Pregenerated sensors for SELENOI (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075703Ensembl transcript IDs: ENSMUST00000132404.8, ENSMUST00000145167.9, ENSMUST00000145858.8
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTCCAGCAAGATCAAGTATCTCCCAGATGGAGTTCATAGCACACTaGTCCCAAAGCTGCCTCCCAGCCAAAAGAGGGCCGGGCCGACCC | + |
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Preference number: 1 (lower is better) Translates to: APARSSISQMEFIAH*SQSCLPAKRGPGRP Trigger: GGGTCGGCCCGGCCCTCTTTTGGCTGGGAGGCAGCTTTGGGAGCAGTGTGCTATGAACTCCATCTGGGAGATACTTGATCTTGCTGGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
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| 3UTR GCA 90 bp | CTCACCCCCAGGGAGAAGGAAAGCAAGCAGCAACTGGACAGACAGTaGCAGGGTGCTAACTGTGGCCGATGTGGAGCTCTGAGACTCCTA | + |
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Preference number: 1 (lower is better) Translates to: LTPREKESKQQLDRQ*QGANCGRCGALRLL Trigger: TAGGAGTCTCAGAGCTCCACATCGGCCACAGTTAGCACCCTGGCACTGTCTGTCCAGTTGCTGCTTGCTTTCCTTCTCCCTGGGGGTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
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| 3UTR CCA 90 bp | CCACAGCAGGTGGGGAAGGCAGTTCACTGGAGGGCAACCGGGATTTaGCAACTGTACCCTGTTCTGGAGTCACTGGCATCTCTGGCTGAA | + |
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Preference number: 1 (lower is better) Translates to: PQQVGKAVHWRATGI*QLYPVLESLASLAE Trigger: TTCAGCCAGAGATGCCAGTGACTCCAGAACAGGGTACAGTTGCCAAATCCCGGTTGCCCTCCAGTGAACTGCCTTCCCCACCTGCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
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| 3UTR CCA 90 bp | CGGGATACTGGACAACCTCCACAGCAGGTGGGGAAGGCAGTTCACTaGAGGGCAACCGGGATTTGGCAACTGTACCCTGTTCTGGAGTCA | + |
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Preference number: 1 (lower is better) Translates to: RDTGQPPQQVGKAVH*RATGIWQLYPVLES Trigger: TGACTCCAGAACAGGGTACAGTTGCCAAATCCCGGTTGCCCTCCAGTGAACTGCCTTCCCCACCTGCTGTGGAGGTTGTCCAGTATCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
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| 3UTR CCA 90 bp | TGCCCTGGAGGGGAAAGGTGGGGAAGTGGCTTTCCATGTGGGCCATaGGCACGCCAAATCCACACAAAGCAACAGACTAATGAGGGTTGC | + |
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Preference number: 1 (lower is better) Translates to: CPGGERWGSGFPCGP*ARQIHTKQQTNEGC Trigger: GCAACCCTCATTAGTCTGTTGCTTTGTGTGGATTTGGCGTGCCCATGGCCCACATGGAAAGCCACTTCCCCACCTTTCCCCTCCAGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
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| 3UTR TCA 90 bp | TGGGAAAGTTACAGGAAGGGGCGTGGCAGAGATACACAGAGCCCCTaGCAATCAAGCCCGCATCCGCCGCTGTATCGCTACAACATATGG | + |
|
Preference number: 1 (lower is better) Translates to: WESYRKGRGRDTQSP*QSSPHPPLYRYNIW Trigger: CCATATGTTGTAGCGATACAGCGGCGGATGCGGGCTTGATTGTCAGGGGCTCTGTGTATCTCTGCCACGCCCCTTCCTGTAACTTTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
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| 3UTR GCA 90 bp | GGAAGTGAAATATCATCTACTGTGAGGGCTTTCTCAGGGCTGAGATaGCCTGGAGGGGAAAGGTGGGGAAGTGGCTTTCCATGTGGGCCA | + |
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Preference number: 1 (lower is better) Translates to: GSEISSTVRAFSGLR*PGGERWGSGFPCGP Trigger: TGGCCCACATGGAAAGCCACTTCCCCACCTTTCCCCTCCAGGGCATCTCAGCCCTGAGAAAGCCCTCACAGTAGATGATATTTCACTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
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| 3UTR TCA 90 bp | TCAGTTACCACCGTTAGGCAGGAAGGGAGAGGAAACCTGGGTTCCTaGGTACCTTGGCCATTATTGTCTTCCACTCTGCCCAAAAGTGGG | + |
|
Preference number: 1 (lower is better) Translates to: SVTTVRQEGRGNLGS*VPWPLLSSTLPKSG Trigger: CCCACTTTTGGGCAGAGTGGAAGACAATAATGGCCAAGGTACTCAGGAACCCAGGTTTCCTCTCCCTTCCTGCCTAACGGTGGTAACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
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| 3UTR TCA 90 bp | TGGAAACCAGTCTTTCTGGCTCGAAGTCCCCTGGTGAAAGGGAAGTaGAATATCATCTACTGTGAGGGCTTTCTCAGGGCTGAGATGCCC | + |
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Preference number: 1 (lower is better) Translates to: WKPVFLARSPLVKGK*NIIYCEGFLRAEMP Trigger: GGGCATCTCAGCCCTGAGAAAGCCCTCACAGTAGATGATATTTCACTTCCCTTTCACCAGGGGACTTCGAGCCAGAAAGACTGGTTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
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| 3UTR CCA 90 bp | CATCCCCACAGCCAACTCCATCTCTGCATCTGTTTCTGGCTAATTTaGAGACCCAGAGTCAAAGCTGCAGACCTCAGGCTTAACCTTCTC | + |
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Preference number: 1 (lower is better) Translates to: HPHSQLHLCICFWLI*RPRVKAADLRLNLL Trigger: GAGAAGGTTAAGCCTGAGGTCTGCAGCTTTGACTCTGGGTCTCCAAATTAGCCAGAAACAGATGCAGAGATGGAGTTGGCTGTGGGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
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| 3UTR CCA 90 bp | GTTACCATTCAGTTACCACCGTTAGGCAGGAAGGGAGAGGAAACCTaGGTTCCTGAGTACCTTGGCCATTATTGTCTTCCACTCTGCCCA | + |
|
Preference number: 1 (lower is better) Translates to: VTIQLPPLGRKGEET*VPEYLGHYCLPLCP Trigger: TGGGCAGAGTGGAAGACAATAATGGCCAAGGTACTCAGGAACCCAGGTTTCCTCTCCCTTCCTGCCTAACGGTGGTAACTGAATGGTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
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| 3UTR TCA 90 bp | AGCCAGCATTCTGGAAACCAGTCTTTCTGGCTCGAAGTCCCCTGGTaGAAGGGAAGTGAAATATCATCTACTGTGAGGGCTTTCTCAGGG | + |
|
Preference number: 1 (lower is better) Translates to: SQHSGNQSFWLEVPW*KGSEISSTVRAFSG Trigger: CCCTGAGAAAGCCCTCACAGTAGATGATATTTCACTTCCCTTTCACCAGGGGACTTCGAGCCAGAAAGACTGGTTTCCAGAATGCTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
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| 3UTR TCA 90 bp | GTTTCCAGTCCTTCACCAACCAAGAGATTTAAGGCATTCACCACATaGATCTGTCTGCAAGCCAGCCGGGATGCAGAGAGCTGTTTCTGT | + |
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Preference number: 1 (lower is better) Translates to: VSSPSPTKRFKAFTT*ICLQASRDAESCFC Trigger: ACAGAAACAGCTCTCTGCATCCCGGCTGGCTTGCAGACAGATTCATGTGGTGAATGCCTTAAATCTCTTGGTTGGTGAAGGACTGGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
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| 3UTR CCA 90 bp | TCAAGAAAACAAGGACCTTCTAACAAACTCACACAGAGCACAAGGTaGACGGAACAGTTATCCTCACACAACCGGCTCACCTTCCAGCCT | + |
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Preference number: 1 (lower is better) Translates to: SRKQGPSNKLTQSTR*TEQLSSHNRLTFQP Trigger: AGGCTGGAAGGTGAGCCGGTTGTGTGAGGATAACTGTTCCGTCCACCTTGTGCTCTGTGTGAGTTTGTTAGAAGGTCCTTGTTTTCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
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| 3UTR GCA 90 bp | ACAAGCCTTGCAACACTCCAGAAAAGTGAAGCAAGGGCAAAGCTCTaGTCCAGCAAGATCAAGTATCTCCCAGATGGAGTTCATAGCACA | + |
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Preference number: 1 (lower is better) Translates to: TSLATLQKSEARAKL*SSKIKYLPDGVHST Trigger: TGTGCTATGAACTCCATCTGGGAGATACTTGATCTTGCTGGAGCAGAGCTTTGCCCTTGCTTCACTTTTCTGGAGTGTTGCAAGGCTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
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| 3UTR TCA 90 bp | ACGGAACAGTTATCCTCACACAACCGGCTCACCTTCCAGCCTCCATaGTGGCAATTTATTAACAAGCACAGAATCACTACCCATTTTCAC | + |
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Preference number: 1 (lower is better) Translates to: TEQLSSHNRLTFQPP*WQFINKHRITTHFH Trigger: GTGAAAATGGGTAGTGATTCTGTGCTTGTTAATAAATTGCCATCATGGAGGCTGGAAGGTGAGCCGGTTGTGTGAGGATAACTGTTCCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
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| 3UTR TCA 90 bp | GACAAAGAAAATTCTGGTCTGTCGTCACAGTTCCTAAAGAGGGCTTaGTCAAATCCAGAAGTAATGATGAGAGCATCCCAAACACGCGCA | + |
|
Preference number: 1 (lower is better) Translates to: DKENSGLSSQFLKRA*SNPEVMMRASQTRA Trigger: TGCGCGTGTTTGGGATGCTCTCATCATTACTTCTGGATTTGATCAAGCCCTCTTTAGGAACTGTGACGACAGACCAGAATTTTCTTTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
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| 3UTR TCA 90 bp | CCTTCCTGGAAGGCTGGCATAGGGCAGCGAATTACTCACCCACAGTaGGTGTTCAAGATATTTTGCATTAAAATGACATTTCATTGGACA | + |
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Preference number: 1 (lower is better) Translates to: PSWKAGIGQRITHPQ*VFKIFCIKMTFHWT Trigger: TGTCCAATGAAATGTCATTTTAATGCAAAATATCTTGAACACTCACTGTGGGTGAGTAATTCGCTGCCCTATGCCAGCCTTCCAGGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
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| 3UTR TCA 90 bp | ATCCCATGTCTGCCGAGCAGATCCGTTCAGTTCACTGGTGATGGATaGAGTATTTACACGCATCTATTTACAGTACTTTGTCAAGATTAC | + |
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Preference number: 1 (lower is better) Translates to: IPCLPSRSVQFTGDG*SIYTHLFTVLCQDY Trigger: GTAATCTTGACAAAGTACTGTAAATAGATGCGTGTAAATACTTCATCCATCACCAGTGAACTGAACGGATCTGCTCGGCAGACATGGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132404.8 |
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| 3UTR GCA 90 bp | TCAAGTCCATTAGATACCATATCATATATACATAGAGAACAGGTATaGATAGTAAACATGTACATATGCAGAGCACACGGAAGCAGAGTA | + |
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Preference number: 1 (lower is better) Translates to: SSPLDTISYIHREQV*IVNMYICRAHGSRV Trigger: TACTCTGCTTCCGTGTGCTCTGCATATGTACATGTTTACTATGCATACCTGTTCTCTATGTATATATGATATGGTATCTAATGGACTTGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
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| 3UTR-3UTR TCA 90 bp | AGCTGCCTCCCAGCCAAAAGAGGGCCGGGCCGACCCAGAAACCTCAACCCCGAAGATGGCAGGCGGCTCTaGTGCTCCCTGCTGCTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: SCLPAKRGPGRPRNLNPEDGRRL*CSLLLR Trigger: TCTCAGCAGCAGGGAGCATCAGAGCCGCCTGCCATC...TTCGGGGTTGAGGTTTCTGGGTCGGCCCGGCCCTCTTTTGGCTGGGAGGCAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
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| 3UTR-3UTR TCA 90 bp | AGCTGCCTCCCAGCCAAAAGAGGGCCGGGCCGACCCAGAAACCTCAACCCCGAAGCCTTCCTCACTGAATaGACAAACCTTGCTCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: SCLPAKRGPGRPRNLNPEAFLTE*TNLAQA Trigger: AGCCTGAGCAAGGTTTGTTCATTCAGTGAGGAAGGC...TTCGGGGTTGAGGTTTCTGGGTCGGCCCGGCCCTCTTTTGGCTGGGAGGCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
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| 3UTR-3UTR CCA 90 bp | CTCAGAGAATGTCTCCAGATACACGTAAGCCCCTGGGCTTATCTTCGACAGCCTAACCTCCACAGCAGGTaGGGAAGGCAGTTCACTGGA | + |
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Preference number: 2 (lower is better) Translates to: LRECLQIHVSPWAYLRQPNLHSR*GRQFTG Trigger: TCCAGTGAACTGCCTTCCCCACCTGCTGTGGAGGTT...AGGCTGTCGAAGATAAGCCCAGGGGCTTACGTGTATCTGGAGACATTCTCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
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| 3UTR CAA 90 bp | GCCACCTGGGAAACACTATGCATAAGCTTGCAGTACCGTTTACACTaGGGAAAGTTACAGGAAGGGGCGTGGCAGAGATACACAGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: ATWETLCISLQYRLH*GKLQEGAWQRYTEP Trigger: GGGCTCTGTGTATCTCTGCCACGCCCCTTCCTGTAACTTTCCCAAGTGTAAACGGTACTGCAAGCTTATGCATAGTGTTTCCCAGGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
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| 3UTR-3UTR TCA 90 bp | CTGCTGAGAAACAGCAATCTCAACAGGCCATCCCTACGTGCTTACCAGGAATTCGGCTGGGAGGGATTCTaGGTTCTGTGGGAGTTCACA | + |
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Preference number: 2 (lower is better) Translates to: LLRNSNLNRPSLRAYQEFGWEGF*VLWEFT Trigger: TGTGAACTCCCACAGAACTCAGAATCCCTCCCAGCC...GAATTCCTGGTAAGCACGTAGGGATGGCCTGTTGAGATTGCTGTTTCTCAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
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| 3UTR-3UTR GCA 90 bp | GAAATAGTCACTTGGCTAATGTCATATCCCCATGGCAGGAAAAGAACGCCTGTGGCTCCCCTAACGGGGTaGTGGAATTGGTTCTCCGTG | + |
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Preference number: 2 (lower is better) Translates to: EIVTWLMSYPHGRKRTPVAPLTG*WNWFSV Trigger: CACGGAGAACCAATTCCAGCACCCCGTTAGGGGAGC...CACAGGCGTTCTTTTCCTGCCATGGGGATATGACATTAGCCAAGTGACTATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000145858.8 |
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| 3UTR-3UTR CCA 90 bp | CAGATGTACACCTCTCTCCCAATGCCTCAGGAGTGGGCAAGTGGCATATTAGCAAACTGTACCCTGTTCTaGAGTCACTGGCATCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: QMYTSLPMPQEWASGILANCTLF*SHWHLW Trigger: CCAGAGATGCCAGTGACTCCAGAACAGGGTACAGTT...TGCTAATATGCCACTTGCCCACTCCTGAGGCATTGGGAGAGAGGTGTACATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
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| 3UTR-3UTR CCA 90 bp | AGGTTCATACCAGGCCTCAACTCCCACAACCGCAGTCACTATGTAGACAAAAGACCCCTAACGGGGTGCTaGAATTGGTTCTCCGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: RFIPGLNSHNRSHYVDKRPLTGC*NWFSVL Trigger: AAGCACGGAGAACCAATTCCAGCACCCCGTTAGGGG...TCTTTTGTCTACATAGTGACTGCGGTTGTGGGAGTTGAGGCCTGGTATGAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000145858.8 |
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| 3UTR-3UTR TCA 90 bp | CAGATGTACACCTCTCTCCCAATGCCTCAGGAGTGGGCAAGTGGCATATTAGCACATGCTGTGGCTATCTaGATGTCATTAGTGTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: QMYTSLPMPQEWASGILAHAVAI*MSLVFL Trigger: CAGGAACACTAATGACATTCAGATAGCCACAGCATG...TGCTAATATGCCACTTGCCCACTCCTGAGGCATTGGGAGAGAGGTGTACATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
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| 3UTR-3UTR GCA 90 bp | ACAACCGGCTCACCTTCCAGCCTCCATGATGGCAATTTATTAACAAGCACAGAAAAGTCGGGCACCGCGTaGTGCTCATTTGGCAAACAA | + |
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Preference number: 2 (lower is better) Translates to: TTGSPSSLHDGNLLTSTEKSGTA*CSFGKQ Trigger: TTGTTTGCCAAATGAGCAGCACGCGGTGCCCGACTT...TTCTGTGCTTGTTAATAAATTGCCATCATGGAGGCTGGAAGGTGAGCCGGTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132404.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGGCCTCACTACCATCTCTGATTTCCGTTTTAGTGCTGCTGAAAGGGCAGCGCTGCCTGTGAAAGGCTaGAAATGTCAAAATTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: LGLTTISDFRFSAAERAALPVKG*KCQNSF Trigger: GAAGGAATTTTGACATTTGCAGCCTTTCACAGGCAG...CGCTGCCCTTTCAGCAGCACTAAAACGGAAATCAGAGATGGTAGTGAGGCCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
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| 3UTR-3UTR GCA 90 bp | TGGCTAATGTCATATCCCCATGGCAGGAAAAGAACGCCTGTGTTATACTTCTCCGGAATTGGTTCTCCGTaGTTGCTTTCCATCCACTCC | + |
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Preference number: 2 (lower is better) Translates to: WLMSYPHGRKRTPVLYFSGIGSP*LLSIHS Trigger: GGAGTGGATGGAAAGCAAGCACGGAGAACCAATTCC...GGAGAAGTATAACACAGGCGTTCTTTTCCTGCCATGGGGATATGACATTAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145858.8 |
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| 3UTR CAA 90 bp | AGCTTAGCCAACGTGATAGAAAAGACCCATAGCACTGGACAGTCCTaGGCCTCACTACCATCTCTGATTTCCGTTTTAGTGCTGCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: SLANVIEKTHSTGQS*ASLPSLISVLVLLK Trigger: TTTCAGCAGCACTAAAACGGAAATCAGAGATGGTAGTGAGGCCAAGGACTGTCCAGTGCTATGGGTCTTTTCTATCACGTTGGCTAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
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| 3UTR-3UTR GCA 90 bp | GACATGATTTTTCAGTCTACTGTACAAGGTGAAGAAAGCCTGTGGTCCAAATTCCAACTGGACAGACAGTaGCAGGGTGCTAACTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: DMIFQSTVQGEESLWSKFQLDRQ*QGANCG Trigger: GCCACAGTTAGCACCCTGGCACTGTCTGTCCAGTTG...GAATTTGGACCACAGGCTTTCTTCACCTTGTACAGTAGACTGAAAAATCATGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
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| 3UTR-3UTR GCA 90 bp | AATCCGGTGACAAGAACACAGACAATGCAAAACCCACATTCAAACTACCGAGAACCCGAGGTCACTGCCTaGTGTGATGTCAGCCATTTA | + |
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Preference number: 2 (lower is better) Translates to: NPVTRTQTMQNPHSNYREPEVTA*CDVSHL Trigger: TAAATGGCTGACATCACAGCAGGCAGTGACCTCGGG...TTCTCGGTAGTTTGAATGTGGGTTTTGCATTGTCTGTGTTCTTGTCACCGGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
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| 3UTR-3UTR CCA 90 bp | ACAACCGGCTCACCTTCCAGCCTCCATGATGGCAATTTATTAACAAGCACAGAAAGAAGAAGGGGACCATaGCTTCATAGACGGACTTGT | + |
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Preference number: 2 (lower is better) Translates to: TTGSPSSLHDGNLLTSTERRRGP*LHRRTC Trigger: ACAAGTCCGTCTATGAAGCCATGGTCCCCTTCTTCT...TTCTGTGCTTGTTAATAAATTGCCATCATGGAGGCTGGAAGGTGAGCCGGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132404.8 |
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| 3UTR CAA 90 bp | CCTCTCACGAGCTACTGCATATCCTCACAAGTAAGTACCACAAGATaGGGACTGTCACACGTATTCTTAAAAATCACAGCTCACAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: PLTSYCISSQVSTTR*GLSHVFLKITAHRH Trigger: GTGCCTGTGAGCTGTGATTTTTAAGAATACGTGTGACAGTCCCAATCTTGTGGTACTTACTTGTGAGGATATGCAGTAGCTCGTGAGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
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| 3UTR CAA 90 bp | GGACAAAGAAAATTCTGGTCTGTCGTCACAGTTCCTAAAGAGGGCTaGATCAAATCCAGAAGTAATGATGAGAGCATCCCAAACACGCGC | + |
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Preference number: 2 (lower is better) Translates to: GQRKFWSVVTVPKEG*IKSRSNDESIPNTR Trigger: GCGCGTGTTTGGGATGCTCTCATCATTACTTCTGGATTTGATCAAGCCCTCTTTAGGAACTGTGACGACAGACCAGAATTTTCTTTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
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| 3UTR-3UTR CCA 90 bp | CTTGGCCTCACTACCATCTCTGATTTCCGTTTTAGTGCTGCTGAAAGGGCAGCGCTAGGAACATTTAGCTaGTTTAATGTACACTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: LGLTTISDFRFSAAERAALGTFS*FNVHCA Trigger: AGCACAGTGTACATTAAACCAGCTAAATGTTCCTAG...CGCTGCCCTTTCAGCAGCACTAAAACGGAAATCAGAGATGGTAGTGAGGCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
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| 3UTR-3UTR TCA 90 bp | CTGCTGAGAAACAGCAATCTCAACAGGCCATCCCTACGTGCTTACCAGGAATTCCTTTCATACCTACTCTaGCTACAATATACTCCCTTA | + |
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Preference number: 2 (lower is better) Translates to: LLRNSNLNRPSLRAYQEFLSYLL*LQYTPL Trigger: TAAGGGAGTATATTGTAGTCAGAGTAGGTATGAAAG...GAATTCCTGGTAAGCACGTAGGGATGGCCTGTTGAGATTGCTGTTTCTCAGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
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| 3UTR-3UTR CCA 90 bp | ATACCAGGCCTCAACTCCCACAACCGCAGTCACTATGTAGACAAAAGAAATAGTGTCCTCGTCCAAAGATaGAGTACACAGTCACAACAA | + |
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Preference number: 2 (lower is better) Translates to: IPGLNSHNRSHYVDKRNSVLVQR*STQSQQ Trigger: TTGTTGTGACTGTGTACTCCATCTTTGGACGAGGAC...ACTATTTCTTTTGTCTACATAGTGACTGCGGTTGTGGGAGTTGAGGCCTGGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145858.8 |
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| 3UTR-3UTR TCA 90 bp | TACCACAAGATTGGGACTGTCACACGTATTCTTAAAAATCACAGCTCACAGGCAACACTGTACACAAAGTaGAGAGCAAACACGGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: YHKIGTVTRILKNHSSQATLYTK*RANTER Trigger: TCTCTCCGTGTTTGCTCTTCACTTTGTGTACAGTGT...TGCCTGTGAGCTGTGATTTTTAAGAATACGTGTGACAGTCCCAATCTTGTGGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132404.8 |
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| 3UTR-3UTR TCA 90 bp | TACCACAAGATTGGGACTGTCACACGTATTCTTAAAAATCACAGCTCACAGGCACTCAACCCGGGGACCTaGAACATGAAAGTAAATCAT | + |
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Preference number: 2 (lower is better) Translates to: YHKIGTVTRILKNHSSQALNPGT*NMKVNH Trigger: ATGATTTACTTTCATGTTTCAGGTCCCCGGGTTGAG...TGCCTGTGAGCTGTGATTTTTAAGAATACGTGTGACAGTCCCAATCTTGTGGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
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| 3UTR-3UTR TCA 90 bp | GGGAGATTTTGTTGTTTAACTGAAATTCTGAGTTCAGTGCTGAATTCTGCTTTCCTAGCAATGCACTGCTaGGAGAGGAACCGCCACAAT | + |
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Preference number: 2 (lower is better) Translates to: GRFCCLTEILSSVLNSAFLAMHC*ERNRHN Trigger: ATTGTGGCGGTTCCTCTCTCAGCAGTGCATTGCTAG...GAAAGCAGAATTCAGCACTGAACTCAGAATTTCAGTTAAACAACAAAATCTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
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| 3UTR-3UTR TCA 90 bp | GGGAGATTTTGTTGTTTAACTGAAATTCTGAGTTCAGTGCTGAATTCTGCTTTCCCCAGCCTTCCTCACTaGATGAACAAACCTTGCTCA | + |
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Preference number: 2 (lower is better) Translates to: GRFCCLTEILSSVLNSAFPSLPH*MNKPCS Trigger: TGAGCAAGGTTTGTTCATTCAGTGAGGAAGGCTGGG...GAAAGCAGAATTCAGCACTGAACTCAGAATTTCAGTTAAACAACAAAATCTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR-3UTR TCA 90 bp | GTTCATACCAGGCCTCAACTCCCACAACCGCAGTCACTATGTAGACAAAAGAAATTATACTTCTCCCAGTaGGACAGGATAAAAGAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: VHTRPQLPQPQSLCRQKKLYFSQ*DRIKEN Trigger: GTTTTCTTTTATCCTGTCTCACTGGGAGAAGTATAA...TTTCTTTTGTCTACATAGTGACTGCGGTTGTGGGAGTTGAGGCCTGGTATGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000145858.8 |
||
| 3UTR-3UTR GCA 90 bp | AATCCGGTGACAAGAACACAGACAATGCAAAACCCACATTCAAACTACCGAGAATGTTTCTGTCCTAACTaGTTGCTCAGTGACAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: NPVTRTQTMQNPHSNYRECFCPN*LLSDRK Trigger: TTTCCTGTCACTGAGCAAGCAGTTAGGACAGAAACA...TTCTCGGTAGTTTGAATGTGGGTTTTGCATTGTCTGTGTTCTTGTCACCGGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR-3UTR TCA 90 bp | AATCCGGTGACAAGAACACAGACAATGCAAAACCCACATTCAAACTACCGAGAAATTACTCACCCACAGTaGGTGTTCAAGATATTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: NPVTRTQTMQNPHSNYREITHPQ*VFKIFC Trigger: GCAAAATATCTTGAACACTCACTGTGGGTGAGTAAT...TTCTCGGTAGTTTGAATGTGGGTTTTGCATTGTCTGTGTTCTTGTCACCGGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR-3UTR GCA 90 bp | GAATTTAATTACATATCAACACAGTGGTGCCTATTTTATCCAAGTGCAACCTGTTCGGGCACCGCGTGCTaGTCATTTGGCAAACAATTA | + |
|
Preference number: 2 (lower is better) Translates to: EFNYISTQWCLFYPSATCSGTAC*SFGKQL Trigger: TAATTGTTTGCCAAATGAGCAGCACGCGGTGCCCGA...ACAGGTTGCACTTGGATAAAATAGGCACCACTGTGTTGATATGTAATTAAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132404.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAAGATTGGGACTGTCACACGTATTCTTAAAAATCACAGCTCACAGGCACCCACTAGGAACATTTAGCTaGTTTAATGTACACTGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: TRLGLSHVFLKITAHRHPLGTFS*FNVHCA Trigger: AGCACAGTGTACATTAAACCAGCTAAATGTTCCTAG...TGGGTGCCTGTGAGCTGTGATTTTTAAGAATACGTGTGACAGTCCCAATCTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
||
| 3UTR-3UTR TCA 90 bp | GACATGATTTTTCAGTCTACTGTACAAGGTGAAGAAAGCCTGTGGTCCAAATTCTTCACTGGTGATGGATaGAGTATTTACACGCATCTA | + |
|
Preference number: 2 (lower is better) Translates to: DMIFQSTVQGEESLWSKFFTGDG*SIYTHL Trigger: TAGATGCGTGTAAATACTTCATCCATCACCAGTGAA...GAATTTGGACCACAGGCTTTCTTCACCTTGTACAGTAGACTGAAAAATCATGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
||
| 3UTR-3UTR TCA 90 bp | AGCGTCCTCTGCCATTCAACAGTGACAACAGAACTAGAAACACATTTCTTTACTTTCACTGGTGATGGATaGAGTATTTACACGCATCTA | + |
|
Preference number: 2 (lower is better) Translates to: SVLCHSTVTTELETHFFTFTGDG*SIYTHL Trigger: TAGATGCGTGTAAATACTTCATCCATCACCAGTGAA...AGTAAAGAAATGTGTTTCTAGTTCTGTTGTCACTGTTGAATGGCAGAGGACGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR-3UTR TCA 90 bp | AGCGTCCTCTGCCATTCAACAGTGACAACAGAACTAGAAACACATTTCTTTACTTCATCTTTAACTTTGTaGGTCAAAACGCCATGGACT | + |
|
Preference number: 2 (lower is better) Translates to: SVLCHSTVTTELETHFFTSSLTL*VKTPWT Trigger: AGTCCATGGCGTTTTGACTCACAAAGTTAAAGATGA...AGTAAAGAAATGTGTTTCTAGTTCTGTTGTCACTGTTGAATGGCAGAGGACGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR-3UTR GCA 90 bp | GAATTTAATTACATATCAACACAGTGGTGCCTATTTTATCCAAGTGCAACCTGTCCCAGGTTTCATTCTTaGTGTCCATATAGCACACAC | + |
|
Preference number: 2 (lower is better) Translates to: EFNYISTQWCLFYPSATCPRFHS*CPYSTH Trigger: GTGTGTGCTATATGGACAGCAAGAATGAAACCTGGG...ACAGGTTGCACTTGGATAAAATAGGCACCACTGTGTTGATATGTAATTAAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
||
| 3UTR-3UTR CCA 90 bp | AATCCGGTGACAAGAACACAGACAATGCAAAACCCACATTCAAACTACCGAGAATACATATCAACACAGTaGTGCCTATTTTATCCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: NPVTRTQTMQNPHSNYREYISTQ*CLFYPS Trigger: ACTTGGATAAAATAGGCACCACTGTGTTGATATGTA...TTCTCGGTAGTTTGAATGTGGGTTTTGCATTGTCTGTGTTCTTGTCACCGGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR GCA 72 bp | TGTGTAAAGGAGGGCGCTCTCAAGGCGGGAGGTGGCTaGACCTACGATCACCGCTGCCACAACCAAGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: CVKEGALKAGGG*TYDHRCHNQEE Trigger: CTCCTCTTGGTTGTGGCAGCGGTGATCGTAGGTGCAGCCACCTCCCGCCTTGAGAGCGCCCTCCTTTACACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132404.8 |
||
| 3UTR TCA 72 bp | TACAGGAAGGGGCGTGGCAGAGATACACAGAGCCCCTaGCAATCAAGCCCGCATCCGCCGCTGTATCGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: YRKGRGRDTQSP*QSSPHPPLYRY Trigger: GTAGCGATACAGCGGCGGATGCGGGCTTGATTGTCAGGGGCTCTGTGTATCTCTGCCACGCCCCTTCCTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR GCA 72 bp | GCCGCTGTATCGCTACAACATATGGGCATCTCGCGATaGACAACCATGACGGAGGGCATGAGCAGGCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: AAVSLQHMGISR*TTMTEGMSRLG Trigger: TCCCAGCCTGCTCATGCCCTCCGTCATGGTTGTGCATCGCGAGATGCCCATATGTTGTAGCGATACAGCGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR CCA 72 bp | GGACAACCTCCACAGCAGGTGGGGAAGGCAGTTCACTaGAGGGCAACCGGGATTTGGCAACTGTACCCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: GQPPQQVGKAVH*RATGIWQLYPV Trigger: AACAGGGTACAGTTGCCAAATCCCGGTTGCCCTCCAGTGAACTGCCTTCCCCACCTGCTGTGGAGGTTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
||
| 3UTR CCA 72 bp | CCCTGGAGGGGAAAGGTGGGGAAGTGGCTTTCCATGTaGGCCATGGGCACGCCAAATCCACACAAAGCAACA | + |
|
Preference number: 3 (lower is better) Translates to: PWRGKVGKWLSM*AMGTPNPHKAT Trigger: TGTTGCTTTGTGTGGATTTGGCGTGCCCATGGCCCACATGGAAAGCCACTTCCCCACCTTTCCCCTCCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR GCA 72 bp | AGGGAGAAGGAAAGCAAGCAGCAACTGGACAGACAGTaGCAGGGTGCTAACTGTGGCCGATGTGGAGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: REKESKQQLDRQ*QGANCGRCGAL Trigger: CAGAGCTCCACATCGGCCACAGTTAGCACCCTGGCACTGTCTGTCCAGTTGCTGCTTGCTTTCCTTCTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
||
| 3UTR GCA 72 bp | AAACTTGCACCTGGCCAGGGCCAAGTACAGAAGGCATaGGTGTGCACTTCCAACCGCGATGCTGCTTCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: KLAPGQGQVQKA*VCTSNRDAASQ Trigger: TTGGGAAGCAGCATCGCGGTTGGAAGTGCACACGCATGCCTTCTGTACTTGGCCCTGGCCAGGTGCAAGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR CCA 72 bp | GTGGGGAAGGCAGTTCACTGGAGGGCAACCGGGATTTaGCAACTGTACCCTGTTCTGGAGTCACTGGCATCT | + |
|
Preference number: 3 (lower is better) Translates to: VGKAVHWRATGI*QLYPVLESLAS Trigger: AGATGCCAGTGACTCCAGAACAGGGTACAGTTGCCAAATCCCGGTTGCCCTCCAGTGAACTGCCTTCCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCTGCCTCCCAGCCAAAAGAGGGCCGGGCCGACCCAGAAACCTCAACCCCGAATTTCTGCATTACATTTaGGCTGTGGGAATGATCCAC | + |
|
Preference number: 3 (lower is better) Translates to: SCLPAKRGPGRPRNLNPEFLHYI*AVGMIH Trigger: GTGGATCATTCCCACAGCCAAAATGTAATGCAGAAA...TTCGGGGTTGAGGTTTCTGGGTCGGCCCGGCCCTCTTTTGGCTGGGAGGCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR GCA 72 bp | ATTCTGAGACTCTGTGTGCTCCCTTCCACTTCCCCCTaGCAGCAGCGTCCTCTGCCATTCAACAGTGACAAC | + |
|
Preference number: 3 (lower is better) Translates to: ILRLCVLPSTSP*QQRPLPFNSDN Trigger: GTTGTCACTGTTGAATGGCAGAGGACGCTGCTGGCAGGGGGAAGTGGAAGGGAGCACACAGAGTCTCAGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR GCA 72 bp | CCCAAACACGCGCATCCCCACAGCCAACTCCATCTCTaGATCTGTTTCTGGCTAATTTGGAGACCCAGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: PKHAHPHSQLHL*ICFWLIWRPRV Trigger: GACTCTGGGTCTCCAAATTAGCCAGAAACAGATGCAGAGATGGAGTTGGCTGTGGGGATGCGCGTGTTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR GCA 72 bp | AGATCAAGTATCTCCCAGATGGAGTTCATAGCACACTaGTCCCAAAGCTGCCTCCCAGCCAAAAGAGGGCCG | + |
|
Preference number: 3 (lower is better) Translates to: RSSISQMEFIAH*SQSCLPAKRGP Trigger: CGGCCCTCTTTTGGCTGGGAGGCAGCTTTGGGAGCAGTGTGCTATGAACTCCATCTGGGAGATACTTGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR CCA 72 bp | GGGGAAAGGTGGGGAAGTGGCTTTCCATGTGGGCCATaGGCACGCCAAATCCACACAAAGCAACAGACTAAT | + |
|
Preference number: 3 (lower is better) Translates to: GERWGSGFPCGP*ARQIHTKQQTN Trigger: ATTAGTCTGTTGCTTTGTGTGGATTTGGCGTGCCCATGGCCCACATGGAAAGCCACTTCCCCACCTTTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR GCA 72 bp | TGCTCCCTTCCACTTCCCCCTGCCAGCAGCGTCCTCTaGCATTCAACAGTGACAACAGAACTAGAAACACAT | + |
|
Preference number: 3 (lower is better) Translates to: CSLPLPPASSVL*HSTVTTELETH Trigger: ATGTGTTTCTAGTTCTGTTGTCACTGTTGAATGGCAGAGGACGCTGCTGGCAGGGGGAAGTGGAAGGGAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR CCA 72 bp | TACCGTTTACACTTGGGAAAGTTACAGGAAGGGGCGTaGCAGAGATACACAGAGCCCCTGACAATCAAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: YRLHLGKLQEGA*QRYTEPLTIKP Trigger: GGGCTTGATTGTCAGGGGCTCTGTGTATCTCTGCCACGCCCCTTCCTGTAACTTTCCCAAGTGTAAACGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR CCA 72 bp | GCGATGCTGCTTCCCAAAGGGCAACTCCGTGCCACCTaGGAAACACTATGCATAAGCTTGCAGTACCGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: AMLLPKGQLRAT*ETLCISLQYRL Trigger: TAAACGGTACTGCAAGCTTATGCATAGTGTTTCCCAGGTGGCACGGAGTTGCCCTTTGGGAAGCAGCATCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR TCA 72 bp | CCTTCACCAACCAAGAGATTTAAGGCATTCACCACATaGATCTGTCTGCAAGCCAGCCGGGATGCAGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: PSPTKRFKAFTT*ICLQASRDAES Trigger: GCTCTCTGCATCCCGGCTGGCTTGCAGACAGATTCATGTGGTGAATGCCTTAAATCTCTTGGTTGGTGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR CCA 72 bp | CAGTTACCACCGTTAGGCAGGAAGGGAGAGGAAACCTaGGTTCCTGAGTACCTTGGCCATTATTGTCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: QLPPLGRKGEET*VPEYLGHYCLP Trigger: TGGAAGACAATAATGGCCAAGGTACTCAGGAACCCAGGTTTCCTCTCCCTTCCTGCCTAACGGTGGTAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR TCA 72 bp | GTCTTTCTGGCTCGAAGTCCCCTGGTGAAAGGGAAGTaGAATATCATCTACTGTGAGGGCTTTCTCAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: VFLARSPLVKGK*NIIYCEGFLRA Trigger: AGCCCTGAGAAAGCCCTCACAGTAGATGATATTTCACTTCCCTTTCACCAGGGGACTTCGAGCCAGAAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR-3UTR CAA 90 bp | TCGTTCGTTATCCTGTGTGAGAATAAAAACCACAACAGCTCACCCCCAGGGAGACAGCTGCTTCACCACTaGTACGCCATAATGGATGTG | + |
|
Preference number: 3 (lower is better) Translates to: SFVILCENKNHNSSPPGRQLLHH*YAIMDV Trigger: CACATCCATTATGGCGTACAAGTGGTGAAGCAGCTG...TCTCCCTGGGGGTGAGCTGTTGTGGTTTTTATTCTCACACAGGATAACGAACGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000132404.8 |
||
| 3UTR TCA 72 bp | GGGCACCGCGTGCTGCTCATTTGGCAAACAATTAGCTaGCATGTGATATTGGCAAAAGCTGTTCCAACCATG | + |
|
Preference number: 3 (lower is better) Translates to: GHRVLLIWQTIS*HVILAKAVPTM Trigger: CATGGTTGGAACAGCTTTTGCCAATATCACATGTCAGCTAATTGTTTGCCAAATGAGCAGCACGCGGTGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132404.8 |
||
| 3UTR TCA 72 bp | TTTCCTGACAAGCTTGAAAAGGGCTTTTCCACAGCCTaGAAAGAAACTTGCACCTGGCCAGGGCCAAGTACA | + |
|
Preference number: 3 (lower is better) Translates to: FPDKLEKGFSTA*KETCTWPGPST Trigger: TGTACTTGGCCCTGGCCAGGTGCAAGTTTCTTTTCAGGCTGTGGAAAAGCCCTTTTCAAGCTTGTCAGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR GCA 72 bp | GCTGAGAAACAGCAATCTCAACAGGCCATCCCTACGTaGTTACCAGGAATTCTGTTACCCAGAGAAACTGCT | + |
|
Preference number: 3 (lower is better) Translates to: AEKQQSQQAIPT*LPGILLPRETA Trigger: AGCAGTTTCTCTGGGTAACAGAATTCCTGGTAAGCACGTAGGGATGGCCTGTTGAGATTGCTGTTTCTCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR GCA 72 bp | GCAACACTCCAGAAAAGTGAAGCAAGGGCAAAGCTCTaGTCCAGCAAGATCAAGTATCTCCCAGATGGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: ATLQKSEARAKL*SSKIKYLPDGV Trigger: AACTCCATCTGGGAGATACTTGATCTTGCTGGAGCAGAGCTTTGCCCTTGCTTCACTTTTCTGGAGTGTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGCCTCACTACCATCTCTGATTTCCGTTTTAGTGCTGCTGAAAGGGCAGCGGTTCCTAAAGAGGGCTaGATCAAATCCAGAAGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: LGLTTISDFRFSAAERAAVPKEG*IKSRSN Trigger: ATTACTTCTGGATTTGATCAAGCCCTCTTTAGGAAC...CGCTGCCCTTTCAGCAGCACTAAAACGGAAATCAGAGATGGTAGTGAGGCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR TCA 72 bp | CAAATGACCAGTTTATTCCTCCATAGATCATGGAGCTaGGGTCGGCTTCAGGAAGCAAGGTGCCTTTCATAC | + |
|
Preference number: 3 (lower is better) Translates to: QMTSLFLHRSWS*GRLQEARCLSY Trigger: GTATGAAAGGCACCTTGCTTCCTGAAGCCGACCTCAGCTCCATGATCTATGGAGGAATAAACTGGTCATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR GCA 72 bp | GCCGGGATGCAGAGAGCTGTTTCTGTCCTAACTGCTTaGTCAGTGACAGGAAAAGTTACAAGTAGGTTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: AGMQRAVSVLTA*SVTGKVTSRFQ Trigger: TTGAAACCTACTTGTAACTTTTCCTGTCACTGAGCAAGCAGTTAGGACAGAAACAGCTCTCTGCATCCCGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR-3UTR CAA 90 bp | TCGTTCGTTATCCTGTGTGAGAATAAAAACCACAACAGCTCACCCCCAGGGAGATTTCTGCATTACATTTaGGCTGTGGGAATGATCCAC | + |
|
Preference number: 3 (lower is better) Translates to: SFVILCENKNHNSSPPGRFLHYI*AVGMIH Trigger: GTGGATCATTCCCACAGCCAAAATGTAATGCAGAAA...TCTCCCTGGGGGTGAGCTGTTGTGGTTTTTATTCTCACACAGGATAACGAACGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
||
| 3UTR-3UTR CAA 90 bp | AATCCGGTGACAAGAACACAGACAATGCAAAACCCACATTCAAACTACCGAGAATACACAACTGAGTCTTaGTCTGGAGGATGGCTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: NPVTRTQTMQNPHSNYREYTTES*SGGWLL Trigger: GAGCAGCCATCCTCCAGACAAAGACTCAGTTGTGTA...TTCTCGGTAGTTTGAATGTGGGTTTTGCATTGTCTGTGTTCTTGTCACCGGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR TCA 72 bp | AAACTACCCATAGCAGGAGATAAAGAACAAAAACACTaGCGCCAGTCGGTCCTCGTCCAAAGATGGAGTACA | + |
|
Preference number: 3 (lower is better) Translates to: KLPIAGDKEQKH*RQSVLVQRWST Trigger: TGTACTCCATCTTTGGACGAGGACCGACTGGCGTCAGTGTTTTTGTTCTTTATCTCCTGCTATGGGTAGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145858.8 |
||
| 3UTR CCA 72 bp | TACATAATTAATAAAGGAAAAGCCTTCCTGGAAGGCTaGCATAGGGCAGCGAATTACTCACCCACAGTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: YIINKGKAFLEG*HRAANYSPTVS Trigger: ACTCACTGTGGGTGAGTAATTCGCTGCCCTATGCCAGCCTTCCAGGAAGGCTTTTCCTTTATTAATTATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR-3UTR CAA 90 bp | TCGTTCGTTATCCTGTGTGAGAATAAAAACCACAACAGCTCACCCCCAGGGAGACTAGTCAATCTGAGTTaGGTTTCCTCAATGAAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SFVILCENKNHNSSPPGRLVNLS*VSSMKK Trigger: CTTTTTCATTGAGGAAACCAAACTCAGATTGACTAG...TCTCCCTGGGGGTGAGCTGTTGTGGTTTTTATTCTCACACAGGATAACGAACGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000132404.8 |
||
| 3UTR TCA 72 bp | CTGCCGAGCAGATCCGTTCAGTTCACTGGTGATGGATaGAGTATTTACACGCATCTATTTACAGTACTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LPSRSVQFTGDG*SIYTHLFTVLC Trigger: ACAAAGTACTGTAAATAGATGCGTGTAAATACTTCATCCATCACCAGTGAACTGAACGGATCTGCTCGGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
||
| 3UTR TCA 72 bp | ATAACGTATCAAATATTAAGACATGCTGTGGCTATCTaGATGTCATTAGTGTTCCTGACTCAACCCGGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: ITYQILRHAVAI*MSLVFLTQPGD Trigger: GTCCCCGGGTTGAGTCAGGAACACTAATGACATTCAGATAGCCACAGCATGTCTTAATATTTGATACGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
||
| 3UTR TCA 72 bp | CGGCTTCAGGAAGCAAGGTGCCTTTCATACCTACTCTaGCTACAATATACTCCCTTAATGTATTTAGCATGT | + |
|
Preference number: 3 (lower is better) Translates to: RLQEARCLSYLL*LQYTPLMYLAC Trigger: ACATGCTAAATACATTAAGGGAGTATATTGTAGTCAGAGTAGGTATGAAAGGCACCTTGCTTCCTGAAGCCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR GCA 72 bp | TACGTGCTTACCAGGAATTCTGTTACCCAGAGAAACTaGTTAAAAGAGCTTAGCCAACGTGATAGAAAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: YVLTRNSVTQRN*LKELSQRDRKD Trigger: GTCTTTTCTATCACGTTGGCTAAGCTCTTTTAAGCAGTTTCTCTGGGTAACAGAATTCCTGGTAAGCACGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR TCA 72 bp | GACCTGAAACATGAAAGTAAATCATCTTTAACTTTGTaGGTCAAAACGCCATGGACTCAGGAAGCTAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: DLKHESKSSLTL*VKTPWTQEARN Trigger: GTTCCTAGCTTCCTGAGTCCATGGCGTTTTGACTCACAAAGTTAAAGATGATTTACTTTCATGTTTCAGGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
||
| 3UTR GCA 72 bp | GCTGGCGTAGTCTCTCAGCAAAGCACACTACTAACATaGAGGTTAGAGAGTAAGTTACATTTAGTTTGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: AGVVSQQSTLLT*RLESKLHLVCK Trigger: TTTACAAACTAAATGTAACTTACTCTCTAACCTGCATGTTAGTAGTGTGCTTTGCTGAGAGACTACGCCAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| CDS-3UTR CCA 90 bp | AGCTGCCTCCCAGCCAAAAGAGGGCCGGGCCGACCCAGAAACCTCAACCCCGAACCCCTAACGGGGTGCTaGAATTGGTTCTCCGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SCLPAKRGPGRPRNLNPEPLTGC*NWFSVL Trigger: AAGCACGGAGAACCAATTCCAGCACCCCGTTAGGGG...TTCGGGGTTGAGGTTTCTGGGTCGGCCCGGCCCTCTTTTGGCTGGGAGGCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| CDS-3UTR TCA 90 bp | AGCTGCCTCCCAGCCAAAAGAGGGCCGGGCCGACCCAGAAACCTCAACCCCGAATGTAGGCAGCAAAGTTaGGGATGCCCACGACAATCC | + |
|
Preference number: 4 (lower is better) Translates to: SCLPAKRGPGRPRNLNPECRQQS*GCPRQS Trigger: GGATTGTCGTGGGCATCCTCAACTTTGCTGCCTACA...TTCGGGGTTGAGGTTTCTGGGTCGGCCCGGCCCTCTTTTGGCTGGGAGGCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| CDS-3UTR GCA 90 bp | AGCTGCCTCCCAGCCAAAAGAGGGCCGGGCCGACCCAGAAACCTCAACCCCGAAAAGTCGGGCACCGCGTaGTGCTCATTTGGCAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: SCLPAKRGPGRPRNLNPEKSGTA*CSFGKQ Trigger: TTGTTTGCCAAATGAGCAGCACGCGGTGCCCGACTT...TTCGGGGTTGAGGTTTCTGGGTCGGCCCGGCCCTCTTTTGGCTGGGAGGCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| CDS-3UTR TCA 90 bp | CAACCTCCACAGCAGGTGGGGAAGGCAGTTCACTGGAGGGCAACCGGGATTTGGCTTATGACCAGGGGCTaGAGCATAGAAGTCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QPPQQVGKAVHWRATGIWLMTRG*SIEVRV Trigger: GACCCTGACTTCTATGCTTCAGCCCCTGGTCATAAG...CCAAATCCCGGTTGCCCTCCAGTGAACTGCCTTCCCCACCTGCTGTGGAGGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR CAA 72 bp | GGTGGGGAAGGCAGTTCACTGGAGGGCAACCGGGATTaGGCAACTGTACCCTGTTCTGGAGTCACTGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: GGEGSSLEGNRD*ATVPCSGVTGI Trigger: GATGCCAGTGACTCCAGAACAGGGTACAGTTGCCAAATCCCGGTTGCCCTCCAGTGAACTGCCTTCCCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
||
| CDS-3UTR GCA 90 bp | GGGGAAAGGTGGGGAAGTGGCTTTCCATGTGGGCCATGGGCACGCCAAATCCACGGAATTGGTTCTCCGTaGTTGCTTTCCATCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GERWGSGFPCGPWARQIHGIGSP*LLSIHS Trigger: GGAGTGGATGGAAAGCAAGCACGGAGAACCAATTCC...GTGGATTTGGCGTGCCCATGGCCCACATGGAAAGCCACTTCCCCACCTTTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| CDS-3UTR CCA 90 bp | CTCAGAGAATGTCTCCAGATACACGTAAGCCCCTGGGCTTATCTTCGACAGCCTGCCCGACAGCTGCTCTaGGCTCACGTATTCGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LRECLQIHVSPWAYLRQPARQLL*AHVFVA Trigger: GGCTACGAATACGTGAGCCCAGAGCAGCTGTCGGGC...AGGCTGTCGAAGATAAGCCCAGGGGCTTACGTGTATCTGGAGACATTCTCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
||
| CDS-3UTR CCA 90 bp | CACAACAAAGTAAACACACGACCAACTGTCCAGGCCATGGTCAAACAGCTCCCCGCCCGACAGCTGCTCTaGGCTCACGTATTCGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HNKVNTRPTVQAMVKQLPARQLL*AHVFVA Trigger: GGCTACGAATACGTGAGCCCAGAGCAGCTGTCGGGC...GGGGAGCTGTTTGACCATGGCCTGGACAGTTGGTCGTGTGTTTACTTTGTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145858.8 |
||
| CDS-3UTR CCA 90 bp | GGGGAAAGGTGGGGAAGTGGCTTTCCATGTGGGCCATGGGCACGCCAAATCCACAGAAGAAGGGGACCATaGCTTCATAGACGGACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GERWGSGFPCGPWARQIHRRRGP*LHRRTC Trigger: ACAAGTCCGTCTATGAAGCCATGGTCCCCTTCTTCT...GTGGATTTGGCGTGCCCATGGCCCACATGGAAAGCCACTTCCCCACCTTTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| CDS-3UTR CCA 90 bp | GGGGAAAGGTGGGGAAGTGGCTTTCCATGTGGGCCATGGGCACGCCAAATCCACGTCCTCGTCCAAAGATaGAGTACACAGTCACAACAA | + |
|
Preference number: 4 (lower is better) Translates to: GERWGSGFPCGPWARQIHVLVQR*STQSQQ Trigger: TTGTTGTGACTGTGTACTCCATCTTTGGACGAGGAC...GTGGATTTGGCGTGCCCATGGCCCACATGGAAAGCCACTTCCCCACCTTTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| CDS-3UTR GCA 90 bp | AGCAGTAACCAGTTCAAAGTCGGGCACCGCGTGCTGCTCATTTGGCAAACAATTGCTCCCCTAACGGGGTaGTGGAATTGGTTCTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSNQFKVGHRVLLIWQTIAPLTG*WNWFSV Trigger: CACGGAGAACCAATTCCAGCACCCCGTTAGGGGAGC...AATTGTTTGCCAAATGAGCAGCACGCGGTGCCCGACTTTGAACTGGTTACTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132404.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTGAGAAACAGCAATCTCAACAGGCCATCCCTACGTGCTTACCAGGAATTCGCTCCCCTAACGGGGTaGTGGAATTGGTTCTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLRNSNLNRPSLRAYQEFAPLTG*WNWFSV Trigger: CACGGAGAACCAATTCCAGCACCCCGTTAGGGGAGC...GAATTCCTGGTAAGCACGTAGGGATGGCCTGTTGAGATTGCTGTTTCTCAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR CAA 72 bp | GCAGGAAGGGAGAGGAAACCTGGGTTCCTGAGTACCTaGGCCATTATTGTCTTCCACTCTGCCCAAAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGRERKPGFLST*AIIVFHSAQKW Trigger: CCACTTTTGGGCAGAGTGGAAGACAATAATGGCCAAGGTACTCAGGAACCCAGGTTTCCTCTCCCTTCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| CDS-3UTR TCA 90 bp | AAGAGGAGAGGAAGCAGTAACCAGTTCAAAGTCGGGCACCGCGTGCTGCTCATTAAAGAACAAAAACACTaGCGCCAGTCGGTCCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: KRRGSSNQFKVGHRVLLIKEQKH*RQSVLV Trigger: GACGAGGACCGACTGGCGTCAGTGTTTTTGTTCTTT...AATGAGCAGCACGCGGTGCCCGACTTTGAACTGGTTACTGCTTCCTCTCCTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132404.8 |
||
| CDS-3UTR CCA 90 bp | AAGTCCACAATTCCACAAGCTGAGCCCAGGTTTCATTCTTGCTGTCCATATAGCGCCCGACAGCTGCTCTaGGCTCACGTATTCGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KSTIPQAEPRFHSCCPYSARQLL*AHVFVA Trigger: GGCTACGAATACGTGAGCCCAGAGCAGCTGTCGGGC...GCTATATGGACAGCAAGAATGAAACCTGGGCTCAGCTTGTGGAATTGTGGACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
||
| CDS-3UTR TCA 90 bp | CAACCTCCACAGCAGGTGGGGAAGGCAGTTCACTGGAGGGCAACCGGGATTTGGTTATACTTCTCCCAGTaGGACAGGATAAAAGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QPPQQVGKAVHWRATGIWLYFSQ*DRIKEN Trigger: GTTTTCTTTTATCCTGTCTCACTGGGAGAAGTATAA...CCAAATCCCGGTTGCCCTCCAGTGAACTGCCTTCCCCACCTGCTGTGGAGGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
||
| CDS-3UTR GCA 90 bp | CTTGGCCTCACTACCATCTCTGATTTCCGTTTTAGTGCTGCTGAAAGGGCAGCGAAATGTCGGCTCAGCTaGTTCACCACTTGTACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGLTTISDFRFSAAERAAKCRLS*FTTCTP Trigger: TGGCGTACAAGTGGTGAAGCAGCTGAGCCGACATTT...CGCTGCCCTTTCAGCAGCACTAAAACGGAAATCAGAGATGGTAGTGAGGCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| CDS-3UTR CCA 90 bp | TCGTTCGTTATCCTGTGTGAGAATAAAAACCACAACAGCTCACCCCCAGGGAGACCCCTAACGGGGTGCTaGAATTGGTTCTCCGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SFVILCENKNHNSSPPGRPLTGC*NWFSVL Trigger: AAGCACGGAGAACCAATTCCAGCACCCCGTTAGGGG...TCTCCCTGGGGGTGAGCTGTTGTGGTTTTTATTCTCACACAGGATAACGAACGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
||
| CDS-3UTR TCA 90 bp | AAAATGTCGGCTCAGCTGCTTCACCACTTGTACGCCATAATGGATGTGAGCCAGTCCATCCACTCCATCTaGAGCATAGAAGTCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KMSAQLLHHLYAIMDVSQSIHSI*SIEVRV Trigger: GACCCTGACTTCTATGCTTCAGATGGAGTGGATGGA...CTGGCTCACATCCATTATGGCGTACAAGTGGTGAAGCAGCTGAGCCGACATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132404.8 |
||
| CDS-3UTR TCA 90 bp | CAGTCACAACAAAGTAAACACACGACCAACTGTCCAGGCCATGGTCAAACAGCTTGTAGGCAGCAAAGTTaGGGATGCCCACGACAATCC | + |
|
Preference number: 4 (lower is better) Translates to: QSQQSKHTTNCPGHGQTACRQQS*GCPRQS Trigger: GGATTGTCGTGGGCATCCTCAACTTTGCTGCCTACA...AGCTGTTTGACCATGGCCTGGACAGTTGGTCGTGTGTTTACTTTGTTGTGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145858.8 |
||
| CDS-3UTR GCA 90 bp | AAGTCCACAATTCCACAAGCTGAGCCCAGGTTTCATTCTTGCTGTCCATATAGCTCAAAGCCCGACAGCTaGTCTGGGCTCACGTATTCG | + |
|
Preference number: 4 (lower is better) Translates to: KSTIPQAEPRFHSCCPYSSKPDS*SGLTYS Trigger: CGAATACGTGAGCCCAGAGCAGCTGTCGGGCTTTGA...GCTATATGGACAGCAAGAATGAAACCTGGGCTCAGCTTGTGGAATTGTGGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
||
| CDS-3UTR GCA 90 bp | TGGCTAATGTCATATCCCCATGGCAGGAAAAGAACGCCTGTGTTATACTTCTCCTCAAAGCCCGACAGCTaGTCTGGGCTCACGTATTCG | + |
|
Preference number: 4 (lower is better) Translates to: WLMSYPHGRKRTPVLYFSSKPDS*SGLTYS Trigger: CGAATACGTGAGCCCAGAGCAGCTGTCGGGCTTTGA...GGAGAAGTATAACACAGGCGTTCTTTTCCTGCCATGGGGATATGACATTAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145858.8 |
||
| CDS-3UTR CCA 90 bp | TCGTTCGTTATCCTGTGTGAGAATAAAAACCACAACAGCTCACCCCCAGGGAGACAACTGTCCAGGCCATaGTCAAACAGCTCCCCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SFVILCENKNHNSSPPGRQLSRP*SNSSPN Trigger: GTTAGGGGAGCTGTTTGACCATGGCCTGGACAGTTG...TCTCCCTGGGGGTGAGCTGTTGTGGTTTTTATTCTCACACAGGATAACGAACGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
||
| CDS-3UTR CCA 90 bp | ACACAGAGCACAAGGTGGACGGAACAGTTATCCTCACACAACCGGCTCACCTTCGTCCTCGTCCAAAGATaGAGTACACAGTCACAACAA | + |
|
Preference number: 4 (lower is better) Translates to: TQSTRWTEQLSSHNRLTFVLVQR*STQSQQ Trigger: TTGTTGTGACTGTGTACTCCATCTTTGGACGAGGAC...GAAGGTGAGCCGGTTGTGTGAGGATAACTGTTCCGTCCACCTTGTGCTCTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
||
| CDS-3UTR TCA 90 bp | TCGTTCGTTATCCTGTGTGAGAATAAAAACCACAACAGCTCACCCCCAGGGAGAAAAGAACAAAAACACTaGCGCCAGTCGGTCCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: SFVILCENKNHNSSPPGRKEQKH*RQSVLV Trigger: GACGAGGACCGACTGGCGTCAGTGTTTTTGTTCTTT...TCTCCCTGGGGGTGAGCTGTTGTGGTTTTTATTCTCACACAGGATAACGAACGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
||
| CDS-3UTR GCA 90 bp | TCGTTCGTTATCCTGTGTGAGAATAAAAACCACAACAGCTCACCCCCAGGGAGATCGGGCACCGCGTGCTaGTCATTTGGCAAACAATTA | + |
|
Preference number: 4 (lower is better) Translates to: SFVILCENKNHNSSPPGRSGTAC*SFGKQL Trigger: TAATTGTTTGCCAAATGAGCAGCACGCGGTGCCCGA...TCTCCCTGGGGGTGAGCTGTTGTGGTTTTTATTCTCACACAGGATAACGAACGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| CDS-3UTR CCA 90 bp | AAGTCCACAATTCCACAAGCTGAGCCCAGGTTTCATTCTTGCTGTCCATATAGCCAACTGTCCAGGCCATaGTCAAACAGCTCCCCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: KSTIPQAEPRFHSCCPYSQLSRP*SNSSPN Trigger: GTTAGGGGAGCTGTTTGACCATGGCCTGGACAGTTG...GCTATATGGACAGCAAGAATGAAACCTGGGCTCAGCTTGTGGAATTGTGGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
||
| CDS-3UTR GCA 90 bp | AAGTCCACAATTCCACAAGCTGAGCCCAGGTTTCATTCTTGCTGTCCATATAGCGGAATTGGTTCTCCGTaGTTGCTTTCCATCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: KSTIPQAEPRFHSCCPYSGIGSP*LLSIHS Trigger: GGAGTGGATGGAAAGCAAGCACGGAGAACCAATTCC...GCTATATGGACAGCAAGAATGAAACCTGGGCTCAGCTTGTGGAATTGTGGACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
||
| CDS-3UTR GCA 90 bp | AGCGTCCTCTGCCATTCAACAGTGACAACAGAACTAGAAACACATTTCTTTACTTCAAAGCCCGACAGCTaGTCTGGGCTCACGTATTCG | + |
|
Preference number: 4 (lower is better) Translates to: SVLCHSTVTTELETHFFTSKPDS*SGLTYS Trigger: CGAATACGTGAGCCCAGAGCAGCTGTCGGGCTTTGA...AGTAAAGAAATGTGTTTCTAGTTCTGTTGTCACTGTTGAATGGCAGAGGACGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| CDS-3UTR GCA 90 bp | ACACAGAGCACAAGGTGGACGGAACAGTTATCCTCACACAACCGGCTCACCTTCGTGTTCCAAAATGGATaGATGATATACAGAGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TQSTRWTEQLSSHNRLTFVFQNG*MIYRES Trigger: ACTCTCTCTGTATATCATGCATCCATTTTGGAACAC...GAAGGTGAGCCGGTTGTGTGAGGATAACTGTTCCGTCCACCTTGTGCTCTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
||
| CDS-3UTR CCA 90 bp | CTTGGCCTCACTACCATCTCTGATTTCCGTTTTAGTGCTGCTGAAAGGGCAGCGAAAGAAATAGTCACTTaGCTAATGTCATATCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LGLTTISDFRFSAAERAAKEIVT*LMSYPH Trigger: ATGGGGATATGACATTAGCCAAGTGACTATTTCTTT...CGCTGCCCTTTCAGCAGCACTAAAACGGAAATCAGAGATGGTAGTGAGGCCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR CAA 72 bp | ACCGAGAATATTCTACTCTACATGGAATCACAAGCCTaGCAACACTCCAGAAAAGTGAAGCAAGGGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TENILLYMESQA*QHSRKVKQGQS Trigger: GCTTTGCCCTTGCTTCACTTTTCTGGAGTGTTGCAAGGCTTGTGATTCCATGTAGAGTAGAATATTCTCGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| 3UTR CAA 72 bp | AAATTCTGGTCTGTCGTCACAGTTCCTAAAGAGGGCTaGATCAAATCCAGAAGTAATGATGAGAGCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KFWSVVTVPKEG*IKSRSNDESIP Trigger: TGGGATGCTCTCATCATTACTTCTGGATTTGATCAAGCCCTCTTTAGGAACTGTGACGACAGACCAGAATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| CDS-3UTR TCA 90 bp | TACCACAAGATTGGGACTGTCACACGTATTCTTAAAAATCACAGCTCACAGGCATTATACTTCTCCCAGTaGGACAGGATAAAAGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: YHKIGTVTRILKNHSSQALYFSQ*DRIKEN Trigger: GTTTTCTTTTATCCTGTCTCACTGGGAGAAGTATAA...TGCCTGTGAGCTGTGATTTTTAAGAATACGTGTGACAGTCCCAATCTTGTGGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
||
| CDS-3UTR GCA 90 bp | GAATTTAATTACATATCAACACAGTGGTGCCTATTTTATCCAAGTGCAACCTGTTTGGTTCTCCGTGCTTaGTTTCCATCCACTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: EFNYISTQWCLFYPSATCLVLRA*FPSTPS Trigger: AGATGGAGTGGATGGAAAGCAAGCACGGAGAACCAA...ACAGGTTGCACTTGGATAAAATAGGCACCACTGTGTTGATATGTAATTAAATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
||
| CDS-3UTR CCA 90 bp | ACAAGATTGGGACTGTCACACGTATTCTTAAAAATCACAGCTCACAGGCACCCAAAAGAAATAGTCACTTaGCTAATGTCATATCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TRLGLSHVFLKITAHRHPKEIVT*LMSYPH Trigger: ATGGGGATATGACATTAGCCAAGTGACTATTTCTTT...TGGGTGCCTGTGAGCTGTGATTTTTAAGAATACGTGTGACAGTCCCAATCTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
||
| 3UTR CAA 72 bp | AGCTACTGCATATCCTCACAAGTAAGTACCACAAGATaGGGACTGTCACACGTATTCTTAAAAATCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SYCISSQVSTTR*GLSHVFLKITA Trigger: AGCTGTGATTTTTAAGAATACGTGTGACAGTCCCAATCTTGTGGTACTTACTTGTGAGGATATGCAGTAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
||
| CDS-3UTR TCA 90 bp | GAATTTAATTACATATCAACACAGTGGTGCCTATTTTATCCAAGTGCAACCTGTACACTGTACACAAAGTaGAGAGCAAACACGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EFNYISTQWCLFYPSATCTLYTK*RANTER Trigger: TCTCTCCGTGTTTGCTCTTCACTTTGTGTACAGTGT...ACAGGTTGCACTTGGATAAAATAGGCACCACTGTGTTGATATGTAATTAAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| CDS-3UTR GCA 90 bp | GATGAAGTATTTACACGCATCTATTTACAGTACTTTGTCAAGATTACAGGCCGAGTGTTCCAAAATGGATaGATGATATACAGAGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: DEVFTRIYLQYFVKITGRVFQNG*MIYRES Trigger: ACTCTCTCTGTATATCATGCATCCATTTTGGAACAC...TCGGCCTGTAATCTTGACAAAGTACTGTAAATAGATGCGTGTAAATACTTCATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132404.8 |
||
| CDS-3UTR CAA 90 bp | AGCTGCCTCCCAGCCAAAAGAGGGCCGGGCCGACCCAGAAACCTCAACCCCGAAGAAAAGGTTATAAGATaGGGAGCCAGCCAAGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SCLPAKRGPGRPRNLNPEEKVIR*GASQVG Trigger: TCCTACTTGGCTGGCTCCCAATCTTATAACCTTTTC...TTCGGGGTTGAGGTTTCTGGGTCGGCCCGGCCCTCTTTTGGCTGGGAGGCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| CDS-3UTR CAA 90 bp | GGAGTACACAGTCACAACAAAGTAAACACACGACCAACTGTCCAGGCCATGGTCGCGCTGTACTTGTACTaGTCAAAGCCCGACAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GVHSHNKVNTRPTVQAMVALYLY*SKPDSC Trigger: GCAGCTGTCGGGCTTTGACAAGTACAAGTACAGCGC...GACCATGGCCTGGACAGTTGGTCGTGTGTTTACTTTGTTGTGACTGTGTACTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145858.8 |
||
| CDS-3UTR CAA 90 bp | ACACAGAGCACAAGGTGGACGGAACAGTTATCCTCACACAACCGGCTCACCTTCCAGCTGCTTCACCACTaGTACGCCATAATGGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: TQSTRWTEQLSSHNRLTFQLLHH*YAIMDV Trigger: CACATCCATTATGGCGTACAAGTGGTGAAGCAGCTG...GAAGGTGAGCCGGTTGTGTGAGGATAACTGTTCCGTCCACCTTGTGCTCTGTGT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
||
| CDS-3UTR CAA 90 bp | ACAACCGGCTCACCTTCCAGCCTCCATGATGGCAATTTATTAACAAGCACAGAAGCGCTGTACTTGTACTaGTCAAAGCCCGACAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TTGSPSSLHDGNLLTSTEALYLY*SKPDSC Trigger: GCAGCTGTCGGGCTTTGACAAGTACAAGTACAGCGC...TTCTGTGCTTGTTAATAAATTGCCATCATGGAGGCTGGAAGGTGAGCCGGTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
||
| CDS-3UTR CAA 90 bp | ACAAGATTGGGACTGTCACACGTATTCTTAAAAATCACAGCTCACAGGCACCCAGCGCTGTACTTGTACTaGTCAAAGCCCGACAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TRLGLSHVFLKITAHRHPALYLY*SKPDSC Trigger: GCAGCTGTCGGGCTTTGACAAGTACAAGTACAGCGC...TGGGTGCCTGTGAGCTGTGATTTTTAAGAATACGTGTGACAGTCCCAATCTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
||
| CDS-3UTR CAA 90 bp | TCGTTCGTTATCCTGTGTGAGAATAAAAACCACAACAGCTCACCCCCAGGGAGAATTGGTTCTCCGTGCTaGCTTTCCATCCACTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: SFVILCENKNHNSSPPGRIGSPC*LSIHSI Trigger: GATGGAGTGGATGGAAAGCAAGCACGGAGAACCAAT...TCTCCCTGGGGGTGAGCTGTTGTGGTTTTTATTCTCACACAGGATAACGAACGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
||
| CDS-3UTR CAA 90 bp | CTCAGAGAATGTCTCCAGATACACGTAAGCCCCTGGGCTTATCTTCGACAGCCTGTCAGGAGTAGGAAATaGAACACAAGCAGCATAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LRECLQIHVSPWAYLRQPVRSRK*NTSSIK Trigger: CTTTATGCTGCTTGTGTTCAATTTCCTACTCCTGAC...AGGCTGTCGAAGATAAGCCCAGGGGCTTACGTGTATCTGGAGACATTCTCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
||
| CDS CCA 90 bp | CAGGCACATGCTTATGACCAGGGGCTTCACTATAGTGTTCCAAAATaGATGCATGATATACAGAGAGAGTGGGTTGGTATCCAAAGCGCT | + |
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Preference number: 5 (lower is better) Translates to: QAHAYDQGLHYSVPK*MHDIQREWVGIQSA Trigger: AGCGCTTTGGATACCAACCCACTCTCTCTGTATATCATGCATCCATTTTGGAACACTATAGTGAAGCCCCTGGTCATAAGCATGTGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145858.8 |
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| CDS-3UTR CAA 90 bp | CTGCTGAGAAACAGCAATCTCAACAGGCCATCCCTACGTGCTTACCAGGAATTCGTCAGGAGTAGGAAATaGAACACAAGCAGCATAAAG | + |
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Preference number: 5 (lower is better) Translates to: LLRNSNLNRPSLRAYQEFVRSRK*NTSSIK Trigger: CTTTATGCTGCTTGTGTTCAATTTCCTACTCCTGAC...GAATTCCTGGTAAGCACGTAGGGATGGCCTGTTGAGATTGCTGTTTCTCAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
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| CDS GCA 90 bp | CACATGCTTATGACCAGGGGCTTCACTATAGTGTTCCAAAATGGATaGATGATATACAGAGAGAGTGGGTTGGTATCCAAAGCGCTGTAC | + |
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Preference number: 5 (lower is better) Translates to: HMLMTRGFTIVFQNG*MIYRESGLVSKALY Trigger: GTACAGCGCTTTGGATACCAACCCACTCTCTCTGTATATCATGCATCCATTTTGGAACACTATAGTGAAGCCCCTGGTCATAAGCATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145858.8 |
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| CDS-3UTR CAA 90 bp | CTTGGCCTCACTACCATCTCTGATTTCCGTTTTAGTGCTGCTGAAAGGGCAGCGAAAAGAAATAGTCACTaGGCTAATGTCATATCCCCA | + |
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Preference number: 5 (lower is better) Translates to: LGLTTISDFRFSAAERAAKRNSH*ANVISP Trigger: TGGGGATATGACATTAGCCAAGTGACTATTTCTTTT...CGCTGCCCTTTCAGCAGCACTAAAACGGAAATCAGAGATGGTAGTGAGGCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
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| CDS-3UTR CAA 90 bp | GACATGATTTTTCAGTCTACTGTACAAGGTGAAGAAAGCCTGTGGTCCAAATTCGAAAAGGTTATAAGATaGGGAGCCAGCCAAGTAGGA | + |
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Preference number: 5 (lower is better) Translates to: DMIFQSTVQGEESLWSKFEKVIR*GASQVG Trigger: TCCTACTTGGCTGGCTCCCAATCTTATAACCTTTTC...GAATTTGGACCACAGGCTTTCTTCACCTTGTACAGTAGACTGAAAAATCATGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
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| CDS-3UTR CAA 90 bp | AAGTCCACAATTCCACAAGCTGAGCCCAGGTTTCATTCTTGCTGTCCATATAGCAAAAGAAATAGTCACTaGGCTAATGTCATATCCCCA | + |
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Preference number: 5 (lower is better) Translates to: KSTIPQAEPRFHSCCPYSKRNSH*ANVISP Trigger: TGGGGATATGACATTAGCCAAGTGACTATTTCTTTT...GCTATATGGACAGCAAGAATGAAACCTGGGCTCAGCTTGTGGAATTGTGGACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
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| CDS-3UTR CAA 90 bp | GAATTTAATTACATATCAACACAGTGGTGCCTATTTTATCCAAGTGCAACCTGTCTAGTCAATCTGAGTTaGGTTTCCTCAATGAAAAAG | + |
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Preference number: 5 (lower is better) Translates to: EFNYISTQWCLFYPSATCLVNLS*VSSMKK Trigger: CTTTTTCATTGAGGAAACCAAACTCAGATTGACTAG...ACAGGTTGCACTTGGATAAAATAGGCACCACTGTGTTGATATGTAATTAAATTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
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| CDS TCA 72 bp | CCAAACCCAGTCAGGCACATGCTTATGACCAGGGGCTaGAGCATAGAAGTCAGGGTCGAAGTATGTCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: PNPVRHMLMTRG*SIEVRVEVCQE Trigger: CTCCTGACATACTTCGACCCTGACTTCTATGCTTCAGCCCCTGGTCATAAGCATGTGCCTGACTGGGTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145167.9 |
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| CDS CAA 72 bp | GAGAGTGGGTTGGTATCCAAAGCGCTGTACTTGTACTaGTCAAAGCCCGACAGCTGCTCTGGGCTCACGTAT | + |
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Preference number: 6 (lower is better) Translates to: ESGLVSKALYLY*SKPDSCSGLTY Trigger: ATACGTGAGCCCAGAGCAGCTGTCGGGCTTTGACAAGTACAAGTACAGCGCTTTGGATACCAACCCACTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 ENSMUST00000145858.8 |
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| CDS CAA 90 bp | TGCATGATATACAGAGAGAGTGGGTTGGTATCCAAAGCGCTGTACTaGTACTTGTCAAAGCCCGACAGCTGCTCTGGGCTCACGTATTCG | + |
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Preference number: 6 (lower is better) Translates to: CMIYRESGLVSKALY*YLSKPDSCSGLTYS Trigger: CGAATACGTGAGCCCAGAGCAGCTGTCGGGCTTTGACAAGTACAAGTACAGCGCTTTGGATACCAACCCACTCTCTCTGTATATCATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 ENSMUST00000145858.8 |
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| CDS CCA 72 bp | GCTTATGACCAGGGGCTTCACTATAGTGTTCCAAAATaGATGCATGATATACAGAGAGAGTGGGTTGGTATC | + |
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Preference number: 6 (lower is better) Translates to: AYDQGLHYSVPK*MHDIQREWVGI Trigger: GATACCAACCCACTCTCTCTGTATATCATGCATCCATTTTGGAACACTATAGTGAAGCCCCTGGTCATAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145858.8 |
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| CDS GCA 72 bp | ATGACCAGGGGCTTCACTATAGTGTTCCAAAATGGATaGATGATATACAGAGAGAGTGGGTTGGTATCCAAA | + |
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Preference number: 6 (lower is better) Translates to: MTRGFTIVFQNG*MIYRESGLVSK Trigger: TTTGGATACCAACCCACTCTCTCTGTATATCATGCATCCATTTTGGAACACTATAGTGAAGCCCCTGGTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145858.8 |
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| CDS GCA 72 bp | GTAGGAAACACCTTCACTATAGTGTTCCAAAATGGATaGATGATATACAGAGAGAGTGGGTTGGTATCCAAA | + |
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Preference number: 6 (lower is better) Translates to: VGNTFTIVFQNG*MIYRESGLVSK Trigger: TTTGGATACCAACCCACTCTCTCTGTATATCATGCATCCATTTTGGAACACTATAGTGAAGGTGTTTCCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132404.8 ENSMUST00000145167.9 |
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