAGTTCAGCTTTAGAGCACTGTaGTGGTCTTTCCATCTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: NLLVNFKSMRRRSEVTEFSFRAL*WSFHLG Trigger: GCCAAGATGGAAAGACCATCACAGTGCTCTAAAGCT...GAACTCCGTGACTTCAGATCTCCTTCTCATGCTTTTGAAGTTTACCAGCAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR-3UTR CCA 90 bp | ATGAGCGAGGGGAAATTAGGAGGAGCTGTTGGTCATGAAGAAATCCTTCCAGATGTCTTTAGCACTTCATaGCTTTCCTTTCACAAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: MSEGKLGGAVGHEEILPDVFSTS*LSFHKG Trigger: TCCTTTGTGAAAGGAAAGCCATGAAGTGCTAAAGAC...ATCTGGAAGGATTTCTTCATGACCAACAGCTCCTCCTAATTTCCCCTCGCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 ENSMUST00000195358.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGTTGGGGACAGCTGTCCTGAATCTTAAATTTAGGTATCTGAGTAGAAGATGTTTCTTTGATGTTTGGTaGCCATCATGGGGTGCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: ELGTAVLNLKFRYLSRRCFFDVW*PSWGAV Trigger: CACTGCACCCCATGATGGCCACCAAACATCAAAGAA...ACATCTTCTACTCAGATACCTAAATTTAAGATTCAGGACAGCTGTCCCCAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| 3UTR-3UTR TCA 90 bp | GTGTTTATGAAACCTCAAAAACTTGGCTTGTTTTCTTGTAAGTGGGTAGAATTGAGCTGTATTCAGTCCTaGGGGCAAGGTCACATAAGT | + |
|
Preference number: 2 (lower is better) Translates to: VFMKPQKLGLFSCKWVELSCIQS*GQGHIS Trigger: ACTTATGTGACCTTGCCCTCAGGACTGAATACAGCT...CAATTCTACCCACTTACAAGAAAACAAGCCAAGTTTTTGAGGTTTCATAAACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR-3UTR CCA 90 bp | AATTTGCTGGTAAACTTCAAAAGCATGAGAAGGAGATCTGAAGTCACGGAGTTCTTAGTTGCTGAGTTGTaGCTGGTTCATATACACCAT | + |
|
Preference number: 2 (lower is better) Translates to: NLLVNFKSMRRRSEVTEFLVAEL*LVHIHH Trigger: ATGGTGTATATGAACCAGCCACAACTCAGCAACTAA...GAACTCCGTGACTTCAGATCTCCTTCTCATGCTTTTGAAGTTTACCAGCAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR-3UTR TCA 90 bp | GATAGCCTACAGGTTGGGCAAGTTAAGGAGCAAGTTATAAAAGACATGGTAAGACTTTGGAGGTGGAAATaGAAGATTTTTGTCGATGTT | + |
|
Preference number: 2 (lower is better) Translates to: DSLQVGQVKEQVIKDMVRLWRWK*KIFVDV Trigger: AACATCGACAAAAATCTTTCATTTCCACCTCCAAAG...TCTTACCATGTCTTTTATAACTTGCTCCTTAACTTGCCCAACCTGTAGGCTATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| 3UTR-3UTR CCA 90 bp | TTTCCCAACTTGAATAGAGCACTGTTCTTTGGAGGTGGAAATGAAAGATTTTTGGTCTTTAGCACTTCATaGCTTTCCTTTCACAAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: FPNLNRALFFGGGNERFLVFSTS*LSFHKG Trigger: TCCTTTGTGAAAGGAAAGCCATGAAGTGCTAAAGAC...CAAAAATCTTTCATTTCCACCTCCAAAGAACAGTGCTCTATTCAAGTTGGGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| 3UTR-3UTR CCA 90 bp | GTGTTTATGAAACCTCAAAAACTTGGCTTGTTTTCTTGTAAGTGGGTAGAATTGTCAGCTCCAAGAGAGTaGGTTGTGTTATCATTAACT | + |
|
Preference number: 2 (lower is better) Translates to: VFMKPQKLGLFSCKWVELSAPRE*VVLSLT Trigger: AGTTAATGATAACACAACCCACTCTCTTGGAGCTGA...CAATTCTACCCACTTACAAGAAAACAAGCCAAGTTTTTGAGGTTTCATAAACAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR TCA 72 bp | GGGATGCCCACATGGACCTTCCTGGCTCATCGTTGCTaGGCCAGGAGAACTGCCTTTGAATGGCTTGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: GMPTWTFLAHRC*ARRTAFEWLAS Trigger: GGAGGCAAGCCATTCAAAGGCAGTTCTCCTGGCTCAGCAACGATGAGCCAGGAAGGTCCATGTGGGCATCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR GCA 72 bp | TTTAAAGAGCACTTCCGACCTGGAGCCCTTTCCCATTaGTCCTCTTCTCCAGTTGTCTTTGTGAGCTTACAG | + |
|
Preference number: 3 (lower is better) Translates to: FKEHFRPGALSH*SSSPVVFVSLQ Trigger: CTGTAAGCTCACAAAGACAACTGGAGAAGAGGAGCAATGGGAAAGGGCTCCAGGTCGGAAGTGCTCTTTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR GCA 72 bp | GTGATAATAAGCCTGGCATACAGGGTGTCAGTAACTTaGTCAAACCACATGGCACAGGGAAGCCACAGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: VIISLAYRVSVT*SNHMAQGSHSV Trigger: AACACTGTGGCTTCCCTGTGCCATGTGGTTTGAGCAAGTTACTGACACCCTGTATGCCAGGCTTATTATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR CCA 72 bp | TCACCTCAAATCCCATTAGAACAAAACCTTACAGGATaGACAGGTACCTGTGATGGTGGGTTGGGTGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SPQIPLEQNLTG*TGTCDGGLGAG Trigger: TCCTGCACCCAACCCACCATCACAGGTACCTGTCCATCCTGTAAGGTTTTGTTCTAATGGGATTTGAGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGCTTTTTACTATTCCTGGGAGAGGATACACACAAGGCCTTGTGTCTTGGGCAGGGTAGTGAACTCTaGAGTCTGTTCTTGTGCACT | + |
|
Preference number: 3 (lower is better) Translates to: LCFLLFLGEDTHKALCLGQGSEL*SLFLCT Trigger: AGTGCACAAGAACAGACTCAAGAGTTCACTACCCTG...CCCAAGACACAAGGCCTTGTGTGTATCCTCTCCCAGGAATAGTAAAAAGCAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR GCA 72 bp | CCTATCCCCAGTGTGGCCACATGGAATATCTCTCTCTaGTTTTTACTATTCCTGGGAGAGGATACACACAAG | + |
|
Preference number: 3 (lower is better) Translates to: PIPSVATWNISL*FLLFLGEDTHK Trigger: CTTGTGTGTATCCTCTCCCAGGAATAGTAAAAAGCAGAGAGAGATATTCCATGTGGCCACACTGGGGATAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR-3UTR CAA 90 bp | GTAGAAGATGTTAGGGAAAGAAAAGGGTGTCACTCCAGCCTGAGCCCAGGAATTGAGATTTTCCCTTCTTaGATGTTTGGTGGCCATCAT | + |
|
Preference number: 3 (lower is better) Translates to: VEDVRERKGCHSSLSPGIEIFPS*MFGGHH Trigger: ATGATGGCCACCAAACATCAAAGAAGGGAAAATCTC...AATTCCTGGGCTCAGGCTGGAGTGACACCCTTTTCTTTCCCTAACATCTTCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| 3UTR TCA 72 bp | GAGCTGTTGGTCATGAAGAAATCCTTCCAGATTCGTTaGGCAAACACTGCATCTCTAATGTGGGAGATGCCT | + |
|
Preference number: 3 (lower is better) Translates to: ELLVMKKSFQIR*ANTASLMWEMP Trigger: AGGCATCTCCCACATTAGAGATGCAGTGTTTGCTCAACGAATCTGGAAGGATTTCTTCATGACCAACAGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 ENSMUST00000195358.2 |
||
| 3UTR TCA 72 bp | ATTAGAACAAAACCTTACAGGATGGACAGGTACCTGTaGTGGTGGGTTGGGTGCAGGAGTAGAGAAATAGTC | + |
|
Preference number: 3 (lower is better) Translates to: IRTKPYRMDRYL*WWVGCRSREIV Trigger: GACTATTTCTCTACTCCTGCACCCAACCCACCATCACAGGTACCTGTCCATCCTGTAAGGTTTTGTTCTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR CCA 72 bp | CTCAATGCAGGAGATTTTCCCTTCTTTGATGTTTGGTaGCCATCATGGGGTGCAGTGTGTGGAATTATTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LNAGDFPFFDVW*PSWGAVCGIIL Trigger: GAGAATAATTCCACACACTGCACCCCATGATGGCCACCAAACATCAAAGAAGGGAAAATCTCCTGCATTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| 3UTR GCA 72 bp | ATCAGACAGGGTAGTGAACTCTTGAGTCTGTTCTTGTaGACTATACTTCTCCAAAGGATGAACCCTAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: IRQGSELLSLFL*TILLQRMNPKV Trigger: CACCTTAGGGTTCATCCTTTGGAGAAGTATAGTGCACAAGAACAGACTCAAGAGTTCACTACCCTGTCTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR TCA 72 bp | AAGCTCTCAGAAATCTCCTCACACAGCTTCATTCACTaGCTGCAGTCAGACAAATCTACCAAGGGTCAATTA | + |
|
Preference number: 3 (lower is better) Translates to: KLSEISSHSFIH*LQSDKSTKGQL Trigger: TAATTGACCCTTGGTAGATTTGTCTGACTGCAGTCAGTGAATGAAGCTGTGTGAGGAGATTTCTGAGAGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR TCA 72 bp | TGGCATAGTACACACTTCATGAGCTTTAGAGCACTGTaGTGGTCTTTCCATCTTGGCTTTTGTTTAAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: WHSTHFMSFRAL*WSFHLGFCLSL Trigger: CAGGCTTAAACAAAAGCCAAGATGGAAAGACCATCACAGTGCTCTAAAGCTCATGAAGTGTGTACTATGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR TCA 72 bp | TTGCTTTCCAAAGACCATGGCATAGTACACACTTCATaGGCTTTAGAGCACTGTGATGGTCTTTCCATCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LLSKDHGIVHTS*ALEHCDGLSIL Trigger: CAAGATGGAAAGACCATCACAGTGCTCTAAAGCTCATGAAGTGTGTACTATGCCATGGTCTTTGGAAAGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR GCA 72 bp | TATCTAGACCAGGTTAGCCTTGAACTCACAGAGTTCTaGTTGCCTCAGCAAAGTCGTATAAGCAAAGTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: YLDQVSLELTEF*LPQQSRISKVH Trigger: ATGAACTTTGCTTATACGACTTTGCTGAGGCAAGCAGAACTCTGTGAGTTCAAGGCTAACCTGGTCTAGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR CCA 72 bp | AAACTCAATGCAGGAGATTTTCCCTTCTTTGATGTTTaGTGGCCATCATGGGGTGCAGTGTGTGGAATTATT | + |
|
Preference number: 3 (lower is better) Translates to: KLNAGDFPFFDV*WPSWGAVCGII Trigger: AATAATTCCACACACTGCACCCCATGATGGCCACCAAACATCAAAGAAGGGAAAATCTCCTGCATTGAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| 3UTR GCA 72 bp | ACCACAATGCTCTTATACATGTACCTAAGACCACAATaGTCTTGGATGCCACAAACACAGATCTTTGACACT | + |
|
Preference number: 3 (lower is better) Translates to: TTMLLYMYLRPQ*SWMPQTQIFDT Trigger: AGTGTCAAAGATCTGTGTTTGTGGCATCCAAGAGCATTGTGGTCTTAGGTACATGTATAAGAGCATTGTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR CCA 72 bp | TCTTGGCTTTTGTTTAAGCCTGCGAGATTTGTCTGCTaGCTCTGGTGTCAAAACTTTGTCTCTACTTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SWLLFKPARFVC*LWCQNFVSTLK Trigger: TTTTAAAGTAGAGACAAAGTTTTGACACCAGAGCCAGCAGACAAATCTCGCAGGCTTAAACAAAAGCCAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR TCA 72 bp | GAGGAGCAGGAGTCTTTAAAGTCACAGAGCATAGCTTaGCCATGTATGATTTCCTGTTTTCCTAAATTACTT | + |
|
Preference number: 3 (lower is better) Translates to: EEQESLKSQSIA*PCMISCFPKLL Trigger: AAGTAATTTAGGAAAACAGGAAATCATACATGGTCAAGCTATGCTCTGTGACTTTAAAGACTCCTGCTCCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR CCA 72 bp | ATGCTCTTATACATGTACCTAAGACCACAATGCTCTTaGATGCCACAAACACAGATCTTTGACACTAAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: MLLYMYLRPQCS*MPQTQIFDTKD Trigger: ATCTTTAGTGTCAAAGATCTGTGTTTGTGGCATCCAAGAGCATTGTGGTCTTAGGTACATGTATAAGAGCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR-3UTR CAA 90 bp | AAGGAGTCTGAGTTTCCAATTACTCATGGATCATATTTTCACTGTGTTTGGCATTCTACAGTAACACTTTaGCTTGTTCCTCCACAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: KESEFPITHGSYFHCVWHSTVTL*LVPPQK Trigger: TTTCTGTGGAGGAACAAGCAAAAGTGTTACTGTAGA...ATGCCAAACACAGTGAAAATATGATCCATGAGTAATTGGAAACTCAGACTCCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| 3UTR TCA 72 bp | GTCTTTGTGAGCTTACAGGCATTTGGGTTACATCCTTaGCTCAATCCTGTATTAAGAATAAAGGAGATACAT | + |
|
Preference number: 3 (lower is better) Translates to: VFVSLQAFGLHP*LNPVLRIKEIH Trigger: ATGTATCTCCTTTATTCTTAATACAGGATTGAGTCAAGGATGTAACCCAAATGCCTGTAAGCTCACAAAGAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR GCA 72 bp | AACAGGCTGTATTTAAATTCATCATGTTATAAACCTTaGAGAGTGAAGCGAGAAAATGAGATAGCCTACAGG | + |
|
Preference number: 3 (lower is better) Translates to: NRLYLNSSCYKP*RVKRENEIAYR Trigger: CCTGTAGGCTATCTCATTTTCTCGCTTCACTCTGCAAGGTTTATAACATGATGAATTTAAATACAGCCTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR TCA 72 bp | CCACAAAAGCATCTATTATTAATCCTACCTTACAAATaGAGAATCTGGGCACTAAAAATAAGCCTGAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PQKHLLLILPYK*RIWALKISLSL Trigger: CAGACTCAGGCTTATTTTTAGTGCCCAGATTCTTCATTTGTAAGGTAGGATTAATAATAGATGCTTTTGTGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR TCA 72 bp | AAAAATAACAGAGGAGGGACTTTCCTACAAGATCTTTaGATAAGGGAAGATTTGCATAAGCCATATTTAACC | + |
|
Preference number: 3 (lower is better) Translates to: KNNRGGTFLQDL*IREDLHKPYLT Trigger: GGTTAAATATGGCTTATGCAAATCTTCCCTTATTCAAAGATCTTGTAGGAAAGTCCCTCCTCTGTTATTTTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| CDS-3UTR CCA 90 bp | ATGAGCGAGGGGAAATTAGGAGGAGCTGTTGGTCATGAAGAAATCCTTCCAGATCAGACTGTGGGCCTGTaGCTGGTGCGTTGGTCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: MSEGKLGGAVGHEEILPDQTVGL*LVRWSD Trigger: GTCGGACCAACGCACCAGCCACAGGCCCACAGTCTG...ATCTGGAAGGATTTCTTCATGACCAACAGCTCCTCCTAATTTCCCCTCGCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195358.2 |
||
| CDS-3UTR TCA 90 bp | AGCGAGGGGAAATTAGGAGGAGCTGTTGGTCATGAAGAAATCCTTCCAGATTCGGCTGCCTTTCGTTTGTaGCAGGCGTCATCGTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SEGKLGGAVGHEEILPDSAAFRL*QASSFH Trigger: ATGGAACGATGACGCCTGTCACAAACGAAAGGCAGC...CGAATCTGGAAGGATTTCTTCATGACCAACAGCTCCTCCTAATTTCCCCTCGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| CDS-3UTR GCA 90 bp | CTCTGCTTTTTACTATTCCTGGGAGAGGATACACACAAGGCCTTGTGTCTTGGGTTCCCAAGGGGTGGATaGAGTCCATGGTACCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: LCFLLFLGEDTHKALCLGFPRGG*SPWYPT Trigger: AGTTGGGTACCATGGACTGCATCCACCCCTTGGGAA...CCCAAGACACAAGGCCTTGTGTGTATCCTCTCCCAGGAATAGTAAAAAGCAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| CDS-3UTR CCA 90 bp | TCACCACCCTCATTTAAAGAGCACTTCCGACCTGGAGCCCTTTCCCATTGCTCCAAAGCACACTTGGACTaGAAGCTGAAGTTTCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPPSFKEHFRPGALSHCSKAHLD*KLKFPK Trigger: CTTGGGAAACTTCAGCTTCCAGTCCAAGTGTGCTTT...GGAGCAATGGGAAAGGGCTCCAGGTCGGAAGTGCTCTTTAAATGAGGGTGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| CDS-3UTR TCA 90 bp | GAAGAAATCCTTCCAGATTCGTTGAGCAAACACTGCATCTCTAATGTGGGAGATGCCTTGCCAGCCAAATaGGAAATGCCAGCCCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EEILPDSLSKHCISNVGDALPAK*EMPAPR Trigger: TCTCGGGGCTGGCATTTCTCATTTGGCTGGCAAGGC...ATCTCCCACATTAGAGATGCAGTGTTTGCTCAACGAATCTGGAAGGATTTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 ENSMUST00000195358.2 |
||
| CDS-3UTR CCA 90 bp | TTCCATCTTGGCTTTTGTTTAAGCCTGCGAGATTTGTCTGCTGGCTCTGGTGTCCCACACAGTCCTCCTTaGACTTCTTGTTGTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FHLGFCLSLRDLSAGSGVPHSPP*TSCCWA Trigger: AGCCCAACAACAAGAAGTCCAAGGAGGACTGTGTGG...GACACCAGAGCCAGCAGACAAATCTCGCAGGCTTAAACAAAAGCCAAGATGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR CAA 72 bp | TCAAGAGATAGAGGTCTTGTGCTGCTCAAGGGTGTTTaGACGTGTCACTCTCCAGTGAAGCTCTGGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRDRGLVLLKGV*TCHSPVKLWSS Trigger: AGAAGACCAGAGCTTCACTGGAGAGTGACACGTCAAAACACCCTTGAGCAGCACAAGACCTCTATCTCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR CAA 72 bp | AGTGATAATAAGCCTGGCATACAGGGTGTCAGTAACTaGCTCAAACCACATGGCACAGGGAAGCCACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SDNKPGIQGVSN*LKPHGTGKPQC Trigger: ACACTGTGGCTTCCCTGTGCCATGTGGTTTGAGCAAGTTACTGACACCCTGTATGCCAGGCTTATTATCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| CDS-3UTR TCA 90 bp | TTCACGGGAGGACTTGACGTTATTTTCCAATGTTTTGTCTTTAGCACTTCATGGGCCTTGCCAGCCAAATaGGAAATGCCAGCCCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FTGGLDVIFQCFVFSTSWALPAK*EMPAPR Trigger: TCTCGGGGCTGGCATTTCTCATTTGGCTGGCAAGGC...CCATGAAGTGCTAAAGACAAAACATTGGAAAATAACGTCAAGTCCTCCCGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 ENSMUST00000195358.2 |
||
| CDS-3UTR CCA 90 bp | TCACGGGAGGACTTGACGTTATTTTCCAATGTTTTGTCTTTAGCACTTCATGGCTGGACTTCTTGTTGTTaGGCTCCCCAGCACCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SREDLTLFSNVLSLALHGWTSCC*APQHPS Trigger: ACTGGGGTGCTGGGGAGCCCAACAACAAGAAGTCCA...GCCATGAAGTGCTAAAGACAAAACATTGGAAAATAACGTCAAGTCCTCCCGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| CDS-3UTR CCA 90 bp | TTCACGGGAGGACTTGACGTTATTTTCCAATGTTTTGTCTTTAGCACTTCATGGGGTGGATGCAGTCCATaGTACCCAACTCAGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FTGGLDVIFQCFVFSTSWGGCSP*YPTQGP Trigger: AGGCCCCTGAGTTGGGTACCATGGACTGCATCCACC...CCATGAAGTGCTAAAGACAAAACATTGGAAAATAACGTCAAGTCCTCCCGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| 3UTR CAA 72 bp | GGAGCTGTTGGTCATGAAGAAATCCTTCCAGATTCGTaGAGCAAACACTGCATCTCTAATGTGGGAGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: GAVGHEEILPDS*SKHCISNVGDA Trigger: GGCATCTCCCACATTAGAGATGCAGTGTTTGCTCAACGAATCTGGAAGGATTTCTTCATGACCAACAGCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 ENSMUST00000195358.2 |
||
| CDS-3UTR TCA 90 bp | TTCACGGGAGGACTTGACGTTATTTTCCAATGTTTTGTCTTTAGCACTTCATGGGCTGCCTTTCGTTTGTaGCAGGCGTCATCGTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FTGGLDVIFQCFVFSTSWAAFRL*QASSFH Trigger: ATGGAACGATGACGCCTGTCACAAACGAAAGGCAGC...CCATGAAGTGCTAAAGACAAAACATTGGAAAATAACGTCAAGTCCTCCCGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| CDS-3UTR TCA 90 bp | AAAGCAGCTGTCTTTATATTCTACAGTAACACTTTTGCTTGTTCCTCCACAGAAGCCTTGCCAGCCAAATaGGAAATGCCAGCCCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KAAVFIFYSNTFACSSTEALPAK*EMPAPR Trigger: TCTCGGGGCTGGCATTTCTCATTTGGCTGGCAAGGC...TTCTGTGGAGGAACAAGCAAAAGTGTTACTGTAGAATATAAAGACAGCTGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 ENSMUST00000195358.2 |
||
| CDS-3UTR GCA 90 bp | GAAGAAATCCTTCCAGATTCGTTGAGCAAACACTGCATCTCTAATGTGGGAGATTTCTTGCCTCAAAACTaGAGCAGACTGTGGGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EEILPDSLSKHCISNVGDFLPQN*SRLWAC Trigger: ACAGGCCCACAGTCTGCTGCAGTTTTGAGGCAAGAA...ATCTCCCACATTAGAGATGCAGTGTTTGCTCAACGAATCTGGAAGGATTTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195358.2 |
||
| CDS-3UTR CCA 90 bp | TCACCACCCTCATTTAAAGAGCACTTCCGACCTGGAGCCCTTTCCCATTGCTCCCTCTCTTGTTTTGTATaGCGACTAAATCTGTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SPPSFKEHFRPGALSHCSLSCFV*RLNLCN Trigger: ATTACACAGATTTAGTCGCCATACAAAACAAGAGAG...GGAGCAATGGGAAAGGGCTCCAGGTCGGAAGTGCTCTTTAAATGAGGGTGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| CDS-3UTR CCA 90 bp | AAAGCAGCTGTCTTTATATTCTACAGTAACACTTTTGCTTGTTCCTCCACAGAAGGTGGATGCAGTCCATaGTACCCAACTCAGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KAAVFIFYSNTFACSSTEGGCSP*YPTQGP Trigger: AGGCCCCTGAGTTGGGTACCATGGACTGCATCCACC...TTCTGTGGAGGAACAAGCAAAAGTGTTACTGTAGAATATAAAGACAGCTGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| CDS-3UTR CCA 90 bp | GAGTTGGGGACAGCTGTCCTGAATCTTAAATTTAGGTATCTGAGTAGAAGATGTAAGTTTCCCAAGGGGTaGATGCAGTCCATGGTACCC | + |
|
Preference number: 4 (lower is better) Translates to: ELGTAVLNLKFRYLSRRCKFPKG*MQSMVP Trigger: GGGTACCATGGACTGCATCCACCCCTTGGGAAACTT...ACATCTTCTACTCAGATACCTAAATTTAAGATTCAGGACAGCTGTCCCCAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| 3UTR CAA 72 bp | CTAGACCAGGTTAGCCTTGAACTCACAGAGTTCTGCTaGCCTCAGCAAAGTCGTATAAGCAAAGTTCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: LDQVSLELTEFC*PQQSRISKVHE Trigger: CTCATGAACTTTGCTTATACGACTTTGCTGAGGCAAGCAGAACTCTGTGAGTTCAAGGCTAACCTGGTCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR CAA 72 bp | TTACTCAACAGCTGGTGTTATTCCTTAGTTGCTGAGTaGTGGCTGGTTCATATACACCATCAGCCCCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLNSWCYSLVAE*WLVHIHHQPQE Trigger: CTCTTGGGGCTGATGGTGTATATGAACCAGCCACAACTCAGCAACTAAGGAATAACACCAGCTGTTGAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR CAA 72 bp | AGCATCAGACAGGGTAGTGAACTCTTGAGTCTGTTCTaGTGCACTATACTTCTCCAAAGGATGAACCCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SIRQGSELLSLF*CTILLQRMNPK Trigger: CTTAGGGTTCATCCTTTGGAGAAGTATAGTGCACAAGAACAGACTCAAGAGTTCACTACCCTGTCTGATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR CAA 72 bp | ACCACATGGCACAGGGAAGCCACAGTGTTGCTTAATTaGCTGGTAAACTTCAAAAGCATGAGAAGGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: TTWHREATVLLN*LVNFKSMRRRS Trigger: AGATCTCCTTCTCATGCTTTTGAAGTTTACCAGCAAATTAAGCAACACTGTGGCTTCCCTGTGCCATGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR CAA 72 bp | CTTGCTCAAACCACATGGCACAGGGAAGCCACAGTGTaGCTTAATTTGCTGGTAAACTTCAAAAGCATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LAQTTWHREATV*LNLLVNFKSMR Trigger: TCTCATGCTTTTGAAGTTTACCAGCAAATTAAGCAACACTGTGGCTTCCCTGTGCCATGTGGTTTGAGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| CDS-3UTR TCA 90 bp | ATGCCTGCGTGTAAAATCTTCACGGGAGGACTTGACGTTATTTTCCAATGTTTTTTCCCTCAGAACAGTTaGAAGCACACTTGGACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: MPACKIFTGGLDVIFQCFFPQNS*KHTWTG Trigger: TCCAGTCCAAGTGTGCTTTCAACTGTTCTGAGGGAA...AAAACATTGGAAAATAACGTCAAGTCCTCCCGTGAAGATTTTACACGCAGGCAT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| CDS-3UTR TCA 90 bp | TTCACGGGAGGACTTGACGTTATTTTCCAATGTTTTGTCTTTAGCACTTCATGGTTCCCTCAGAACAGTTaGAAGCACACTTGGACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FTGGLDVIFQCFVFSTSWFPQNS*KHTWTG Trigger: TCCAGTCCAAGTGTGCTTTCAACTGTTCTGAGGGAA...CCATGAAGTGCTAAAGACAAAACATTGGAAAATAACGTCAAGTCCTCCCGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| CDS-3UTR GCA 90 bp | AAGGAGTCTGAGTTTCCAATTACTCATGGATCATATTTTCACTGTGTTTGGCATTTCCCAAGGGGTGGATaGAGTCCATGGTACCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: KESEFPITHGSYFHCVWHFPRGG*SPWYPT Trigger: AGTTGGGTACCATGGACTGCATCCACCCCTTGGGAA...ATGCCAAACACAGTGAAAATATGATCCATGAGTAATTGGAAACTCAGACTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| CDS-3UTR GCA 90 bp | CTTGACGTTATTTTCCAATGTTTTGTCTTTAGCACTTCATGGCTTTCCTTTCACCAGCCAAATGAGAAATaGCAGCCCCGAGAATGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LDVIFQCFVFSTSWLSFHQPNEK*QPRECG Trigger: ACCGCATTCTCGGGGCTGGCATTTCTCATTTGGCTG...GTGAAAGGAAAGCCATGAAGTGCTAAAGACAAAACATTGGAAAATAACGTCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 ENSMUST00000195358.2 |
||
| CDS-3UTR GCA 90 bp | GGACTTGACGTTATTTTCCAATGTTTTGTCTTTAGCACTTCATGGCTTTCCTTTCAGCCAAATGAGAAATaGCAGCCCCGAGAATGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLDVIFQCFVFSTSWLSFQPNEK*QPRECG Trigger: ACCGCATTCTCGGGGCTGGCATTTCTCATTTGGCTG...AAAGGAAAGCCATGAAGTGCTAAAGACAAAACATTGGAAAATAACGTCAAGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 ENSMUST00000195358.2 |
||
| 3UTR CAA 72 bp | TACAGAGGAACAGAGATTAGAAGACGCTCGTCTTGTTaGCTTGGTGTTTTCTCACAAGCTCTCAGAAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: YRGTEIRRRSSC*LGVFSQALRNL Trigger: GAGATTTCTGAGAGCTTGTGAGAAAACACCAAGCAAACAAGACGAGCGTCTTCTAATCTCTGTTCCTCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR CAA 72 bp | TCTTTCCATCTTGGCTTTTGTTTAAGCCTGCGAGATTaGTCTGCTGGCTCTGGTGTCAAAACTTTGTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SFHLGFCLSLRD*SAGSGVKTLSL Trigger: TAGAGACAAAGTTTTGACACCAGAGCCAGCAGACAAATCTCGCAGGCTTAAACAAAAGCCAAGATGGAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| 3UTR CAA 72 bp | TTTTTACTATTCCTGGGAGAGGATACACACAAGGCCTaGTGTCTTGGGATATTGCATAGGATAGTGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FLLFLGEDTHKA*CLGILHRIVEK Trigger: CTTCTCCACTATCCTATGCAATATCCCAAGACACAAGGCCTTGTGTGTATCCTCTCCCAGGAATAGTAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| CDS-3UTR TCA 90 bp | CATGAAGAAATCCTTCCAGATTCGTTGAGCAAACACTGCATCTCTAATGTGGGATCACAGATGCACGTGTaGTTGTTGATAGTTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: HEEILPDSLSKHCISNVGSQMHV*LLIVST Trigger: TGTGGAAACTATCAACAATCACACGTGCATCTGTGA...TCCCACATTAGAGATGCAGTGTTTGCTCAACGAATCTGGAAGGATTTCTTCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027871.13 |
||
| CDS-3UTR CCA 90 bp | AACACTGCATCTCTAATGTGGGAGATGCCTGCGTGTAAAATCTTCACGGGAGGACTCTCTTGTTTTGTATaGCGACTAAATCTGTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: NTASLMWEMPACKIFTGGLSCFV*RLNLCN Trigger: ATTACACAGATTTAGTCGCCATACAAAACAAGAGAG...TCCTCCCGTGAAGATTTTACACGCAGGCATCTCCCACATTAGAGATGCAGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| CDS-3UTR CCA 90 bp | TTCCAATTACTCATGGATCATATTTTCACTGTGTTTGGCATTAGCTTCTGTGCTCCACACAGTCCTCCTTaGACTTCTTGTTGTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FQLLMDHIFTVFGISFCAPHSPP*TSCCWA Trigger: AGCCCAACAACAAGAAGTCCAAGGAGGACTGTGTGG...AGCACAGAAGCTAATGCCAAACACAGTGAAAATATGATCCATGAGTAATTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| 3UTR CAA 72 bp | AGAGCACTGTTCTTTGGAGGTGGAAATGAAAGATTTTaGTCGATGTTACATAGGGTACGTACTATGCGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RALFFGGGNERF*SMLHRVRTMRK Trigger: CTTGCGCATAGTACGTACCCTATGTAACATCGACAAAAATCTTTCATTTCCACCTCCAAAGAACAGTGCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| CDS-3UTR GCA 90 bp | CATGAAGAAATCCTTCCAGATTCGTTGAGCAAACACTGCATCTCTAATGTGGGATTTCTTGAGATTTCTTaGCTCAAAACTGCAGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HEEILPDSLSKHCISNVGFLEIS*LKTAAD Trigger: GTCTGCTGCAGTTTTGAGGCAAGAAATCTCAAGAAA...TCCCACATTAGAGATGCAGTGTTTGCTCAACGAATCTGGAAGGATTTCTTCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195358.2 |
||
| CDS-3UTR TCA 90 bp | TCACGGGAGGACTTGACGTTATTTTCCAATGTTTTGTCTTTAGCACTTCATGGCTGTAGTCACCTTCTTTaGTCTTTGAGAAACTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SREDLTLFSNVLSLALHGCSHLL*SLRNFC Trigger: ACAGAAGTTTCTCAAAGATCAAAGAAGGTGACTACA...GCCATGAAGTGCTAAAGACAAAACATTGGAAAATAACGTCAAGTCCTCCCGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 ENSMUST00000195358.2 |
||
| CDS-3UTR CCA 90 bp | CATGAAGAAATCCTTCCAGATTCGTTGAGCAAACACTGCATCTCTAATGTGGGACATTTTCCCAGTTCATaGGCTTTTCAGAATAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: HEEILPDSLSKHCISNVGHFPSS*AFQNNG Trigger: ACCATTATTCTGAAAAGCCCATGAACTGGGAAAATG...TCCCACATTAGAGATGCAGTGTTTGCTCAACGAATCTGGAAGGATTTCTTCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| CDS-3UTR CCA 90 bp | CTTGACGTTATTTTCCAATGTTTTGTCTTTAGCACTTCATGGCTTTCCTTTCACAAAGCACACTTGGACTaGAAGCTGAAGTTTCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LDVIFQCFVFSTSWLSFHKAHLD*KLKFPK Trigger: CTTGGGAAACTTCAGCTTCCAGTCCAAGTGTGCTTT...GTGAAAGGAAAGCCATGAAGTGCTAAAGACAAAACATTGGAAAATAACGTCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| 3UTR CAA 72 bp | TCTTCACGGGAGGACTTGACGTTATTTTCCAATGTTTaGTCTTTAGCACTTCATGGCTTTCCTTTCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSREDLTLFSNV*SLALHGFPFTK Trigger: CTTTGTGAAAGGAAAGCCATGAAGTGCTAAAGACAAAACATTGGAAAATAACGTCAAGTCCTCCCGTGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 ENSMUST00000195358.2 |
||
| CDS-3UTR TCA 90 bp | TTCACGGGAGGACTTGACGTTATTTTCCAATGTTTTGTCTTTAGCACTTCATGGTGTAGTCACCTTCTTTaGTCTTTGAGAAACTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FTGGLDVIFQCFVFSTSWCSHLL*SLRNFC Trigger: ACAGAAGTTTCTCAAAGATCAAAGAAGGTGACTACA...CCATGAAGTGCTAAAGACAAAACATTGGAAAATAACGTCAAGTCCTCCCGTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 ENSMUST00000195358.2 |
||
| CDS-3UTR TCA 90 bp | TCTTCACGGGAGGACTTGACGTTATTTTCCAATGTTTTGTCTTTAGCACTTCATTCATCCATCCTTTCTTaGGATTTCTTGCCTCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSREDLTLFSNVLSLALHSSILS*DFLPQN Trigger: GTTTTGAGGCAAGAAATCTCAAGAAAGGATGGATGA...ATGAAGTGCTAAAGACAAAACATTGGAAAATAACGTCAAGTCCTCCCGTGAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000195358.2 |
||
| CDS-3UTR CCA 90 bp | GCAAGGAGTCTGAGTTTCCAATTACTCATGGATCATATTTTCACTGTGTTTGGCCATTTTCCCAGTTCATaGGCTTTTCAGAATAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: ARSLSFQLLMDHIFTVFGHFPSS*AFQNNG Trigger: ACCATTATTCTGAAAAGCCCATGAACTGGGAAAATG...GCCAAACACAGTGAAAATATGATCCATGAGTAATTGGAAACTCAGACTCCTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| 3UTR CAA 72 bp | TGTCTTTGTGAGCTTACAGGCATTTGGGTTACATCCTaGACTCAATCCTGTATTAAGAATAAAGGAGATACA | + |
|
Preference number: 4 (lower is better) Translates to: CLCELTGIWVTS*TQSCIKNKGDT Trigger: TGTATCTCCTTTATTCTTAATACAGGATTGAGTCAAGGATGTAACCCAAATGCCTGTAAGCTCACAAAGACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| CDS-3UTR TCA 90 bp | TTCCAATTACTCATGGATCATATTTTCACTGTGTTTGGCATTAGCTTCTGTGCTTGTAGTCACCTTCTTTaGTCTTTGAGAAACTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FQLLMDHIFTVFGISFCACSHLL*SLRNFC Trigger: ACAGAAGTTTCTCAAAGATCAAAGAAGGTGACTACA...AGCACAGAAGCTAATGCCAAACACAGTGAAAATATGATCCATGAGTAATTGGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| CDS GCA 90 bp | GCCATTGCAAGACCCTGGCTGGCAAGAGGCTGTGTAGCAGAGAGCTaGCTTTCGTTTGTGACAGGCGTCATCGTTCCATTTCCCAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: AIARPWLARGCVAES*LSFVTGVIVPFPRV Trigger: GACTCTGGGAAATGGAACGATGACGCCTGTCACAAACGAAAGGCAGCTCTCTGCTACACAGCCTCTTGCCAGCCAGGGTCTTGCAATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000097491.10 |
||
| CDS CCA 90 bp | CAGTTGAAAGCACACTTGGACTGGAAGCTGAAGTTTCCCAAGGGGTaGATGCAGTCCATGGTACCCAACTCAGGGGCCTCCAAAGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QLKAHLDWKLKFPKG*MQSMVPNSGASKGS Trigger: TGAGCCTTTGGAGGCCCCTGAGTTGGGTACCATGGACTGCATCCACCCCTTGGGAAACTTCAGCTTCCAGTCCAAGTGTGCTTTCAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027871.13 ENSMUST00000097491.10 ENSMUST00000192047.6 |
||
| CDS TCA 90 bp | CTCCAAAGGCTCACACTGGACCACTTGGCAGATTGGCTCTGGAGATaGCCAGTTTCCAGATGCTCCACACTGTGTTTCTGCAGTCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LQRLTLDHLADWLWR*PVSRCSTLCFCSPK Trigger: CTTGGGACTGCAGAAACACAGTGTGGAGCATCTGGAAACTGGTCATCTCCAGAGCCAATCTGCCAAGTGGTCCAGTGTGAGCCTTTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027871.13 ENSMUST00000097491.10 ENSMUST00000192047.6 |
||
| CDS GCA 90 bp | AGGCTCACACTGGACCACATACTGACACTGGGGCCCGTAATACCCTaGATCACAGATGCACGTGTGATTGTTGATAGTTTCCACACATTC | + |
|
Preference number: 5 (lower is better) Translates to: RLTLDHILTLGPVIP*ITDARVIVDSFHTF Trigger: GAATGTGTGGAAACTATCAACAATCACACGTGCATCTGTGATGCAGGGTATTACGGGCCCCAGTGTCAGTATGTGGTCCAGTGTGAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000097491.10 |
||
| CDS-3UTR CAA 90 bp | GAGTTGGGGACAGCTGTCCTGAATCTTAAATTTAGGTATCTGAGTAGAAGATGTTCCTTGGACTTCTTGTaGTTGGGCTCCCCAGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: ELGTAVLNLKFRYLSRRCSLDFL*LGSPAP Trigger: GGGTGCTGGGGAGCCCAACAACAAGAAGTCCAAGGA...ACATCTTCTACTCAGATACCTAAATTTAAGATTCAGGACAGCTGTCCCCAACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| CDS-3UTR CAA 90 bp | GATAGCCTACAGGTTGGGCAAGTTAAGGAGCAAGTTATAAAAGACATGGTAAGACATTCTCCACGGCCATaGCAAGACCCTGGCTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: DSLQVGQVKEQVIKDMVRHSPRP*QDPGWQ Trigger: TTGCCAGCCAGGGTCTTGCAATGGCCGTGGAGAATG...TCTTACCATGTCTTTTATAACTTGCTCCTTAACTTGCCCAACCTGTAGGCTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027871.13 |
||
| CDS-3UTR CAA 90 bp | CATGAAGAAATCCTTCCAGATTCGTTGAGCAAACACTGCATCTCTAATGTGGGATCCACACAGTCCTCCTaGGACTTCTTGTTGTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: HEEILPDSLSKHCISNVGSTQSS*DFLLLG Trigger: GCCCAACAACAAGAAGTCCAAGGAGGACTGTGTGGA...TCCCACATTAGAGATGCAGTGTTTGCTCAACGAATCTGGAAGGATTTCTTCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| CDS-3UTR CAA 90 bp | AAAGCAGCTGTCTTTATATTCTACAGTAACACTTTTGCTTGTTCCTCCACAGAATTGGACTTCTTGTTGTaGGGCTCCCCAGCACCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KAAVFIFYSNTFACSSTELDFLL*GSPAPQ Trigger: CTGGGGTGCTGGGGAGCCCAACAACAAGAAGTCCAA...TTCTGTGGAGGAACAAGCAAAAGTGTTACTGTAGAATATAAAGACAGCTGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| CDS-3UTR CAA 90 bp | CTTGACGTTATTTTCCAATGTTTTGTCTTTAGCACTTCATGGCTTTCCTTTCACTTGGACTTCTTGTTGTaGGGCTCCCCAGCACCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LDVIFQCFVFSTSWLSFHLDFLL*GSPAPQ Trigger: CTGGGGTGCTGGGGAGCCCAACAACAAGAAGTCCAA...GTGAAAGGAAAGCCATGAAGTGCTAAAGACAAAACATTGGAAAATAACGTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| CDS-3UTR CAA 90 bp | TTTCCCAACTTGAATAGAGCACTGTTCTTTGGAGGTGGAAATGAAAGATTTTTGTCCTTGGACTTCTTGTaGTTGGGCTCCCCAGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: FPNLNRALFFGGGNERFLSLDFL*LGSPAP Trigger: GGGTGCTGGGGAGCCCAACAACAAGAAGTCCAAGGA...CAAAAATCTTTCATTTCCACCTCCAAAGAACAGTGCTCTATTCAAGTTGGGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| CDS-3UTR CAA 90 bp | TCTTCACGGGAGGACTTGACGTTATTTTCCAATGTTTTGTCTTTAGCACTTCATTCCTCCTTGGACTTCTaGTTGTTGGGCTCCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSREDLTLFSNVLSLALHSSLDF*LLGSPA Trigger: TGCTGGGGAGCCCAACAACAAGAAGTCCAAGGAGGA...ATGAAGTGCTAAAGACAAAACATTGGAAAATAACGTCAAGTCCTCCCGTGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| CDS-3UTR CAA 90 bp | ATGAGCGAGGGGAAATTAGGAGGAGCTGTTGGTCATGAAGAAATCCTTCCAGATTTGAGAAACTTCTGTTaGTCTCTTGGCAGATTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: MSEGKLGGAVGHEEILPDLRNFC*SLGRLA Trigger: AGCCAATCTGCCAAGAGACAAACAGAAGTTTCTCAA...ATCTGGAAGGATTTCTTCATGACCAACAGCTCCTCCTAATTTCCCCTCGCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 ENSMUST00000195358.2 |
||
| CDS-3UTR CAA 90 bp | AGTCTGAGTTTCCAATTACTCATGGATCATATTTTCACTGTGTTTGGCATTAGCTCCACACAGTCCTCCTaGGACTTCTTGTTGTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLSFQLLMDHIFTVFGISSTQSS*DFLLLG Trigger: GCCCAACAACAAGAAGTCCAAGGAGGACTGTGTGGA...GCTAATGCCAAACACAGTGAAAATATGATCCATGAGTAATTGGAAACTCAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| CDS-3UTR CAA 90 bp | TCTTCACGGGAGGACTTGACGTTATTTTCCAATGTTTTGTCTTTAGCACTTCATACTTCTGTTTGTCTCTaGGCAGATTGGCTCTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSREDLTLFSNVLSLALHTSVCL*ADWLWR Trigger: TCTCCAGAGCCAATCTGCCAAGAGACAAACAGAAGT...ATGAAGTGCTAAAGACAAAACATTGGAAAATAACGTCAAGTCCTCCCGTGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 ENSMUST00000195358.2 |
||
| CDS-3UTR CAA 90 bp | TTTCCCAACTTGAATAGAGCACTGTTCTTTGGAGGTGGAAATGAAAGATTTTTGACTTCTGTTTGTCTCTaGGCAGATTGGCTCTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: FPNLNRALFFGGGNERFLTSVCL*ADWLWR Trigger: TCTCCAGAGCCAATCTGCCAAGAGACAAACAGAAGT...CAAAAATCTTTCATTTCCACCTCCAAAGAACAGTGCTCTATTCAAGTTGGGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| CDS-3UTR CAA 90 bp | GGACTTGACGTTATTTTCCAATGTTTTGTCTTTAGCACTTCATGGCTTTCCTTTACTTCTGTTTGTCTCTaGGCAGATTGGCTCTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GLDVIFQCFVFSTSWLSFTSVCL*ADWLWR Trigger: TCTCCAGAGCCAATCTGCCAAGAGACAAACAGAAGT...AAAGGAAAGCCATGAAGTGCTAAAGACAAAACATTGGAAAATAACGTCAAGTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 ENSMUST00000195358.2 |
||
| CDS-3UTR CAA 90 bp | TTCACGGGAGGACTTGACGTTATTTTCCAATGTTTTGTCTTTAGCACTTCATGGTTGAGAAACTTCTGTTaGTCTCTTGGCAGATTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FTGGLDVIFQCFVFSTSWLRNFC*SLGRLA Trigger: AGCCAATCTGCCAAGAGACAAACAGAAGTTTCTCAA...CCATGAAGTGCTAAAGACAAAACATTGGAAAATAACGTCAAGTCCTCCCGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 ENSMUST00000195358.2 |
||
| CDS-3UTR CAA 90 bp | AAGGAGTCTGAGTTTCCAATTACTCATGGATCATATTTTCACTGTGTTTGGCATTTGAGAAACTTCTGTTaGTCTCTTGGCAGATTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KESEFPITHGSYFHCVWHLRNFC*SLGRLA Trigger: AGCCAATCTGCCAAGAGACAAACAGAAGTTTCTCAA...ATGCCAAACACAGTGAAAATATGATCCATGAGTAATTGGAAACTCAGACTCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000192047.6 |
||
| CDS CCA 72 bp | GCACACTTGGACTGGAAGCTGAAGTTTCCCAAGGGGTaGATGCAGTCCATGGTACCCAACTCAGGGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: AHLDWKLKFPKG*MQSMVPNSGAS Trigger: GGAGGCCCCTGAGTTGGGTACCATGGACTGCATCCACCCCTTGGGAAACTTCAGCTTCCAGTCCAAGTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027871.13 ENSMUST00000097491.10 ENSMUST00000192047.6 |
||
| CDS CCA 72 bp | AGTTTCCACACATTCTCCACGGCCATTGCAAGACCCTaGCTGGCAAGAGGCTGTGTAGCAGAGAGCTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SFHTFSTAIARP*LARGCVAESCL Trigger: AAGGCAGCTCTCTGCTACACAGCCTCTTGCCAGCCAGGGTCTTGCAATGGCCGTGGAGAATGTGTGGAAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000097491.10 |
||
| CDS GCA 72 bp | AGACCCTGGCTGGCAAGAGGCTGTGTAGCAGAGAGCTaGCTTTCGTTTGTGACAGGCGTCATCGTTCCATTT | + |
|
Preference number: 6 (lower is better) Translates to: RPWLARGCVAES*LSFVTGVIVPF Trigger: AAATGGAACGATGACGCCTGTCACAAACGAAAGGCAGCTCTCTGCTACACAGCCTCTTGCCAGCCAGGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000097491.10 |
||
| CDS TCA 72 bp | CTCACACTGGACCACTTGGCAGATTGGCTCTGGAGATaGCCAGTTTCCAGATGCTCCACACTGTGTTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LTLDHLADWLWR*PVSRCSTLCFC Trigger: GCAGAAACACAGTGTGGAGCATCTGGAAACTGGTCATCTCCAGAGCCAATCTGCCAAGTGGTCCAGTGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027871.13 ENSMUST00000097491.10 ENSMUST00000192047.6 |
||
| CDS CAA 90 bp | CACTGTGTTTCTGCAGTCCCAAGTAGCTCTCTTCCCTCAGAACAGTaGAAAGCACACTTGGACTGGAAGCTGAAGTTTCCCAAGGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: HCVSAVPSSSLPSEQ*KAHLDWKLKFPKGW Trigger: CCACCCCTTGGGAAACTTCAGCTTCCAGTCCAAGTGTGCTTTCAACTGTTCTGAGGGAAGAGAGCTACTTGGGACTGCAGAAACACAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027871.13 ENSMUST00000097491.10 ENSMUST00000192047.6 |
||
| CDS GCA 72 bp | CAAAGGCTCACACTGGACCACTGTGTAGCAGAGAGCTaGCTTTCGTTTGTGACAGGCGTCATCGTTCCATTT | + |
|
Preference number: 6 (lower is better) Translates to: QRLTLDHCVAES*LSFVTGVIVPF Trigger: AAATGGAACGATGACGCCTGTCACAAACGAAAGGCAGCTCTCTGCTACACAGTGGTCCAGTGTGAGCCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192047.6 |
||
| CDS CCA 72 bp | TCTCTTCCCTCAGAACAGTTGAAAGCACACTTGGACTaGAAGCTGAAGTTTCCCAAGGGGTGGATGCAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLPSEQLKAHLD*KLKFPKGWMQS Trigger: GGACTGCATCCACCCCTTGGGAAACTTCAGCTTCCAGTCCAAGTGTGCTTTCAACTGTTCTGAGGGAAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027871.13 ENSMUST00000097491.10 ENSMUST00000192047.6 |
||
| CDS GCA 72 bp | CTGGACCACATACTGACACTGGGGCCCGTAATACCCTaGATCACAGATGCACGTGTGATTGTTGATAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LDHILTLGPVIP*ITDARVIVDSF Trigger: GAAACTATCAACAATCACACGTGCATCTGTGATGCAGGGTATTACGGGCCCCAGTGTCAGTATGTGGTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027871.13 ENSMUST00000097491.10 |
||
| CDS CAA 72 bp | AGTAGCTCTCTTCCCTCAGAACAGTTGAAAGCACACTaGGACTGGAAGCTGAAGTTTCCCAAGGGGTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: SSSLPSEQLKAH*DWKLKFPKGWM Trigger: CATCCACCCCTTGGGAAACTTCAGCTTCCAGTCCAAGTGTGCTTTCAACTGTTCTGAGGGAAGAGAGCTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027871.13 ENSMUST00000097491.10 ENSMUST00000192047.6 |
||
| CDS TCA 72 bp | ACTTCTGTTTGTCTCTTGGCAGATTGGCTCTGGAGATaGCCAGTTTCCAGATGCTCCACACTGTGTTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TSVCLLADWLWR*PVSRCSTLCFC Trigger: GCAGAAACACAGTGTGGAGCATCTGGAAACTGGTCATCTCCAGAGCCAATCTGCCAAGAGACAAACAGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027871.13 ENSMUST00000097491.10 ENSMUST00000192047.6 ENSMUST00000195358.2 |
||