Pregenerated sensors for SELENON (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050989Ensembl transcript IDs: ENSMUST00000060435.8
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGCCAGATGGGCTGCTAGTGGTAGCCGGATTAAGCTCAGTCACATaGCCGGGCAGACAGGCCCCCTCATCTGGCCACCATCCCTCAGGA | + |
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Preference number: 1 (lower is better) Translates to: EPDGLLVVAGLSSVT*PGRQAPSSGHHPSG Trigger: TCCTGAGGGATGGTGGCCAGATGAGGGGGCCTGTCTGCCCGGTCATGTGACTGAGCTTAATCCGGCTACCACTAGCAGCCCATCTGGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR TCA 90 bp | GGCGCTTCTTGGGAGTGTGGAGCACAGGACAGGGCTGGGGAATACTaGGTCTTGACTGCTTGTAAAAAGCTGGAGAGAAGGAAGGTGGGC | + |
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Preference number: 1 (lower is better) Translates to: GASWECGAQDRAGEY*VLTACKKLERRKVG Trigger: GCCCACCTTCCTTCTCTCCAGCTTTTTACAAGCAGTCAAGACTCAGTATTCCCCAGCCCTGTCCTGTGCTCCACACTCCCAAGAAGCGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR TCA 90 bp | TGGCTCACAGTGACCTGGCTGATGTCAAGAAGGCTCAGATGCGATTaGGTTCAAGGCGCTTCTTGGGAGTGTGGAGCACAGGACAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: WLTVTWLMSRRLRCD*VQGASWECGAQDRA Trigger: AGCCCTGTCCTGTGCTCCACACTCCCAAGAAGCGCCTTGAACTCAATCGCATCTGAGCCTTCTTGACATCAGCCAGGTCACTGTGAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCCCAAGGGCTGGCAGGGGAGTAGGAATCAGGGAATGTCTATGTGCCTTCCTGCTCTTGGAGCCAGATaGGCTGCTAGTGGTAGCCGG | + |
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Preference number: 2 (lower is better) Translates to: GPKGWQGSRNQGMSMCLPALGAR*AASGSR Trigger: CCGGCTACCACTAGCAGCCCATCTGGCTCCAAGAGC...AGGAAGGCACATAGACATTCCCTGATTCCTACTCCCCTGCCAGCCCTTGGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR-3UTR GCA 90 bp | GGCCCCAAGGGCTGGCAGGGGAGTAGGAATCAGGGAATGTCTATGTGCCTTCCTCCCCACATGTGCAACTaGGAGGACATCAGGCTGGAT | + |
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Preference number: 2 (lower is better) Translates to: GPKGWQGSRNQGMSMCLPPHMCN*EDIRLD Trigger: ATCCAGCCTGATGTCCTCGCAGTTGCACATGTGGGG...AGGAAGGCACATAGACATTCCCTGATTCCTACTCCCCTGCCAGCCCTTGGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR CAA 90 bp | ATGGCTCACAGTGACCTGGCTGATGTCAAGAAGGCTCAGATGCGATaGAGTTCAAGGCGCTTCTTGGGAGTGTGGAGCACAGGACAGGGC | + |
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Preference number: 2 (lower is better) Translates to: MAHSDLADVKKAQMR*SSRRFLGVWSTGQG Trigger: GCCCTGTCCTGTGCTCCACACTCCCAAGAAGCGCCTTGAACTCAATCGCATCTGAGCCTTCTTGACATCAGCCAGGTCACTGTGAGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCGATTGAGTTCAAGGCGCTTCTTGGGAGTGTGGAGCACAGGACAGGGCTGGGACAATGACCCTAGCTaGGAGCACTGTGCACAGAAG | + |
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Preference number: 2 (lower is better) Translates to: MRLSSRRFLGVWSTGQGWDNDPS*EHCAQK Trigger: CTTCTGTGCACAGTGCTCCCAGCTAGGGTCATTGTC...CCAGCCCTGTCCTGTGCTCCACACTCCCAAGAAGCGCCTTGAACTCAATCGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCAAGCTGTTCACCAAGTCCCCAAAAGTAGCCGATGGGAACTGGTGGCCATCGCTGCGCTCTTTGGCTaGGACACACTTCACAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: VQAVHQVPKSSRWELVAIAALFG*DTLHSE Trigger: TTCACTGTGAAGTGTGTCCCAGCCAAAGAGCGCAGC...GATGGCCACCAGTTCCCATCGGCTACTTTTGGGGACTTGGTGAACAGCTTGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR-3UTR TCA 90 bp | GTTCAAGCTGTTCACCAAGTCCCCAAAAGTAGCCGATGGGAACTGGTGGCCATCACTTCTCCATCTCTCTaGACAGGACTGGACTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: VQAVHQVPKSSRWELVAITSPSL*TGLDLG Trigger: ACCCAAGTCCAGTCCTGTTCAGAGAGATGGAGAAGT...GATGGCCACCAGTTCCCATCGGCTACTTTTGGGGACTTGGTGAACAGCTTGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGGACTGGACTTGGGTCATCAGGTCAACAGGCTGAAGGGTAGCAGTGTGACAGTGGATTCTGTCTGCTaGCTTTTTACCAGGTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: TGLDLGHQVNRLKGSSVTVDSVC*LFTRSR Trigger: CCTGGACCTGGTAAAAAGCCAGCAGACAGAATCCAC...TGTCACACTGCTACCCTTCAGCCTGTTGACCTGATGACCCAAGTCCAGTCCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCCTAAGACTCCAATGTCTTCCTCTGAAAAATGGGGGCAACTTTCCAATTCAACAGGCCCCCTCATCTaGCCACCATCCCTCAGGATT | + |
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Preference number: 2 (lower is better) Translates to: FPKTPMSSSEKWGQLSNSTGPLI*PPSLRI Trigger: AATCCTGAGGGATGGTGGCCAGATGAGGGGGCCTGT...TGAATTGGAAAGTTGCCCCCATTTTTCAGAGGAAGACATTGGAGTCTTAGGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR-3UTR CCA 90 bp | ACACCTGCTCTGTTTAGTCTGATAAGAAGACATGATTTGAAAACATTCCCTTCCCGCTTCTTGGGAGTGTaGAGCACAGGACAGGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: TPALFSLIRRHDLKTFPSRFLGV*STGQGW Trigger: CCAGCCCTGTCCTGTGCTCCACACTCCCAAGAAGCG...GGAAGGGAATGTTTTCAAATCATGTCTTCTTATCAGACTAAACAGAGCAGGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR-3UTR CCA 90 bp | GCAACTTTCCAATTCATGGTTTGCTATGAGAAAATGTATGTGATCTTCACAGGGCAGAGACAAGGCTCCTaGGAGCCAGAGAGCGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: ATFQFMVCYEKMYVIFTGQRQGS*EPESVR Trigger: CCTCACGCTCTCTGGCTCCCAGGAGCCTTGTCTCTG...CCCTGTGAAGATCACATACATTTTCTCATAGCAAACCATGAATTGGAAAGTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR-3UTR TCA 90 bp | ACACCTGCTCTGTTTAGTCTGATAAGAAGACATGATTTGAAAACATTCCCTTCCAGTGACAGCCTCAGATaGCCCTGGACCTCTCTAGGC | + |
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Preference number: 2 (lower is better) Translates to: TPALFSLIRRHDLKTFPSSDSLR*PWTSLG Trigger: GCCTAGAGAGGTCCAGGGTCATCTGAGGCTGTCACT...GGAAGGGAATGTTTTCAAATCATGTCTTCTTATCAGACTAAACAGAGCAGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGCAACTTTCCAATTCATGGTTTGCTATGAGAAAATGTATGTGATCTTCACATGGCTCCAAGGCGCGTaGATTCTGTCTGCTGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: GATFQFMVCYEKMYVIFTWLQGA*ILSAGF Trigger: AAAGCCAGCAGACAGAATCCACGCGCCTTGGAGCCA...TGTGAAGATCACATACATTTTCTCATAGCAAACCATGAATTGGAAAGTTGCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCCTAAGACTCCAATGTCTTCCTCTGAAAAATGGGGGCAACTTTCCAATTCAGAACAGGACTGGACTTaGGTCATCAGGTCAACAGGC | + |
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Preference number: 2 (lower is better) Translates to: FPKTPMSSSEKWGQLSNSEQDWT*VIRSTG Trigger: GCCTGTTGACCTGATGACCCAAGTCCAGTCCTGTTC...TGAATTGGAAAGTTGCCCCCATTTTTCAGAGGAAGACATTGGAGTCTTAGGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR-3UTR CCA 90 bp | ACACCTGCTCTGTTTAGTCTGATAAGAAGACATGATTTGAAAACATTCCCTTCCGTTCAAGGCGCTTCTTaGGAGTGTGGAGCACAGGAC | + |
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Preference number: 2 (lower is better) Translates to: TPALFSLIRRHDLKTFPSVQGAS*ECGAQD Trigger: GTCCTGTGCTCCACACTCCCAAGAAGCGCCTTGAAC...GGAAGGGAATGTTTTCAAATCATGTCTTCTTATCAGACTAAACAGAGCAGGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR-3UTR GCA 90 bp | TTTACTTTCCTAAGACTCCAATGTCTTCCTCTGAAAAATGGGGGCAACTTTCCACAGGCTGGATCCATTTaGGATTTCAGACCCAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: FTFLRLQCLPLKNGGNFPQAGSI*DFRPSH Trigger: ATGGCTGGGTCTGAAATCGCAAATGGATCCAGCCTG...TGGAAAGTTGCCCCCATTTTTCAGAGGAAGACATTGGAGTCTTAGGAAAGTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR TCA 72 bp | GGGCTGCTAGTGGTAGCCGGATTAAGCTCAGTCACATaGCCGGGCAGACAGGCCCCCTCATCTGGCCACCAT | + |
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Preference number: 3 (lower is better) Translates to: GLLVVAGLSSVT*PGRQAPSSGHH Trigger: ATGGTGGCCAGATGAGGGGGCCTGTCTGCCCGGTCATGTGACTGAGCTTAATCCGGCTACCACTAGCAGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR-3UTR CAA 90 bp | CTGGTGAGACCAGGTAAAGAGATGGCTCACAGTGACCTGGCTGATGTCAAGAAGCATAGCGCTGGCAGCTaGGCCCCGAGCCCAGCTCTT | + |
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Preference number: 3 (lower is better) Translates to: LVRPGKEMAHSDLADVKKHSAGS*APSPAL Trigger: AAGAGCTGGGCTCGGGGCCAAGCTGCCAGCGCTATG...CTTCTTGACATCAGCCAGGTCACTGTGAGCCATCTCTTTACCTGGTCTCACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR TCA 72 bp | ACCTTTCCAGTCCACTCCCTATTCACACCGAGGTCCTaGACTACACTGTGTGGTCCAGGGAGGTCTCCCCAG | + |
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Preference number: 3 (lower is better) Translates to: TFPVHSLFTPRS*TTLCGPGRSPQ Trigger: CTGGGGAGACCTCCCTGGACCACACAGTGTAGTTCAGGACCTCGGTGTGAATAGGGAGTGGACTGGAAAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR CCA 72 bp | CTCAGTCACATGACCGGGCAGACAGGCCCCCTCATCTaGCCACCATCCCTCAGGATTTATGAAAGTGACAGC | + |
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Preference number: 3 (lower is better) Translates to: LSHMTGQTGPLI*PPSLRIYESDS Trigger: GCTGTCACTTTCATAAATCCTGAGGGATGGTGGCCAGATGAGGGGGCCTGTCTGCCCGGTCATGTGACTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR-3UTR CAA 90 bp | ATGCGATTGAGTTCAAGGCGCTTCTTGGGAGTGTGGAGCACAGGACAGGGCTGGTCAGGCTGGATCCATTaGCGATTTCAGACCCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: MRLSSRRFLGVWSTGQGWSGWIH*RFQTQP Trigger: TGGCTGGGTCTGAAATCGCAAATGGATCCAGCCTGA...CCAGCCCTGTCCTGTGCTCCACACTCCCAAGAAGCGCCTTGAACTCAATCGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR TCA 72 bp | CCATCCCTCAGGATTTATGAAAGTGACAGCCTCAGATaGCCCTGGACCTCTCTAGGCAGCCTGGGGATGAGG | + |
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Preference number: 3 (lower is better) Translates to: PSLRIYESDSLR*PWTSLGSLGMR Trigger: CCTCATCCCCAGGCTGCCTAGAGAGGTCCAGGGTCATCTGAGGCTGTCACTTTCATAAATCCTGAGGGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR TCA 72 bp | GTGACCTGGCTGATGTCAAGAAGGCTCAGATGCGATTaGGTTCAAGGCGCTTCTTGGGAGTGTGGAGCACAG | + |
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Preference number: 3 (lower is better) Translates to: VTWLMSRRLRCD*VQGASWECGAQ Trigger: CTGTGCTCCACACTCCCAAGAAGCGCCTTGAACTCAATCGCATCTGAGCCTTCTTGACATCAGCCAGGTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR GCA 72 bp | CATGTGCAACTGCGAGGACATCAGGCTGGATCCATTTaGGATTTCAGACCCAGCCATCATGCGGCTGTTGCT | + |
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Preference number: 3 (lower is better) Translates to: HVQLRGHQAGSI*DFRPSHHAAVA Trigger: AGCAACAGCCGCATGATGGCTGGGTCTGAAATCGCAAATGGATCCAGCCTGATGTCCTCGCAGTTGCACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR GCA 72 bp | GAGAGAAGGAAGGTGGGCTTAGTTTCTCCCCACATGTaGAACTGCGAGGACATCAGGCTGGATCCATTTGCG | + |
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Preference number: 3 (lower is better) Translates to: ERRKVGLVSPHM*NCEDIRLDPFA Trigger: CGCAAATGGATCCAGCCTGATGTCCTCGCAGTTGCACATGTGGGGAGAAACTAAGCCCACCTTCCTTCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR TCA 72 bp | TGGGAGTGTGGAGCACAGGACAGGGCTGGGGAATACTaGGTCTTGACTGCTTGTAAAAAGCTGGAGAGAAGG | + |
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Preference number: 3 (lower is better) Translates to: WECGAQDRAGEY*VLTACKKLERR Trigger: CCTTCTCTCCAGCTTTTTACAAGCAGTCAAGACTCAGTATTCCCCAGCCCTGTCCTGTGCTCCACACTCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR CCA 72 bp | TTTCTCCCCACATGTGCAACTGCGAGGACATCAGGCTaGATCCATTTGCGATTTCAGACCCAGCCATCATGC | + |
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Preference number: 3 (lower is better) Translates to: FLPTCATARTSG*IHLRFQTQPSC Trigger: GCATGATGGCTGGGTCTGAAATCGCAAATGGATCCAGCCTGATGTCCTCGCAGTTGCACATGTGGGGAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR CCA 72 bp | GAATCAGGGAATGTCTATGTGCCTTCCTCCTCTGCATaGTTGAAGCTTGAGCCCCTGGTGAGACCAGGTAAA | + |
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Preference number: 3 (lower is better) Translates to: ESGNVYVPSSSA*LKLEPLVRPGK Trigger: TTTACCTGGTCTCACCAGGGGCTCAAGCTTCAACCATGCAGAGGAGGAAGGCACATAGACATTCCCTGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR CCA 72 bp | ACAGTGCTGGCAATAAGAAAGGCTGCGCTCTTTGGCTaGGACACACTTCACAGTGAACTTCTCCATCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: TVLAIRKAALFG*DTLHSELLHLS Trigger: AGAGAGATGGAGAAGTTCACTGTGAAGTGTGTCCCAGCCAAAGAGCGCAGCCTTTCTTATTGCCAGCACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR-3UTR CAA 90 bp | ACAGGACTGGACTTGGGTCATCAGGTCAACAGGCTGAAGGGTAGCAGTGTGACATTTAATTCCTTTGGCTaGAAAGGGGAGCCTAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: TGLDLGHQVNRLKGSSVTFNSFG*KGEPRK Trigger: CTTTCTAGGCTCCCCTTTCAAGCCAAAGGAATTAAA...TGTCACACTGCTACCCTTCAGCCTGTTGACCTGATGACCCAAGTCCAGTCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR TCA 72 bp | TCATGTGGGTTTGGATCACAACTCTGGTCCTCTGAGTaGCCCCGGAAGTCACTTTACTTTCCTAAGACTCCA | + |
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Preference number: 3 (lower is better) Translates to: SCGFGSQLWSSE*PRKSLYFPKTP Trigger: TGGAGTCTTAGGAAAGTAAAGTGACTTCCGGGGTCACTCAGAGGACCAGAGTTGTGATCCAAACCCACATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR-3UTR CAA 90 bp | TTTCCTAAGACTCCAATGTCTTCCTCTGAAAAATGGGGGCAACTTTCCAATTCAGACTCGAAGAAGCTCTaGGAGCCAGATGGGCTGCTA | + |
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Preference number: 3 (lower is better) Translates to: FPKTPMSSSEKWGQLSNSDSKKL*EPDGLL Trigger: TAGCAGCCCATCTGGCTCCAAGAGCTTCTTCGAGTC...TGAATTGGAAAGTTGCCCCCATTTTTCAGAGGAAGACATTGGAGTCTTAGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR TCA 72 bp | CTTTCCAATTCATGGTTTGCTATGAGAAAATGTATGTaGTCTTCACAGGGCACCCCAGAGACAAGGCTCCTG | + |
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Preference number: 3 (lower is better) Translates to: LSNSWFAMRKCM*SSQGTPETRLL Trigger: CAGGAGCCTTGTCTCTGGGGTGCCCTGTGAAGATCACATACATTTTCTCATAGCAAACCATGAATTGGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR CCA 72 bp | TACTTTCCTAAGACTCCAATGTCTTCCTCTGAAAAATaGGGGCAACTTTCCAATTCATGGTTTGCTATGAGA | + |
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Preference number: 3 (lower is better) Translates to: YFPKTPMSSSEK*GQLSNSWFAMR Trigger: TCTCATAGCAAACCATGAATTGGAAAGTTGCCCCCATTTTTCAGAGGAAGACATTGGAGTCTTAGGAAAGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| CDS-3UTR GCA 90 bp | CAGCCTCAGATGACCCTGGACCTCTCTAGGCAGCCTGGGGATGAGGTAGGGACCCTCCAAGTGCAGGCCTaGCAGCTGCCTGTGGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: QPQMTLDLSRQPGDEVGTLQVQA*QLPVEW Trigger: CCACTCCACAGGCAGCTGGCAGGCCTGCACTTGGAG...GGTCCCTACCTCATCCCCAGGCTGCCTAGAGAGGTCCAGGGTCATCTGAGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| CDS-3UTR GCA 90 bp | GGCCCCAAGGGCTGGCAGGGGAGTAGGAATCAGGGAATGTCTATGTGCCTTCCTTCAGACAGGCCACGGTaGCCTGAGGGGCAAAGCGGG | + |
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Preference number: 4 (lower is better) Translates to: GPKGWQGSRNQGMSMCLPSDRPR*PEGQSG Trigger: CCCGCTTTGCCCCTCAGGGCACCGTGGCCTGTCTGA...AGGAAGGCACATAGACATTCCCTGATTCCTACTCCCCTGCCAGCCCTTGGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| CDS-3UTR CCA 90 bp | ATGCGATTGAGTTCAAGGCGCTTCTTGGGAGTGTGGAGCACAGGACAGGGCTGGTCCTCGCTGGGGTCATaGGGCAGTTCCTCCTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: MRLSSRRFLGVWSTGQGWSSLGS*GSSSSS Trigger: CGAGGAGGAGGAACTGCCCCATGACCCCAGCGAGGA...CCAGCCCTGTCCTGTGCTCCACACTCCCAAGAAGCGCCTTGAACTCAATCGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| CDS-3UTR CCA 90 bp | CAGCCTCAGATGACCCTGGACCTCTCTAGGCAGCCTGGGGATGAGGTAGGGACCCCACCTCCATGTTGCTaGTCTCACTGGCCCCATACA | + |
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Preference number: 4 (lower is better) Translates to: QPQMTLDLSRQPGDEVGTPPPCC*SHWPHT Trigger: TGTATGGGGCCAGTGAGACCAGCAACATGGAGGTGG...GGTCCCTACCTCATCCCCAGGCTGCCTAGAGAGGTCCAGGGTCATCTGAGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| CDS-3UTR CCA 90 bp | GGCCCCAAGGGCTGGCAGGGGAGTAGGAATCAGGGAATGTCTATGTGCCTTCCTAGTGGGTTCTCCTGCTaGGTCTGCAGGTCTTCTAGC | + |
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Preference number: 4 (lower is better) Translates to: GPKGWQGSRNQGMSMCLPSGFSC*VCRSSS Trigger: GCTAGAAGACCTGCAGACCCAGCAGGAGAACCCACT...AGGAAGGCACATAGACATTCCCTGATTCCTACTCCCCTGCCAGCCCTTGGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| CDS-3UTR TCA 90 bp | GGCCCCAAGGGCTGGCAGGGGAGTAGGAATCAGGGAATGTCTATGTGCCTTCCTACATTCAGGGACCTGTaGTTGGGCACAAACAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: GPKGWQGSRNQGMSMCLPTFRDL*LGTNSL Trigger: CAGGCTGTTTGTGCCCAATCACAGGTCCCTGAATGT...AGGAAGGCACATAGACATTCCCTGATTCCTACTCCCCTGCCAGCCCTTGGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| CDS-3UTR CCA 90 bp | GGAGAGAAGGAAGGTGGGCTTAGTTTCTCCCCACATGTGCAACTGCGAGGACATGCCCTTGGGCGGTGGTaGGTAGAAGCGGTTGTTGGA | + |
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Preference number: 4 (lower is better) Translates to: GEKEGGLSFSPHVQLRGHALGRW*VEAVVG Trigger: TCCAACAACCGCTTCTACCCACCACCGCCCAAGGGC...ATGTCCTCGCAGTTGCACATGTGGGGAGAAACTAAGCCCACCTTCCTTCTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| CDS-3UTR GCA 90 bp | ACAGGACTGGACTTGGGTCATCAGGTCAACAGGCTGAAGGGTAGCAGTGTGACATGTCCACCTCCATGTTaGTGGTCTCACTGGCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: TGLDLGHQVNRLKGSSVTCPPPC*WSHWPH Trigger: ATGGGGCCAGTGAGACCAGCAACATGGAGGTGGACA...TGTCACACTGCTACCCTTCAGCCTGTTGACCTGATGACCCAAGTCCAGTCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| CDS-3UTR CCA 90 bp | CCAGGTAAAGAGATGGCTCACAGTGACCTGGCTGATGTCAAGAAGGCTCAGATGCTTGCCCTTGGGCGGTaGTGGGTAGAAGCGGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: PGKEMAHSDLADVKKAQMLALGR*WVEAVV Trigger: AACAACCGCTTCTACCCACCACCGCCCAAGGGCAAG...CATCTGAGCCTTCTTGACATCAGCCAGGTCACTGTGAGCCATCTCTTTACCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| CDS-3UTR TCA 90 bp | TTTCCTAAGACTCCAATGTCTTCCTCTGAAAAATGGGGGCAACTTTCCAATTCAGGCTGGCCCAGCTCCTaGCCTGGAGGGGGCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: FPKTPMSSSEKWGQLSNSGWPSS*PGGGRK Trigger: CTTCCTGCCCCCTCCAGGTCAGGAGCTGGGCCAGCC...TGAATTGGAAAGTTGCCCCCATTTTTCAGAGGAAGACATTGGAGTCTTAGGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| CDS-3UTR TCA 90 bp | GGAGAGAAGGAAGGTGGGCTTAGTTTCTCCCCACATGTGCAACTGCGAGGACATGGAAGTAGTTGGCATTaGTGTGGTGGACCACAGTGC | + |
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Preference number: 4 (lower is better) Translates to: GEKEGGLSFSPHVQLRGHGSSWH*CGGPQC Trigger: GCACTGTGGTCCACCACATCAATGCCAACTACTTCC...ATGTCCTCGCAGTTGCACATGTGGGGAGAAACTAAGCCCACCTTCCTTCTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| 3UTR CAA 72 bp | AGTGACCTGGCTGATGTCAAGAAGGCTCAGATGCGATaGAGTTCAAGGCGCTTCTTGGGAGTGTGGAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SDLADVKKAQMR*SSRRFLGVWST Trigger: TGTGCTCCACACTCCCAAGAAGCGCCTTGAACTCAATCGCATCTGAGCCTTCTTGACATCAGCCAGGTCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS-3UTR TCA 90 bp | TTTACTTTCCTAAGACTCCAATGTCTTCCTCTGAAAAATGGGGGCAACTTTCCACAGGCCACGGTGCCCTaGGGGGCAAAGCGGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FTFLRLQCLPLKNGGNFPQATVP*GAKRVF Trigger: GAAGACCCGCTTTGCCCCTCAGGGCACCGTGGCCTG...TGGAAAGTTGCCCCCATTTTTCAGAGGAAGACATTGGAGTCTTAGGAAAGTAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS-3UTR CCA 90 bp | GGAGAGAAGGAAGGTGGGCTTAGTTTCTCCCCACATGTGCAACTGCGAGGACATTCCATGAGCAGAGGCTaGAATCGGGCTTCTATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GEKEGGLSFSPHVQLRGHSMSRG*NRASMV Trigger: TACCATAGAAGCCCGATTCCAGCCTCTGCTCATGGA...ATGTCCTCGCAGTTGCACATGTGGGGAGAAACTAAGCCCACCTTCCTTCTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS-3UTR CCA 90 bp | GTTCAAGCTGTTCACCAAGTCCCCAAAAGTAGCCGATGGGAACTGGTGGCCATCATGCTTAACAGGCGATaGATGATGACCTCCTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VQAVHQVPKSSRWELVAIMLNRR*MMTSLP Trigger: GGGCAAGGAGGTCATCATCCATCGCCTGTTAAGCAT...GATGGCCACCAGTTCCCATCGGCTACTTTTGGGGACTTGGTGAACAGCTTGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS-3UTR CCA 90 bp | TTTACTTTCCTAAGACTCCAATGTCTTCCTCTGAAAAATGGGGGCAACTTTCCAAGGAAGGGCCGGAAGTaGCGGGCAGCAAACGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FTFLRLQCLPLKNGGNFPRKGRK*RAANAA Trigger: TGCAGCGTTTGCTGCCCGCCACTTCCGGCCCTTCCT...TGGAAAGTTGCCCCCATTTTTCAGAGGAAGACATTGGAGTCTTAGGAAAGTAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS-3UTR GCA 90 bp | GCAACTTTCCAATTCATGGTTTGCTATGAGAAAATGTATGTGATCTTCACAGGGCTGCTGTGGTCCAGTTaGGGAGGCCGGACAGAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: ATFQFMVCYEKMYVIFTGLLWSS*GGRTER Trigger: TCGCTCTGTCCGGCCTCCGCAACTGGACCACAGCAG...CCCTGTGAAGATCACATACATTTTCTCATAGCAAACCATGAATTGGAAAGTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS-3UTR CCA 90 bp | TTTACTTTCCTAAGACTCCAATGTCTTCCTCTGAAAAATGGGGGCAACTTTCCACAGCTGCCTGTGGAGTaGGTTCTCCTGCTGGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FTFLRLQCLPLKNGGNFPQLPVE*VLLLGL Trigger: CAGACCCAGCAGGAGAACCCACTCCACAGGCAGCTG...TGGAAAGTTGCCCCCATTTTTCAGAGGAAGACATTGGAGTCTTAGGAAAGTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGTAAAGAGATGGCTCACAGTGACCTGGCTGATGTCAAGAAGGCTCAGATGCACAGCAAGATGGAATaGACAAGTTTCTTCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGKEMAHSDLADVKKAQMHSKME*TSFFSA Trigger: AGCTGAGAAGAAACTTGTTCATTCCATCTTGCTGTG...CATCTGAGCCTTCTTGACATCAGCCAGGTCACTGTGAGCCATCTCTTTACCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCTAAGACTCCAATGTCTTCCTCTGAAAAATGGGGGCAACTTTCCAATTCACTGTACTTCTCCAAGTaGAGGCCTGCCAGCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FPKTPMSSSEKWGQLSNSLYFSK*RPASCL Trigger: CAGGCAGCTGGCAGGCCTGCACTTGGAGAAGTACAG...TGAATTGGAAAGTTGCCCCCATTTTTCAGAGGAAGACATTGGAGTCTTAGGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS-3UTR CCA 90 bp | TTTACTTTCCTAAGACTCCAATGTCTTCCTCTGAAAAATGGGGGCAACTTTCCAATATGGCCGGTGAACTaGCCGGGCGAGAACCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FTFLRLQCLPLKNGGNFPIWPVN*PGENQK Trigger: CTTCTGGTTCTCGCCCGGCCAGTTCACCGGCCATAT...TGGAAAGTTGCCCCCATTTTTCAGAGGAAGACATTGGAGTCTTAGGAAAGTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS-3UTR TCA 90 bp | GGGGCAACTTTCCAATTCATGGTTTGCTATGAGAAAATGTATGTGATCTTCACATGGTCATGGTCTCCATaGGCAGAGGCTGGAATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GATFQFMVCYEKMYVIFTWSWSP*AEAGIG Trigger: CCCGATTCCAGCCTCTGCTCATGGAGACCATGACCA...TGTGAAGATCACATACATTTTCTCATAGCAAACCATGAATTGGAAAGTTGCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS-3UTR TCA 90 bp | TTTACTTTCCTAAGACTCCAATGTCTTCCTCTGAAAAATGGGGGCAACTTTCCATCCCAGCTCAGCTCCTaGTGCCACTTGATCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FTFLRLQCLPLKNGGNFPSQLSS*CHLISS Trigger: TGAGGAGATCAAGTGGCATCAGGAGCTGAGCTGGGA...TGGAAAGTTGCCCCCATTTTTCAGAGGAAGACATTGGAGTCTTAGGAAAGTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS-3UTR CCA 90 bp | TTTACTTTCCTAAGACTCCAATGTCTTCCTCTGAAAAATGGGGGCAACTTTCCATTGGATAAGATGATATaGCCGGTGAACTGGCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FTFLRLQCLPLKNGGNFPLDKMI*PVNWPG Trigger: GCCCGGCCAGTTCACCGGCCATATCATCTTATCCAA...TGGAAAGTTGCCCCCATTTTTCAGAGGAAGACATTGGAGTCTTAGGAAAGTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS-3UTR CCA 90 bp | TTTACTTTCCTAAGACTCCAATGTCTTCCTCTGAAAAATGGGGGCAACTTTCCAGTTTCTTCTCAGCTCTaGCTCTGTCAAAGGCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: FTFLRLQCLPLKNGGNFPVSSQL*LCQRPP Trigger: CGGAGGCCTTTGACAGAGCCAGAGCTGAGAAGAAAC...TGGAAAGTTGCCCCCATTTTTCAGAGGAAGACATTGGAGTCTTAGGAAAGTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCTAAGACTCCAATGTCTTCCTCTGAAAAATGGGGGCAACTTTCCAATTCACAGGCTTCATGGAGGTaGTGTCAAGGAAGTAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FPKTPMSSSEKWGQLSNSQASWR*CQGSSW Trigger: CCAACTACTTCCTTGACATCACCTCCATGAAGCCTG...TGAATTGGAAAGTTGCCCCCATTTTTCAGAGGAAGACATTGGAGTCTTAGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS-3UTR CCA 90 bp | ACACCTGCTCTGTTTAGTCTGATAAGAAGACATGATTTGAAAACATTCCCTTCCACGAAGGGGCGTGGATaGAACATGCTTAACAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: TPALFSLIRRHDLKTFPSTKGRG*NMLNRR Trigger: TCGCCTGTTAAGCATGTTCCATCCACGCCCCTTCGT...GGAAGGGAATGTTTTCAAATCATGTCTTCTTATCAGACTAAACAGAGCAGGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS-3UTR CCA 90 bp | ACACCTGCTCTGTTTAGTCTGATAAGAAGACATGATTTGAAAACATTCCCTTCCTCCTCAAACACAAACTaGAGGGGTTCTCCTGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TPALFSLIRRHDLKTFPSSSNTN*RGSPEG Trigger: GCCCTCAGGAGAACCCCTCCAGTTTGTGTTTGAGGA...GGAAGGGAATGTTTTCAAATCATGTCTTCTTATCAGACTAAACAGAGCAGGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS-3UTR CCA 90 bp | ACACCTGCTCTGTTTAGTCTGATAAGAAGACATGATTTGAAAACATTCCCTTCCGGACCACAGTGCCGTTaGGCAGACAGATCATCATCT | + |
|
Preference number: 4 (lower is better) Translates to: TPALFSLIRRHDLKTFPSGPQCR*ADRSSS Trigger: AGATGATGATCTGTCTGCCCAACGGCACTGTGGTCC...GGAAGGGAATGTTTTCAAATCATGTCTTCTTATCAGACTAAACAGAGCAGGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS-3UTR CCA 90 bp | TTTACTTTCCTAAGACTCCAATGTCTTCCTCTGAAAAATGGGGGCAACTTTCCACTGATGTACATATCCTaGTCAGTGTCCAGCGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FTFLRLQCLPLKNGGNFPLMYIS*SVSSEE Trigger: TTCCTCGCTGGACACTGACCAGGATATGTACATCAG...TGGAAAGTTGCCCCCATTTTTCAGAGGAAGACATTGGAGTCTTAGGAAAGTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCTAAGACTCCAATGTCTTCCTCTGAAAAATGGGGGCAACTTTCCAATTCAAGCTGGATGAGAAGCTaGAGACGTTATTATTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FPKTPMSSSEKWGQLSNSSWMRS*RRYYSP Trigger: TGGAGAATAATAACGTCTTCAGCTTCTCATCCAGCT...TGAATTGGAAAGTTGCCCCCATTTTTCAGAGGAAGACATTGGAGTCTTAGGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS-3UTR GCA 90 bp | ACACCTGCTCTGTTTAGTCTGATAAGAAGACATGATTTGAAAACATTCCCTTCCCTAGGAAGCCATCTTTaGTTTTGGTCATGGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TPALFSLIRRHDLKTFPSLGSHL*FWSWSP Trigger: TGGAGACCATGACCAAAAGCAAAGATGGCTTCCTAG...GGAAGGGAATGTTTTCAAATCATGTCTTCTTATCAGACTAAACAGAGCAGGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS CCA 90 bp | TCTGTCCCCAGGACCTTTAATGCCGATTCCTGCCGCGCGGCCGCCTaGGCGTCGGCGAGGAGCGCGCAGGCCCGGGCAGCGGCGACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: SVPRTFNADSCRAAA*ASARSAQARAAATA Trigger: CGCTGTCGCCGCTGCCCGGGCCTGCGCGCTCCTCGCCGACGCCCAGGCGGCCGCGCGGCAGGAATCGGCATTAAAGGTCCTGGGGACAGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS GCA 90 bp | GAAGGGCCGGAAGTGGCGGGCAGCAAACGCTGCACTCGGCGAGGCTaGTGTGGTCCAGTTGCGGAGGCCGGACAGAGCGAGGCGGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: EGPEVAGSKRCTRRG*CGPVAEAGQSEAGD Trigger: GTCTCCCGCCTCGCTCTGTCCGGCCTCCGCAACTGGACCACAGCAGCCTCGCCGAGTGCAGCGTTTGCTGCCCGCCACTTCCGGCCCTTC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS CCA 90 bp | GCCGGAAGTGGCGGGCAGCAAACGCTGCACTCGGCGAGGCTGCTGTaGTCCAGTTGCGGAGGCCGGACAGAGCGAGGCGGGAGACCCCTA | + |
|
Preference number: 5 (lower is better) Translates to: AGSGGQQTLHSARLL*SSCGGRTERGGRPL Trigger: TAGGGGTCTCCCGCCTCGCTCTGTCCGGCCTCCGCAACTGGACCACAGCAGCCTCGCCGAGTGCAGCGTTTGCTGCCCGCCACTTCCGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS GCA 90 bp | AAGAGAAAGAGGCCATCTGTCCCCAGGACCTTTAATGCCGATTCCTaGCGCGCGGCCGCCTGGGCGTCGGCGAGGAGCGCGCAGGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: KRKRPSVPRTFNADS*RAAAWASARSAQAR Trigger: CCGGGCCTGCGCGCTCCTCGCCGACGCCCAGGCGGCCGCGCGGCAGGAATCGGCATTAAAGGTCCTGGGGACAGATGGCCTCTTTCTCTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS GCA 90 bp | GGCGGGCAGCAAACGCTGCACTCGGCGAGGCTGCTGTGGTCCAGTTaGGGAGGCCGGACAGAGCGAGGCGGGAGACCCCTAGGAAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GGQQTLHSARLLWSS*GGRTERGGRPLGSH Trigger: ATGGCTTCCTAGGGGTCTCCCGCCTCGCTCTGTCCGGCCTCCGCAACTGGACCACAGCAGCCTCGCCGAGTGCAGCGTTTGCTGCCCGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS TCA 90 bp | ATGGCCACCTCCAGGCGCCGGGCAGCCTCTTCCCAGCTCAGCTCCTaGTGCCACTTGATCTCCTCAAACACAAACTGGAGGGGTTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: MATSRRRAASSQLSS*CHLISSNTNWRGSP Trigger: AGGAGAACCCCTCCAGTTTGTGTTTGAGGAGATCAAGTGGCATCAGGAGCTGAGCTGGGAAGAGGCTGCCCGGCGCCTGGAGGTGGCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGACTGGACTTGGGTCATCAGGTCAACAGGCTGAAGGGTAGCAGTGTGACAGCTGCTGTGGTCCAGTaGCGGAGGCCGGACAGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: TGLDLGHQVNRLKGSSVTAAVVQ*RRPDRA Trigger: CGCTCTGTCCGGCCTCCGCAACTGGACCACAGCAGC...TGTCACACTGCTACCCTTCAGCCTGTTGACCTGATGACCCAAGTCCAGTCCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS GCA 90 bp | TGCAGGCCTGCCAGCTGCCTGTGGAGTGGGTTCTCCTGCTGGGTCTaGAGGTCTTCTAGCTCCTTTACCAGGGACCAGGTACTGATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CRPASCLWSGFSCWV*RSSSSFTRDQVLMK Trigger: CTTCATCAGTACCTGGTCCCTGGTAAAGGAGCTAGAAGACCTGCAGACCCAGCAGGAGAACCCACTCCACAGGCAGCTGGCAGGCCTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS CCA 90 bp | CCAGCTCCATCTGGGGGACGTAGCCAATGTCCACCTCCATGTTGCTaGTCTCACTGGCCCCATACAGCCACTCCATGTCCACATTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PAPSGGRSQCPPPCC*SHWPHTATPCPHSG Trigger: CCCTGAATGTGGACATGGAGTGGCTGTATGGGGCCAGTGAGACCAGCAACATGGAGGTGGACATTGGCTACGTCCCCCAGATGGAGCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS GCA 90 bp | CCTCCAGCTCCATCTGGGGGACGTAGCCAATGTCCACCTCCATGTTaGTGGTCTCACTGGCCCCATACAGCCACTCCATGTCCACATTCA | + |
|
Preference number: 5 (lower is better) Translates to: PPAPSGGRSQCPPPC*WSHWPHTATPCPHS Trigger: TGAATGTGGACATGGAGTGGCTGTATGGGGCCAGTGAGACCAGCAACATGGAGGTGGACATTGGCTACGTCCCCCAGATGGAGCTGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS CCA 90 bp | CGGATGTGTGTAGCATCTTTGGATAAGATGATATGGCCGGTGAACTaGCCGGGCGAGAACCAGAAGGGGAAGTCAGGAGGCTCGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RMCVASLDKMIWPVN*PGENQKGKSGGSLS Trigger: GCTCAGCGAGCCTCCTGACTTCCCCTTCTGGTTCTCGCCCGGCCAGTTCACCGGCCATATCATCTTATCCAAAGATGCTACACACATCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS CCA 90 bp | TCTGGGGGACGTAGCCAATGTCCACCTCCATGTTGCTGGTCTCACTaGCCCCATACAGCCACTCCATGTCCACATTCAGGGACCTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SGGRSQCPPPCCWSH*PHTATPCPHSGTCD Trigger: ATCACAGGTCCCTGAATGTGGACATGGAGTGGCTGTATGGGGCCAGTGAGACCAGCAACATGGAGGTGGACATTGGCTACGTCCCCCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS-3UTR CAA 90 bp | CTGGTGAGACCAGGTAAAGAGATGGCTCACAGTGACCTGGCTGATGTCAAGAAGTGGATGATGACCTCCTaGCCCTTGGGCGGTGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LVRPGKEMAHSDLADVKKWMMTS*PLGGGG Trigger: CCCACCACCGCCCAAGGGCAAGGAGGTCATCATCCA...CTTCTTGACATCAGCCAGGTCACTGTGAGCCATCTCTTTACCTGGTCTCACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS-3UTR CAA 90 bp | ATGCGATTGAGTTCAAGGCGCTTCTTGGGAGTGTGGAGCACAGGACAGGGCTGGTGGACCACAGTGCCGTaGGGCAGACAGATCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: MRLSSRRFLGVWSTGQGWWTTVP*GRQIII Trigger: GATGATGATCTGTCTGCCCAACGGCACTGTGGTCCA...CCAGCCCTGTCCTGTGCTCCACACTCCCAAGAAGCGCCTTGAACTCAATCGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS-3UTR CAA 90 bp | ATGCGATTGAGTTCAAGGCGCTTCTTGGGAGTGTGGAGCACAGGACAGGGCTGGCTGATGAAGCTCTCATaGAGGAGAGTGAGGATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: MRLSSRRFLGVWSTGQGWLMKLS*RRVRMG Trigger: GCCCATCCTCACTCTCCTCAATGAGAGCTTCATCAG...CCAGCCCTGTCCTGTGCTCCACACTCCCAAGAAGCGCCTTGAACTCAATCGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS TCA 90 bp | TCACTGGCCCCATACAGCCACTCCATGTCCACATTCAGGGACCTGTaGTTGGGCACAAACAGCCTGAAGTCACGGATGTGTGTAGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: SLAPYSHSMSTFRDL*LGTNSLKSRMCVAS Trigger: AGATGCTACACACATCCGTGACTTCAGGCTGTTTGTGCCCAATCACAGGTCCCTGAATGTGGACATGGAGTGGCTGTATGGGGCCAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS CCA 90 bp | AGGAAGCCATCTTTGCTTTTGGTCATGGTCTCCATGAGCAGAGGCTaGAATCGGGCTTCTATGGTAAGAGTCTCCTCGCTGGGGTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: RKPSLLLVMVSMSRG*NRASMVRVSSLGSW Trigger: CCATGACCCCAGCGAGGAGACTCTTACCATAGAAGCCCGATTCCAGCCTCTGCTCATGGAGACCATGACCAAAAGCAAAGATGGCTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS CCA 90 bp | AGCCTGAAGTCACGGATGTGTGTAGCATCTTTGGATAAGATGATATaGCCGGTGAACTGGCCGGGCGAGAACCAGAAGGGGAAGTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLKSRMCVASLDKMI*PVNWPGENQKGKSG Trigger: TCCTGACTTCCCCTTCTGGTTCTCGCCCGGCCAGTTCACCGGCCATATCATCTTATCCAAAGATGCTACACACATCCGTGACTTCAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS-3UTR CAA 90 bp | GGAGAGAAGGAAGGTGGGCTTAGTTTCTCCCCACATGTGCAACTGCGAGGACATCCTAGGAAGCCATCTTaGCTTTTGGTCATGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GEKEGGLSFSPHVQLRGHPRKPS*LLVMVS Trigger: GGAGACCATGACCAAAAGCAAAGATGGCTTCCTAGG...ATGTCCTCGCAGTTGCACATGTGGGGAGAAACTAAGCCCACCTTCCTTCTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS TCA 90 bp | CAGGAACTGCATGTAGGTAGCTGTGGACGGGTCCTCAAAGCTGGATaGGAAGCTGAAGACGTTATTATTCTCCATGTCTTCAGGCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: QELHVGSCGRVLKAG*EAEDVIILHVFRLH Trigger: ATGAAGCCTGAAGACATGGAGAATAATAACGTCTTCAGCTTCTCATCCAGCTTTGAGGACCCGTCCACAGCTACCTACATGCAGTTCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS-3UTR CAA 90 bp | ACACCTGCTCTGTTTAGTCTGATAAGAAGACATGATTTGAAAACATTCCCTTCCAAGCCATCTTTGCTTTaGGTCATGGTCTCCATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TPALFSLIRRHDLKTFPSKPSLL*VMVSMS Trigger: GCTCATGGAGACCATGACCAAAAGCAAAGATGGCTT...GGAAGGGAATGTTTTCAAATCATGTCTTCTTATCAGACTAAACAGAGCAGGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS CCA 72 bp | GGCGGGCAGCAAACGCTGCACTCGGCGAGGCTGCTGTaGTCCAGTTGCGGAGGCCGGACAGAGCGAGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: GGQQTLHSARLL*SSCGGRTERGG Trigger: CCCGCCTCGCTCTGTCCGGCCTCCGCAACTGGACCACAGCAGCCTCGCCGAGTGCAGCGTTTGCTGCCCGCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS GCA 72 bp | AGGCCATCTGTCCCCAGGACCTTTAATGCCGATTCCTaGCGCGCGGCCGCCTGGGCGTCGGCGAGGAGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: RPSVPRTFNADS*RAAAWASARSA Trigger: CGCGCTCCTCGCCGACGCCCAGGCGGCCGCGCGGCAGGAATCGGCATTAAAGGTCCTGGGGACAGATGGCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS CAA 90 bp | TGGCGGGCAGCAAACGCTGCACTCGGCGAGGCTGCTGTGGTCCAGTaGCGGAGGCCGGACAGAGCGAGGCGGGAGACCCCTAGGAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: WRAANAALGEAAVVQ*RRPDRARRETPRKP Trigger: TGGCTTCCTAGGGGTCTCCCGCCTCGCTCTGTCCGGCCTCCGCAACTGGACCACAGCAGCCTCGCCGAGTGCAGCGTTTGCTGCCCGCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS GCA 72 bp | GGGCAGGAAGGGCCGGAAGTGGCGGGCAGCAAACGCTaGACTCGGCGAGGCTGCTGTGGTCCAGTTGCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GQEGPEVAGSKR*TRRGCCGPVAE Trigger: CTCCGCAACTGGACCACAGCAGCCTCGCCGAGTGCAGCGTTTGCTGCCCGCCACTTCCGGCCCTTCCTGCCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
||
| CDS CAA 72 bp | GCAAACGCTGCACTCGGCGAGGCTGCTGTGGTCCAGTaGCGGAGGCCGGACAGAGCGAGGCGGGAGACCCCT | + |
|
Preference number: 6 (lower is better) Translates to: ANAALGEAAVVQ*RRPDRARRETP Trigger: AGGGGTCTCCCGCCTCGCTCTGTCCGGCCTCCGCAACTGGACCACAGCAGCCTCGCCGAGTGCAGCGTTTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| CDS GCA 72 bp | CAAACGCTGCACTCGGCGAGGCTGCTGTGGTCCAGTTaGGGAGGCCGGACAGAGCGAGGCGGGAGACCCCTA | + |
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Preference number: 6 (lower is better) Translates to: QTLHSARLLWSS*GGRTERGGRPL Trigger: TAGGGGTCTCCCGCCTCGCTCTGTCCGGCCTCCGCAACTGGACCACAGCAGCCTCGCCGAGTGCAGCGTTTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| CDS GCA 72 bp | GAAGTGGCGGGCAGCAAACGCTGCACTCGGCGAGGCTaGTGTGGTCCAGTTGCGGAGGCCGGACAGAGCGAG | + |
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Preference number: 6 (lower is better) Translates to: EVAGSKRCTRRG*CGPVAEAGQSE Trigger: CTCGCTCTGTCCGGCCTCCGCAACTGGACCACAGCAGCCTCGCCGAGTGCAGCGTTTGCTGCCCGCCACTTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| CDS TCA 72 bp | GAATCGCTGATGGCAGTCAGACAGGCCACGGTGCCCTaGGGGGCAAAGCGGGTCTTCACGAAGGGGCGTGGA | + |
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Preference number: 6 (lower is better) Translates to: ESLMAVRQATVP*GAKRVFTKGRG Trigger: TCCACGCCCCTTCGTGAAGACCCGCTTTGCCCCTCAGGGCACCGTGGCCTGTCTGACTGCCATCAGCGATTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| CDS TCA 72 bp | CGGGCGAGAACCAGAAGGGGAAGTCAGGAGGCTCGCTaGGCTGAAACTCCGCGTGGATCCGGAACATCACGG | + |
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Preference number: 6 (lower is better) Translates to: RARTRRGSQEAR*AETPRGSGTSR Trigger: CCGTGATGTTCCGGATCCACGCGGAGTTTCAGCTCAGCGAGCCTCCTGACTTCCCCTTCTGGTTCTCGCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| CDS GCA 72 bp | GGAAAGCTGTACTTCTCCAAGTGCAGGCCTGCCAGCTaGCTGTGGAGTGGGTTCTCCTGCTGGGTCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: GKLYFSKCRPAS*LWSGFSCWVCR Trigger: CCTGCAGACCCAGCAGGAGAACCCACTCCACAGGCAGCTGGCAGGCCTGCACTTGGAGAAGTACAGCTTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| CDS CCA 72 bp | AGGCCTGCCAGCTGCCTGTGGAGTGGGTTCTCCTGCTaGGTCTGCAGGTCTTCTAGCTCCTTTACCAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: RPASCLWSGFSC*VCRSSSSFTRD Trigger: GTCCCTGGTAAAGGAGCTAGAAGACCTGCAGACCCAGCAGGAGAACCCACTCCACAGGCAGCTGGCAGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| CDS CAA 90 bp | CCGGACAGAGCGAGGCGGGAGACCCCTAGGAAGCCATCTTTGCTTTaGGTCATGGTCTCCATGAGCAGAGGCTGGAATCGGGCTTCTATG | + |
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Preference number: 6 (lower is better) Translates to: PDRARRETPRKPSLL*VMVSMSRGWNRASM Trigger: CATAGAAGCCCGATTCCAGCCTCTGCTCATGGAGACCATGACCAAAAGCAAAGATGGCTTCCTAGGGGTCTCCCGCCTCGCTCTGTCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| CDS GCA 72 bp | CCATCTGGGGGACGTAGCCAATGTCCACCTCCATGTTaGTGGTCTCACTGGCCCCATACAGCCACTCCATGT | + |
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Preference number: 6 (lower is better) Translates to: PSGGRSQCPPPC*WSHWPHTATPC Trigger: ACATGGAGTGGCTGTATGGGGCCAGTGAGACCAGCAACATGGAGGTGGACATTGGCTACGTCCCCCAGATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| CDS CCA 72 bp | CAGGCGATGGATGATGACCTCCTTGCCCTTGGGCGGTaGTGGGTAGAAGCGGTTGTTGGACAAATAGCCCGT | + |
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Preference number: 6 (lower is better) Translates to: QAMDDDLLALGR*WVEAVVGQIAR Trigger: ACGGGCTATTTGTCCAACAACCGCTTCTACCCACCACCGCCCAAGGGCAAGGAGGTCATCATCCATCGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| CDS CAA 72 bp | GACAGAGCGAGGCGGGAGACCCCTAGGAAGCCATCTTaGCTTTTGGTCATGGTCTCCATGAGCAGAGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: DRARRETPRKPS*LLVMVSMSRGW Trigger: CCAGCCTCTGCTCATGGAGACCATGACCAAAAGCAAAGATGGCTTCCTAGGGGTCTCCCGCCTCGCTCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| CDS CCA 72 bp | GCGATGGATGATGACCTCCTTGCCCTTGGGCGGTGGTaGGTAGAAGCGGTTGTTGGACAAATAGCCCGTGAA | + |
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Preference number: 6 (lower is better) Translates to: AMDDDLLALGRW*VEAVVGQIARE Trigger: TTCACGGGCTATTTGTCCAACAACCGCTTCTACCCACCACCGCCCAAGGGCAAGGAGGTCATCATCCATCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| CDS CCA 72 bp | GTAGCATCTTTGGATAAGATGATATGGCCGGTGAACTaGCCGGGCGAGAACCAGAAGGGGAAGTCAGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: VASLDKMIWPVN*PGENQKGKSGG Trigger: GCCTCCTGACTTCCCCTTCTGGTTCTCGCCCGGCCAGTTCACCGGCCATATCATCTTATCCAAAGATGCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| CDS CCA 72 bp | TCACGGATGTGTGTAGCATCTTTGGATAAGATGATATaGCCGGTGAACTGGCCGGGCGAGAACCAGAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: SRMCVASLDKMI*PVNWPGENQKG Trigger: CCCCTTCTGGTTCTCGCCCGGCCAGTTCACCGGCCATATCATCTTATCCAAAGATGCTACACACATCCGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| CDS CCA 72 bp | TCTTTGCTTTTGGTCATGGTCTCCATGAGCAGAGGCTaGAATCGGGCTTCTATGGTAAGAGTCTCCTCGCTG | + |
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Preference number: 6 (lower is better) Translates to: SLLLVMVSMSRG*NRASMVRVSSL Trigger: CAGCGAGGAGACTCTTACCATAGAAGCCCGATTCCAGCCTCTGCTCATGGAGACCATGACCAAAAGCAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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| CDS CAA 72 bp | ACAAACAGCCTGAAGTCACGGATGTGTGTAGCATCTTaGGATAAGATGATATGGCCGGTGAACTGGCCGGGC | + |
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Preference number: 6 (lower is better) Translates to: TNSLKSRMCVAS*DKMIWPVNWPG Trigger: GCCCGGCCAGTTCACCGGCCATATCATCTTATCCAAAGATGCTACACACATCCGTGACTTCAGGCTGTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060435.8 |
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