Pregenerated sensors for SELENOP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000064373Ensembl transcript IDs: ENSMUST00000082424.12, ENSMUST00000159158.9, ENSMUST00000159216.10, ENSMUST00000160311.3, ENSMUST00000160787.10, ENSMUST00000160930.3
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCAAGATAGTCCCTCAGAGCTCAGCAGAACAGTACAGCATTAAATaGAGAGAACAAGATGCACAGATACATGCAGTGCAACTCAAGCTA | + |
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Preference number: 1 (lower is better) Translates to: LKIVPQSSAEQYSIK*REQDAQIHAVQLKL Trigger: TAGCTTGAGTTGCACTGCATGTATCTGTGCATCTTGTTCTCTTCATTTAATGCTGTACTGTTCTGCTGAGCTCTGAGGGACTATCTTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| 3UTR-3UTR GCA 90 bp | TCCATTACATCTCTCAAGATAGTCCCTCAGAGCTCAGCAGAACAGTACAGCATTAGATGCACAGATACATaGAGTGCAACTCAAGCTAGG | + |
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Preference number: 2 (lower is better) Translates to: SITSLKIVPQSSAEQYSIRCTDT*SATQAR Trigger: CCTAGCTTGAGTTGCACTGCATGTATCTGTGCATCT...AATGCTGTACTGTTCTGCTGAGCTCTGAGGGACTATCTTGAGAGATGTAATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| 3UTR-3UTR GCA 90 bp | TCCATTACATCTCTCAAGATAGTCCCTCAGAGCTCAGCAGAACAGTACAGCATTATATTAACCAAAGGCTaGAGTCACTTTTCAGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: SITSLKIVPQSSAEQYSIILTKG*SHFSGA Trigger: GGCACCTGAAAAGTGACTGCAGCCTTTGGTTAATAT...AATGCTGTACTGTTCTGCTGAGCTCTGAGGGACTATCTTGAGAGATGTAATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| 3UTR-3UTR GCA 90 bp | CATTCTTGCTTAGTCGTATTAGCCATAAAAGAGGTCAGGTTCATAGGACTTAGTAGATGCACAGATACATaGAGTGCAACTCAAGCTAGG | + |
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Preference number: 2 (lower is better) Translates to: HSCLVVLAIKEVRFIGLSRCTDT*SATQAR Trigger: CCTAGCTTGAGTTGCACTGCATGTATCTGTGCATCT...ACTAAGTCCTATGAACCTGACCTCTTTTATGGCTAATACGACTAAGCAAGAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| 3UTR-3UTR GCA 90 bp | CATTCTTGCTTAGTCGTATTAGCCATAAAAGAGGTCAGGTTCATAGGACTTAGTATATTAACCAAAGGCTaGAGTCACTTTTCAGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: HSCLVVLAIKEVRFIGLSILTKG*SHFSGA Trigger: GGCACCTGAAAAGTGACTGCAGCCTTTGGTTAATAT...ACTAAGTCCTATGAACCTGACCTCTTTTATGGCTAATACGACTAAGCAAGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| 3UTR-3UTR CCA 90 bp | TCCATTACATCTCTCAAGATAGTCCCTCAGAGCTCAGCAGAACAGTACAGCATTTGTACAAATCTGATTTaGATGAAATGTTCTGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: SITSLKIVPQSSAEQYSICTNLI*MKCSVA Trigger: TGCCACAGAACATTTCATCCAAATCAGATTTGTACA...AATGCTGTACTGTTCTGCTGAGCTCTGAGGGACTATCTTGAGAGATGTAATGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| 3UTR-3UTR CCA 90 bp | TGCACAGATACATGCAGTGCAACTCAAGCTAGGACTCTGAGAGAGAAAATGATGTGTACAAATCTGATTTaGATGAAATGTTCTGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: CTDTCSATQARTLREKMMCTNLI*MKCSVA Trigger: TGCCACAGAACATTTCATCCAAATCAGATTTGTACA...CATCATTTTCTCTCTCAGAGTCCTAGCTTGAGTTGCACTGCATGTATCTGTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| 3UTR CAA 90 bp | AAAGACATATTAACCAAAGGCTGCAGTCACTTTTCAGGTGCCCTATaGTACAAATCTGATTTGGATGAAATGTTCTGTGGCATAAAATTT | + |
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Preference number: 2 (lower is better) Translates to: KDILTKGCSHFSGAL*YKSDLDEMFCGIKF Trigger: AAATTTTATGCCACAGAACATTTCATCCAAATCAGATTTGTACAATAGGGCACCTGAAAAGTGACTGCAGCCTTTGGTTAATATGTCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| 3UTR-3UTR CAA 90 bp | TCCATTACATCTCTCAAGATAGTCCCTCAGAGCTCAGCAGAACAGTACAGCATTTTGTACAAATCTGATTaGGATGAAATGTTCTGTGGC | + |
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Preference number: 3 (lower is better) Translates to: SITSLKIVPQSSAEQYSILYKSD*DEMFCG Trigger: GCCACAGAACATTTCATCCAAATCAGATTTGTACAA...AATGCTGTACTGTTCTGCTGAGCTCTGAGGGACTATCTTGAGAGATGTAATGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| 3UTR-3UTR CAA 90 bp | TGCACAGATACATGCAGTGCAACTCAAGCTAGGACTCTGAGAGAGAAAATGATGTTGTACAAATCTGATTaGGATGAAATGTTCTGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: CTDTCSATQARTLREKMMLYKSD*DEMFCG Trigger: GCCACAGAACATTTCATCCAAATCAGATTTGTACAA...CATCATTTTCTCTCTCAGAGTCCTAGCTTGAGTTGCACTGCATGTATCTGTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| 3UTR-3UTR CAA 90 bp | TGCACAGATACATGCAGTGCAACTCAAGCTAGGACTCTGAGAGAGAAAATGATGCTGGAAAATATGTCTTaGTTGTTCTTTCTCCGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: CTDTCSATQARTLREKMMLENMS*LFFLRS Trigger: AGAACGGAGAAAGAACAACAAAGACATATTTTCCAG...CATCATTTTCTCTCTCAGAGTCCTAGCTTGAGTTGCACTGCATGTATCTGTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| 3UTR-3UTR CAA 90 bp | CCACTTAATTCTGTACTCCATTCTTGCTTAGTCGTATTAGCCATAAAAGAGGTCCTGGAAAATATGTCTTaGTTGTTCTTTCTCCGTTCT | + |
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Preference number: 3 (lower is better) Translates to: PLNSVLHSCLVVLAIKEVLENMS*LFFLRS Trigger: AGAACGGAGAAAGAACAACAAAGACATATTTTCCAG...GACCTCTTTTATGGCTAATACGACTAAGCAAGAATGGAGTACAGAATTAAGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS-3UTR CCA 90 bp | TCCATTACATCTCTCAAGATAGTCCCTCAGAGCTCAGCAGAACAGTACAGCATTGACAGCAGCAGCTGCTaGGGGCTGCCTCGGACTCCT | + |
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Preference number: 4 (lower is better) Translates to: SITSLKIVPQSSAEQYSIDSSSC*GLPRTP Trigger: AGGAGTCCGAGGCAGCCCCCAGCAGCTGCTGCTGTC...AATGCTGTACTGTTCTGCTGAGCTCTGAGGGACTATCTTGAGAGATGTAATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS-3UTR GCA 90 bp | TCCATTACATCTCTCAAGATAGTCCCTCAGAGCTCAGCAGAACAGTACAGCATTAGTGACAGCAGCAGCTaGTGGGGGCTGCCTCGGACT | + |
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Preference number: 4 (lower is better) Translates to: SITSLKIVPQSSAEQYSISDSSS*WGLPRT Trigger: AGTCCGAGGCAGCCCCCAGCAGCTGCTGCTGTCACT...AATGCTGTACTGTTCTGCTGAGCTCTGAGGGACTATCTTGAGAGATGTAATGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS-3UTR TCA 90 bp | TCCATTACATCTCTCAAGATAGTCCCTCAGAGCTCAGCAGAACAGTACAGCATTGTGGTGGTGCAAGCCTaGAGGAGGCAGAGTCGTCTC | + |
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Preference number: 4 (lower is better) Translates to: SITSLKIVPQSSAEQYSIVVVQA*RRQSRL Trigger: GAGACGACTCTGCCTCCTTCAGGCTTGCACCACCAC...AATGCTGTACTGTTCTGCTGAGCTCTGAGGGACTATCTTGAGAGATGTAATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS-3UTR CCA 90 bp | CATTCTTGCTTAGTCGTATTAGCCATAAAAGAGGTCAGGTTCATAGGACTTAGTGACAGCAGCAGCTGCTaGGGGCTGCCTCGGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HSCLVVLAIKEVRFIGLSDSSSC*GLPRTP Trigger: AGGAGTCCGAGGCAGCCCCCAGCAGCTGCTGCTGTC...ACTAAGTCCTATGAACCTGACCTCTTTTATGGCTAATACGACTAAGCAAGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS-3UTR GCA 90 bp | CATTCTTGCTTAGTCGTATTAGCCATAAAAGAGGTCAGGTTCATAGGACTTAGTAGTGACAGCAGCAGCTaGTGGGGGCTGCCTCGGACT | + |
|
Preference number: 4 (lower is better) Translates to: HSCLVVLAIKEVRFIGLSSDSSS*WGLPRT Trigger: AGTCCGAGGCAGCCCCCAGCAGCTGCTGCTGTCACT...ACTAAGTCCTATGAACCTGACCTCTTTTATGGCTAATACGACTAAGCAAGAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS-3UTR TCA 90 bp | CATTCTTGCTTAGTCGTATTAGCCATAAAAGAGGTCAGGTTCATAGGACTTAGTGTGGTGGTGCAAGCCTaGAGGAGGCAGAGTCGTCTC | + |
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Preference number: 4 (lower is better) Translates to: HSCLVVLAIKEVRFIGLSVVVQA*RRQSRL Trigger: GAGACGACTCTGCCTCCTTCAGGCTTGCACCACCAC...ACTAAGTCCTATGAACCTGACCTCTTTTATGGCTAATACGACTAAGCAAGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS-3UTR TCA 90 bp | TCCATTACATCTCTCAAGATAGTCCCTCAGAGCTCAGCAGAACAGTACAGCATTATGGGGTTCATGGGCTaGTTTTGTCAGGCAGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: SITSLKIVPQSSAEQYSIMGFMG*FCQAAG Trigger: TCCAGCTGCCTGACAAAATCAGCCCATGAACCCCAT...AATGCTGTACTGTTCTGCTGAGCTCTGAGGGACTATCTTGAGAGATGTAATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS-3UTR GCA 90 bp | TGCACAGATACATGCAGTGCAACTCAAGCTAGGACTCTGAGAGAGAAAATGATGTCTCTGAAGGCTTACTaGTGCCAAGATGCTCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: CTDTCSATQARTLREKMMSLKAY*CQDAPA Trigger: GGCAGGAGCATCTTGGCAGCAGTAAGCCTTCAGAGA...CATCATTTTCTCTCTCAGAGTCCTAGCTTGAGTTGCACTGCATGTATCTGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS-3UTR GCA 90 bp | CATTCTTGCTTAGTCGTATTAGCCATAAAAGAGGTCAGGTTCATAGGACTTAGTCTGTGCTGGCCCCTATaGCTGTGGTGGTGGTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: HSCLVVLAIKEVRFIGLSLCWPL*LWWWCK Trigger: CTTGCACCACCACCACAGGCATAGGGGCCAGCACAG...ACTAAGTCCTATGAACCTGACCTCTTTTATGGCTAATACGACTAAGCAAGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS-3UTR GCA 90 bp | TCCATTACATCTCTCAAGATAGTCCCTCAGAGCTCAGCAGAACAGTACAGCATTGTGCAAGCCTTCACTTaGTGTGGTGTCTCAGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: SITSLKIVPQSSAEQYSIVQAFT*CGVSAL Trigger: GAGAGCTGAGACACCACAGCAAGTGAAGGCTTGCAC...AATGCTGTACTGTTCTGCTGAGCTCTGAGGGACTATCTTGAGAGATGTAATGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS-3UTR CCA 90 bp | TCCATTACATCTCTCAAGATAGTCCCTCAGAGCTCAGCAGAACAGTACAGCATTCGTCAGAGCTTCCTCTaGGCAAGTGAAAGGTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: SITSLKIVPQSSAEQYSIRQSFL*ASERCK Trigger: CTTGCACCTTTCACTTGCCCAGAGGAAGCTCTGACG...AATGCTGTACTGTTCTGCTGAGCTCTGAGGGACTATCTTGAGAGATGTAATGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS-3UTR TCA 90 bp | CATTCTTGCTTAGTCGTATTAGCCATAAAAGAGGTCAGGTTCATAGGACTTAGTTGTTTGTGGTGGCTATaGGCCTCTGAGGGCTCCGCA | + |
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Preference number: 4 (lower is better) Translates to: HSCLVVLAIKEVRFIGLSCLWWL*ASEGSA Trigger: TGCGGAGCCCTCAGAGGCTCATAGCCACCACAAACA...ACTAAGTCCTATGAACCTGACCTCTTTTATGGCTAATACGACTAAGCAAGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS-3UTR TCA 90 bp | TTAGCCATAAAAGAGGTCAGGTTCATAGGACTTAGTTTCTCTATGAAACCATCATCTCAGCTCTCTAAGTaGCCCTGCCTGTGCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: LAIKEVRFIGLSFSMKPSSQLSK*PCLCWP Trigger: GGGCCAGCACAGGCAGGGTCACTTAGAGAGCTGAGA...TGATGGTTTCATAGAGAAACTAAGTCCTATGAACCTGACCTCTTTTATGGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS-3UTR CCA 90 bp | CCACTTAATTCTGTACTCCATTCTTGCTTAGTCGTATTAGCCATAAAAGAGGTCCCCCTATGCCTGTGGTaGTGGTGCAAGCCTGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: PLNSVLHSCLVVLAIKEVPLCLW*WCKPEG Trigger: TCCTTCAGGCTTGCACCACCACCACAGGCATAGGGG...GACCTCTTTTATGGCTAATACGACTAAGCAAGAATGGAGTACAGAATTAAGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS-3UTR TCA 90 bp | TTAGCCATAAAAGAGGTCAGGTTCATAGGACTTAGTTTCTCTATGAAACCATCATGTTTGTGGTGGCTATaGGCCTCTGAGGGCTCCGCA | + |
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Preference number: 4 (lower is better) Translates to: LAIKEVRFIGLSFSMKPSCLWWL*ASEGSA Trigger: TGCGGAGCCCTCAGAGGCTCATAGCCACCACAAACA...TGATGGTTTCATAGAGAAACTAAGTCCTATGAACCTGACCTCTTTTATGGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS-3UTR TCA 90 bp | CATTCTTGCTTAGTCGTATTAGCCATAAAAGAGGTCAGGTTCATAGGACTTAGTTACACAGGAGCTGGTTaGTGCACCCCCTTCGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: HSCLVVLAIKEVRFIGLSYTGAG*CTPFVR Trigger: TCTGACGAAGGGGGTGCATCAACCAGCTCCTGTGTA...ACTAAGTCCTATGAACCTGACCTCTTTTATGGCTAATACGACTAAGCAAGAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS-3UTR TCA 90 bp | CCACTTAATTCTGTACTCCATTCTTGCTTAGTCGTATTAGCCATAAAAGAGGTCTCAGGCAGCTGGAGGTaGCCTACACTGACAGGATTC | + |
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Preference number: 4 (lower is better) Translates to: PLNSVLHSCLVVLAIKEVSGSWR*PTLTGF Trigger: GAATCCTGTCAGTGTAGGTCACCTCCAGCTGCCTGA...GACCTCTTTTATGGCTAATACGACTAAGCAAGAATGGAGTACAGAATTAAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS-3UTR GCA 90 bp | TGCACAGATACATGCAGTGCAACTCAAGCTAGGACTCTGAGAGAGAAAATGATGTTACTGCTGCCAAGATaGTCCTGCCCATGTTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: CTDTCSATQARTLREKMMLLLPR*SCPCLL Trigger: CAACAAACATGGGCAGGAGCATCTTGGCAGCAGTAA...CATCATTTTCTCTCTCAGAGTCCTAGCTTGAGTTGCACTGCATGTATCTGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS-3UTR CCA 90 bp | TGCACAGATACATGCAGTGCAACTCAAGCTAGGACTCTGAGAGAGAAAATGATGAGCCTTCACTTGCTGTaGTGTCTCAGCTCTCTAAGT | + |
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Preference number: 4 (lower is better) Translates to: CTDTCSATQARTLREKMMSLHLL*CLSSLS Trigger: ACTTAGAGAGCTGAGACACCACAGCAAGTGAAGGCT...CATCATTTTCTCTCTCAGAGTCCTAGCTTGAGTTGCACTGCATGTATCTGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS-3UTR TCA 90 bp | TGCACAGATACATGCAGTGCAACTCAAGCTAGGACTCTGAGAGAGAAAATGATGCACTGCGATGTGTTCTaGCACCTGCTTTTTAAGATG | + |
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Preference number: 4 (lower is better) Translates to: CTDTCSATQARTLREKMMHCDVF*HLLFKM Trigger: CATCTTAAAAAGCAGGTGTCAGAACACATCGCAGTG...CATCATTTTCTCTCTCAGAGTCCTAGCTTGAGTTGCACTGCATGTATCTGTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS-3UTR TCA 90 bp | TCCATTACATCTCTCAAGATAGTCCCTCAGAGCTCAGCAGAACAGTACAGCATTCACTGCGATGTGTTCTaGCACCTGCTTTTTAAGATG | + |
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Preference number: 4 (lower is better) Translates to: SITSLKIVPQSSAEQYSIHCDVF*HLLFKM Trigger: CATCTTAAAAAGCAGGTGTCAGAACACATCGCAGTG...AATGCTGTACTGTTCTGCTGAGCTCTGAGGGACTATCTTGAGAGATGTAATGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS-3UTR TCA 90 bp | TGCACAGATACATGCAGTGCAACTCAAGCTAGGACTCTGAGAGAGAAAATGATGCAACATATGGGAATGTaGGGAAGGAGTAAGGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: CTDTCSATQARTLREKMMQHMGM*GRSKAN Trigger: GTTTGCCTTACTCCTTCCTCACATTCCCATATGTTG...CATCATTTTCTCTCTCAGAGTCCTAGCTTGAGTTGCACTGCATGTATCTGTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS-3UTR TCA 90 bp | TTAGCCATAAAAGAGGTCAGGTTCATAGGACTTAGTTTCTCTATGAAACCATCATACACAGGAGCTGGTTaGTGCACCCCCTTCGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: LAIKEVRFIGLSFSMKPSYTGAG*CTPFVR Trigger: TCTGACGAAGGGGGTGCATCAACCAGCTCCTGTGTA...TGATGGTTTCATAGAGAAACTAAGTCCTATGAACCTGACCTCTTTTATGGCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS-3UTR TCA 90 bp | TTAGCCATAAAAGAGGTCAGGTTCATAGGACTTAGTTTCTCTATGAAACCATCATCAGGCAGCTGGAGGTaGCCTACACTGACAGGATTC | + |
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Preference number: 4 (lower is better) Translates to: LAIKEVRFIGLSFSMKPSSGSWR*PTLTGF Trigger: GAATCCTGTCAGTGTAGGTCACCTCCAGCTGCCTGA...TGATGGTTTCATAGAGAAACTAAGTCCTATGAACCTGACCTCTTTTATGGCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS-3UTR GCA 90 bp | TCCATTACATCTCTCAAGATAGTCCCTCAGAGCTCAGCAGAACAGTACAGCATTGTCTTCCAATCTGGATaGCTGCAGAAGACACAAGTA | + |
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Preference number: 4 (lower is better) Translates to: SITSLKIVPQSSAEQYSIVFQSG*LQKTQV Trigger: TACTTGTGTCTTCTGCAGGCATCCAGATTGGAAGAC...AATGCTGTACTGTTCTGCTGAGCTCTGAGGGACTATCTTGAGAGATGTAATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS-3UTR GCA 90 bp | CCACTTAATTCTGTACTCCATTCTTGCTTAGTCGTATTAGCCATAAAAGAGGTCTCTCTGAAGGCTTACTaGTGCCAAGATGCTCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: PLNSVLHSCLVVLAIKEVSLKAY*CQDAPA Trigger: GGCAGGAGCATCTTGGCAGCAGTAAGCCTTCAGAGA...GACCTCTTTTATGGCTAATACGACTAAGCAAGAATGGAGTACAGAATTAAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS-3UTR GCA 90 bp | CATTCTTGCTTAGTCGTATTAGCCATAAAAGAGGTCAGGTTCATAGGACTTAGTGTGCAAGCCTTCACTTaGTGTGGTGTCTCAGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: HSCLVVLAIKEVRFIGLSVQAFT*CGVSAL Trigger: GAGAGCTGAGACACCACAGCAAGTGAAGGCTTGCAC...ACTAAGTCCTATGAACCTGACCTCTTTTATGGCTAATACGACTAAGCAAGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS-3UTR CCA 90 bp | TCCATTACATCTCTCAAGATAGTCCCTCAGAGCTCAGCAGAACAGTACAGCATTGACACAAGTATCAGCTaGCTTGAAGAAGAGCAACCA | + |
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Preference number: 4 (lower is better) Translates to: SITSLKIVPQSSAEQYSIDTSIS*LEEEQP Trigger: TGGTTGCTCTTCTTCAAGCCAGCTGATACTTGTGTC...AATGCTGTACTGTTCTGCTGAGCTCTGAGGGACTATCTTGAGAGATGTAATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS-3UTR CCA 90 bp | CATTCTTGCTTAGTCGTATTAGCCATAAAAGAGGTCAGGTTCATAGGACTTAGTCGTCAGAGCTTCCTCTaGGCAAGTGAAAGGTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: HSCLVVLAIKEVRFIGLSRQSFL*ASERCK Trigger: CTTGCACCTTTCACTTGCCCAGAGGAAGCTCTGACG...ACTAAGTCCTATGAACCTGACCTCTTTTATGGCTAATACGACTAAGCAAGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS-3UTR TCA 90 bp | CATTCTTGCTTAGTCGTATTAGCCATAAAAGAGGTCAGGTTCATAGGACTTAGTTGGTTGCTGATTCTCTaGAGGCTTACTGCTGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: HSCLVVLAIKEVRFIGLSWLLIL*RLTAAK Trigger: CTTGGCAGCAGTAAGCCTTCAGAGAATCAGCAACCA...ACTAAGTCCTATGAACCTGACCTCTTTTATGGCTAATACGACTAAGCAAGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS-3UTR TCA 90 bp | TTAGCCATAAAAGAGGTCAGGTTCATAGGACTTAGTTTCTCTATGAAACCATCAATGGGGTTCATGGGCTaGTTTTGTCAGGCAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LAIKEVRFIGLSFSMKPSMGFMG*FCQAAG Trigger: TCCAGCTGCCTGACAAAATCAGCCCATGAACCCCAT...TGATGGTTTCATAGAGAAACTAAGTCCTATGAACCTGACCTCTTTTATGGCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS-3UTR CCA 90 bp | TGCACAGATACATGCAGTGCAACTCAAGCTAGGACTCTGAGAGAGAAAATGATGGGCTTCTTCAACATATaGGAATGTGAGGAAGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: CTDTCSATQARTLREKMMGFFNI*ECEEGV Trigger: TACTCCTTCCTCACATTCCCATATGTTGAAGAAGCC...CATCATTTTCTCTCTCAGAGTCCTAGCTTGAGTTGCACTGCATGTATCTGTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS-3UTR CCA 90 bp | CATTCTTGCTTAGTCGTATTAGCCATAAAAGAGGTCAGGTTCATAGGACTTAGTCTTCCATGGGGTTCATaGGCTGATTTTGTCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HSCLVVLAIKEVRFIGLSLPWGS*ADFVRQ Trigger: CTGCCTGACAAAATCAGCCCATGAACCCCATGGAAG...ACTAAGTCCTATGAACCTGACCTCTTTTATGGCTAATACGACTAAGCAAGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS-3UTR TCA 90 bp | TGCACAGATACATGCAGTGCAACTCAAGCTAGGACTCTGAGAGAGAAAATGATGCACATCTGTCATAGATaGGGAAGTCATCTTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CTDTCSATQARTLREKMMHICHR*GSHLCF Trigger: GAAACAAAGATGACTTCCTCATCTATGACAGATGTG...CATCATTTTCTCTCTCAGAGTCCTAGCTTGAGTTGCACTGCATGTATCTGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS-3UTR TCA 90 bp | TTAGCCATAAAAGAGGTCAGGTTCATAGGACTTAGTTTCTCTATGAAACCATCATGGTTGCTGATTCTCTaGAGGCTTACTGCTGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LAIKEVRFIGLSFSMKPSWLLIL*RLTAAK Trigger: CTTGGCAGCAGTAAGCCTTCAGAGAATCAGCAACCA...TGATGGTTTCATAGAGAAACTAAGTCCTATGAACCTGACCTCTTTTATGGCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS-3UTR GCA 90 bp | CATTCTTGCTTAGTCGTATTAGCCATAAAAGAGGTCAGGTTCATAGGACTTAGTTTACTGCTGCCAAGATaGTCCTGCCCATGTTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HSCLVVLAIKEVRFIGLSLLLPR*SCPCLL Trigger: CAACAAACATGGGCAGGAGCATCTTGGCAGCAGTAA...ACTAAGTCCTATGAACCTGACCTCTTTTATGGCTAATACGACTAAGCAAGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS-3UTR CCA 90 bp | CCACTTAATTCTGTACTCCATTCTTGCTTAGTCGTATTAGCCATAAAAGAGGTCAGCCTTCACTTGCTGTaGTGTCTCAGCTCTCTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PLNSVLHSCLVVLAIKEVSLHLL*CLSSLS Trigger: ACTTAGAGAGCTGAGACACCACAGCAAGTGAAGGCT...GACCTCTTTTATGGCTAATACGACTAAGCAAGAATGGAGTACAGAATTAAGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS-3UTR CCA 90 bp | TCCATTACATCTCTCAAGATAGTCCCTCAGAGCTCAGCAGAACAGTACAGCATTGTCATTTTCACTTCCTaGTCTGATTATCTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SITSLKIVPQSSAEQYSIVIFTS*SDYLSF Trigger: GAAGCTGAGATAATCAGACCAGGAAGTGAAAATGAC...AATGCTGTACTGTTCTGCTGAGCTCTGAGGGACTATCTTGAGAGATGTAATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS-3UTR GCA 90 bp | CCACTTAATTCTGTACTCCATTCTTGCTTAGTCGTATTAGCCATAAAAGAGGTCGTCTTCCAATCTGGATaGCTGCAGAAGACACAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PLNSVLHSCLVVLAIKEVVFQSG*LQKTQV Trigger: TACTTGTGTCTTCTGCAGGCATCCAGATTGGAAGAC...GACCTCTTTTATGGCTAATACGACTAAGCAAGAATGGAGTACAGAATTAAGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS-3UTR CCA 90 bp | CCACTTAATTCTGTACTCCATTCTTGCTTAGTCGTATTAGCCATAAAAGAGGTCGACACAAGTATCAGCTaGCTTGAAGAAGAGCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: PLNSVLHSCLVVLAIKEVDTSIS*LEEEQP Trigger: TGGTTGCTCTTCTTCAAGCCAGCTGATACTTGTGTC...GACCTCTTTTATGGCTAATACGACTAAGCAAGAATGGAGTACAGAATTAAGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS-3UTR CCA 90 bp | CATTCTTGCTTAGTCGTATTAGCCATAAAAGAGGTCAGGTTCATAGGACTTAGTGGCTTCTTCAACATATaGGAATGTGAGGAAGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: HSCLVVLAIKEVRFIGLSGFFNI*ECEEGV Trigger: TACTCCTTCCTCACATTCCCATATGTTGAAGAAGCC...ACTAAGTCCTATGAACCTGACCTCTTTTATGGCTAATACGACTAAGCAAGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS-3UTR TCA 90 bp | CCACTTAATTCTGTACTCCATTCTTGCTTAGTCGTATTAGCCATAAAAGAGGTCCACATCTGTCATAGATaGGGAAGTCATCTTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLNSVLHSCLVVLAIKEVHICHR*GSHLCF Trigger: GAAACAAAGATGACTTCCTCATCTATGACAGATGTG...GACCTCTTTTATGGCTAATACGACTAAGCAAGAATGGAGTACAGAATTAAGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS-3UTR GCA 90 bp | TTAGCCATAAAAGAGGTCAGGTTCATAGGACTTAGTTTCTCTATGAAACCATCAGAGTCCAGACATCTATaGCATCTTCTTCTTGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LAIKEVRFIGLSFSMKPSESRHL*HLLLVC Trigger: ACAGACAAGAAGAAGATGGCATAGATGTCTGGACTC...TGATGGTTTCATAGAGAAACTAAGTCCTATGAACCTGACCTCTTTTATGGCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS-3UTR CCA 90 bp | CCACTTAATTCTGTACTCCATTCTTGCTTAGTCGTATTAGCCATAAAAGAGGTCGTCATTTTCACTTCCTaGTCTGATTATCTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLNSVLHSCLVVLAIKEVVIFTS*SDYLSF Trigger: GAAGCTGAGATAATCAGACCAGGAAGTGAAAATGAC...GACCTCTTTTATGGCTAATACGACTAAGCAAGAATGGAGTACAGAATTAAGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS-3UTR GCA 90 bp | CATTCTTGCTTAGTCGTATTAGCCATAAAAGAGGTCAGGTTCATAGGACTTAGTATGTGTTCTGACACCTaGTTTTTAAGATGTGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HSCLVVLAIKEVRFIGLSMCSDT*FLRCEC Trigger: ACACTCACATCTTAAAAAGCAGGTGTCAGAACACAT...ACTAAGTCCTATGAACCTGACCTCTTTTATGGCTAATACGACTAAGCAAGAATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS-3UTR GCA 90 bp | CCACTTAATTCTGTACTCCATTCTTGCTTAGTCGTATTAGCCATAAAAGAGGTCATGTGTTCTGACACCTaGTTTTTAAGATGTGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLNSVLHSCLVVLAIKEVMCSDT*FLRCEC Trigger: ACACTCACATCTTAAAAAGCAGGTGTCAGAACACAT...GACCTCTTTTATGGCTAATACGACTAAGCAAGAATGGAGTACAGAATTAAGTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS CCA 90 bp | CTGCTGGGGGCTGCCTCGGACTCCTTAGACAACTTACACAGGAGCTaGTTGATGCACCCCCTTCGTCAGAGCTTCCTCTGGGCAAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LLGAASDSLDNLHRS*LMHPLRQSFLWASE Trigger: TTCACTTGCCCAGAGGAAGCTCTGACGAAGGGGGTGCATCAACCAGCTCCTGTGTAAGTTGTCTAAGGAGTCCGAGGCAGCCCCCAGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS GCA 90 bp | CTCAAATATGAGGTGGCGGCAGTGACAGCAGCAGCTGCTGGGGGCTaGCTCGGACTCCTTAGACAACTTACACAGGAGCTGGTTGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: LKYEVAAVTAAAAGG*LGLLRQLTQELVDA Trigger: TGCATCAACCAGCTCCTGTGTAAGTTGTCTAAGGAGTCCGAGGCAGCCCCCAGCAGCTGCTGCTGTCACTGCCGCCACCTCATATTTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS TCA 90 bp | TGCAAGCCTGAAGGAGGCAGAGTCGTCTCTGATGGCCCTGGTTGCTaGTTCTCTGAAGGCTTACTGCTGCCAAGATGCTCCTGCCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: CKPEGGRVVSDGPGC*FSEGLLLPRCSCPC Trigger: ACATGGGCAGGAGCATCTTGGCAGCAGTAAGCCTTCAGAGAATCAGCAACCAGGGCCATCAGAGACGACTCTGCCTCCTTCAGGCTTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS CCA 90 bp | AGAGCTTCCTCTGGGCAAGTGAAAGGTGCAAGCCTTCACTTGCTGTaGTGTCTCAGCTCTCTAAGTGACCCTGCCTGTGCTGGCCCCTAT | + |
|
Preference number: 5 (lower is better) Translates to: RASSGQVKGASLHLL*CLSSLSDPACAGPY Trigger: ATAGGGGCCAGCACAGGCAGGGTCACTTAGAGAGCTGAGACACCACAGCAAGTGAAGGCTTGCACCTTTCACTTGCCCAGAGGAAGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS TCA 90 bp | CCAAGATGCTCCTGCCCATGTTTGTTGTGGTGTTTGTGGTGGCTATaGGCCTCTGAGGGCTCCGCAGTTTTATTGGCAGTAGCTGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PRCSCPCLLWCLWWL*ASEGSAVLLAVAEV Trigger: GACCTCAGCTACTGCCAATAAAACTGCGGAGCCCTCAGAGGCTCATAGCCACCACAAACACCACAACAAACATGGGCAGGAGCATCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS GCA 90 bp | TCGTCTCTGATGGCCCTGGTTGCTGATTCTCTGAAGGCTTACTGCTaGCAAGATGCTCCTGCCCATGTTTGTTGTGGTGTTTGTGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSLMALVADSLKAYC*QDAPAHVCCGVCGG Trigger: GCCACCACAAACACCACAACAAACATGGGCAGGAGCATCTTGGCAGCAGTAAGCCTTCAGAGAATCAGCAACCAGGGCCATCAGAGACGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS CCA 90 bp | ACTTCCTGGTCTGATTATCTCAGCTTCAGTTGGGGTTGGCTTCCATaGGGTTCATGGGCTGATTTTGTCAGGCAGCTGGAGGTGACCTAC | + |
|
Preference number: 5 (lower is better) Translates to: TSWSDYLSFSWGWLP*GSWADFVRQLEVTY Trigger: GTAGGTCACCTCCAGCTGCCTGACAAAATCAGCCCATGAACCCCATGGAAGCCAACCCCAACTGAAGCTGAGATAATCAGACCAGGAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS CCA 90 bp | GCAGGTCTTCCAATCTGGATGCCTGCAGAAGACACAAGTATCAGCTaGCTTGAAGAAGAGCAACCACTGTCACTTTGCCCTCTGAGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: AGLPIWMPAEDTSIS*LEEEQPLSLCPLSL Trigger: TAAACTCAGAGGGCAAAGTGACAGTGGTTGCTCTTCTTCAAGCCAGCTGATACTTGTGTCTTCTGCAGGCATCCAGATTGGAAGACCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000082424.12 ENSMUST00000159158.9 ENSMUST00000159216.10 ENSMUST00000160311.3 ENSMUST00000160787.10 ENSMUST00000160930.3 |
||
| CDS-3UTR CAA 90 bp | TCCATTACATCTCTCAAGATAGTCCCTCAGAGCTCAGCAGAACAGTACAGCATTGGCTCCGCAGTTTTATaGGCAGTAGCTGAGGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: SITSLKIVPQSSAEQYSIGSAVL*AVAEVT Trigger: TGTGACCTCAGCTACTGCCAATAAAACTGCGGAGCC...AATGCTGTACTGTTCTGCTGAGCTCTGAGGGACTATCTTGAGAGATGTAATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS-3UTR CAA 90 bp | TGCACAGATACATGCAGTGCAACTCAAGCTAGGACTCTGAGAGAGAAAATGATGGGCTCCGCAGTTTTATaGGCAGTAGCTGAGGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: CTDTCSATQARTLREKMMGSAVL*AVAEVT Trigger: TGTGACCTCAGCTACTGCCAATAAAACTGCGGAGCC...CATCATTTTCTCTCTCAGAGTCCTAGCTTGAGTTGCACTGCATGTATCTGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS TCA 90 bp | TCTTCCAATCTGGATGCCTGCAGAAGACACAAGTATCAGCTGGCTTaGAGAAGAGCAACCACTGTCACTTTGCCCTCTGAGTTTAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: SSNLDACRRHKYQLA*RRATTVTLPSEFSI Trigger: AATGCTAAACTCAGAGGGCAAAGTGACAGTGGTTGCTCTTCTTCAAGCCAGCTGATACTTGTGTCTTCTGCAGGCATCCAGATTGGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000082424.12 ENSMUST00000159158.9 ENSMUST00000159216.10 ENSMUST00000160311.3 ENSMUST00000160787.10 ENSMUST00000160930.3 |
||
| CDS-3UTR CAA 90 bp | TGCACAGATACATGCAGTGCAACTCAAGCTAGGACTCTGAGAGAGAAAATGATGTCCTGCCCATGTTTGTaGTGGTGTTTGTGGTGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: CTDTCSATQARTLREKMMSCPCL*WCLWWL Trigger: TAGCCACCACAAACACCACAACAAACATGGGCAGGA...CATCATTTTCTCTCTCAGAGTCCTAGCTTGAGTTGCACTGCATGTATCTGTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS-3UTR CAA 90 bp | TCCATTACATCTCTCAAGATAGTCCCTCAGAGCTCAGCAGAACAGTACAGCATTTCCTGCCCATGTTTGTaGTGGTGTTTGTGGTGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: SITSLKIVPQSSAEQYSISCPCL*WCLWWL Trigger: TAGCCACCACAAACACCACAACAAACATGGGCAGGA...AATGCTGTACTGTTCTGCTGAGCTCTGAGGGACTATCTTGAGAGATGTAATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS-3UTR CAA 90 bp | TGCACAGATACATGCAGTGCAACTCAAGCTAGGACTCTGAGAGAGAAAATGATGGCAACCACTGTCACTTaGCCCTCTGAGTTTAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: CTDTCSATQARTLREKMMATTVT*PSEFSI Trigger: AATGCTAAACTCAGAGGGCAAAGTGACAGTGGTTGC...CATCATTTTCTCTCTCAGAGTCCTAGCTTGAGTTGCACTGCATGTATCTGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS-3UTR CAA 90 bp | TGCACAGATACATGCAGTGCAACTCAAGCTAGGACTCTGAGAGAGAAAATGATGCAAGTATCAGCTGGCTaGAAGAAGAGCAACCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: CTDTCSATQARTLREKMMQVSAG*KKSNHC Trigger: ACAGTGGTTGCTCTTCTTCAAGCCAGCTGATACTTG...CATCATTTTCTCTCTCAGAGTCCTAGCTTGAGTTGCACTGCATGTATCTGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS GCA 90 bp | GACACAAGTATCAGCTGGCTTGAAGAAGAGCAACCACTGTCACTTTaGCCTCTGAGTTTAGCATTGGATTTTGATCTCCTATGTACCACT | + |
|
Preference number: 5 (lower is better) Translates to: DTSISWLEEEQPLSL*PLSLALDFDLLCTT Trigger: AGTGGTACATAGGAGATCAAAATCCAATGCTAAACTCAGAGGGCAAAGTGACAGTGGTTGCTCTTCTTCAAGCCAGCTGATACTTGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000082424.12 ENSMUST00000159158.9 ENSMUST00000159216.10 ENSMUST00000160311.3 ENSMUST00000160787.10 ENSMUST00000160930.3 |
||
| CDS-3UTR CAA 90 bp | CCACTTAATTCTGTACTCCATTCTTGCTTAGTCGTATTAGCCATAAAAGAGGTCTGCTCCTGCCCATGTTaGTTGTGGTGTTTGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PLNSVLHSCLVVLAIKEVCSCPC*LWCLWW Trigger: CCACCACAAACACCACAACAAACATGGGCAGGAGCA...GACCTCTTTTATGGCTAATACGACTAAGCAAGAATGGAGTACAGAATTAAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS-3UTR CAA 90 bp | CATTCTTGCTTAGTCGTATTAGCCATAAAAGAGGTCAGGTTCATAGGACTTAGTCACACTGTCAAGCAATaGCAGACCCTGACTTCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: HSCLVVLAIKEVRFIGLSHTVKQ*QTLTSQ Trigger: TTGAGAAGTCAGGGTCTGCAATTGCTTGACAGTGTG...ACTAAGTCCTATGAACCTGACCTCTTTTATGGCTAATACGACTAAGCAAGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS-3UTR CAA 90 bp | TTAGCCATAAAAGAGGTCAGGTTCATAGGACTTAGTTTCTCTATGAAACCATCAGCAACCACTGTCACTTaGCCCTCTGAGTTTAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: LAIKEVRFIGLSFSMKPSATTVT*PSEFSI Trigger: AATGCTAAACTCAGAGGGCAAAGTGACAGTGGTTGC...TGATGGTTTCATAGAGAAACTAAGTCCTATGAACCTGACCTCTTTTATGGCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS-3UTR CAA 90 bp | TTAGCCATAAAAGAGGTCAGGTTCATAGGACTTAGTTTCTCTATGAAACCATCACAAGTATCAGCTGGCTaGAAGAAGAGCAACCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: LAIKEVRFIGLSFSMKPSQVSAG*KKSNHC Trigger: ACAGTGGTTGCTCTTCTTCAAGCCAGCTGATACTTG...TGATGGTTTCATAGAGAAACTAAGTCCTATGAACCTGACCTCTTTTATGGCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS-3UTR CAA 90 bp | CATTCTTGCTTAGTCGTATTAGCCATAAAAGAGGTCAGGTTCATAGGACTTAGTCCTCTGAGTTTAGCATaGGATTTTGATCTCCTATGT | + |
|
Preference number: 5 (lower is better) Translates to: HSCLVVLAIKEVRFIGLSPLSLA*DFDLLC Trigger: ACATAGGAGATCAAAATCCAATGCTAAACTCAGAGG...ACTAAGTCCTATGAACCTGACCTCTTTTATGGCTAATACGACTAAGCAAGAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS-3UTR CAA 90 bp | CCACTTAATTCTGTACTCCATTCTTGCTTAGTCGTATTAGCCATAAAAGAGGTCATGAGGAAGTCATCTTaGTTTCCATTTAAGAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PLNSVLHSCLVVLAIKEVMRKSS*FPFKRV Trigger: GACTCTCTTAAATGGAAACAAAGATGACTTCCTCAT...GACCTCTTTTATGGCTAATACGACTAAGCAAGAATGGAGTACAGAATTAAGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS CAA 90 bp | TCCTATGTACCACTCCGGGGCTTTGTAACAAGCAGAGCTTTGGCCTaGGCTCTCTGCTCCTCCATAGGGGAGGAGACAGAGAGCCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SYVPLRGFVTSRALA*ALCSSIGEETESQG Trigger: GCCCTGGCTCTCTGTCTCCTCCCCTATGGAGGAGCAGAGAGCCAAGGCCAAAGCTCTGCTTGTTACAAAGCCCCGGAGTGGTACATAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000082424.12 ENSMUST00000159158.9 ENSMUST00000159216.10 ENSMUST00000160311.3 ENSMUST00000160787.10 ENSMUST00000160930.3 |
||
| CDS CAA 90 bp | CTGGGGGCTGCCTCGGACTCCTTAGACAACTTACACAGGAGCTGGTaGATGCACCCCCTTCGTCAGAGCTTCCTCTGGGCAAGTGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LGAASDSLDNLHRSW*MHPLRQSFLWASER Trigger: CCTTTCACTTGCCCAGAGGAAGCTCTGACGAAGGGGGTGCATCAACCAGCTCCTGTGTAAGTTGTCTAAGGAGTCCGAGGCAGCCCCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS CCA 72 bp | GCTGCCTCGGACTCCTTAGACAACTTACACAGGAGCTaGTTGATGCACCCCCTTCGTCAGAGCTTCCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: AASDSLDNLHRS*LMHPLRQSFLW Trigger: CCAGAGGAAGCTCTGACGAAGGGGGTGCATCAACCAGCTCCTGTGTAAGTTGTCTAAGGAGTCCGAGGCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS CAA 72 bp | GCCTCGGACTCCTTAGACAACTTACACAGGAGCTGGTaGATGCACCCCCTTCGTCAGAGCTTCCTCTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: ASDSLDNLHRSW*MHPLRQSFLWA Trigger: TGCCCAGAGGAAGCTCTGACGAAGGGGGTGCATCAACCAGCTCCTGTGTAAGTTGTCTAAGGAGTCCGAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS CAA 90 bp | TTCGTCAGAGCTTCCTCTGGGCAAGTGAAAGGTGCAAGCCTTCACTaGCTGTGGTGTCTCAGCTCTCTAAGTGACCCTGCCTGTGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: FVRASSGQVKGASLH*LWCLSSLSDPACAG Trigger: GCCAGCACAGGCAGGGTCACTTAGAGAGCTGAGACACCACAGCAAGTGAAGGCTTGCACCTTTCACTTGCCCAGAGGAAGCTCTGACGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
||
| CDS TCA 72 bp | GAAGGAGGCAGAGTCGTCTCTGATGGCCCTGGTTGCTaGTTCTCTGAAGGCTTACTGCTGCCAAGATGCTCC | + |
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Preference number: 6 (lower is better) Translates to: EGGRVVSDGPGC*FSEGLLLPRCS Trigger: GGAGCATCTTGGCAGCAGTAAGCCTTCAGAGAATCAGCAACCAGGGCCATCAGAGACGACTCTGCCTCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS TCA 72 bp | GATGCACCCCCTTCGTCAGAGCTTCCTCTGGGCAAGTaGAAGGTGCAAGCCTTCACTTGCTGTGGTGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: DAPPSSELPLGK*KVQAFTCCGVS Trigger: TGAGACACCACAGCAAGTGAAGGCTTGCACCTTTCACTTGCCCAGAGGAAGCTCTGACGAAGGGGGTGCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS GCA 72 bp | CCCCTTCGTCAGAGCTTCCTCTGGGCAAGTGAAAGGTaGAAGCCTTCACTTGCTGTGGTGTCTCAGCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: PLRQSFLWASER*KPSLAVVSQLS Trigger: AGAGAGCTGAGACACCACAGCAAGTGAAGGCTTGCACCTTTCACTTGCCCAGAGGAAGCTCTGACGAAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS CAA 72 bp | GCTTCCTCTGGGCAAGTGAAAGGTGCAAGCCTTCACTaGCTGTGGTGTCTCAGCTCTCTAAGTGACCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: ASSGQVKGASLH*LWCLSSLSDPA Trigger: GGCAGGGTCACTTAGAGAGCTGAGACACCACAGCAAGTGAAGGCTTGCACCTTTCACTTGCCCAGAGGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS CAA 90 bp | TTGATCTCCTATGTACCACTCCGGGGCTTTGTAACAAGCAGAGCTTaGGCCTTGGCTCTCTGCTCCTCCATAGGGGAGGAGACAGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: LISYVPLRGFVTSRA*ALALCSSIGEETES Trigger: GCTCTCTGTCTCCTCCCCTATGGAGGAGCAGAGAGCCAAGGCCAAAGCTCTGCTTGTTACAAAGCCCCGGAGTGGTACATAGGAGATCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000082424.12 ENSMUST00000159158.9 ENSMUST00000159216.10 ENSMUST00000160311.3 ENSMUST00000160787.10 ENSMUST00000160930.3 |
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| CDS TCA 72 bp | GGGGTTCATGGGCTGATTTTGTCAGGCAGCTGGAGGTaGCCTACACTGACAGGATTCAGTGACTTTCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: GVHGLILSGSWR*PTLTGFSDFLL Trigger: GAGGAGAAAGTCACTGAATCCTGTCAGTGTAGGTCACCTCCAGCTGCCTGACAAAATCAGCCCATGAACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS TCA 72 bp | CTGGATGCCTGCAGAAGACACAAGTATCAGCTGGCTTaGAGAAGAGCAACCACTGTCACTTTGCCCTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: LDACRRHKYQLA*RRATTVTLPSE Trigger: CTCAGAGGGCAAAGTGACAGTGGTTGCTCTTCTTCAAGCCAGCTGATACTTGTGTCTTCTGCAGGCATCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000082424.12 ENSMUST00000159158.9 ENSMUST00000159216.10 ENSMUST00000160311.3 ENSMUST00000160787.10 ENSMUST00000160930.3 |
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| CDS TCA 72 bp | TCCTGCCCATGTTTGTTGTGGTGTTTGTGGTGGCTATaGGCCTCTGAGGGCTCCGCAGTTTTATTGGCAGTA | + |
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Preference number: 6 (lower is better) Translates to: SCPCLLWCLWWL*ASEGSAVLLAV Trigger: TACTGCCAATAAAACTGCGGAGCCCTCAGAGGCTCATAGCCACCACAAACACCACAACAAACATGGGCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS TCA 72 bp | GAGGTTTTCCGCACACTGTCAAGCAATTGCAGACCCTaGCTTCTCAAATATGAGGTGGCGGCAGTGACAGCA | + |
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Preference number: 6 (lower is better) Translates to: EVFRTLSSNCRP*LLKYEVAAVTA Trigger: TGCTGTCACTGCCGCCACCTCATATTTGAGAAGTCAGGGTCTGCAATTGCTTGACAGTGTGCGGAAAACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS GCA 72 bp | ATGGCCCTGGTTGCTGATTCTCTGAAGGCTTACTGCTaGCAAGATGCTCCTGCCCATGTTTGTTGTGGTGTT | + |
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Preference number: 6 (lower is better) Translates to: MALVADSLKAYC*QDAPAHVCCGV Trigger: AACACCACAACAAACATGGGCAGGAGCATCTTGGCAGCAGTAAGCCTTCAGAGAATCAGCAACCAGGGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS CCA 72 bp | TCTGATTATCTCAGCTTCAGTTGGGGTTGGCTTCCATaGGGTTCATGGGCTGATTTTGTCAGGCAGCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: SDYLSFSWGWLP*GSWADFVRQLE Trigger: CTCCAGCTGCCTGACAAAATCAGCCCATGAACCCCATGGAAGCCAACCCCAACTGAAGCTGAGATAATCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS CCA 72 bp | CCAATCTGGATGCCTGCAGAAGACACAAGTATCAGCTaGCTTGAAGAAGAGCAACCACTGTCACTTTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: PIWMPAEDTSIS*LEEEQPLSLCP Trigger: AGGGCAAAGTGACAGTGGTTGCTCTTCTTCAAGCCAGCTGATACTTGTGTCTTCTGCAGGCATCCAGATTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000082424.12 ENSMUST00000159158.9 ENSMUST00000159216.10 ENSMUST00000160311.3 ENSMUST00000160787.10 ENSMUST00000160930.3 |
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| CDS CAA 72 bp | GAGCAACCACTGTCACTTTGCCCTCTGAGTTTAGCATaGGATTTTGATCTCCTATGTACCACTCCGGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: EQPLSLCPLSLA*DFDLLCTTPGL Trigger: AAGCCCCGGAGTGGTACATAGGAGATCAAAATCCAATGCTAAACTCAGAGGGCAAAGTGACAGTGGTTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000082424.12 ENSMUST00000159158.9 ENSMUST00000159216.10 ENSMUST00000160311.3 ENSMUST00000160787.10 ENSMUST00000160930.3 |
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| CDS CAA 90 bp | CTTGAAGAAGAGCAACCACTGTCACTTTGCCCTCTGAGTTTAGCATaGGATTTTGATCTCCTATGTACCACTCCGGGGCTTTGTAACAAG | + |
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Preference number: 6 (lower is better) Translates to: LEEEQPLSLCPLSLA*DFDLLCTTPGLCNK Trigger: CTTGTTACAAAGCCCCGGAGTGGTACATAGGAGATCAAAATCCAATGCTAAACTCAGAGGGCAAAGTGACAGTGGTTGCTCTTCTTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000082424.12 ENSMUST00000159158.9 ENSMUST00000159216.10 ENSMUST00000160311.3 ENSMUST00000160787.10 ENSMUST00000160930.3 |
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| CDS TCA 72 bp | TCACAGTTTTACAGAAGTCTTCATCTTCAAGACTCGTaGGATTGCAGTTTCCGCACCTCTCCTCACAGTAAG | + |
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Preference number: 6 (lower is better) Translates to: SQFYRSLHLQDS*DCSFRTSPHSK Trigger: CTTACTGTGAGGAGAGGTGCGGAAACTGCAATCTCACGAGTCTTGAAGATGAAGACTTCTGTAAAACTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082424.12 ENSMUST00000159216.10 |
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| CDS GCA 72 bp | ATCAGCTGGCTTGAAGAAGAGCAACCACTGTCACTTTaGCCTCTGAGTTTAGCATTGGATTTTGATCTCCTA | + |
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Preference number: 6 (lower is better) Translates to: ISWLEEEQPLSL*PLSLALDFDLL Trigger: TAGGAGATCAAAATCCAATGCTAAACTCAGAGGGCAAAGTGACAGTGGTTGCTCTTCTTCAAGCCAGCTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000082424.12 ENSMUST00000159158.9 ENSMUST00000159216.10 ENSMUST00000160311.3 ENSMUST00000160787.10 ENSMUST00000160930.3 |
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