Pregenerated sensors for SELENBP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068877Ensembl transcript IDs: ENSMUST00000090848.10, ENSMUST00000131650.9, ENSMUST00000173849.8, ENSMUST00000173981.8, ENSMUST00000174223.2
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAACGGTACAGAGATGCTGCTCTACAGATCTCGCTGGTCTCAGAGTaGCCTTGGAGAGTTGGGGCTGAGAGCAGAGTGAAGCCAGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: QRYRDAALQISLVSE*PWRVGAESRVKPGR Trigger: CCTGCCTGGCTTCACTCTGCTCTCAGCCCCAACTCTCCAAGGCCACTCTGAGACCAGCGAGATCTGTAGAGCAGCATCTCTGTACCGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090848.10 |
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| 3UTR GCA 90 bp | GACATTGTGTCGAGGCTGGTACCAGAAGTCGTAGCCCATTGGAGATaGACCCCCAGGCTTCTCCCATGTCCCTTTCACCTCGAAGGTCTC | + |
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Preference number: 1 (lower is better) Translates to: DIVSRLVPEVVAHWR*TPRLLPCPFHLEGL Trigger: GAGACCTTCGAGGTGAAAGGGACATGGGAGAAGCCTGGGGGTGCATCTCCAATGGGCTACGACTTCTGGTACCAGCCTCGACACAATGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131650.9 |
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| 3UTR CCA 90 bp | GCCAGGCAGTGGCTGGTGTGCGTATTGCTCACGTTGCACTTGGCTTaGATTTCACTGGCTTCAATGACCTTGTGCAACTTCGGGGCACGA | + |
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Preference number: 1 (lower is better) Translates to: ARQWLVCVLLTLHLA*ISLASMTLCNFGAR Trigger: TCGTGCCCCGAAGTTGCACAAGGTCATTGAAGCCAGTGAAATCCAAGCCAAGTGCAACGTGAGCAATACGCACACCAGCCACTGCCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131650.9 |
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| 3UTR CCA 90 bp | AGATCCCCCAAGGTGTTGACCATGACTTCTCCACTGGCCAGGCAGTaGCTGGTGTGCGTATTGCTCACGTTGCACTTGGCTTGGATTTCA | + |
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Preference number: 1 (lower is better) Translates to: RSPKVLTMTSPLARQ*LVCVLLTLHLAWIS Trigger: TGAAATCCAAGCCAAGTGCAACGTGAGCAATACGCACACCAGCCACTGCCTGGCCAGTGGAGAAGTCATGGTCAACACCTTGGGGGATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131650.9 |
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| 3UTR GCA 90 bp | CTCCACATGAGCCGGGTTGAAGCCATCTTTGAAGACATTGGGAGCTaGCCATTCAGTGCTGACCATGACATTGTGTCGAGGCTGGTACCA | + |
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Preference number: 1 (lower is better) Translates to: LHMSRVEAIFEDIGS*PFSADHDIVSRLVP Trigger: TGGTACCAGCCTCGACACAATGTCATGGTCAGCACTGAATGGGCAGCTCCCAATGTCTTCAAAGATGGCTTCAACCCGGCTCATGTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131650.9 |
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| 3UTR CAA 90 bp | GGCCAGGCAGTGGCTGGTGTGCGTATTGCTCACGTTGCACTTGGCTaGGATTTCACTGGCTTCAATGACCTTGTGCAACTTCGGGGCACG | + |
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Preference number: 2 (lower is better) Translates to: GQAVAGVRIAHVALG*DFTGFNDLVQLRGT Trigger: CGTGCCCCGAAGTTGCACAAGGTCATTGAAGCCAGTGAAATCCAAGCCAAGTGCAACGTGAGCAATACGCACACCAGCCACTGCCTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131650.9 |
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| 3UTR-3UTR CCA 90 bp | CACCTCGAAGGTCTCCCCATCCAGCAGCACAAAACTCCCTTTGCCATTACCCTGTGGCCAGGCAGTGGCTaGTGTGCGTATTGCTCACGT | + |
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Preference number: 2 (lower is better) Translates to: HLEGLPIQQHKTPFAITLWPGSG*CAYCSR Trigger: ACGTGAGCAATACGCACACCAGCCACTGCCTGGCCA...CAGGGTAATGGCAAAGGGAGTTTTGTGCTGCTGGATGGGGAGACCTTCGAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131650.9 |
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| 3UTR CAA 90 bp | CCACTGGCCAGGCAGTGGCTGGTGTGCGTATTGCTCACGTTGCACTaGGCTTGGATTTCACTGGCTTCAATGACCTTGTGCAACTTCGGG | + |
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Preference number: 2 (lower is better) Translates to: PLARQWLVCVLLTLH*AWISLASMTLCNFG Trigger: CCCGAAGTTGCACAAGGTCATTGAAGCCAGTGAAATCCAAGCCAAGTGCAACGTGAGCAATACGCACACCAGCCACTGCCTGGCCAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131650.9 |
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| 3UTR-3UTR CCA 90 bp | AAACTCCCTTTGCCATTACCCTGGAGATCCCCCAAGGTGTTGACCATGACTTCTCCACTGGCCAGGCAGTaGCTGGTGTGCGTATTGCTC | + |
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Preference number: 2 (lower is better) Translates to: KLPLPLPWRSPKVLTMTSPLARQ*LVCVLL Trigger: GAGCAATACGCACACCAGCCACTGCCTGGCCAGTGG...AGAAGTCATGGTCAACACCTTGGGGGATCTCCAGGGTAATGGCAAAGGGAGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131650.9 |
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| 3UTR CAA 90 bp | ACTTCTCCACTGGCCAGGCAGTGGCTGGTGTGCGTATTGCTCACGTaGCACTTGGCTTGGATTTCACTGGCTTCAATGACCTTGTGCAAC | + |
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Preference number: 2 (lower is better) Translates to: TSPLARQWLVCVLLT*HLAWISLASMTLCN Trigger: GTTGCACAAGGTCATTGAAGCCAGTGAAATCCAAGCCAAGTGCAACGTGAGCAATACGCACACCAGCCACTGCCTGGCCAGTGGAGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131650.9 |
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| 3UTR CAA 90 bp | TTGACCATGACTTCTCCACTGGCCAGGCAGTGGCTGGTGTGCGTATaGCTCACGTTGCACTTGGCTTGGATTTCACTGGCTTCAATGACC | + |
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Preference number: 2 (lower is better) Translates to: LTMTSPLARQWLVCV*LTLHLAWISLASMT Trigger: GGTCATTGAAGCCAGTGAAATCCAAGCCAAGTGCAACGTGAGCAATACGCACACCAGCCACTGCCTGGCCAGTGGAGAAGTCATGGTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131650.9 |
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| 3UTR-3UTR TCA 90 bp | CGGGTTGAAGCCATCTTTGAAGACATTGGGAGCTGCCCATTCAGTGCTGACCATTTTCACTGGCTTCAATaGCCTTGTGCAACTTCGGGG | + |
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Preference number: 2 (lower is better) Translates to: RVEAIFEDIGSCPFSADHFHWLQ*PCATSG Trigger: CCCCGAAGTTGCACAAGGTCATTGAAGCCAGTGAAA...ATGGTCAGCACTGAATGGGCAGCTCCCAATGTCTTCAAAGATGGCTTCAACCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131650.9 |
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| 3UTR-3UTR CCA 90 bp | TTAAGAAAAGTACAAACAACAAGCAACGGTACAGAGATGCTGCTCTACAGATCTGTCTCAGAGTGGCCTTaGAGAGTTGGGGCTGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: LRKVQTTSNGTEMLLYRSVSEWP*RVGAES Trigger: GCTCTCAGCCCCAACTCTCCAAGGCCACTCTGAGAC...AGATCTGTAGAGCAGCATCTCTGTACCGTTGCTTGTTGTTTGTACTTTTCTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090848.10 |
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| 3UTR-3UTR CCA 90 bp | TTCAGCATTTTATTTCCAGGTGCTTCCAGGAGCTCACTTAAGAAAAGTACAAACTCGCTGGTCTCAGAGTaGCCTTGGAGAGTTGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: FSILFPGASRSSLKKSTNSLVSE*PWRVGA Trigger: AGCCCCAACTCTCCAAGGCCACTCTGAGACCAGCGA...GTTTGTACTTTTCTTAAGTGAGCTCCTGGAAGCACCTGGAAATAAAATGCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090848.10 |
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| 3UTR GCA 72 bp | TCGAGGCTGGTACCAGAAGTCGTAGCCCATTGGAGATaGACCCCCAGGCTTCTCCCATGTCCCTTTCACCTC | + |
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Preference number: 3 (lower is better) Translates to: SRLVPEVVAHWR*TPRLLPCPFHL Trigger: GAGGTGAAAGGGACATGGGAGAAGCCTGGGGGTGCATCTCCAATGGGCTACGACTTCTGGTACCAGCCTCGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131650.9 |
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| 3UTR GCA 72 bp | CTTCTCCACTGGCCAGGCAGTGGCTGGTGTGCGTATTaGTCACGTTGCACTTGGCTTGGATTTCACTGGCTT | + |
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Preference number: 3 (lower is better) Translates to: LLHWPGSGWCAY*SRCTWLGFHWL Trigger: AAGCCAGTGAAATCCAAGCCAAGTGCAACGTGAGCAATACGCACACCAGCCACTGCCTGGCCAGTGGAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131650.9 |
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| 3UTR CCA 72 bp | AGAGATGCTGCTCTACAGATCTCGCTGGTCTCAGAGTaGCCTTGGAGAGTTGGGGCTGAGAGCAGAGTGAAG | + |
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Preference number: 3 (lower is better) Translates to: RDAALQISLVSE*PWRVGAESRVK Trigger: CTTCACTCTGCTCTCAGCCCCAACTCTCCAAGGCCACTCTGAGACCAGCGAGATCTGTAGAGCAGCATCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090848.10 |
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| 3UTR CCA 72 bp | AAGGTGTTGACCATGACTTCTCCACTGGCCAGGCAGTaGCTGGTGTGCGTATTGCTCACGTTGCACTTGGCT | + |
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Preference number: 3 (lower is better) Translates to: KVLTMTSPLARQ*LVCVLLTLHLA Trigger: AGCCAAGTGCAACGTGAGCAATACGCACACCAGCCACTGCCTGGCCAGTGGAGAAGTCATGGTCAACACCTT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131650.9 |
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| 3UTR CCA 72 bp | TGGCTGGTGTGCGTATTGCTCACGTTGCACTTGGCTTaGATTTCACTGGCTTCAATGACCTTGTGCAACTTC | + |
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Preference number: 3 (lower is better) Translates to: WLVCVLLTLHLA*ISLASMTLCNF Trigger: GAAGTTGCACAAGGTCATTGAAGCCAGTGAAATCCAAGCCAAGTGCAACGTGAGCAATACGCACACCAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131650.9 |
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| CDS-3UTR CCA 90 bp | CTTCTCCACTGGCCAGGCAGTGGCTGGTGTGCGTATTGCTCACGTTGCACTTGGGTGGATGACCTTTCATaGCCTCCAGAGGGGTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: LLHWPGSGWCAYCSRCTWVDDLS*PPEGWG Trigger: ACCCCACCCCTCTGGAGGCCATGAAAGGTCATCCAC...CCAAGTGCAACGTGAGCAATACGCACACCAGCCACTGCCTGGCCAGTGGAGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131650.9 |
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| 3UTR CAA 72 bp | CTCCCTTTGCCATTACCCTGGAGATCCCCCAAGGTGTaGACCATGACTTCTCCACTGGCCAGGCAGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LPLPLPWRSPKV*TMTSPLARQWL Trigger: CAGCCACTGCCTGGCCAGTGGAGAAGTCATGGTCAACACCTTGGGGGATCTCCAGGGTAATGGCAAAGGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131650.9 |
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| 3UTR CAA 72 bp | CATTGTGTCGAGGCTGGTACCAGAAGTCGTAGCCCATaGGAGATGCACCCCCAGGCTTCTCCCATGTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: HCVEAGTRSRSP*EMHPQASPMSL Trigger: AAGGGACATGGGAGAAGCCTGGGGGTGCATCTCCAATGGGCTACGACTTCTGGTACCAGCCTCGACACAATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131650.9 |
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| 3UTR CAA 72 bp | CTGGCCAGGCAGTGGCTGGTGTGCGTATTGCTCACGTaGCACTTGGCTTGGATTTCACTGGCTTCAATGACC | + |
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Preference number: 4 (lower is better) Translates to: LARQWLVCVLLT*HLAWISLASMT Trigger: GGTCATTGAAGCCAGTGAAATCCAAGCCAAGTGCAACGTGAGCAATACGCACACCAGCCACTGCCTGGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131650.9 |
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| 3UTR CAA 72 bp | ACTTCTCCACTGGCCAGGCAGTGGCTGGTGTGCGTATaGCTCACGTTGCACTTGGCTTGGATTTCACTGGCT | + |
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Preference number: 4 (lower is better) Translates to: TSPLARQWLVCV*LTLHLAWISLA Trigger: AGCCAGTGAAATCCAAGCCAAGTGCAACGTGAGCAATACGCACACCAGCCACTGCCTGGCCAGTGGAGAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131650.9 |
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| CDS-3UTR CCA 90 bp | CAGCACAAAACTCCCTTTGCCATTACCCTGGAGATCCCCCAAGGTGTTGACCATGTGTTCCATCCTGAGTaGTGCAGCTCGTCCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: QHKTPFAITLEIPQGVDHVFHPE*CSSSFR Trigger: CCTGAAGGACGAGCTGCACCACTCAGGATGGAACAC...ATGGTCAACACCTTGGGGGATCTCCAGGGTAATGGCAAAGGGAGTTTTGTGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131650.9 |
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| CDS-3UTR CCA 90 bp | AGAAAAGTACAAACAACAAGCAACGGTACAGAGATGCTGCTCTACAGATCTCGCCTCGTGAGCCAGTGCTaGCCCAAGGGGCTCCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: RKVQTTSNGTEMLLYRSRLVSQC*PKGLLP Trigger: GGGAAGGAGCCCCTTGGGCCAGCACTGGCTCACGAG...GCGAGATCTGTAGAGCAGCATCTCTGTACCGTTGCTTGTTGTTTGTACTTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090848.10 |
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| 3UTR CAA 72 bp | AGGCAGTGGCTGGTGTGCGTATTGCTCACGTTGCACTaGGCTTGGATTTCACTGGCTTCAATGACCTTGTGC | + |
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Preference number: 4 (lower is better) Translates to: RQWLVCVLLTLH*AWISLASMTLC Trigger: GCACAAGGTCATTGAAGCCAGTGAAATCCAAGCCAAGTGCAACGTGAGCAATACGCACACCAGCCACTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131650.9 |
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| CDS-3UTR CCA 90 bp | GCTGACCATGACATTGTGTCGAGGCTGGTACCAGAAGTCGTAGCCCATTGGAGAAGGGGTGGGGTAACCTaGACCACACTTTGTGCATTT | + |
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Preference number: 4 (lower is better) Translates to: ADHDIVSRLVPEVVAHWRRGGVT*TTLCAF Trigger: AAATGCACAAAGTGTGGTCCAGGTTACCCCACCCCT...TCTCCAATGGGCTACGACTTCTGGTACCAGCCTCGACACAATGTCATGGTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131650.9 |
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| CDS-3UTR CCA 90 bp | AAGAAAAGTACAAACAACAAGCAACGGTACAGAGATGCTGCTCTACAGATCTCGCCACTGGCCAGGCAGTaGCTGGTGTGCGTATTGCTC | + |
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Preference number: 4 (lower is better) Translates to: KKSTNNKQRYRDAALQISPLARQ*LVCVLL Trigger: GAGCAATACGCACACCAGCCACTGCCTGGCCAGTGG...CGAGATCTGTAGAGCAGCATCTCTGTACCGTTGCTTGTTGTTTGTACTTTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090848.10 |
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| CDS-3UTR CCA 90 bp | CCAGGTGCTTCCAGGAGCTCACTTAAGAAAAGTACAAACAACAAGCAACGGTACCTACAAAACCCTGGGTaGCACTTGGGTCGTGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: PGASRSSLKKSTNNKQRYLQNPG*HLGRAG Trigger: TCCTGCACGACCCAAGTGCCACCCAGGGTTTTGTAG...GTACCGTTGCTTGTTGTTTGTACTTTTCTTAAGTGAGCTCCTGGAAGCACCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090848.10 |
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| CDS-3UTR CCA 90 bp | AGAAAAGTACAAACAACAAGCAACGGTACAGAGATGCTGCTCTACAGATCTCGCGTGTTCCATCCTGAGTaGTGCAGCTCGTCCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: RKVQTTSNGTEMLLYRSRVFHPE*CSSSFR Trigger: CCTGAAGGACGAGCTGCACCACTCAGGATGGAACAC...GCGAGATCTGTAGAGCAGCATCTCTGTACCGTTGCTTGTTGTTTGTACTTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090848.10 |
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| CDS-3UTR CCA 90 bp | AAGAAAAGTACAAACAACAAGCAACGGTACAGAGATGCTGCTCTACAGATCTCGTGGCCAGGCAGTGGCTaGTGTGCGTATTGCTCACGT | + |
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Preference number: 4 (lower is better) Translates to: KKSTNNKQRYRDAALQISWPGSG*CAYCSR Trigger: ACGTGAGCAATACGCACACCAGCCACTGCCTGGCCA...CGAGATCTGTAGAGCAGCATCTCTGTACCGTTGCTTGTTGTTTGTACTTTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090848.10 |
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| CDS-3UTR CCA 90 bp | CCAGGTGCTTCCAGGAGCTCACTTAAGAAAAGTACAAACAACAAGCAACGGTACAGTCCACCAGAAAGTTaGGGTTCAACTTCAGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: PGASRSSLKKSTNNKQRYSPPES*GSTSAL Trigger: GAGGGCTGAAGTTGAACCCCAACTTTCTGGTGGACT...GTACCGTTGCTTGTTGTTTGTACTTTTCTTAAGTGAGCTCCTGGAAGCACCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090848.10 |
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| CDS-3UTR GCA 90 bp | AGTTTCAGCATTTTATTTCCAGGTGCTTCCAGGAGCTCACTTAAGAAAAGTACAGTAGCCCATTGGAGATaGACCCCCAGGCTTCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: SFSILFPGASRSSLKKSTVAHWR*TPRLLP Trigger: TGGGAGAAGCCTGGGGGTGCATCTCCAATGGGCTAC...TGTACTTTTCTTAAGTGAGCTCCTGGAAGCACCTGGAAATAAAATGCTGAAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090848.10 |
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| CDS-3UTR CCA 90 bp | AGAAAAGTACAAACAACAAGCAACGGTACAGAGATGCTGCTCTACAGATCTCGCGTCATTTGCAGGGTCTaGATAATCTCATGGCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: RKVQTTSNGTEMLLYRSRVICRV*IISWRC Trigger: GCAGCGCCATGAGATTATCCAGACCCTGCAAATGAC...GCGAGATCTGTAGAGCAGCATCTCTGTACCGTTGCTTGTTGTTTGTACTTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090848.10 |
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| CDS-3UTR CCA 90 bp | GGAGCTCACTTAAGAAAAGTACAAACAACAAGCAACGGTACAGAGATGCTGCTCTTCTTGGAGGGCACTTaGATCACCTTCTCCACTGAC | + |
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Preference number: 4 (lower is better) Translates to: GAHLRKVQTTSNGTEMLLFLEGT*ITFSTD Trigger: GTCAGTGGAGAAGGTGATCCAAGTGCCCTCCAAGAA...GAGCAGCATCTCTGTACCGTTGCTTGTTGTTTGTACTTTTCTTAAGTGAGCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090848.10 |
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| CDS-3UTR CCA 90 bp | TCCAGGAGCTCACTTAAGAAAAGTACAAACAACAAGCAACGGTACAGAGATGCTGAGGCGGGGCTTCTGTaGGTTAGAGATGTCATACTG | + |
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Preference number: 4 (lower is better) Translates to: SRSSLKKSTNNKQRYRDAEAGLL*VRDVIL Trigger: CAGTATGACATCTCTAACCCACAGAAGCCCCGCCTC...AGCATCTCTGTACCGTTGCTTGTTGTTTGTACTTTTCTTAAGTGAGCTCCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090848.10 |
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| CDS-3UTR TCA 90 bp | TCCAGGAGCTCACTTAAGAAAAGTACAAACAACAAGCAACGGTACAGAGATGCTGTGTCTACATCAACTTaGAGCATCACGGAGCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: SRSSLKKSTNNKQRYRDAVSTST*SITEPS Trigger: GGAAGGCTCCGTGATGCTTCAAGTTGATGTAGACAC...AGCATCTCTGTACCGTTGCTTGTTGTTTGTACTTTTCTTAAGTGAGCTCCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090848.10 |
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| CDS-3UTR CCA 90 bp | TCCAGGAGCTCACTTAAGAAAAGTACAAACAACAAGCAACGGTACAGAGATGCTGGTCTACATCCACAGTaGCCAAATAATCCGGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: SRSSLKKSTNNKQRYRDAGLHPQ*PNNPGL Trigger: AAGCCCCGGATTATTTGGCCACTGTGGATGTAGACC...AGCATCTCTGTACCGTTGCTTGTTGTTTGTACTTTTCTTAAGTGAGCTCCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090848.10 |
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| CDS-3UTR CCA 90 bp | GCTTCCAGGAGCTCACTTAAGAAAAGTACAAACAACAAGCAACGGTACAGAGATCAAACCAGGCATTTCTaGCAACATCCAGCCCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: ASRSSLKKSTNNKQRYRDQTRHF*QHPALH Trigger: GTGAAGGGCTGGATGTTGCCAGAAATGCCTGGTTTG...ATCTCTGTACCGTTGCTTGTTGTTTGTACTTTTCTTAAGTGAGCTCCTGGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090848.10 |
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| CDS-3UTR CCA 90 bp | TCAGCATTTTATTTCCAGGTGCTTCCAGGAGCTCACTTAAGAAAAGTACAAACACCTTTGCCATTACCCTaGAGATCCCCCAAGGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: SAFYFQVLPGAHLRKVQTPLPLP*RSPKVL Trigger: CAACACCTTGGGGGATCTCCAGGGTAATGGCAAAGG...TGTTTGTACTTTTCTTAAGTGAGCTCCTGGAAGCACCTGGAAATAAAATGCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090848.10 |
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| CDS-3UTR CCA 90 bp | AGTTTCAGCATTTTATTTCCAGGTGCTTCCAGGAGCTCACTTAAGAAAAGTACAGTCTGGATAATCTCATaGCGCTGCCAGTCCCACACA | + |
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Preference number: 4 (lower is better) Translates to: SFSILFPGASRSSLKKSTVWIIS*RCQSHT Trigger: TGTGTGGGACTGGCAGCGCCATGAGATTATCCAGAC...TGTACTTTTCTTAAGTGAGCTCCTGGAAGCACCTGGAAATAAAATGCTGAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090848.10 |
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| CDS-3UTR CCA 90 bp | TTAAGAAAAGTACAAACAACAAGCAACGGTACAGAGATGCTGCTCTACAGATCTAGGGGTGGGGTAACCTaGACCACACTTTGTGCATTT | + |
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Preference number: 4 (lower is better) Translates to: LRKVQTTSNGTEMLLYRSRGGVT*TTLCAF Trigger: AAATGCACAAAGTGTGGTCCAGGTTACCCCACCCCT...AGATCTGTAGAGCAGCATCTCTGTACCGTTGCTTGTTGTTTGTACTTTTCTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090848.10 |
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| CDS-3UTR CCA 90 bp | TCAGCATTTTATTTCCAGGTGCTTCCAGGAGCTCACTTAAGAAAAGTACAAACAAGCCCTTCACTTTCTTaGAGGGCACTTGGATCACCT | + |
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Preference number: 4 (lower is better) Translates to: SAFYFQVLPGAHLRKVQTSPSLS*RALGSP Trigger: AGGTGATCCAAGTGCCCTCCAAGAAAGTGAAGGGCT...TGTTTGTACTTTTCTTAAGTGAGCTCCTGGAAGCACCTGGAAATAAAATGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090848.10 |
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| CDS-3UTR GCA 90 bp | TTCAGCATTTTATTTCCAGGTGCTTCCAGGAGCTCACTTAAGAAAAGTACAAACTCTCCACTGACCAAGTaGCTTCCTCATTCTTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: FSILFPGASRSSLKKSTNSPLTK*LPHSCR Trigger: TCTACAAGAATGAGGAAGGCACTTGGTCAGTGGAGA...GTTTGTACTTTTCTTAAGTGAGCTCCTGGAAGCACCTGGAAATAAAATGCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090848.10 |
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| CDS TCA 90 bp | CACGAGGCTCAGAGCCCACATCCACCACGTAGATGCGGGAGGACATaGGACCAGGCAGTATCAGCTTGTTGCGTGACTTCGTGCTGTCCC | + |
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Preference number: 5 (lower is better) Translates to: HEAQSPHPPRRCGRT*DQAVSACCVTSCCP Trigger: GGGACAGCACGAAGTCACGCAACAAGCTGATACTGCCTGGTCTCATGTCCTCCCGCATCTACGTGGTGGATGTGGGCTCTGAGCCTCGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090848.10 ENSMUST00000173981.8 ENSMUST00000174223.2 |
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| CDS GCA 90 bp | ATCAGAACTGCAGTCACCCCCTGGGTAACGAAGCTCGTGAGCCAGTaGTGGCCCAAGGGGCTCCTTCCCAAAGTCCACCAGAAAGTTGGG | + |
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Preference number: 5 (lower is better) Translates to: IRTAVTPWVTKLVSQ*WPKGLLPKVHQKVG Trigger: CCCAACTTTCTGGTGGACTTTGGGAAGGAGCCCCTTGGGCCAGCACTGGCTCACGAGCTTCGTTACCCAGGGGGTGACTGCAGTTCTGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090848.10 ENSMUST00000173849.8 |
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| CDS TCA 90 bp | GTAGATGCGGGAGGACATGAGACCAGGCAGTATCAGCTTGTTGCGTaGCTTCGTGCTGTCCCCAAAGCAGCTGCTGCAGGTGTTCCATCC | + |
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Preference number: 5 (lower is better) Translates to: VDAGGHETRQYQLVA*LRAVPKAAAAGVPS Trigger: GGATGGAACACCTGCAGCAGCTGCTTTGGGGACAGCACGAAGTCACGCAACAAGCTGATACTGCCTGGTCTCATGTCCTCCCGCATCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090848.10 ENSMUST00000131650.9 ENSMUST00000173981.8 ENSMUST00000174223.2 |
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| CDS TCA 90 bp | ACCAAGTGCCTTCCTCATTCTTGTAGAAGCGCTGGATGTTGGAGCTaGGGGCACAGCCTACAAAACCCTGGGTGGCACTTGGGTCGTGCA | + |
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Preference number: 5 (lower is better) Translates to: TKCLPHSCRSAGCWS*GHSLQNPGWHLGRA Trigger: TGCACGACCCAAGTGCCACCCAGGGTTTTGTAGGCTGTGCCCTCAGCTCCAACATCCAGCGCTTCTACAAGAATGAGGAAGGCACTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090848.10 ENSMUST00000173849.8 |
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| CDS GCA 90 bp | CAGTGGCCAAATAATCCGGGGCTTCGGTGCCTGTGTTCCGGTAAATaGAGGGCAAGTAGACAATCTCCTCTCGGGGTCCTTTCATGGCCT | + |
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Preference number: 5 (lower is better) Translates to: QWPNNPGLRCLCSGK*RASRQSPLGVLSWP Trigger: AGGCCATGAAAGGACCCCGAGAGGAGATTGTCTACTTGCCCTGCATTTACCGGAACACAGGCACCGAAGCCCCGGATTATTTGGCCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090848.10 ENSMUST00000173849.8 |
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| CDS GCA 90 bp | ATCAGCCCATCTGTCATTTGCAGGGTCTGGATAATCTCATGGCGCTaGCAGTCCCACACAAATATGCGGCTCCCATACAGCCCAGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: ISPSVICRVWIISWR*QSHTNMRLPYSPAS Trigger: GGAGGCTGGGCTGTATGGGAGCCGCATATTTGTGTGGGACTGGCAGCGCCATGAGATTATCCAGACCCTGCAAATGACAGATGGGCTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090848.10 ENSMUST00000173849.8 |
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| CDS CCA 90 bp | AGGGGTATCAGCCCATCTGTCATTTGCAGGGTCTGGATAATCTCATaGCGCTGCCAGTCCCACACAAATATGCGGCTCCCATACAGCCCA | + |
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Preference number: 5 (lower is better) Translates to: RGISPSVICRVWIIS*RCQSHTNMRLPYSP Trigger: TGGGCTGTATGGGAGCCGCATATTTGTGTGGGACTGGCAGCGCCATGAGATTATCCAGACCCTGCAAATGACAGATGGGCTGATACCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090848.10 ENSMUST00000173849.8 |
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| CDS GCA 90 bp | TCGTGCAGGAAACGGATCTCCAGGGGTATCAGCCCATCTGTCATTTaGAGGGTCTGGATAATCTCATGGCGCTGCCAGTCCCACACAAAT | + |
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Preference number: 5 (lower is better) Translates to: SCRKRISRGISPSVI*RVWIISWRCQSHTN Trigger: ATTTGTGTGGGACTGGCAGCGCCATGAGATTATCCAGACCCTGCAAATGACAGATGGGCTGATACCCCTGGAGATCCGTTTCCTGCACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090848.10 ENSMUST00000173849.8 |
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| CDS CCA 90 bp | AAACGGATCTCCAGGGGTATCAGCCCATCTGTCATTTGCAGGGTCTaGATAATCTCATGGCGCTGCCAGTCCCACACAAATATGCGGCTC | + |
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Preference number: 5 (lower is better) Translates to: KRISRGISPSVICRV*IISWRCQSHTNMRL Trigger: GAGCCGCATATTTGTGTGGGACTGGCAGCGCCATGAGATTATCCAGACCCTGCAAATGACAGATGGGCTGATACCCCTGGAGATCCGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090848.10 ENSMUST00000173849.8 |
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| CDS CCA 90 bp | GCCAGGCAGTGGCTGGTGTGCGTATTGCTCACGTTGCACTTGGCTTaGATTTCACTGGCTTCAATGACCTGGCTATACTGGGGAGACTTA | + |
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Preference number: 5 (lower is better) Translates to: ARQWLVCVLLTLHLA*ISLASMTWLYWGDL Trigger: TAAGTCTCCCCAGTATAGCCAGGTCATTGAAGCCAGTGAAATCCAAGCCAAGTGCAACGTGAGCAATACGCACACCAGCCACTGCCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173849.8 |
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| CDS CCA 90 bp | TTGCTCACGTTGCACTTGGCTTGGATTTCACTGGCTTCAATGACCTaGCTATACTGGGGAGACTTAGGGTCTACATCCACAGTGGCCAAA | + |
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Preference number: 5 (lower is better) Translates to: LLTLHLAWISLASMT*LYWGDLGSTSTVAK Trigger: TTTGGCCACTGTGGATGTAGACCCTAAGTCTCCCCAGTATAGCCAGGTCATTGAAGCCAGTGAAATCCAAGCCAAGTGCAACGTGAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173849.8 |
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| CDS-3UTR CAA 90 bp | TATTTCCAGGTGCTTCCAGGAGCTCACTTAAGAAAAGTACAAACAACAAGCAACAGAAGTCGTAGCCCATaGGAGATGCACCCCCAGGCT | + |
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Preference number: 5 (lower is better) Translates to: YFQVLPGAHLRKVQTTSNRSRSP*EMHPQA Trigger: AGCCTGGGGGTGCATCTCCAATGGGCTACGACTTCT...GTTGCTTGTTGTTTGTACTTTTCTTAAGTGAGCTCCTGGAAGCACCTGGAAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090848.10 |
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| CDS-3UTR CAA 90 bp | AGAAAAGTACAAACAACAAGCAACGGTACAGAGATGCTGCTCTACAGATCTCGCTGTGTCTACATCAACTaGAAGCATCACGGAGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: RKVQTTSNGTEMLLYRSRCVYIN*KHHGAF Trigger: GAAGGCTCCGTGATGCTTCAAGTTGATGTAGACACA...GCGAGATCTGTAGAGCAGCATCTCTGTACCGTTGCTTGTTGTTTGTACTTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090848.10 |
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| CDS GCA 72 bp | GCTTGTTGCGTGACTTCGTGCTGTCCCCAAAGCAGCTaGTGCAGGTGTTCCATCCTGAGTGGTGCAGCTCGT | + |
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Preference number: 6 (lower is better) Translates to: ACCVTSCCPQSS*CRCSILSGAAR Trigger: ACGAGCTGCACCACTCAGGATGGAACACCTGCAGCAGCTGCTTTGGGGACAGCACGAAGTCACGCAACAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090848.10 ENSMUST00000131650.9 ENSMUST00000173981.8 ENSMUST00000174223.2 |
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| CDS CCA 72 bp | TGGATGTTGGAGCTGAGGGCACAGCCTACAAAACCCTaGGTGGCACTTGGGTCGTGCAGGAAACGGATCTCC | + |
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Preference number: 6 (lower is better) Translates to: WMLELRAQPTKP*VALGSCRKRIS Trigger: GGAGATCCGTTTCCTGCACGACCCAAGTGCCACCCAGGGTTTTGTAGGCTGTGCCCTCAGCTCCAACATCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090848.10 ENSMUST00000173849.8 |
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| CDS TCA 72 bp | GGAGGACATGAGACCAGGCAGTATCAGCTTGTTGCGTaGCTTCGTGCTGTCCCCAAAGCAGCTGCTGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: GGHETRQYQLVA*LRAVPKAAAAG Trigger: ACCTGCAGCAGCTGCTTTGGGGACAGCACGAAGTCACGCAACAAGCTGATACTGCCTGGTCTCATGTCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090848.10 ENSMUST00000131650.9 ENSMUST00000173981.8 ENSMUST00000174223.2 |
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| CDS TCA 72 bp | CAGAGCCCACATCCACCACGTAGATGCGGGAGGACATaGGACCAGGCAGTATCAGCTTGTTGCGTGACTTCG | + |
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Preference number: 6 (lower is better) Translates to: QSPHPPRRCGRT*DQAVSACCVTS Trigger: CGAAGTCACGCAACAAGCTGATACTGCCTGGTCTCATGTCCTCCCGCATCTACGTGGTGGATGTGGGCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090848.10 ENSMUST00000131650.9 ENSMUST00000173981.8 ENSMUST00000174223.2 |
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| CDS CCA 72 bp | CCCAAGGAAGATCTGCCCAGTGAGGCGGGGCTTCTGTaGGTTAGAGATGTCATACTGCCGAATGTCCCCATG | + |
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Preference number: 6 (lower is better) Translates to: PKEDLPSEAGLL*VRDVILPNVPM Trigger: CATGGGGACATTCGGCAGTATGACATCTCTAACCCACAGAAGCCCCGCCTCACTGGGCAGATCTTCCTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090848.10 ENSMUST00000173849.8 |
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| CDS CAA 90 bp | TTGCTCACGTTGCACTTGGCTTGGATTTCACTGGCTTCAATGACCTaGTGCAACTTCGGGGCACGAGGCTCAGAGCCCACATCCACCACG | + |
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Preference number: 6 (lower is better) Translates to: LLTLHLAWISLASMT*CNFGARGSEPTSTT Trigger: CGTGGTGGATGTGGGCTCTGAGCCTCGTGCCCCGAAGTTGCACAAGGTCATTGAAGCCAGTGAAATCCAAGCCAAGTGCAACGTGAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090848.10 ENSMUST00000173981.8 ENSMUST00000174223.2 |
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| CDS CAA 90 bp | CCACTGGCCAGGCAGTGGCTGGTGTGCGTATTGCTCACGTTGCACTaGGCTTGGATTTCACTGGCTTCAATGACCTGGCTATACTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: PLARQWLVCVLLTLH*AWISLASMTWLYWG Trigger: TCCCCAGTATAGCCAGGTCATTGAAGCCAGTGAAATCCAAGCCAAGTGCAACGTGAGCAATACGCACACCAGCCACTGCCTGGCCAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173849.8 |
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| CDS GCA 72 bp | CACTTGGCTTGGATTTCACTGGCTTCAATGACCTTGTaGAACTTCGGGGCACGAGGCTCAGAGCCCACATCC | + |
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Preference number: 6 (lower is better) Translates to: HLAWISLASMTL*NFGARGSEPTS Trigger: GGATGTGGGCTCTGAGCCTCGTGCCCCGAAGTTGCACAAGGTCATTGAAGCCAGTGAAATCCAAGCCAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090848.10 ENSMUST00000173981.8 ENSMUST00000174223.2 |
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| CDS GCA 72 bp | AATAATCCGGGGCTTCGGTGCCTGTGTTCCGGTAAATaGAGGGCAAGTAGACAATCTCCTCTCGGGGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: NNPGLRCLCSGK*RASRQSPLGVP Trigger: TGGGACCCCGAGAGGAGATTGTCTACTTGCCCTGCATTTACCGGAACACAGGCACCGAAGCCCCGGATTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173981.8 |
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| CDS CAA 90 bp | GTCGTGCAGGAAACGGATCTCCAGGGGTATCAGCCCATCTGTCATTaGCAGGGTCTGGATAATCTCATGGCGCTGCCAGTCCCACACAAA | + |
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Preference number: 6 (lower is better) Translates to: VVQETDLQGYQPICH*QGLDNLMALPVPHK Trigger: TTTGTGTGGGACTGGCAGCGCCATGAGATTATCCAGACCCTGCAAATGACAGATGGGCTGATACCCCTGGAGATCCGTTTCCTGCACGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090848.10 ENSMUST00000173849.8 |
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| CDS CAA 90 bp | GGCCAGGCAGTGGCTGGTGTGCGTATTGCTCACGTTGCACTTGGCTaGGATTTCACTGGCTTCAATGACCTGGCTATACTGGGGAGACTT | + |
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Preference number: 6 (lower is better) Translates to: GQAVAGVRIAHVALG*DFTGFNDLAILGRL Trigger: AAGTCTCCCCAGTATAGCCAGGTCATTGAAGCCAGTGAAATCCAAGCCAAGTGCAACGTGAGCAATACGCACACCAGCCACTGCCTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173849.8 |
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| CDS TCA 72 bp | TCACGTTGCACTTGGCTTGGATTTCACTGGCTTCAATaGCCTTGTGCAACTTCGGGGCACGAGGCTCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: SRCTWLGFHWLQ*PCATSGHEAQS Trigger: GCTCTGAGCCTCGTGCCCCGAAGTTGCACAAGGTCATTGAAGCCAGTGAAATCCAAGCCAAGTGCAACGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090848.10 ENSMUST00000173981.8 ENSMUST00000174223.2 |
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| CDS TCA 72 bp | CTTCCTCATTCTTGTAGAAGCGCTGGATGTTGGAGCTaGGGGCACAGCCTACAAAACCCTGGGTGGCACTTG | + |
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Preference number: 6 (lower is better) Translates to: LPHSCRSAGCWS*GHSLQNPGWHL Trigger: CAAGTGCCACCCAGGGTTTTGTAGGCTGTGCCCTCAGCTCCAACATCCAGCGCTTCTACAAGAATGAGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090848.10 ENSMUST00000173849.8 |
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| CDS GCA 72 bp | AATAATCCGGGGCTTCGGTGCCTGTGTTCCGGTAAATaGAGGGCAAGTAGACAATCTCCTCTCGGGGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: NNPGLRCLCSGK*RASRQSPLGVL Trigger: AAGGACCCCGAGAGGAGATTGTCTACTTGCCCTGCATTTACCGGAACACAGGCACCGAAGCCCCGGATTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090848.10 ENSMUST00000173849.8 |
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| CDS GCA 72 bp | AAACGGATCTCCAGGGGTATCAGCCCATCTGTCATTTaGAGGGTCTGGATAATCTCATGGCGCTGCCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: KRISRGISPSVI*RVWIISWRCQS Trigger: GGACTGGCAGCGCCATGAGATTATCCAGACCCTGCAAATGACAGATGGGCTGATACCCCTGGAGATCCGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090848.10 ENSMUST00000173849.8 |
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| CDS CCA 72 bp | AGCCCATCTGTCATTTGCAGGGTCTGGATAATCTCATaGCGCTGCCAGTCCCACACAAATATGCGGCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: SPSVICRVWIIS*RCQSHTNMRLP Trigger: TGGGAGCCGCATATTTGTGTGGGACTGGCAGCGCCATGAGATTATCCAGACCCTGCAAATGACAGATGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090848.10 ENSMUST00000173849.8 |
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| CDS CCA 72 bp | GGCAACATCCAGCCCTTCACTTTCTTGGAGGGCACTTaGATCACCTTCTCCACTGACCAAGTGCCTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: GNIQPFTFLEGT*ITFSTDQVPSS Trigger: TGAGGAAGGCACTTGGTCAGTGGAGAAGGTGATCCAAGTGCCCTCCAAGAAAGTGAAGGGCTGGATGTTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090848.10 ENSMUST00000173849.8 |
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| CDS CAA 72 bp | GAAACGGATCTCCAGGGGTATCAGCCCATCTGTCATTaGCAGGGTCTGGATAATCTCATGGCGCTGCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: ETDLQGYQPICH*QGLDNLMALPV Trigger: GACTGGCAGCGCCATGAGATTATCCAGACCCTGCAAATGACAGATGGGCTGATACCCCTGGAGATCCGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090848.10 ENSMUST00000173849.8 |
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| CDS CAA 90 bp | GCCAGTGCTGGCCCAAGGGGCTCCTTCCCAAAGTCCACCAGAAAGTaGGGGTTCAACTTCAGCCCTCCATTTACTGTGTCTACATCAACT | + |
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Preference number: 6 (lower is better) Translates to: ASAGPRGSFPKSTRK*GFNFSPPFTVSTST Trigger: AGTTGATGTAGACACAGTAAATGGAGGGCTGAAGTTGAACCCCAACTTTCTGGTGGACTTTGGGAAGGAGCCCCTTGGGCCAGCACTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090848.10 ENSMUST00000173849.8 |
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| CDS CAA 90 bp | ACTTCTCCACTGGCCAGGCAGTGGCTGGTGTGCGTATTGCTCACGTaGCACTTGGCTTGGATTTCACTGGCTTCAATGACCTGGCTATAC | + |
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Preference number: 6 (lower is better) Translates to: TSPLARQWLVCVLLT*HLAWISLASMTWLY Trigger: GTATAGCCAGGTCATTGAAGCCAGTGAAATCCAAGCCAAGTGCAACGTGAGCAATACGCACACCAGCCACTGCCTGGCCAGTGGAGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173849.8 |
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| CDS GCA 72 bp | CTACATCCACAGTGGCCAAATAATCCGGGGCTTCGGTaGCTGTGTTCCGGTAAATGCAGGGCAAGTAGACAA | + |
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Preference number: 6 (lower is better) Translates to: LHPQWPNNPGLR*LCSGKCRASRQ Trigger: TTGTCTACTTGCCCTGCATTTACCGGAACACAGGCACCGAAGCCCCGGATTATTTGGCCACTGTGGATGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090848.10 ENSMUST00000173849.8 ENSMUST00000173981.8 |
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| CDS GCA 72 bp | TCTGTCATTTGCAGGGTCTGGATAATCTCATGGCGCTaGCAGTCCCACACAAATATGCGGCTCCCATACAGC | + |
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Preference number: 6 (lower is better) Translates to: SVICRVWIISWR*QSHTNMRLPYS Trigger: GCTGTATGGGAGCCGCATATTTGTGTGGGACTGGCAGCGCCATGAGATTATCCAGACCCTGCAAATGACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090848.10 ENSMUST00000173849.8 |
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| CDS CAA 72 bp | AGGCAGTGGCTGGTGTGCGTATTGCTCACGTTGCACTaGGCTTGGATTTCACTGGCTTCAATGACCTGGCTA | + |
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Preference number: 6 (lower is better) Translates to: RQWLVCVLLTLH*AWISLASMTWL Trigger: TAGCCAGGTCATTGAAGCCAGTGAAATCCAAGCCAAGTGCAACGTGAGCAATACGCACACCAGCCACTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173849.8 |
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| CDS CCA 72 bp | TGGCTGGTGTGCGTATTGCTCACGTTGCACTTGGCTTaGATTTCACTGGCTTCAATGACCTGGCTATACTGG | + |
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Preference number: 6 (lower is better) Translates to: WLVCVLLTLHLA*ISLASMTWLYW Trigger: CCAGTATAGCCAGGTCATTGAAGCCAGTGAAATCCAAGCCAAGTGCAACGTGAGCAATACGCACACCAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173849.8 |
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| CDS CAA 72 bp | GTGGCTGGTGTGCGTATTGCTCACGTTGCACTTGGCTaGGATTTCACTGGCTTCAATGACCTGGCTATACTG | + |
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Preference number: 6 (lower is better) Translates to: VAGVRIAHVALG*DFTGFNDLAIL Trigger: CAGTATAGCCAGGTCATTGAAGCCAGTGAAATCCAAGCCAAGTGCAACGTGAGCAATACGCACACCAGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173849.8 |
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| CDS CCA 72 bp | GCTTGGATTTCACTGGCTTCAATGACCTGGCTATACTaGGGAGACTTAGGGTCTACATCCACAGTGGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: AWISLASMTWLY*GDLGSTSTVAK Trigger: TTTGGCCACTGTGGATGTAGACCCTAAGTCTCCCCAGTATAGCCAGGTCATTGAAGCCAGTGAAATCCAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173849.8 |
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| CDS CCA 72 bp | TTGCACTTGGCTTGGATTTCACTGGCTTCAATGACCTaGCTATACTGGGGAGACTTAGGGTCTACATCCACA | + |
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Preference number: 6 (lower is better) Translates to: LHLAWISLASMT*LYWGDLGSTST Trigger: TGTGGATGTAGACCCTAAGTCTCCCCAGTATAGCCAGGTCATTGAAGCCAGTGAAATCCAAGCCAAGTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173849.8 |
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| CDS CAA 72 bp | CAACTTCAGCCCTCCATTTACTGTGTCTACATCAACTaGAAGCATCACGGAGCCTTCCCTAATGAGGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: QLQPSIYCVYIN*KHHGAFPNEVR Trigger: CCTGACCTCATTAGGGAAGGCTCCGTGATGCTTCAAGTTGATGTAGACACAGTAAATGGAGGGCTGAAGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090848.10 ENSMUST00000173849.8 |
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| CDS CAA 90 bp | GTTGGGGTTCAACTTCAGCCCTCCATTTACTGTGTCTACATCAACTaGAAGCATCACGGAGCCTTCCCTAATGAGGTCAGGGTAAAACTG | + |
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Preference number: 6 (lower is better) Translates to: VGVQLQPSIYCVYIN*KHHGAFPNEVRVKL Trigger: CAGTTTTACCCTGACCTCATTAGGGAAGGCTCCGTGATGCTTCAAGTTGATGTAGACACAGTAAATGGAGGGCTGAAGTTGAACCCCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090848.10 ENSMUST00000173849.8 |
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