Pregenerated sensors for SELENOO (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035757Ensembl transcript IDs: ENSMUST00000082439.6, ENSMUST00000130700.8
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GATGGGTCAGGTTTTGACTGGAGACCTCTGCCGTCATGGAGAGACTaGGGACAGGCATCCCAGCGGTCTCAGCAACTCAGCAGCACTGGG | + |
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Preference number: 1 (lower is better) Translates to: DGSGFDWRPLPSWRD*GQASQRSQQLSSTG Trigger: CCCAGTGCTGCTGAGTTGCTGAGACCGCTGGGATGCCTGTCCTCAGTCTCTCCATGACGGCAGAGGTCTCCAGTCAAAACCTGACCCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
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| 3UTR TCA 90 bp | GCTGAGGTGGCCATGCTAACACAGGCAGAAAACAAGCTGGGCCTGTaGTCCCAGCCTTCAGGATGCTGCTGTACAAGAGCACCGGTTGGA | + |
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Preference number: 1 (lower is better) Translates to: AEVAMLTQAENKLGL*SQPSGCCCTRAPVG Trigger: TCCAACCGGTGCTCTTGTACAGCAGCATCCTGAAGGCTGGGATCACAGGCCCAGCTTGTTTTCTGCCTGTGTTAGCATGGCCACCTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR GCA 90 bp | CGCTTTGTAGACCAAGATGACCTCAAACTTACAGAGATCTGCTCCTaGCTCCCAAGAGCTGGGATTAGAGGCATGTGCCACTACAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: RFVDQDDLKLTEICS*LPRAGIRGMCHYSP Trigger: TGGGCTGTAGTGGCACATGCCTCTAATCCCAGCTCTTGGGAGGCAGGAGCAGATCTCTGTAAGTTTGAGGTCATCTTGGTCTACAAAGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR TCA 90 bp | GAACAACCAAAGCCACCTGGAGACTCAATCTCAAAACCAAGAAGCTaGGGTGGCCATGCTAACACAGGCAGAAAACAAGCTGGGCCTGTG | + |
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Preference number: 1 (lower is better) Translates to: EQPKPPGDSISKPRS*GGHANTGRKQAGPV Trigger: CACAGGCCCAGCTTGTTTTCTGCCTGTGTTAGCATGGCCACCTCAGCTTCTTGGTTTTGAGATTGAGTCTCCAGGTGGCTTTGGTTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR GCA 90 bp | GCAGTTCAGGCTCCAATGCTTCAGCTAGTTTCTGCAGATTCCACTTaGATACCTGGGGCTGCTTACTGTATGTGTAGCGCCCAGCATTGT | + |
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Preference number: 1 (lower is better) Translates to: AVQAPMLQLVSADST*IPGAAYCMCSAQHC Trigger: ACAATGCTGGGCGCTACACATACAGTAAGCAGCCCCAGGTATGCAAGTGGAATCTGCAGAAACTAGCTGAAGCATTGGAGCCTGAACTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR GCA 90 bp | AAGTATTTTCCCACAGTGACAGGGTTCTGTGGCTCACCAGTCAGATaGATGGTCTCCAGAAGTTTGGCCACAAGTGTCCCATCTTCTTCC | + |
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Preference number: 1 (lower is better) Translates to: KYFPTVTGFCGSPVR*MVSRSLATSVPSSS Trigger: GGAAGAAGATGGGACACTTGTGGCCAAACTTCTGGAGACCATGCATCTGACTGGTGAGCCACAGAACCCTGTCACTGTGGGAAAATACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR GCA 90 bp | AGAACTCGCTTTGTAGACCAAGATGACCTCAAACTTACAGAGATCTaGTCCTGCCTCCCAAGAGCTGGGATTAGAGGCATGTGCCACTAC | + |
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Preference number: 1 (lower is better) Translates to: RTRFVDQDDLKLTEI*SCLPRAGIRGMCHY Trigger: GTAGTGGCACATGCCTCTAATCCCAGCTCTTGGGAGGCAGGAGCAGATCTCTGTAAGTTTGAGGTCATCTTGGTCTACAAAGCGAGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR CCA 90 bp | GTAGATAGTGCCTTTGGAACTCAGTGTCAAACTCCTCTTTTAGAATaGCCTCAGCCAGCGCAAGTGGCAGTTCAGGCTCCAATGCTTCAG | + |
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Preference number: 1 (lower is better) Translates to: VDSAFGTQCQTPLLE*PQPAQVAVQAPMLQ Trigger: CTGAAGCATTGGAGCCTGAACTGCCACTTGCGCTGGCTGAGGCCATTCTAAAAGAGGAGTTTGACACTGAGTTCCAAAGGCACTATCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR CCA 90 bp | GAAATAAGCCAGTCACAAGTGAGTCCATGGAGTTTCTCTACTGAGTaGTCAGGTTCACAGAAATTACAACGGGGGTACCAGGAAGGTAGA | + |
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Preference number: 1 (lower is better) Translates to: EISQSQVSPWSFSTE*SGSQKLQRGYQEGR Trigger: TCTACCTTCCTGGTACCCCCGTTGTAATTTCTGTGAACCTGACCACTCAGTAGAGAAACTCCATGGACTCACTTGTGACTGGCTTATTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGGTCCTCCCCTTTACCTGCAGGACTTGGGCAGCAGAGGCAGGTGGATCTTGAGGCAGAAAACAAGCTaGGCCTGTGATCCCAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: GGPPLYLQDLGSRGRWILRQKTS*ACDPSL Trigger: AAGGCTGGGATCACAGGCCCAGCTTGTTTTCTGCCT...CAAGATCCACCTGCCTCTGCTGCCCAAGTCCTGCAGGTAAAGGGGAGGACCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR-3UTR TCA 90 bp | TGCCCTTTGGGGCAAAATGCACACACAGGCCACAAGGCTTACTTACTTAGGCCTCCGTCATGGAGAGACTaGGGACAGGCATCCCAGCGG | + |
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Preference number: 2 (lower is better) Translates to: CPLGQNAHTGHKAYLLRPPSWRD*GQASQR Trigger: CCGCTGGGATGCCTGTCCTCAGTCTCTCCATGACGG...AGGCCTAAGTAAGTAAGCCTTGTGGCCTGTGTGTGCATTTTGCCCCAAAGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
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| 3UTR-3UTR TCA 90 bp | AACAGGTGTGAAGCCCTGCCCTTTGGGGCAAAATGCACACACAGGCCACAAGGCGTGCTAAGGGCGTGTTaGATGCTAGGCCAGGGTAGT | + |
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Preference number: 2 (lower is better) Translates to: NRCEALPFGAKCTHRPQGVLRAC*MLGQGS Trigger: ACTACCCTGGCCTAGCATTCAACACGCCCTTAGCAC...GCCTTGTGGCCTGTGTGTGCATTTTGCCCCAAAGGGCAGGGCTTCACACCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
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| 3UTR-3UTR TCA 90 bp | CAAGCTGGGCCTGTGATCCCAGCCTTCAGGATGCTGCTGTACAAGAGCACCGGTAGTATTTTCCCACAGTaGCAGGGTTCTGTGGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: QAGPVIPAFRMLLYKSTGSIFPQ*QGSVAH Trigger: GTGAGCCACAGAACCCTGTCACTGTGGGAAAATACT...ACCGGTGCTCTTGTACAGCAGCATCCTGAAGGCTGGGATCACAGGCCCAGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR-3UTR TCA 90 bp | GGTGGTCCTCCCCTTTACCTGCAGGACTTGGGCAGCAGAGGCAGGTGGATCTTGGGATCGTCTGTGGAATaGAATAAGCCAGTCACAAGT | + |
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Preference number: 2 (lower is better) Translates to: GGPPLYLQDLGSRGRWILGSSVE*NKPVTS Trigger: ACTTGTGACTGGCTTATTTCATTCCACAGACGATCC...CAAGATCCACCTGCCTCTGCTGCCCAAGTCCTGCAGGTAAAGGGGAGGACCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR-3UTR CCA 90 bp | TTTAGAGGCCCAGGAGATTCAACAGGTGTGAAGCCCTGCCCTTTGGGGCAAAATGGGTCAGGTTTTGACTaGAGACCTCTGCCGTCATGG | + |
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Preference number: 2 (lower is better) Translates to: FRGPGDSTGVKPCPLGQNGSGFD*RPLPSW Trigger: CCATGACGGCAGAGGTCTCCAGTCAAAACCTGACCC...ATTTTGCCCCAAAGGGCAGGGCTTCACACCTGTTGAATCTCCTGGGCCTCTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
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| 3UTR-3UTR GCA 90 bp | CTCAGCCTCACTGCTGTCTATAAAGTGCCTGCTTTCGGTCTGAGTGTGTTGAGAGGCACGTGCCCTTATTaGCAGCAACAGGCAGATCTC | + |
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Preference number: 2 (lower is better) Translates to: LSLTAVYKVPAFGLSVLRGTCPY*QQQADL Trigger: GAGATCTGCCTGTTGCTGGCAATAAGGGCACGTGCC...TCTCAACACACTCAGACCGAAAGCAGGCACTTTATAGACAGCAGTGAGGCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR-3UTR CCA 90 bp | AGCGCAAGTGGCAGTTCAGGCTCCAATGCTTCAGCTAGTTTCTGCAGATTCCACGTGTTGAGCACGCCATaGCAAAAGCCAACACACTGC | + |
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Preference number: 2 (lower is better) Translates to: SASGSSGSNASASFCRFHVLSTP*QKPTHC Trigger: GCAGTGTGTTGGCTTTTGCCATGGCGTGCTCAACAC...GTGGAATCTGCAGAAACTAGCTGAAGCATTGGAGCCTGAACTGCCACTTGCGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR CAA 90 bp | ACAGGGTTCTGTGGCTCACCAGTCAGATGCATGGTCTCCAGAAGTTaGGCCACAAGTGTCCCATCTTCTTCCTTCTCCACTCGAATAAGG | + |
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Preference number: 2 (lower is better) Translates to: TGFCGSPVRCMVSRS*ATSVPSSSFSTRIR Trigger: CCTTATTCGAGTGGAGAAGGAAGAAGATGGGACACTTGTGGCCAAACTTCTGGAGACCATGCATCTGACTGGTGAGCCACAGAACCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR-3UTR CCA 90 bp | GTTGACAGATGGGAAATCCGTGACTCAGCCTCACTGCTGTCTATAAAGTGCCTGCACCAGTCAGATGCATaGTCTCCAGAAGTTTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: VDRWEIRDSASLLSIKCLHQSDA*SPEVWP Trigger: TGGCCAAACTTCTGGAGACCATGCATCTGACTGGTG...CAGGCACTTTATAGACAGCAGTGAGGCTGAGTCACGGATTTCCCATCTGTCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR CAA 90 bp | AGAATGTCAGTTTGGGAACTGGGGCTGCTTTCAGTGCCACTGAGTTaGGAGAACACTAAGTATTTTCCCACAGTGACAGGGTTCTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: RMSVWELGLLSVPLS*ENTKYFPTVTGFCG Trigger: GCCACAGAACCCTGTCACTGTGGGAAAATACTTAGTGTTCTCCAAACTCAGTGGCACTGAAAGCAGCCCCAGTTCCCAAACTGACATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR-3UTR GCA 90 bp | TGGAATGAAATAAGCCAGTCACAAGTGAGTCCATGGAGTTTCTCTACTGAGTGGGGCTCACCAGTCAGATaGATGGTCTCCAGAAGTTTG | + |
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Preference number: 2 (lower is better) Translates to: WNEISQSQVSPWSFSTEWGSPVR*MVSRSL Trigger: CAAACTTCTGGAGACCATGCATCTGACTGGTGAGCC...CCACTCAGTAGAGAAACTCCATGGACTCACTTGTGACTGGCTTATTTCATTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR-3UTR TCA 90 bp | AGTTCTAAGTCTAGTCAGGAACAAAGCACAGATGCTCATCTTAGCTGCTTCTACTCATGTTGTCAGTGTTaGGCACGCCATGGCAAAAGC | + |
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Preference number: 2 (lower is better) Translates to: SSKSSQEQSTDAHLSCFYSCCQC*ARHGKS Trigger: GCTTTTGCCATGGCGTGCTCAACACTGACAACATGA...GTAGAAGCAGCTAAGATGAGCATCTGTGCTTTGTTCCTGACTAGACTTAGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR-3UTR GCA 90 bp | CTAAGTCTAGTCAGGAACAAAGCACAGATGCTCATCTTAGCTGCTTCTACTCAATCTGCAGATTCCACTTaGATACCTGGGGCTGCTTAC | + |
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Preference number: 2 (lower is better) Translates to: LSLVRNKAQMLILAASTQSADST*IPGAAY Trigger: GTAAGCAGCCCCAGGTATGCAAGTGGAATCTGCAGA...TTGAGTAGAAGCAGCTAAGATGAGCATCTGTGCTTTGTTCCTGACTAGACTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR-3UTR GCA 90 bp | AGTTCTAAGTCTAGTCAGGAACAAAGCACAGATGCTCATCTTAGCTGCTTCTACAGTTCAGACACATGCTaGAACGTGGAAGAACCCAGG | + |
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Preference number: 2 (lower is better) Translates to: SSKSSQEQSTDAHLSCFYSSDTC*NVEEPR Trigger: CCTGGGTTCTTCCACGTTGCAGCATGTGTCTGAACT...GTAGAAGCAGCTAAGATGAGCATCTGTGCTTTGTTCCTGACTAGACTTAGAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR-3UTR CCA 90 bp | GTTGACAGATGGGAAATCCGTGACTCAGCCTCACTGCTGTCTATAAAGTGCCTGAGTTTCTCTACTGAGTaGTCAGGTTCACAGAAATTA | + |
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Preference number: 2 (lower is better) Translates to: VDRWEIRDSASLLSIKCLSFSTE*SGSQKL Trigger: TAATTTCTGTGAACCTGACCACTCAGTAGAGAAACT...CAGGCACTTTATAGACAGCAGTGAGGCTGAGTCACGGATTTCCCATCTGTCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR-3UTR CCA 90 bp | AGTTCTAAGTCTAGTCAGGAACAAAGCACAGATGCTCATCTTAGCTGCTTCTACTACCAGGAAGGTAGATaGAGAGTAGTTAGAGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: SSKSSQEQSTDAHLSCFYYQEGR*RVVRAD Trigger: GTCTGCTCTAACTACTCTCCATCTACCTTCCTGGTA...GTAGAAGCAGCTAAGATGAGCATCTGTGCTTTGTTCCTGACTAGACTTAGAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR CCA 72 bp | CCAGCCTTCAGGATGCTGCTGTACAAGAGCACCGGTTaGAGGCCAGCCTGGGCTAGACTGTCTCCAGACAAG | + |
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Preference number: 3 (lower is better) Translates to: PAFRMLLYKSTG*RPAWARLSPDK Trigger: CTTGTCTGGAGACAGTCTAGCCCAGGCTGGCCTCCAACCGGTGCTCTTGTACAGCAGCATCCTGAAGGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR TCA 72 bp | GGTTTTGACTGGAGACCTCTGCCGTCATGGAGAGACTaGGGACAGGCATCCCAGCGGTCTCAGCAACTCAGC | + |
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Preference number: 3 (lower is better) Translates to: GFDWRPLPSWRD*GQASQRSQQLS Trigger: GCTGAGTTGCTGAGACCGCTGGGATGCCTGTCCTCAGTCTCTCCATGACGGCAGAGGTCTCCAGTCAAAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
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| 3UTR-3UTR CAA 90 bp | CAAGCTGGGCCTGTGATCCCAGCCTTCAGGATGCTGCTGTACAAGAGCACCGGTAGACAGAATGTCAGTTaGGGAACTGGGGCTGCTTTC | + |
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Preference number: 3 (lower is better) Translates to: QAGPVIPAFRMLLYKSTGRQNVS*GTGAAF Trigger: GAAAGCAGCCCCAGTTCCCAAACTGACATTCTGTCT...ACCGGTGCTCTTGTACAGCAGCATCCTGAAGGCTGGGATCACAGGCCCAGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR-3UTR CAA 90 bp | CAGGACTTGGGCAGCAGAGGCAGGTGGATCTTGAGTTTCAAGGCCAAACTGGTCGCAATGGAGAGCTGGTaGACAGATGGGAAATCCGTG | + |
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Preference number: 3 (lower is better) Translates to: QDLGSRGRWILSFKAKLVAMESW*TDGKSV Trigger: CACGGATTTCCCATCTGTCAACCAGCTCTCCATTGC...GACCAGTTTGGCCTTGAAACTCAAGATCCACCTGCCTCTGCTGCCCAAGTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR GCA 72 bp | GACCAAGATGACCTCAAACTTACAGAGATCTGCTCCTaGCTCCCAAGAGCTGGGATTAGAGGCATGTGCCAC | + |
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Preference number: 3 (lower is better) Translates to: DQDDLKLTEICS*LPRAGIRGMCH Trigger: GTGGCACATGCCTCTAATCCCAGCTCTTGGGAGGCAGGAGCAGATCTCTGTAAGTTTGAGGTCATCTTGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR CCA 72 bp | GCCTTTGGAACTCAGTGTCAAACTCCTCTTTTAGAATaGCCTCAGCCAGCGCAAGTGGCAGTTCAGGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: AFGTQCQTPLLE*PQPAQVAVQAP Trigger: TGGAGCCTGAACTGCCACTTGCGCTGGCTGAGGCCATTCTAAAAGAGGAGTTTGACACTGAGTTCCAAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR-3UTR CAA 90 bp | GCCCTTATTGCCAGCAACAGGCAGATCTCTGAGCTCAACGCCAGTCTGGTATATATGGTCTCCAGAAGTTaGGCCACAAGTGTCCCATCT | + |
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Preference number: 3 (lower is better) Translates to: ALIASNRQISELNASLVYMVSRS*ATSVPS Trigger: AGATGGGACACTTGTGGCCAAACTTCTGGAGACCAT...ATATACCAGACTGGCGTTGAGCTCAGAGATCTGCCTGTTGCTGGCAATAAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR GCA 72 bp | GCTCCAATGCTTCAGCTAGTTTCTGCAGATTCCACTTaGATACCTGGGGCTGCTTACTGTATGTGTAGCGCC | + |
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Preference number: 3 (lower is better) Translates to: APMLQLVSADST*IPGAAYCMCSA Trigger: GGCGCTACACATACAGTAAGCAGCCCCAGGTATGCAAGTGGAATCTGCAGAAACTAGCTGAAGCATTGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR GCA 72 bp | AGTGGCAGTTCAGGCTCCAATGCTTCAGCTAGTTTCTaGAGATTCCACTTGCATACCTGGGGCTGCTTACTG | + |
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Preference number: 3 (lower is better) Translates to: SGSSGSNASASF*RFHLHTWGCLL Trigger: CAGTAAGCAGCCCCAGGTATGCAAGTGGAATCTGCAGAAACTAGCTGAAGCATTGGAGCCTGAACTGCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR CCA 72 bp | CCAGCAACAGGCAGATCTCTGAGCTCAACGCCAGTCTaGTATATGCTGAGTTCTAGAACAACCAAAGCCACC | + |
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Preference number: 3 (lower is better) Translates to: PATGRSLSSTPV*YMLSSRTTKAT Trigger: GGTGGCTTTGGTTGTTCTAGAACTCAGCATATACCAGACTGGCGTTGAGCTCAGAGATCTGCCTGTTGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR TCA 72 bp | ACCTGCAGGACTTGGGCAGCAGAGGCAGGTGGATCTTaGGTTTCAAGGCCAAACTGGTCTCTTCAAAACAAA | + |
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Preference number: 3 (lower is better) Translates to: TCRTWAAEAGGS*VSRPNWSLQNK Trigger: TTTGTTTTGAAGAGACCAGTTTGGCCTTGAAACTCAAGATCCACCTGCCTCTGCTGCCCAAGTCCTGCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR CCA 72 bp | ACATGCTGCAACGTGGAAGAACCCAGGGATCGTCTGTaGAATGAAATAAGCCAGTCACAAGTGAGTCCATGG | + |
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Preference number: 3 (lower is better) Translates to: TCCNVEEPRDRL*NEISQSQVSPW Trigger: CCATGGACTCACTTGTGACTGGCTTATTTCATTCCACAGACGATCCCTGGGTTCTTCCACGTTGCAGCATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR GCA 72 bp | TTTGTAGACCAAGATGACCTCAAACTTACAGAGATCTaGTCCTGCCTCCCAAGAGCTGGGATTAGAGGCATG | + |
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Preference number: 3 (lower is better) Translates to: FVDQDDLKLTEI*SCLPRAGIRGM Trigger: CATGCCTCTAATCCCAGCTCTTGGGAGGCAGGAGCAGATCTCTGTAAGTTTGAGGTCATCTTGGTCTACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR-3UTR CAA 90 bp | TGGAATGAAATAAGCCAGTCACAAGTGAGTCCATGGAGTTTCTCTACTGAGTGGCTCATGTTGTCAGTGTaGAGCACGCCATGGCAAAAG | + |
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Preference number: 3 (lower is better) Translates to: WNEISQSQVSPWSFSTEWLMLSV*STPWQK Trigger: CTTTTGCCATGGCGTGCTCAACACTGACAACATGAG...CCACTCAGTAGAGAAACTCCATGGACTCACTTGTGACTGGCTTATTTCATTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR-3UTR CAA 90 bp | AATGAAATAAGCCAGTCACAAGTGAGTCCATGGAGTTTCTCTACTGAGTGGTCACCCACAATGCTCATGTaGTCAGTGTTGAGCACGCCA | + |
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Preference number: 3 (lower is better) Translates to: NEISQSQVSPWSFSTEWSPTMLM*SVLSTP Trigger: TGGCGTGCTCAACACTGACAACATGAGCATTGTGGG...TGACCACTCAGTAGAGAAACTCCATGGACTCACTTGTGACTGGCTTATTTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR TCA 72 bp | TATTCTAGCATGAAGCACTGTGTGCTAAGGGCGTGTTaGATGCTAGGCCAGGGTAGTACTGCTAAGGTAGTA | + |
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Preference number: 3 (lower is better) Translates to: YSSMKHCVLRAC*MLGQGSTAKVV Trigger: TACTACCTTAGCAGTACTACCCTGGCCTAGCATTCAACACGCCCTTAGCACACAGTGCTTCATGCTAGAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
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| 3UTR TCA 72 bp | AAGCCAGTCACAAGTGAGTCCATGGAGTTTCTCTACTaGGTGGTCAGGTTCACAGAAATTACAACGGGGGTA | + |
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Preference number: 3 (lower is better) Translates to: KPVTSESMEFLY*VVRFTEITTGV Trigger: TACCCCCGTTGTAATTTCTGTGAACCTGACCACTCAGTAGAGAAACTCCATGGACTCACTTGTGACTGGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR-3UTR CAA 90 bp | GTTGACAGATGGGAAATCCGTGACTCAGCCTCACTGCTGTCTATAAAGTGCCTGTCAGTGCCACTGAGTTaGGAGAACACTAAGTATTTT | + |
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Preference number: 3 (lower is better) Translates to: VDRWEIRDSASLLSIKCLSVPLS*ENTKYF Trigger: AAAATACTTAGTGTTCTCCAAACTCAGTGGCACTGA...CAGGCACTTTATAGACAGCAGTGAGGCTGAGTCACGGATTTCCCATCTGTCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR GCA 72 bp | TCAGCATTAAAAATGGAGGTAAGTTCAGACACATGCTaGAACGTGGAAGAACCCAGGGATCGTCTGTGGAAT | + |
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Preference number: 3 (lower is better) Translates to: SALKMEVSSDTC*NVEEPRDRLWN Trigger: ATTCCACAGACGATCCCTGGGTTCTTCCACGTTGCAGCATGTGTCTGAACTTACCTCCATTTTTAATGCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR CCA 72 bp | TCACAGAAATTACAACGGGGGTACCAGGAAGGTAGATaGAGAGTAGTTAGAGCAGACAGAATGTCAGTTTGG | + |
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Preference number: 3 (lower is better) Translates to: SQKLQRGYQEGR*RVVRADRMSVW Trigger: CCAAACTGACATTCTGTCTGCTCTAACTACTCTCCATCTACCTTCCTGGTACCCCCGTTGTAATTTCTGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR CCA 72 bp | TGGTATATGCTGAGTTCTAGAACAACCAAAGCCACCTaGAGACTCAATCTCAAAACCAAGAAGCTGAGGTGG | + |
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Preference number: 3 (lower is better) Translates to: WYMLSSRTTKAT*RLNLKTKKLRW Trigger: CCACCTCAGCTTCTTGGTTTTGAGATTGAGTCTCCAGGTGGCTTTGGTTGTTCTAGAACTCAGCATATACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
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| 3UTR GCA 72 bp | TCTAGTCAGGAACAAAGCACAGATGCTCATCTTAGCTaGTTCTACTCAATACAGTGTGGAAACCAGAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SSQEQSTDAHLS*FYSIQCGNQSC Trigger: ACAGCTCTGGTTTCCACACTGTATTGAGTAGAAGCAGCTAAGATGAGCATCTGTGCTTTGTTCCTGACTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
||
| 3UTR TCA 72 bp | TTCAAAGCAGCACTCTATGTAACAGCTGATGAGCCCTaGGGGGTCATTACTATACAACTAGATAGTCAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: FKAALYVTADEP*GVITIQLDSQH Trigger: ATGCTGACTATCTAGTTGTATAGTAATGACCCCTCAGGGCTCATCAGCTGTTACATAGAGTGCTGCTTTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGCACTGGGGAGGCCTCGGGAGACTCCAGACAAGTGGAGGACACCGAGGCCCATCTCGTCCCACGCTaGGGCCTGCACGCCCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSTGEASGDSRQVEDTEAHLVPR*GLHALC Trigger: ACACAGGGCGTGCAGGCCCCAGCGTGGGACGAGATG...GGCCTCGGTGTCCTCCACTTGTCTGGAGTCTCCCGAGGCCTCCCCAGTGCTGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR TCA 90 bp | GCCGTCATGGAGAGACTGAGGACAGGCATCCCAGCGGTCTCAGCAACTCAGCAGGCTCAGGAACTCTGCTaGGTCCGACAGGTCAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: AVMERLRTGIPAVSATQQAQELC*VRQVSR Trigger: CCGGCTGACCTGTCGGACTCAGCAGAGTTCCTGAGC...CTGCTGAGTTGCTGAGACCGCTGGGATGCCTGTCCTCAGTCTCTCCATGACGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR GCA 90 bp | AGAGGCCCAGGAGATTCAACAGGTGTGAAGCCCTGCCCTTTGGGGCAAAATGCACCGGCGCCTTTGAGCTaGAGCTCCCAGCGCTCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RGPGDSTGVKPCPLGQNAPAPLS*SSQRSP Trigger: CGGCGAGCGCTGGGAGCTGCAGCTCAAAGGCGCCGG...TGCATTTTGCCCCAAAGGGCAGGGCTTCACACCTGTTGAATCTCCTGGGCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR CCA 90 bp | CGTCATGGAGAGACTGAGGACAGGCATCCCAGCGGTCTCAGCAACTCAGCAGCAGACCATCGGCTTGTCTaGAGAAGGGCGTGGGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RHGETEDRHPSGLSNSAADHRLV*RRAWGR Trigger: CCGGCCCCACGCCCTTCTCCAGACAAGCCGATGGTC...TGCTGCTGAGTTGCTGAGACCGCTGGGATGCCTGTCCTCAGTCTCTCCATGACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR CCA 90 bp | GTGGCACGTGCCCTTATTGCCAGCAACAGGCAGATCTCTGAGCTCAACGCCAGTCCTCGCCCAGGTACATaGCGGCACCGTCGCCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: VARALIASNRQISELNASPRPGT*RHRRPT Trigger: AGTTGGGCGACGGTGCCGCCATGTACCTGGGCGAGG...ACTGGCGTTGAGCTCAGAGATCTGCCTGTTGCTGGCAATAAGGGCACGTGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
||
| CDS-3UTR CCA 90 bp | TCTGCCGTCATGGAGAGACTGAGGACAGGCATCCCAGCGGTCTCAGCAACTCAGCCCCGGCCCTCGTGGTaGGGATTCCCAGGTGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SAVMERLRTGIPAVSATQPRPSW*GFPGET Trigger: TGTTTCACCTGGGAATCCCCACCACGAGGGCCGGGG...CTGAGTTGCTGAGACCGCTGGGATGCCTGTCCTCAGTCTCTCCATGACGGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR CCA 90 bp | GCCGTCATGGAGAGACTGAGGACAGGCATCCCAGCGGTCTCAGCAACTCAGCAGTCCAGAGAGGCACACTaGGAGGTCAGCCTGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AVMERLRTGIPAVSATQQSREAH*EVSLLR Trigger: CCTGAGCAGGCTGACCTCCCAGTGTGCCTCTCTGGA...CTGCTGAGTTGCTGAGACCGCTGGGATGCCTGTCCTCAGTCTCTCCATGACGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR GCA 90 bp | GTGAAGCCCTGCCCTTTGGGGCAAAATGCACACACAGGCCACAAGGCTTACTTAGCTCGCCGGCCGCTGTaGACACCTCGCCCAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: VKPCPLGQNAHTGHKAYLARRPL*TPRPGT Trigger: TGTACCTGGGCGAGGTGTGCACAGCGGCCGGCGAGC...TAAGTAAGCCTTGTGGCCTGTGTGTGCATTTTGCCCCAAAGGGCAGGGCTTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR GCA 90 bp | CAGGCTCCAATGCTTCAGCTAGTTTCTGCAGATTCCACTTGCATACCTGGGGCTCCGGCGCCTTTGAGCTaGAGCTCCCAGCGCTCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QAPMLQLVSADSTCIPGAPAPLS*SSQRSP Trigger: CGGCGAGCGCTGGGAGCTGCAGCTCAAAGGCGCCGG...AGCCCCAGGTATGCAAGTGGAATCTGCAGAAACTAGCTGAAGCATTGGAGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
||
| CDS-3UTR GCA 90 bp | GATTCAACAGGTGTGAAGCCCTGCCCTTTGGGGCAAAATGCACACACAGGCCACTCCCACGCTGGGGCCTaGACGCCCTGTGTGCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: DSTGVKPCPLGQNAHTGHSHAGA*TPCVLI Trigger: GATGAGCACACAGGGCGTGCAGGCCCCAGCGTGGGA...GTGGCCTGTGTGTGCATTTTGCCCCAAAGGGCAGGGCTTCACACCTGTTGAATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR GCA 90 bp | GCCGTCATGGAGAGACTGAGGACAGGCATCCCAGCGGTCTCAGCAACTCAGCAGTCTCTGTTCTTGCGCTaGAGGTCAGAGGGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AVMERLRTGIPAVSATQQSLFLR*RSEGLS Trigger: GCTGAGCCCCTCTGACCTGCAGCGCAAGAACAGAGA...CTGCTGAGTTGCTGAGACCGCTGGGATGCCTGTCCTCAGTCTCTCCATGACGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR CCA 90 bp | AGCAGCACTGGGGAGGCCTCGGGAGACTCCAGACAAGTGGAGGACACCGAGGCCTTCCCAGGTGAAACATaGCTTCGCTGCACAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: SSTGEASGDSRQVEDTEAFPGET*LRCTGT Trigger: AGTTCCTGTGCAGCGAAGCCATGTTTCACCTGGGAA...GGCCTCGGTGTCCTCCACTTGTCTGGAGTCTCCCGAGGCCTCCCCAGTGCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR TCA 90 bp | CAAGCTGGGCCTGTGATCCCAGCCTTCAGGATGCTGCTGTACAAGAGCACCGGTGTGGGGATTCCCAGGTaGAACATGGCTTCGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QAGPVIPAFRMLLYKSTGVGIPR*NMASLH Trigger: GTGCAGCGAAGCCATGTTTCACCTGGGAATCCCCAC...ACCGGTGCTCTTGTACAGCAGCATCCTGAAGGCTGGGATCACAGGCCCAGCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
||
| CDS-3UTR GCA 90 bp | TCTGCCGTCATGGAGAGACTGAGGACAGGCATCCCAGCGGTCTCAGCAACTCAGAGTGGTCTCTGTTCTTaGGCTGCAGGTCAGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SAVMERLRTGIPAVSATQSGLCS*AAGQRG Trigger: GCCCCTCTGACCTGCAGCGCAAGAACAGAGACCACT...CTGAGTTGCTGAGACCGCTGGGATGCCTGTCCTCAGTCTCTCCATGACGGCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR TCA 90 bp | GGCCCAGGAGATTCAACAGGTGTGAAGCCCTGCCCTTTGGGGCAAAATGCACACGTGGGGATTCCCAGGTaGAACATGGCTTCGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GPGDSTGVKPCPLGQNAHVGIPR*NMASLH Trigger: GTGCAGCGAAGCCATGTTTCACCTGGGAATCCCCAC...GTGTGCATTTTGCCCCAAAGGGCAGGGCTTCACACCTGTTGAATCTCCTGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR CCA 90 bp | GTATCAGACAGAGATGGGTCAGGTTTTGACTGGAGACCTCTGCCGTCATGGAGACCTCGCCCAGGTACATaGCGGCACCGTCGCCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: VSDRDGSGFDWRPLPSWRPRPGT*RHRRPT Trigger: AGTTGGGCGACGGTGCCGCCATGTACCTGGGCGAGG...TCTCCATGACGGCAGAGGTCTCCAGTCAAAACCTGACCCATCTCTGTCTGATAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR CCA 90 bp | GCCCTTATTGCCAGCAACAGGCAGATCTCTGAGCTCAACGCCAGTCTGGTATATGACCATCGGCTTGTCTaGAGAAGGGCGTGGGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ALIASNRQISELNASLVYDHRLV*RRAWGR Trigger: CCGGCCCCACGCCCTTCTCCAGACAAGCCGATGGTC...ATATACCAGACTGGCGTTGAGCTCAGAGATCTGCCTGTTGCTGGCAATAAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
||
| CDS-3UTR TCA 90 bp | GCCGTCATGGAGAGACTGAGGACAGGCATCCCAGCGGTCTCAGCAACTCAGCAGTCATGTTGTCAGTGTTaGGCACGCCATGGCAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AVMERLRTGIPAVSATQQSCCQC*ARHGKS Trigger: GCTTTTGCCATGGCGTGCTCAACACTGACAACATGA...CTGCTGAGTTGCTGAGACCGCTGGGATGCCTGTCCTCAGTCTCTCCATGACGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR GCA 90 bp | TCTGCCGTCATGGAGAGACTGAGGACAGGCATCCCAGCGGTCTCAGCAACTCAGCCTGCACGCCCTGTGTaGTCATCAGGAGGCTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SAVMERLRTGIPAVSATQPARPV*SSGGLK Trigger: TTTTAAGCCTCCTGATGAGCACACAGGGCGTGCAGG...CTGAGTTGCTGAGACCGCTGGGATGCCTGTCCTCAGTCTCTCCATGACGGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR CCA 90 bp | CAGATTCCACTTGCATACCTGGGGCTGCTTACTGTATGTGTAGCGCCCAGCATTCCCCGGCCCTCGTGGTaGGGATTCCCAGGTGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: QIPLAYLGLLTVCVAPSIPRPSW*GFPGET Trigger: TGTTTCACCTGGGAATCCCCACCACGAGGGCCGGGG...AATGCTGGGCGCTACACATACAGTAAGCAGCCCCAGGTATGCAAGTGGAATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
||
| CDS-3UTR CCA 90 bp | ATGGTCTCCAGAAGTTTGGCCACAAGTGTCCCATCTTCTTCCTTCTCCACTCGACATCTCGTCCCACGCTaGGGCCTGCACGCCCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: MVSRSLATSVPSSSFSTRHLVPR*GLHALC Trigger: ACACAGGGCGTGCAGGCCCCAGCGTGGGACGAGATG...TCGAGTGGAGAAGGAAGAAGATGGGACACTTGTGGCCAAACTTCTGGAGACCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGCCCAGGAGATTCAACAGGTGTGAAGCCCTGCCCTTTGGGGCAAAATGCACTGCTTCAGGGCCTGTaGCCTCCTCTTCACTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RGPGDSTGVKPCPLGQNALLQGL*PPLHCG Trigger: ACCACAGTGAAGAGGAGGCCACAGGCCCTGAAGCAG...TGCATTTTGCCCCAAAGGGCAGGGCTTCACACCTGTTGAATCTCCTGGGCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR CCA 90 bp | GGCCCAGGAGATTCAACAGGTGTGAAGCCCTGCCCTTTGGGGCAAAATGCACACTGCTGCCCAGAGGGGTaGCCTGTTACTGTAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GPGDSTGVKPCPLGQNAHCCPEG*PVTVGR Trigger: TCTTCCTACAGTAACAGGCCACCCCTCTGGGCAGCA...GTGTGCATTTTGCCCCAAAGGGCAGGGCTTCACACCTGTTGAATCTCCTGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR TCA 90 bp | TCTGCCGTCATGGAGAGACTGAGGACAGGCATCCCAGCGGTCTCAGCAACTCAGTGGCTTGAGTACCAATaGGTGCAAAGAGCTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SAVMERLRTGIPAVSATQWLEYQ*VQRAVG Trigger: ACCCACAGCTCTTTGCACTCATTGGTACTCAAGCCA...CTGAGTTGCTGAGACCGCTGGGATGCCTGTCCTCAGTCTCTCCATGACGGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR GCA 90 bp | GTGGCACGTGCCCTTATTGCCAGCAACAGGCAGATCTCTGAGCTCAACGCCAGTCCTGCACGCCCTGTGTaGTCATCAGGAGGCTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VARALIASNRQISELNASPARPV*SSGGLK Trigger: TTTTAAGCCTCCTGATGAGCACACAGGGCGTGCAGG...ACTGGCGTTGAGCTCAGAGATCTGCCTGTTGCTGGCAATAAGGGCACGTGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGAGATTCAACAGGTGTGAAGCCCTGCCCTTTGGGGCAAAATGCACACACACGTACACGTTCTGCCTaGCAGGCAGCAGTGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PGDSTGVKPCPLGQNAHTRTRSA*QAAVSP Trigger: TGGAGACACTGCTGCCTGGCAGGCAGAACGTGTACG...TGTGTGTGCATTTTGCCCCAAAGGGCAGGGCTTCACACCTGTTGAATCTCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR GCA 90 bp | TTTAGAGGCCCAGGAGATTCAACAGGTGTGAAGCCCTGCCCTTTGGGGCAAAATAGTGCTCCTTGCCACTaGTTCAGGGCCTGTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FRGPGDSTGVKPCPLGQNSAPCH*FRACGL Trigger: GAGGCCACAGGCCCTGAAGCAGTGGCAAGGAGCACT...ATTTTGCCCCAAAGGGCAGGGCTTCACACCTGTTGAATCTCCTGGGCCTCTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR GCA 90 bp | CCAGGAGATTCAACAGGTGTGAAGCCCTGCCCTTTGGGGCAAAATGCACACACACTCCTCAGTGCTCCTTaGCACTGCTTCAGGGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PGDSTGVKPCPLGQNAHTLLSAP*HCFRAC Trigger: ACAGGCCCTGAAGCAGTGGCAAGGAGCACTGAGGAG...TGTGTGTGCATTTTGCCCCAAAGGGCAGGGCTTCACACCTGTTGAATCTCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR CCA 90 bp | TCAGACAGAGATGGGTCAGGTTTTGACTGGAGACCTCTGCCGTCATGGAGAGACTCCGTGTCACAGGTATaGGCAGCCTGGATCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SDRDGSGFDWRPLPSWRDSVSQV*AAWISG Trigger: CCCTGAGATCCAGGCTGCCCATACCTGTGACACGGA...GTCTCTCCATGACGGCAGAGGTCTCCAGTCAAAACCTGACCCATCTCTGTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR CCA 90 bp | TCTGCCGTCATGGAGAGACTGAGGACAGGCATCCCAGCGGTCTCAGCAACTCAGGAGTGCAAAGAGCTGTaGGTTCGACTGTGCAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SAVMERLRTGIPAVSATQECKEL*VRLCKH Trigger: ATGCTTGCACAGTCGAACCCACAGCTCTTTGCACTC...CTGAGTTGCTGAGACCGCTGGGATGCCTGTCCTCAGTCTCTCCATGACGGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR GCA 90 bp | TGGAATGAAATAAGCCAGTCACAAGTGAGTCCATGGAGTTTCTCTACTGAGTGGGCTCGCCGGCCGCTGTaGACACCTCGCCCAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: WNEISQSQVSPWSFSTEWARRPL*TPRPGT Trigger: TGTACCTGGGCGAGGTGTGCACAGCGGCCGGCGAGC...CCACTCAGTAGAGAAACTCCATGGACTCACTTGTGACTGGCTTATTTCATTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
||
| CDS-3UTR GCA 90 bp | CGTCATGGAGAGACTGAGGACAGGCATCCCAGCGGTCTCAGCAACTCAGCAGCATCAGCACCAGTCAGATaGATGGTCTCCAGAAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RHGETEDRHPSGLSNSAASAPVR*MVSRSL Trigger: CAAACTTCTGGAGACCATGCATCTGACTGGTGCTGA...TGCTGCTGAGTTGCTGAGACCGCTGGGATGCCTGTCCTCAGTCTCTCCATGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR GCA 90 bp | TTTAGAGGCCCAGGAGATTCAACAGGTGTGAAGCCCTGCCCTTTGGGGCAAAATGACACGTACACGTTCTaGCTGCCAGGCAGCAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FRGPGDSTGVKPCPLGQNDTYTF*LPGSSV Trigger: GACACTGCTGCCTGGCAGGCAGAACGTGTACGTGTC...ATTTTGCCCCAAAGGGCAGGGCTTCACACCTGTTGAATCTCCTGGGCCTCTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR CCA 90 bp | ACCAAAGCCACCTGGAGACTCAATCTCAAAACCAAGAAGCTGAGGTGGCCATGCTCCGTGTCACAGGTATaGGCAGCCTGGATCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TKATWRLNLKTKKLRWPCSVSQV*AAWISG Trigger: CCCTGAGATCCAGGCTGCCCATACCTGTGACACGGA...GCATGGCCACCTCAGCTTCTTGGTTTTGAGATTGAGTCTCCAGGTGGCTTTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
||
| CDS-3UTR CCA 90 bp | GATTCAACAGGTGTGAAGCCCTGCCCTTTGGGGCAAAATGCACACACAGGCCACGTGTTGAGCACGCCATaGCAAAAGCCAACACACTGC | + |
|
Preference number: 4 (lower is better) Translates to: DSTGVKPCPLGQNAHTGHVLSTP*QKPTHC Trigger: GCAGTGTGTTGGCTTTTGCCATGGCGTGCTCAACAC...GTGGCCTGTGTGTGCATTTTGCCCCAAAGGGCAGGGCTTCACACCTGTTGAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR GCA 90 bp | TCAGACAGAGATGGGTCAGGTTTTGACTGGAGACCTCTGCCGTCATGGAGAGACGAAACATGGCTTCGCTaGACAGGAACTCACGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: SDRDGSGFDWRPLPSWRDETWLR*TGTHGC Trigger: GCATCCGTGAGTTCCTGTGCAGCGAAGCCATGTTTC...GTCTCTCCATGACGGCAGAGGTCTCCAGTCAAAACCTGACCCATCTCTGTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR CCA 90 bp | AACAGGTGTGAAGCCCTGCCCTTTGGGGCAAAATGCACACACAGGCCACAAGGCTTCCACTTGCATACCTaGGGCTGCTTACTGTATGTG | + |
|
Preference number: 4 (lower is better) Translates to: NRCEALPFGAKCTHRPQGFHLHT*GCLLYV Trigger: CACATACAGTAAGCAGCCCCAGGTATGCAAGTGGAA...GCCTTGTGGCCTGTGTGTGCATTTTGCCCCAAAGGGCAGGGCTTCACACCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR CCA 90 bp | GGCCCAGGAGATTCAACAGGTGTGAAGCCCTGCCCTTTGGGGCAAAATGCACACTGGTCTCCAGAAGTTTaGCCACAAGTGTCCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GPGDSTGVKPCPLGQNAHWSPEV*PQVSHL Trigger: AAGATGGGACACTTGTGGCCAAACTTCTGGAGACCA...GTGTGCATTTTGCCCCAAAGGGCAGGGCTTCACACCTGTTGAATCTCCTGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR TCA 90 bp | TTTAGAGGCCCAGGAGATTCAACAGGTGTGAAGCCCTGCCCTTTGGGGCAAAATTGTTCTAGCCGAGACTaGTGCTCCACACGTTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FRGPGDSTGVKPCPLGQNCSSRD*CSTRSS Trigger: GCTAGAACGTGTGGAGCATCAGTCTCGGCTAGAACA...ATTTTGCCCCAAAGGGCAGGGCTTCACACCTGTTGAATCTCCTGGGCCTCTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR GCA 90 bp | AATGAAATAAGCCAGTCACAAGTGAGTCCATGGAGTTTCTCTACTGAGTGGTCATCCCACGCTGGGGCCTaGACGCCCTGTGTGCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: NEISQSQVSPWSFSTEWSSHAGA*TPCVLI Trigger: GATGAGCACACAGGGCGTGCAGGCCCCAGCGTGGGA...TGACCACTCAGTAGAGAAACTCCATGGACTCACTTGTGACTGGCTTATTTCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
||
| CDS-3UTR GCA 90 bp | GCCGTCATGGAGAGACTGAGGACAGGCATCCCAGCGGTCTCAGCAACTCAGCAGTACGCAACACAACCGTaGACTTTTCATATTTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: AVMERLRTGIPAVSATQQYATQP*TFHILD Trigger: ATCCAAAATATGAAAAGTGCACGGTTGTGTTGCGTA...CTGCTGAGTTGCTGAGACCGCTGGGATGCCTGTCCTCAGTCTCTCCATGACGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR GCA 90 bp | TTTAGAGGCCCAGGAGATTCAACAGGTGTGAAGCCCTGCCCTTTGGGGCAAAATTCTGCAGATTCCACTTaGATACCTGGGGCTGCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: FRGPGDSTGVKPCPLGQNSADST*IPGAAY Trigger: GTAAGCAGCCCCAGGTATGCAAGTGGAATCTGCAGA...ATTTTGCCCCAAAGGGCAGGGCTTCACACCTGTTGAATCTCCTGGGCCTCTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR CCA 90 bp | TTTAGAGGCCCAGGAGATTCAACAGGTGTGAAGCCCTGCCCTTTGGGGCAAAATCACCAGTCAGATGCATaGTCTCCAGAAGTTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FRGPGDSTGVKPCPLGQNHQSDA*SPEVWP Trigger: TGGCCAAACTTCTGGAGACCATGCATCTGACTGGTG...ATTTTGCCCCAAAGGGCAGGGCTTCACACCTGTTGAATCTCCTGGGCCTCTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| 3UTR CAA 72 bp | TCGATAGTGAGCCCCACAATGCTCATGTTGTCAGTGTaGAGCACGCCATGGCAAAAGCCAACACACTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SIVSPTMLMLSV*STPWQKPTHCH Trigger: ATGGCAGTGTGTTGGCTTTTGCCATGGCGTGCTCAACACTGACAACATGAGCATTGTGGGGCTCACTATCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
||
| 3UTR CAA 72 bp | GTAAATGAGTTCTGTACCCCTGCAATGGAGAGCTGGTaGACAGATGGGAAATCCGTGACTCAGCCTCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: VNEFCTPAMESW*TDGKSVTQPHC Trigger: GCAGTGAGGCTGAGTCACGGATTTCCCATCTGTCAACCAGCTCTCCATTGCAGGGGTACAGAACTCATTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
||
| 3UTR CAA 72 bp | GTTTGGGAACTGGGGCTGCTTTCAGTGCCACTGAGTTaGGAGAACACTAAGTATTTTCCCACAGTGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VWELGLLSVPLS*ENTKYFPTVTG Trigger: CCCTGTCACTGTGGGAAAATACTTAGTGTTCTCCAAACTCAGTGGCACTGAAAGCAGCCCCAGTTCCCAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
||
| CDS-3UTR TCA 90 bp | TGCCCTTTGGGGCAAAATGCACACACAGGCCACAAGGCTTACTTACTTAGGCCTGTTCTAGCTCCTTTGTaGCATTGGCTTGAGTACCAA | + |
|
Preference number: 4 (lower is better) Translates to: CPLGQNAHTGHKAYLLRPVLAPL*HWLEYQ Trigger: TTGGTACTCAAGCCAATGTCACAAAGGAGCTAGAAC...AGGCCTAAGTAAGTAAGCCTTGTGGCCTGTGTGTGCATTTTGCCCCAAAGGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR GCA 90 bp | GTGAAGCCCTGCCCTTTGGGGCAAAATGCACACACAGGCCACAAGGCTTACTTATTCAATGGCTTTCTGTaGAATATAGTTCCTCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VKPCPLGQNAHTGHKAYLFNGFL*NIVPQD Trigger: GTCCTGAGGAACTATATTGCACAGAAAGCCATTGAA...TAAGTAAGCCTTGTGGCCTGTGTGTGCATTTTGCCCCAAAGGGCAGGGCTTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR CCA 90 bp | ATGCTAGGCCAGGGTAGTACTGCTAAGGTAGTATCAGACAGAGATGGGTCAGGTTTTCAGCAGCTTCAATaGCTTTCTGTGCAATATAGT | + |
|
Preference number: 4 (lower is better) Translates to: MLGQGSTAKVVSDRDGSGFQQLQ*LSVQYS Trigger: ACTATATTGCACAGAAAGCCATTGAAGCTGCTGAAA...ACCTGACCCATCTCTGTCTGATACTACCTTAGCAGTACTACCCTGGCCTAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR GCA 90 bp | ACAAGGCTTACTTACTTAGGCCTGTTTGCATTACTTAAAAACATGAGACTGATATACACAGAGTTCTGCTaGCCAGAGGGGTGGCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TRLTYLGLFALLKNMRLIYTEFC*PEGWPV Trigger: AACAGGCCACCCCTCTGGGCAGCAGAACTCTGTGTA...TATCAGTCTCATGTTTTTAAGTAATGCAAACAGGCCTAAGTAAGTAAGCCTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR GCA 90 bp | ACAAGGCTTACTTACTTAGGCCTGTTTGCATTACTTAAAAACATGAGACTGATATTGAGTACCAATGAGTaGAAAGAGCTGTGGGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: TRLTYLGLFALLKNMRLILSTNE*KELWVR Trigger: TCGAACCCACAGCTCTTTGCACTCATTGGTACTCAA...TATCAGTCTCATGTTTTTAAGTAATGCAAACAGGCCTAAGTAAGTAAGCCTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS GCA 90 bp | GTCAAAGCGCAGCCCTGCCAGCCAACGCGGCGTGGGCTCCATAGCTaGAGCCCAGGCGGACCGGGGCGCGGACGACGGAAGCGCGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: VKAQPCQPTRRGLHS*SPGGPGRGRRKRET Trigger: GGTCTCGCGCTTCCGTCGTCCGCGCCCCGGTCCGCCTGGGCTGCAGCTATGGAGCCCACGCCGCGTTGGCTGGCAGGGCTGCGCTTTGAC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082439.6 ENSMUST00000130700.8 |
||
| CDS TCA 90 bp | AGCAGTGCGCGGCGGGCTCGGTGCCCGGCAGCAGCGCATTGCCGCTaGAGAAGAGCGCAGCTTCGGCCTCGACCTCGGCCTCCTCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSARRARCPAAAHCR*RRAQLRPRPRPPRW Trigger: CCAGCGAGGAGGCCGAGGTCGAGGCCGAAGCTGCGCTCTTCTTCAGCGGCAATGCGCTGCTGCCGGGCACCGAGCCCGCCGCGCACTGCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082439.6 ENSMUST00000130700.8 |
||
| CDS GCA 90 bp | CTCCACCGGCAGCTCACGCAGGGCGCGGTTGTCAAAGCGCAGCCCTaGCAGCCAACGCGGCGTGGGCTCCATAGCTGCAGCCCAGGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: LHRQLTQGAVVKAQP*QPTRRGLHSCSPGG Trigger: TCCGCCTGGGCTGCAGCTATGGAGCCCACGCCGCGTTGGCTGGCAGGGCTGCGCTTTGACAACCGCGCCCTGCGTGAGCTGCCGGTGGAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082439.6 ENSMUST00000130700.8 |
||
| CDS CCA 90 bp | GCTCCCAGCGCTCGCCGGCCGCTGTGCACACCTCGCCCAGGTACATaGCGGCACCGTCGCCCAACTGCCCAGCGAACTGACCGAACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: APSARRPLCTPRPGT*RHRRPTAQRTDRTG Trigger: ACCAGTTCGGTCAGTTCGCTGGGCAGTTGGGCGACGGTGCCGCCATGTACCTGGGCGAGGTGTGCACAGCGGCCGGCGAGCGCTGGGAGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082439.6 ENSMUST00000130700.8 |
||
| CDS TCA 90 bp | TCAGACGTGACGCAGGCCCCGGCCCTCGTGGTGGGGATTCCCAGGTaGAACATGGCTTCGCTGCACAGGAACTCACGGATGCTTGACCGC | + |
|
Preference number: 5 (lower is better) Translates to: SDVTQAPALVVGIPR*NMASLHRNSRMLDR Trigger: GCGGTCAAGCATCCGTGAGTTCCTGTGCAGCGAAGCCATGTTTCACCTGGGAATCCCCACCACGAGGGCCGGGGCCTGCGTCACGTCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082439.6 ENSMUST00000130700.8 |
||
| CDS GCA 90 bp | CCCCGGCCCTCGTGGTGGGGATTCCCAGGTGAAACATGGCTTCGCTaGACAGGAACTCACGGATGCTTGACCGCAGGACTTTGCGACCAT | + |
|
Preference number: 5 (lower is better) Translates to: PRPSWWGFPGETWLR*TGTHGCLTAGLCDH Trigger: ATGGTCGCAAAGTCCTGCGGTCAAGCATCCGTGAGTTCCTGTGCAGCGAAGCCATGTTTCACCTGGGAATCCCCACCACGAGGGCCGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082439.6 ENSMUST00000130700.8 |
||
| CDS GCA 90 bp | AGGCGAGCCTTAGCTCTTCCAGAGAGGCACACTGGGAGGTCAGCCTaGTCAGGAACTCTGCTGAGTCCGACAGGTCAGCCGGAAAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RRALALPERHTGRSA*SGTLLSPTGQPERS Trigger: GCTCCTTTCCGGCTGACCTGTCGGACTCAGCAGAGTTCCTGAGCAGGCTGACCTCCCAGTGTGCCTCTCTGGAAGAGCTAAGGCTCGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR CAA 90 bp | TTTAGAGGCCCAGGAGATTCAACAGGTGTGAAGCCCTGCCCTTTGGGGCAAAATGTGGGGCCGGCGCCTTaGAGCTGCAGCTCCCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: FRGPGDSTGVKPCPLGQNVGPAP*SCSSQR Trigger: GCGCTGGGAGCTGCAGCTCAAAGGCGCCGGCCCCAC...ATTTTGCCCCAAAGGGCAGGGCTTCACACCTGTTGAATCTCCTGGGCCTCTAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS GCA 90 bp | CTGCCCAGAGGGGTGGCCTGTTACTGTAGGAAGATTGCTCCTCAGTaGTCCTTGCCACTGCTTCAGGGCCTGTGGCCTCCTCTTCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: LPRGVACYCRKIAPQ*SLPLLQGLWPPLHC Trigger: ACAGTGAAGAGGAGGCCACAGGCCCTGAAGCAGTGGCAAGGAGCACTGAGGAGCAATCTTCCTACAGTAACAGGCCACCCCTCTGGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR CAA 90 bp | CCAGGAGATTCAACAGGTGTGAAGCCCTGCCCTTTGGGGCAAAATGCACACACACCCGGCAGCAGCGCATaGCCGCTGAAGAAGAGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGDSTGVKPCPLGQNAHTPGSSA*PLKKSA Trigger: TGCGCTCTTCTTCAGCGGCAATGCGCTGCTGCCGGG...TGTGTGTGCATTTTGCCCCAAAGGGCAGGGCTTCACACCTGTTGAATCTCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS TCA 90 bp | TCCCAGGTGAAACATGGCTTCGCTGCACAGGAACTCACGGATGCTTaGCCGCAGGACTTTGCGACCATCGGCTTGTCTGGAGAAGGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: SQVKHGFAAQELTDA*PQDFATIGLSGEGR Trigger: ACGCCCTTCTCCAGACAAGCCGATGGTCGCAAAGTCCTGCGGTCAAGCATCCGTGAGTTCCTGTGCAGCGAAGCCATGTTTCACCTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082439.6 ENSMUST00000130700.8 |
||
| CDS GCA 90 bp | GAGGGGTGGCCTGTTACTGTAGGAAGATTGCTCCTCAGTGCTCCTTaGCACTGCTTCAGGGCCTGTGGCCTCCTCTTCACTGTGGTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: EGWPVTVGRLLLSAP*HCFRACGLLFTVVR Trigger: CCTTACCACAGTGAAGAGGAGGCCACAGGCCCTGAAGCAGTGGCAAGGAGCACTGAGGAGCAATCTTCCTACAGTAACAGGCCACCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR CAA 90 bp | ATGGTCTCCAGAAGTTTGGCCACAAGTGTCCCATCTTCTTCCTTCTCCACTCGATCACGCAGGGCGCGGTaGTCAAAGCGCAGCCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: MVSRSLATSVPSSSFSTRSRRAR*SKRSPA Trigger: GGCAGGGCTGCGCTTTGACAACCGCGCCCTGCGTGA...TCGAGTGGAGAAGGAAGAAGATGGGACACTTGTGGCCAAACTTCTGGAGACCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
||
| CDS-3UTR CAA 90 bp | TTGGGCAGCAGAGGCAGGTGGATCTTGAGTTTCAAGGCCAAACTGGTCTCTTCACCCGGCAGCAGCGCATaGCCGCTGAAGAAGAGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: LGSRGRWILSFKAKLVSSPGSSA*PLKKSA Trigger: TGCGCTCTTCTTCAGCGGCAATGCGCTGCTGCCGGG...TGAAGAGACCAGTTTGGCCTTGAAACTCAAGATCCACCTGCCTCTGCTGCCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130700.8 |
||
| CDS-3UTR CAA 90 bp | GTGAAGCCCTGCCCTTTGGGGCAAAATGCACACACAGGCCACAAGGCTTACTTAGCTCCTCAGTGCTCCTaGCCACTGCTTCAGGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VKPCPLGQNAHTGHKAYLAPQCS*PLLQGL Trigger: CAGGCCCTGAAGCAGTGGCAAGGAGCACTGAGGAGC...TAAGTAAGCCTTGTGGCCTGTGTGTGCATTTTGCCCCAAAGGGCAGGGCTTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS GCA 90 bp | GGATTCCCAGGTGAAACATGGCTTCGCTGCACAGGAACTCACGGATaGTTGACCGCAGGACTTTGCGACCATCGGCTTGTCTGGAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GFPGETWLRCTGTHG*LTAGLCDHRLVWRR Trigger: CCTTCTCCAGACAAGCCGATGGTCGCAAAGTCCTGCGGTCAAGCATCCGTGAGTTCCTGTGCAGCGAAGCCATGTTTCACCTGGGAATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082439.6 ENSMUST00000130700.8 |
||
| CDS CCA 90 bp | TCCTTGTCGAGACGGTCTCTGTATTCCTGTAGCCAGGCTTCCCAGTaGTCTCTGTTCTTGCGCTGCAGGTCAGAGGGGCTCAGCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLSRRSLYSCSQASQ*SLFLRCRSEGLSCS Trigger: AGAACAGCTGAGCCCCTCTGACCTGCAGCGCAAGAACAGAGACCACTGGGAAGCCTGGCTACAGGAATACAGAGACCGTCTCGACAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS GCA 90 bp | CACGCCATGGCAAAAGCCAACACACTGCCATTCAGCAACCATCCGTaGTGTTCGCTGTGTCACCTCTCTGAAAAAGGCCGCGTTCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HAMAKANTLPFSNHP*CSLCHLSEKGRVPL Trigger: CAGAGGAACGCGGCCTTTTTCAGAGAGGTGACACAGCGAACAGCACGGATGGTTGCTGAATGGCAGTGTGTTGGCTTTTGCCATGGCGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS GCA 90 bp | TGGCCTGTTACTGTAGGAAGATTGCTCCTCAGTGCTCCTTGCCACTaGTTCAGGGCCTGTGGCCTCCTCTTCACTGTGGTAAGGAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: WPVTVGRLLLSAPCH*FRACGLLFTVVRRL Trigger: GAGTCTCCTTACCACAGTGAAGAGGAGGCCACAGGCCCTGAAGCAGTGGCAAGGAGCACTGAGGAGCAATCTTCCTACAGTAACAGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS CCA 90 bp | AGGAAGATTGCTCCTCAGTGCTCCTTGCCACTGCTTCAGGGCCTGTaGCCTCCTCTTCACTGTGGTAAGGAGACTCTAGCAGCTTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RKIAPQCSLPLLQGL*PPLHCGKETLAASG Trigger: TCCTGAAGCTGCTAGAGTCTCCTTACCACAGTGAAGAGGAGGCCACAGGCCCTGAAGCAGTGGCAAGGAGCACTGAGGAGCAATCTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
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| CDS-3UTR CAA 90 bp | CGTCATGGAGAGACTGAGGACAGGCATCCCAGCGGTCTCAGCAACTCAGCAGCACTCATGTTGTCAGTGTaGAGCACGCCATGGCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RHGETEDRHPSGLSNSAALMLSV*STPWQK Trigger: CTTTTGCCATGGCGTGCTCAACACTGACAACATGAG...TGCTGCTGAGTTGCTGAGACCGCTGGGATGCCTGTCCTCAGTCTCTCCATGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR CAA 90 bp | AACAGGTGTGAAGCCCTGCCCTTTGGGGCAAAATGCACACACAGGCCACAAGGCACACCCTCCTTCTCCTaGTCGAGACGGTCTCTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: NRCEALPFGAKCTHRPQGTPSFS*SRRSLY Trigger: ATACAGAGACCGTCTCGACAAGGAGAAGGAGGGTGT...GCCTTGTGGCCTGTGTGTGCATTTTGCCCCAAAGGGCAGGGCTTCACACCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR CAA 90 bp | TCTGCCGTCATGGAGAGACTGAGGACAGGCATCCCAGCGGTCTCAGCAACTCAGGTTACTGTAGGAAGATaGCTCCTCAGTGCTCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SAVMERLRTGIPAVSATQVTVGR*LLSAPC Trigger: GCAAGGAGCACTGAGGAGCAATCTTCCTACAGTAAC...CTGAGTTGCTGAGACCGCTGGGATGCCTGTCCTCAGTCTCTCCATGACGGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS TCA 90 bp | GTGCAATATAGTTCCTCAGGACGTACTTGGGGTTGTTGGCACGCATaGCACGTACACGTTCTGCCTGCCAGGCAGCAGTGTCTCCAACAC | + |
|
Preference number: 5 (lower is better) Translates to: VQYSSSGRTWGCWHA*HVHVLPARQQCLQH Trigger: GTGTTGGAGACACTGCTGCCTGGCAGGCAGAACGTGTACGTGTCATGCGTGCCAACAACCCCAAGTACGTCCTGAGGAACTATATTGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR CAA 90 bp | GATTCAACAGGTGTGAAGCCCTGCCCTTTGGGGCAAAATGCACACACAGGCCACCCCACAATGCTCATGTaGTCAGTGTTGAGCACGCCA | + |
|
Preference number: 5 (lower is better) Translates to: DSTGVKPCPLGQNAHTGHPTMLM*SVLSTP Trigger: TGGCGTGCTCAACACTGACAACATGAGCATTGTGGG...GTGGCCTGTGTGTGCATTTTGCCCCAAAGGGCAGGGCTTCACACCTGTTGAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR CAA 90 bp | TCAGACAGAGATGGGTCAGGTTTTGACTGGAGACCTCTGCCGTCATGGAGAGACTTCCTCAGGACGTACTaGGGGTTGTTGGCACGCATG | + |
|
Preference number: 5 (lower is better) Translates to: SDRDGSGFDWRPLPSWRDFLRTY*GLLARM Trigger: CATGCGTGCCAACAACCCCAAGTACGTCCTGAGGAA...GTCTCTCCATGACGGCAGAGGTCTCCAGTCAAAACCTGACCCATCTCTGTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS GCA 90 bp | CTCATGTTGTCAGTGTTGAGCACGCCATGGCAAAAGCCAACACACTaGCATTCAGCAACCATCCGTGCTGTTCGCTGTGTCACCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LMLSVLSTPWQKPTH*HSATIRAVRCVTSL Trigger: CAGAGAGGTGACACAGCGAACAGCACGGATGGTTGCTGAATGGCAGTGTGTTGGCTTTTGCCATGGCGTGCTCAACACTGACAACATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS GCA 90 bp | GTCAAGCAATTGGACTCGGATATCATCTCGTCCCACGCTGGGGCCTaGACGCCCTGTGTGCTCATCAGGAGGCTTAAAAATTTCAAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VKQLDSDIISSHAGA*TPCVLIRRLKNFKG Trigger: TCCTTTGAAATTTTTAAGCCTCCTGATGAGCACACAGGGCGTGCAGGCCCCAGCGTGGGACGAGATGATATCCGAGTCCAATTGCTTGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000082439.6 ENSMUST00000130700.8 |
||
| CDS GCA 90 bp | GAGCTCAGAACACAGAAGGTGTTAGTGAAGTCAGCACCAGTCAGATaGATGGTCTCCAGAAGTTTGGCCACAAGTGTCCCATCTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ELRTQKVLVKSAPVR*MVSRSLATSVPSSS Trigger: GGAAGAAGATGGGACACTTGTGGCCAAACTTCTGGAGACCATGCATCTGACTGGTGCTGACTTCACTAACACCTTCTGTGTTCTGAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR CAA 90 bp | ATGCTAGGCCAGGGTAGTACTGCTAAGGTAGTATCAGACAGAGATGGGTCAGGTATGGTCTCCAGAAGTTaGGCCACAAGTGTCCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: MLGQGSTAKVVSDRDGSGMVSRS*ATSVPS Trigger: AGATGGGACACTTGTGGCCAAACTTCTGGAGACCAT...ACCTGACCCATCTCTGTCTGATACTACCTTAGCAGTACTACCCTGGCCTAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR CAA 90 bp | ACAAGGCTTACTTACTTAGGCCTGTTTGCATTACTTAAAAACATGAGACTGATATCACGCAGGGCGCGGTaGTCAAAGCGCAGCCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TRLTYLGLFALLKNMRLISRRAR*SKRSPA Trigger: GGCAGGGCTGCGCTTTGACAACCGCGCCCTGCGTGA...TATCAGTCTCATGTTTTTAAGTAATGCAAACAGGCCTAAGTAAGTAAGCCTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS-3UTR CAA 90 bp | CCAGGAGATTCAACAGGTGTGAAGCCCTGCCCTTTGGGGCAAAATGCACACACACTTTGTGACATTGGCTaGAGTACCAATGAGTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PGDSTGVKPCPLGQNAHTLCDIG*STNECK Trigger: TTTGCACTCATTGGTACTCAAGCCAATGTCACAAAG...TGTGTGTGCATTTTGCCCCAAAGGGCAGGGCTTCACACCTGTTGAATCTCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS CCA 90 bp | GAAAGTGGGAGCTATACGCAACACAACCGTGCACTTTTCATATTTTaGATTACCATCATAGAACACGTCTCGCATCACTGTAGACTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ESGSYTQHNRALFIF*ITIIEHVSHHCRLR Trigger: TCTGAGTCTACAGTGATGCGAGACGTGTTCTATGATGGTAATCCAAAATATGAAAAGTGCACGGTTGTGTTGCGTATAGCTCCCACTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
||
| CDS GCA 72 bp | CAGCCCTGCCAGCCAACGCGGCGTGGGCTCCATAGCTaGAGCCCAGGCGGACCGGGGCGCGGACGACGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: QPCQPTRRGLHS*SPGGPGRGRRK Trigger: CTTCCGTCGTCCGCGCCCCGGTCCGCCTGGGCTGCAGCTATGGAGCCCACGCCGCGTTGGCTGGCAGGGCTG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082439.6 ENSMUST00000130700.8 |
||
| CDS CAA 72 bp | GGCGGCGTCTCCACCGGCAGCTCACGCAGGGCGCGGTaGTCAAAGCGCAGCCCTGCCAGCCAACGCGGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: GGVSTGSSRRAR*SKRSPASQRGV Trigger: CACGCCGCGTTGGCTGGCAGGGCTGCGCTTTGACAACCGCGCCCTGCGTGAGCTGCCGGTGGAGACGCCGCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082439.6 ENSMUST00000130700.8 |
||
| CDS CAA 90 bp | GGCCCAGGCGGCGGCGTCTCCACCGGCAGCTCACGCAGGGCGCGGTaGTCAAAGCGCAGCCCTGCCAGCCAACGCGGCGTGGGCTCCATA | + |
|
Preference number: 6 (lower is better) Translates to: GPGGGVSTGSSRRAR*SKRSPASQRGVGSI Trigger: TATGGAGCCCACGCCGCGTTGGCTGGCAGGGCTGCGCTTTGACAACCGCGCCCTGCGTGAGCTGCCGGTGGAGACGCCGCCGCCTGGGCC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082439.6 ENSMUST00000130700.8 |
||
| CDS TCA 72 bp | CGGCGGGCTCGGTGCCCGGCAGCAGCGCATTGCCGCTaGAGAAGAGCGCAGCTTCGGCCTCGACCTCGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RRARCPAAAHCR*RRAQLRPRPRP Trigger: AGGCCGAGGTCGAGGCCGAAGCTGCGCTCTTCTTCAGCGGCAATGCGCTGCTGCCGGGCACCGAGCCCGCCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082439.6 ENSMUST00000130700.8 |
||
| CDS GCA 72 bp | TGTCTGGAGAAGGGCGTGGGGCCGGCGCCTTTGAGCTaGAGCTCCCAGCGCTCGCCGGCCGCTGTGCACACC | + |
|
Preference number: 6 (lower is better) Translates to: CLEKGVGPAPLS*SSQRSPAAVHT Trigger: GGTGTGCACAGCGGCCGGCGAGCGCTGGGAGCTGCAGCTCAAAGGCGCCGGCCCCACGCCCTTCTCCAGACA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082439.6 ENSMUST00000130700.8 |
||
| CDS CCA 72 bp | GCTCGCCGGCCGCTGTGCACACCTCGCCCAGGTACATaGCGGCACCGTCGCCCAACTGCCCAGCGAACTGAC | + |
|
Preference number: 6 (lower is better) Translates to: ARRPLCTPRPGT*RHRRPTAQRTD Trigger: GTCAGTTCGCTGGGCAGTTGGGCGACGGTGCCGCCATGTACCTGGGCGAGGTGTGCACAGCGGCCGGCGAGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082439.6 ENSMUST00000130700.8 |
||
| CDS CAA 90 bp | TTGCGACCATCGGCTTGTCTGGAGAAGGGCGTGGGGCCGGCGCCTTaGAGCTGCAGCTCCCAGCGCTCGCCGGCCGCTGTGCACACCTCG | + |
|
Preference number: 6 (lower is better) Translates to: LRPSACLEKGVGPAP*SCSSQRSPAAVHTS Trigger: CGAGGTGTGCACAGCGGCCGGCGAGCGCTGGGAGCTGCAGCTCAAAGGCGCCGGCCCCACGCCCTTCTCCAGACAAGCCGATGGTCGCAA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082439.6 ENSMUST00000130700.8 |
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| CDS GCA 72 bp | CAGCTCACGCAGGGCGCGGTTGTCAAAGCGCAGCCCTaGCAGCCAACGCGGCGTGGGCTCCATAGCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: QLTQGAVVKAQP*QPTRRGLHSCS Trigger: GCTGCAGCTATGGAGCCCACGCCGCGTTGGCTGGCAGGGCTGCGCTTTGACAACCGCGCCCTGCGTGAGCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082439.6 ENSMUST00000130700.8 |
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| CDS CCA 72 bp | CCCCGGCCCTCGTGGTGGGGATTCCCAGGTGAAACATaGCTTCGCTGCACAGGAACTCACGGATGCTTGACC | + |
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Preference number: 6 (lower is better) Translates to: PRPSWWGFPGET*LRCTGTHGCLT Trigger: GGTCAAGCATCCGTGAGTTCCTGTGCAGCGAAGCCATGTTTCACCTGGGAATCCCCACCACGAGGGCCGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082439.6 ENSMUST00000130700.8 |
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| CDS TCA 72 bp | GGCACACTGGGAGGTCAGCCTGCTCAGGAACTCTGCTaGGTCCGACAGGTCAGCCGGAAAGGAGCTCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: GTLGGQPAQELC*VRQVSRKGAQN Trigger: GTTCTGAGCTCCTTTCCGGCTGACCTGTCGGACTCAGCAGAGTTCCTGAGCAGGCTGACCTCCCAGTGTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
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| CDS GCA 72 bp | TGCACAGGAACTCACGGATGCTTGACCGCAGGACTTTaGGACCATCGGCTTGTCTGGAGAAGGGCGTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: CTGTHGCLTAGL*DHRLVWRRAWG Trigger: GCCCCACGCCCTTCTCCAGACAAGCCGATGGTCGCAAAGTCCTGCGGTCAAGCATCCGTGAGTTCCTGTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082439.6 ENSMUST00000130700.8 |
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| CDS CAA 72 bp | CTGCACAGGAACTCACGGATGCTTGACCGCAGGACTTaGCGACCATCGGCTTGTCTGGAGAAGGGCGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: LHRNSRMLDRRT*RPSACLEKGVG Trigger: CCCCACGCCCTTCTCCAGACAAGCCGATGGTCGCAAAGTCCTGCGGTCAAGCATCCGTGAGTTCCTGTGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082439.6 ENSMUST00000130700.8 |
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| CDS GCA 72 bp | GGGGTGGCCTGTTACTGTAGGAAGATTGCTCCTCAGTaGTCCTTGCCACTGCTTCAGGGCCTGTGGCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: GVACYCRKIAPQ*SLPLLQGLWPP Trigger: AGGAGGCCACAGGCCCTGAAGCAGTGGCAAGGAGCACTGAGGAGCAATCTTCCTACAGTAACAGGCCACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
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| CDS CCA 72 bp | CAAGCAATTGGACTCGGATATCATCTCGTCCCACGCTaGGGCCTGCACGCCCTGTGTGCTCATCAGGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: QAIGLGYHLVPR*GLHALCAHQEA Trigger: AGCCTCCTGATGAGCACACAGGGCGTGCAGGCCCCAGCGTGGGACGAGATGATATCCGAGTCCAATTGCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082439.6 ENSMUST00000130700.8 |
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| CDS CCA 72 bp | CTGAAGGCGAGCCTTAGCTCTTCCAGAGAGGCACACTaGGAGGTCAGCCTGCTCAGGAACTCTGCTGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: LKASLSSSREAH*EVSLLRNSAES Trigger: GGACTCAGCAGAGTTCCTGAGCAGGCTGACCTCCCAGTGTGCCTCTCTGGAAGAGCTAAGGCTCGCCTTCAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
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| CDS CAA 72 bp | TGCTGCCCAGAGGGGTGGCCTGTTACTGTAGGAAGATaGCTCCTCAGTGCTCCTTGCCACTGCTTCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: CCPEGWPVTVGR*LLSAPCHCFRA Trigger: GGCCCTGAAGCAGTGGCAAGGAGCACTGAGGAGCAATCTTCCTACAGTAACAGGCCACCCCTCTGGGCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
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| CDS CAA 90 bp | ACAGAGTTCTGCTGCCCAGAGGGGTGGCCTGTTACTGTAGGAAGATaGCTCCTCAGTGCTCCTTGCCACTGCTTCAGGGCCTGTGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: TEFCCPEGWPVTVGR*LLSAPCHCFRACGL Trigger: GAGGCCACAGGCCCTGAAGCAGTGGCAAGGAGCACTGAGGAGCAATCTTCCTACAGTAACAGGCCACCCCTCTGGGCAGCAGAACTCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
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| CDS CAA 90 bp | TTCCCAGGTGAAACATGGCTTCGCTGCACAGGAACTCACGGATGCTaGACCGCAGGACTTTGCGACCATCGGCTTGTCTGGAGAAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: FPGETWLRCTGTHGC*TAGLCDHRLVWRRA Trigger: CGCCCTTCTCCAGACAAGCCGATGGTCGCAAAGTCCTGCGGTCAAGCATCCGTGAGTTCCTGTGCAGCGAAGCCATGTTTCACCTGGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082439.6 ENSMUST00000130700.8 |
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| CDS CAA 90 bp | AGAGGGGTGGCCTGTTACTGTAGGAAGATTGCTCCTCAGTGCTCCTaGCCACTGCTTCAGGGCCTGTGGCCTCCTCTTCACTGTGGTAAG | + |
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Preference number: 6 (lower is better) Translates to: RGVACYCRKIAPQCS*PLLQGLWPPLHCGK Trigger: CTTACCACAGTGAAGAGGAGGCCACAGGCCCTGAAGCAGTGGCAAGGAGCACTGAGGAGCAATCTTCCTACAGTAACAGGCCACCCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
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| CDS TCA 72 bp | AGTTCCTCAGGACGTACTTGGGGTTGTTGGCACGCATaGCACGTACACGTTCTGCCTGCCAGGCAGCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: SSSGRTWGCWHA*HVHVLPARQQC Trigger: ACACTGCTGCCTGGCAGGCAGAACGTGTACGTGTCATGCGTGCCAACAACCCCAAGTACGTCCTGAGGAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
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| CDS GCA 72 bp | GGTGAAACATGGCTTCGCTGCACAGGAACTCACGGATaGTTGACCGCAGGACTTTGCGACCATCGGCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: GETWLRCTGTHG*LTAGLCDHRLV Trigger: GACAAGCCGATGGTCGCAAAGTCCTGCGGTCAAGCATCCGTGAGTTCCTGTGCAGCGAAGCCATGTTTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082439.6 ENSMUST00000130700.8 |
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| CDS GCA 72 bp | TCGTGGTGGGGATTCCCAGGTGAAACATGGCTTCGCTaGACAGGAACTCACGGATGCTTGACCGCAGGACTT | + |
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Preference number: 6 (lower is better) Translates to: SWWGFPGETWLR*TGTHGCLTAGL Trigger: AAGTCCTGCGGTCAAGCATCCGTGAGTTCCTGTGCAGCGAAGCCATGTTTCACCTGGGAATCCCCACCACGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082439.6 ENSMUST00000130700.8 |
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| CDS CAA 72 bp | GAAACATGGCTTCGCTGCACAGGAACTCACGGATGCTaGACCGCAGGACTTTGCGACCATCGGCTTGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: ETWLRCTGTHGC*TAGLCDHRLVW Trigger: CCAGACAAGCCGATGGTCGCAAAGTCCTGCGGTCAAGCATCCGTGAGTTCCTGTGCAGCGAAGCCATGTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082439.6 ENSMUST00000130700.8 |
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| CDS CAA 72 bp | TGCCAGGCAGCAGTGTCTCCAACACCCTCCTTCTCCTaGTCGAGACGGTCTCTGTATTCCTGTAGCCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: CQAAVSPTPSFS*SRRSLYSCSQA Trigger: AGCCTGGCTACAGGAATACAGAGACCGTCTCGACAAGGAGAAGGAGGGTGTTGGAGACACTGCTGCCTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
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| CDS CAA 72 bp | GCCTGTTACTGTAGGAAGATTGCTCCTCAGTGCTCCTaGCCACTGCTTCAGGGCCTGTGGCCTCCTCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: ACYCRKIAPQCS*PLLQGLWPPLH Trigger: GTGAAGAGGAGGCCACAGGCCCTGAAGCAGTGGCAAGGAGCACTGAGGAGCAATCTTCCTACAGTAACAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
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| CDS CAA 90 bp | AGCCTGGATCTCAGGGTAGAAAGAGCTGATGACATAGTCAAGCAATaGGACTCGGATATCATCTCGTCCCACGCTGGGGCCTGCACGCCC | + |
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Preference number: 6 (lower is better) Translates to: SLDLRVERADDIVKQ*DSDIISSHAGACTP Trigger: GGGCGTGCAGGCCCCAGCGTGGGACGAGATGATATCCGAGTCCAATTGCTTGACTATGTCATCAGCTCTTTCTACCCTGAGATCCAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082439.6 ENSMUST00000130700.8 |
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| CDS TCA 72 bp | AAACATGGCTTCGCTGCACAGGAACTCACGGATGCTTaGCCGCAGGACTTTGCGACCATCGGCTTGTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: KHGFAAQELTDA*PQDFATIGLSG Trigger: TCCAGACAAGCCGATGGTCGCAAAGTCCTGCGGTCAAGCATCCGTGAGTTCCTGTGCAGCGAAGCCATGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082439.6 ENSMUST00000130700.8 |
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| CDS GCA 72 bp | TTGGACTCGGATATCATCTCGTCCCACGCTGGGGCCTaGACGCCCTGTGTGCTCATCAGGAGGCTTAAAAAT | + |
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Preference number: 6 (lower is better) Translates to: LDSDIISSHAGA*TPCVLIRRLKN Trigger: ATTTTTAAGCCTCCTGATGAGCACACAGGGCGTGCAGGCCCCAGCGTGGGACGAGATGATATCCGAGTCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000082439.6 ENSMUST00000130700.8 |
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| CDS GCA 72 bp | ACTGTAGGAAGATTGCTCCTCAGTGCTCCTTGCCACTaGTTCAGGGCCTGTGGCCTCCTCTTCACTGTGGTA | + |
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Preference number: 6 (lower is better) Translates to: TVGRLLLSAPCH*FRACGLLFTVV Trigger: TACCACAGTGAAGAGGAGGCCACAGGCCCTGAAGCAGTGGCAAGGAGCACTGAGGAGCAATCTTCCTACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
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| CDS GCA 72 bp | CCTGTTACTGTAGGAAGATTGCTCCTCAGTGCTCCTTaGCACTGCTTCAGGGCCTGTGGCCTCCTCTTCACT | + |
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Preference number: 6 (lower is better) Translates to: PVTVGRLLLSAP*HCFRACGLLFT Trigger: AGTGAAGAGGAGGCCACAGGCCCTGAAGCAGTGGCAAGGAGCACTGAGGAGCAATCTTCCTACAGTAACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
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| CDS TCA 72 bp | TGCAGGTCAGAGGGGCTCAGCTGTTCTAGCCGAGACTaGTGCTCCACACGTTCTAGCTCCTTTGTGACATTG | + |
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Preference number: 6 (lower is better) Translates to: CRSEGLSCSSRD*CSTRSSSFVTL Trigger: CAATGTCACAAAGGAGCTAGAACGTGTGGAGCATCAGTCTCGGCTAGAACAGCTGAGCCCCTCTGACCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
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| CDS GCA 72 bp | GCAAAAGCCAACACACTGCCATTCAGCAACCATCCGTaGTGTTCGCTGTGTCACCTCTCTGAAAAAGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: AKANTLPFSNHP*CSLCHLSEKGR Trigger: GCGGCCTTTTTCAGAGAGGTGACACAGCGAACAGCACGGATGGTTGCTGAATGGCAGTGTGTTGGCTTTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
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| CDS GCA 72 bp | TCAGTGTTGAGCACGCCATGGCAAAAGCCAACACACTaGCATTCAGCAACCATCCGTGCTGTTCGCTGTGTC | + |
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Preference number: 6 (lower is better) Translates to: SVLSTPWQKPTH*HSATIRAVRCV Trigger: GACACAGCGAACAGCACGGATGGTTGCTGAATGGCAGTGTGTTGGCTTTTGCCATGGCGTGCTCAACACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
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| CDS CAA 72 bp | GTCACCTCTCTGAAAAAGGCCGCGTTCCTCTGTATGTaGTCCGTGTCACAGGTATGGGCAGCCTGGATCTCA | + |
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Preference number: 6 (lower is better) Translates to: VTSLKKAAFLCM*SVSQVWAAWIS Trigger: TGAGATCCAGGCTGCCCATACCTGTGACACGGACAACATACAGAGGAACGCGGCCTTTTTCAGAGAGGTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
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| CDS GCA 72 bp | AGTACCAATGAGTGCAAAGAGCTGTGGGTTCGACTGTaGAAGCATCAGCATCATAGAGAGCTGCCGGGGATC | + |
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Preference number: 6 (lower is better) Translates to: STNECKELWVRL*KHQHHRELPGI Trigger: GATCCCCGGCAGCTCTCTATGATGCTGATGCTTGCACAGTCGAACCCACAGCTCTTTGCACTCATTGGTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
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| CDS CAA 72 bp | CTCAGGGTAGAAAGAGCTGATGACATAGTCAAGCAATaGGACTCGGATATCATCTCGTCCCACGCTGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: LRVERADDIVKQ*DSDIISSHAGA Trigger: GGCCCCAGCGTGGGACGAGATGATATCCGAGTCCAATTGCTTGACTATGTCATCAGCTCTTTCTACCCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082439.6 ENSMUST00000130700.8 |
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| CDS GCA 72 bp | ACACAGAAGGTGTTAGTGAAGTCAGCACCAGTCAGATaGATGGTCTCCAGAAGTTTGGCCACAAGTGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: TQKVLVKSAPVR*MVSRSLATSVP Trigger: TGGGACACTTGTGGCCAAACTTCTGGAGACCATGCATCTGACTGGTGCTGACTTCACTAACACCTTCTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
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| CDS CAA 90 bp | GTGTTAGTGAAGTCAGCACCAGTCAGATGCATGGTCTCCAGAAGTTaGGCCACAAGTGTCCCATCTTCTTCCTTCTCCACTCGAATAAGG | + |
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Preference number: 6 (lower is better) Translates to: VLVKSAPVRCMVSRS*ATSVPSSSFSTRIR Trigger: CCTTATTCGAGTGGAGAAGGAAGAAGATGGGACACTTGTGGCCAAACTTCTGGAGACCATGCATCTGACTGGTGCTGACTTCACTAACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
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| CDS GCA 72 bp | AAAGTCTCCATTTTCAGCAGCTTCAATGGCTTTCTGTaGAATATAGTTCCTCAGGACGTACTTGGGGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: KVSIFSSFNGFL*NIVPQDVLGVV Trigger: AACAACCCCAAGTACGTCCTGAGGAACTATATTGCACAGAAAGCCATTGAAGCTGCTGAAAATGGAGACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
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| CDS CAA 72 bp | GAGCTATACGCAACACAACCGTGCACTTTTCATATTTaGGATTACCATCATAGAACACGTCTCGCATCACTG | + |
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Preference number: 6 (lower is better) Translates to: ELYATQPCTFHI*DYHHRTRLASL Trigger: CAGTGATGCGAGACGTGTTCTATGATGGTAATCCAAAATATGAAAAGTGCACGGTTGTGTTGCGTATAGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
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| CDS CCA 72 bp | AGCTATACGCAACACAACCGTGCACTTTTCATATTTTaGATTACCATCATAGAACACGTCTCGCATCACTGT | + |
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Preference number: 6 (lower is better) Translates to: SYTQHNRALFIF*ITIIEHVSHHC Trigger: ACAGTGATGCGAGACGTGTTCTATGATGGTAATCCAAAATATGAAAAGTGCACGGTTGTGTTGCGTATAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082439.6 |
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