Pregenerated sensors for SELENBP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068874Ensembl transcript IDs: ENSMUST00000090839.12, ENSMUST00000134202.2, ENSMUST00000140757.8
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCAGAACTGCAGTCACCCCCTGGGTAACGAAGCTCGTGAGCCAGTaGTGGCCCAAGGGGCTCCTTCCCAAAGTCCACCAGAAAGTTGGG | + |
|
Preference number: 1 (lower is better) Translates to: VRTAVTPWVTKLVSQ*WPKGLLPKVHQKVG Trigger: CCCAACTTTCTGGTGGACTTTGGGAAGGAGCCCCTTGGGCCAGCACTGGCTCACGAGCTTCGTTACCCAGGGGGTGACTGCAGTTCTGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR GCA 90 bp | GAGCTGAGGGCACAGCCTACAAAACCCTGGGTGGCACTTGGGTCGTaGAGGAAGCGGATCTCCAGGGGTATCAGCCCATCTGTCATTTGC | + |
|
Preference number: 1 (lower is better) Translates to: ELRAQPTKPWVALGS*RKRISRGISPSVIC Trigger: GCAAATGACAGATGGGCTGATACCCCTGGAGATCCGCTTCCTGCACGACCCAAGTGCCACCCAGGGTTTTGTAGGCTGTGCCCTCAGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR CCA 90 bp | GATGTTGGAGCTGAGGGCACAGCCTACAAAACCCTGGGTGGCACTTaGGTCGTGCAGGAAGCGGATCTCCAGGGGTATCAGCCCATCTGT | + |
|
Preference number: 1 (lower is better) Translates to: DVGAEGTAYKTLGGT*VVQEADLQGYQPIC Trigger: ACAGATGGGCTGATACCCCTGGAGATCCGCTTCCTGCACGACCCAAGTGCCACCCAGGGTTTTGTAGGCTGTGCCCTCAGCTCCAACATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR TCA 90 bp | GGGCCTCCAGGAATTCGTTTTCCCTTGACCACTAGGGGCTCCGGCTaGCAGGTTAACTCTTGGTCCTCCAGCACTTGCACAGAGCCTCCT | + |
|
Preference number: 1 (lower is better) Translates to: GPPGIRFPLTTRGSG*QVNSWSSSTCTEPP Trigger: AGGAGGCTCTGTGCAAGTGCTGGAGGACCAAGAGTTAACCTGTCAGCCGGAGCCCCTAGTGGTCAAGGGAAAACGAATTCCTGGAGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR CCA 90 bp | TCCCACACAAATATGCGGCTCCCGTACAGCCCTTTGCCATTACCCTaGAGATCCCCCAAGGTGCTGACCATGACTTCTCCACTGGCCAGG | + |
|
Preference number: 1 (lower is better) Translates to: SHTNMRLPYSPLPLP*RSPKVLTMTSPLAR Trigger: CCTGGCCAGTGGAGAAGTCATGGTCAGCACCTTGGGGGATCTCCAGGGTAATGGCAAAGGGCTGTACGGGAGCCGCATATTTGTGTGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134202.2 |
||
| 3UTR TCA 90 bp | ACCAAGTGCCTTCCGCATTCTTGTAGAAGCGCTGGATGTTGGAGCTaGGGGCACAGCCTACAAAACCCTGGGTGGCACTTGGGTCGTGCA | + |
|
Preference number: 1 (lower is better) Translates to: TKCLPHSCRSAGCWS*GHSLQNPGWHLGRA Trigger: TGCACGACCCAAGTGCCACCCAGGGTTTTGTAGGCTGTGCCCTCAGCTCCAACATCCAGCGCTTCTACAAGAATGCGGAAGGCACTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR GCA 90 bp | GACATTGTGTCGAGGCTGGTACCAGAAGTCGTAGCCCATTGGAGCTaGATCCCCAGGCTTCTCCCATGTCCCTTTCACCTCGAAGGTCTC | + |
|
Preference number: 1 (lower is better) Translates to: DIVSRLVPEVVAHWS*IPRLLPCPFHLEGL Trigger: GAGACCTTCGAGGTGAAAGGGACATGGGAGAAGCCTGGGGATGCAGCTCCAATGGGCTACGACTTCTGGTACCAGCCTCGACACAATGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140757.8 |
||
| 3UTR GCA 90 bp | ATCAGCCCATCTGTCATTTGCAGGGTCTGGATAATCTCATGGCGCTaGCAGTCCCACACAAATATGCGGCTCCCGTACAGCCCAGCCTCC | + |
|
Preference number: 1 (lower is better) Translates to: ISPSVICRVWIISWR*QSHTNMRLPYSPAS Trigger: GGAGGCTGGGCTGTACGGGAGCCGCATATTTGTGTGGGACTGGCAGCGCCATGAGATTATCCAGACCCTGCAAATGACAGATGGGCTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140757.8 |
||
| 3UTR CCA 90 bp | AGATCCCCCAAGGTGCTGACCATGACTTCTCCACTGGCCAGGCAGTaGCTGGTGTGCAAACTGCTCACGTTGCACTTGGCTTGGATTTCA | + |
|
Preference number: 1 (lower is better) Translates to: RSPKVLTMTSPLARQ*LVCKLLTLHLAWIS Trigger: TGAAATCCAAGCCAAGTGCAACGTGAGCAGTTTGCACACCAGCCACTGCCTGGCCAGTGGAGAAGTCATGGTCAGCACCTTGGGGGATCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR CCA 90 bp | AGGGGTATCAGCCCATCTGTCATTTGCAGGGTCTGGATAATCTCATaGCGCTGCCAGTCCCACACAAATATGCGGCTCCCGTACAGCCCT | + |
|
Preference number: 1 (lower is better) Translates to: RGISPSVICRVWIIS*RCQSHTNMRLPYSP Trigger: AGGGCTGTACGGGAGCCGCATATTTGTGTGGGACTGGCAGCGCCATGAGATTATCCAGACCCTGCAAATGACAGATGGGCTGATACCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134202.2 |
||
| 3UTR CCA 90 bp | AGGGGTATCAGCCCATCTGTCATTTGCAGGGTCTGGATAATCTCATaGCGCTGCCAGTCCCACACAAATATGCGGCTCCCGTACAGCCCA | + |
|
Preference number: 1 (lower is better) Translates to: RGISPSVICRVWIIS*RCQSHTNMRLPYSP Trigger: TGGGCTGTACGGGAGCCGCATATTTGTGTGGGACTGGCAGCGCCATGAGATTATCCAGACCCTGCAAATGACAGATGGGCTGATACCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140757.8 |
||
| 3UTR GCA 90 bp | ATCAGCCCATCTGTCATTTGCAGGGTCTGGATAATCTCATGGCGCTaGCAGTCCCACACAAATATGCGGCTCCCGTACAGCCCTTTGCCA | + |
|
Preference number: 1 (lower is better) Translates to: ISPSVICRVWIISWR*QSHTNMRLPYSPLP Trigger: TGGCAAAGGGCTGTACGGGAGCCGCATATTTGTGTGGGACTGGCAGCGCCATGAGATTATCCAGACCCTGCAAATGACAGATGGGCTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134202.2 |
||
| 3UTR GCA 90 bp | TCGTGCAGGAAGCGGATCTCCAGGGGTATCAGCCCATCTGTCATTTaGAGGGTCTGGATAATCTCATGGCGCTGCCAGTCCCACACAAAT | + |
|
Preference number: 1 (lower is better) Translates to: SCRKRISRGISPSVI*RVWIISWRCQSHTN Trigger: ATTTGTGTGGGACTGGCAGCGCCATGAGATTATCCAGACCCTGCAAATGACAGATGGGCTGATACCCCTGGAGATCCGCTTCCTGCACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR CCA 90 bp | AAGCGGATCTCCAGGGGTATCAGCCCATCTGTCATTTGCAGGGTCTaGATAATCTCATGGCGCTGCCAGTCCCACACAAATATGCGGCTC | + |
|
Preference number: 1 (lower is better) Translates to: KRISRGISPSVICRV*IISWRCQSHTNMRL Trigger: GAGCCGCATATTTGTGTGGGACTGGCAGCGCCATGAGATTATCCAGACCCTGCAAATGACAGATGGGCTGATACCCCTGGAGATCCGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGCCTCCTCTAACAATGCTGCCCCCAAGGAAGATCTGCCCAGCGAGGCGGGGCAGTCCCACACAAATATaGGGCTCCCGTACAGCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: EPPLTMLPPRKICPARRGSPTQI*GSRTAQ Trigger: CTGGGCTGTACGGGAGCCGCATATTTGTGTGGGACT...GCCCCGCCTCGCTGGGCAGATCTTCCTTGGGGGCAGCATTGTTAGAGGAGGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140757.8 |
||
| 3UTR-3UTR TCA 90 bp | GCCCCTAGTGCGAGCCTTCAGATCCAGATGTCAGAACTGCAGTCACCCCCTGGGTTGGAGAGTTGGGGCTaGGAGCAGAGTGAAGCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: APSASLQIQMSELQSPPGLESWG*EQSEAR Trigger: CCTGGCTTCACTCTGCTCTCAGCCCCAACTCTCCAA...CCCAGGGGGTGACTGCAGTTCTGACATCTGGATCTGAAGGCTCGCACTAGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR-3UTR GCA 90 bp | AGATCCAGATGTCAGAACTGCAGTCACCCCCTGGGTAACGAAGCTCGTGAGCCACCCCCAAGGAAGATCTaGCCAGCGAGGCGGGGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: RSRCQNCSHPLGNEAREPPPRKI*PARRGF Trigger: GAAGCCCCGCCTCGCTGGGCAGATCTTCCTTGGGGG...TGGCTCACGAGCTTCGTTACCCAGGGGGTGACTGCAGTTCTGACATCTGGATCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTCACCCCCTGGGTAACGAAGCTCGTGAGCCAGTGCTGGCCCAAGGGGCTCCTCATGCAGCCAGTTGCTaGAGTAAAGGAAGCGGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: SHPLGNEAREPVLAQGAPHAASC*SKGSGH Trigger: ATGACCGCTTCCTTTACTTCAGCAACTGGCTGCATG...AGGAGCCCCTTGGGCCAGCACTGGCTCACGAGCTTCGTTACCCAGGGGGTGACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR-3UTR GCA 90 bp | GCACAGCCTACAAAACCCTGGGTGGCACTTGGGTCGTGCAGGAAGCGGATCTCCAGGCAGTGGCTGGTGTaGAAACTGCTCACGTTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: AQPTKPWVALGSCRKRISRQWLV*KLLTLH Trigger: GTGCAACGTGAGCAGTTTGCACACCAGCCACTGCCT...GGAGATCCGCTTCCTGCACGACCCAAGTGCCACCCAGGGTTTTGTAGGCTGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR-3UTR CCA 90 bp | GCACAGCCTACAAAACCCTGGGTGGCACTTGGGTCGTGCAGGAAGCGGATCTCCCCTTTGCCATTACCCTaGAGATCCCCCAAGGTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: AQPTKPWVALGSCRKRISPLPLP*RSPKVL Trigger: CAGCACCTTGGGGGATCTCCAGGGTAATGGCAAAGG...GGAGATCCGCTTCCTGCACGACCCAAGTGCCACCCAGGGTTTTGTAGGCTGTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTACAAAACCCTGGGTGGCACTTGGGTCGTGCAGGAAGCGGATCTCCAGGGGTCTACAAAACCCTGGGTaGCACTTGGGTCGTGCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: PTKPWVALGSCRKRISRGLQNPG*HLGRAG Trigger: TCCTGCACGACCCAAGTGCCACCCAGGGTTTTGTAG...ACCCCTGGAGATCCGCTTCCTGCACGACCCAAGTGCCACCCAGGGTTTTGTAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR CAA 90 bp | TGGCGCTGCCAGTCCCACACAAATATGCGGCTCCCGTACAGCCCTTaGCCATTACCCTGGAGATCCCCCAAGGTGCTGACCATGACTTCT | + |
|
Preference number: 2 (lower is better) Translates to: WRCQSHTNMRLPYSP*PLPWRSPKVLTMTS Trigger: AGAAGTCATGGTCAGCACCTTGGGGGATCTCCAGGGTAATGGCAAAGGGCTGTACGGGAGCCGCATATTTGTGTGGGACTGGCAGCGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134202.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTACAAAACCCTGGGTGGCACTTGGGTCGTGCAGGAAGCGGATCTCCAGGGGTGATCACCTTCTCCACTaGCCAAGTGCCTTCCGCATT | + |
|
Preference number: 2 (lower is better) Translates to: PTKPWVALGSCRKRISRGDHLLH*PSAFRI Trigger: AATGCGGAAGGCACTTGGTCAGTGGAGAAGGTGATC...ACCCCTGGAGATCCGCTTCCTGCACGACCCAAGTGCCACCCAGGGTTTTGTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCTCCAGCACTTGCACAGAGCCTCCTCTAACAATGCTGCCCCCAAGGAAGATCCCACTGGCCAGGCAGTaGCTGGTGTGCAAACTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: SSSTCTEPPLTMLPPRKIPLARQ*LVCKLL Trigger: GAGCAGTTTGCACACCAGCCACTGCCTGGCCAGTGG...GATCTTCCTTGGGGGCAGCATTGTTAGAGGAGGCTCTGTGCAAGTGCTGGAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR-3UTR TCA 90 bp | GCCCCTAGTGCGAGCCTTCAGATCCAGATGTCAGAACTGCAGTCACCCCCTGGGCATGCAGCCAGTTGCTaGAGTAAAGGAAGCGGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: APSASLQIQMSELQSPPGHAASC*SKGSGH Trigger: ATGACCGCTTCCTTTACTTCAGCAACTGGCTGCATG...CCCAGGGGGTGACTGCAGTTCTGACATCTGGATCTGAAGGCTCGCACTAGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGCCGAATGTCCCCATGCAGCCAGTTGCTGAAGTAAAGGAAGCGGTCATCCAGTGGCCAGGCAGTGGCTaGTGTGCAAACTGCTCACGT | + |
|
Preference number: 2 (lower is better) Translates to: LPNVPMQPVAEVKEAVIQWPGSG*CANCSR Trigger: ACGTGAGCAGTTTGCACACCAGCCACTGCCTGGCCA...CTGGATGACCGCTTCCTTTACTTCAGCAACTGGCTGCATGGGGACATTCGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGCCCCTAGTGCGAGCCTTCAGATCCAGATGTCAGAACTGCAGTCACCCCCTGAGTCCACCAGAAAGTTaGGGTTCAACTTCAGCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: GPLVRAFRSRCQNCSHPLSPPES*GSTSAL Trigger: GAGGGCTGAAGTTGAACCCCAACTTTCTGGTGGACT...CAGGGGGTGACTGCAGTTCTGACATCTGGATCTGAAGGCTCGCACTAGGGGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR CAA 90 bp | GTCGTGCAGGAAGCGGATCTCCAGGGGTATCAGCCCATCTGTCATTaGCAGGGTCTGGATAATCTCATGGCGCTGCCAGTCCCACACAAA | + |
|
Preference number: 2 (lower is better) Translates to: VVQEADLQGYQPICH*QGLDNLMALPVPHK Trigger: TTTGTGTGGGACTGGCAGCGCCATGAGATTATCCAGACCCTGCAAATGACAGATGGGCTGATACCCCTGGAGATCCGCTTCCTGCACGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTGGATCACCTTCTCCACTGACCAAGTGCCTTCCGCATTCTTGTAGAAGCGCTGGGCTGAGAGCAGAGTaGAGCCAGGCAGGCTCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LGSPSPLTKCLPHSCRSAGLRAE*SQAGSE Trigger: TTCTGAGCCTGCCTGGCTTCACTCTGCTCTCAGCCC...AGCGCTTCTACAAGAATGCGGAAGGCACTTGGTCAGTGGAGAAGGTGATCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGATCAAACCAGGCATTTCTGGCAACATCCAGCCCTTCACTTTCTTGGAGGGCCCACTGGCCAGGCAGTaGCTGGTGTGCAAACTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: VIKPGISGNIQPFTFLEGPLARQ*LVCKLL Trigger: GAGCAGTTTGCACACCAGCCACTGCCTGGCCAGTGG...GCCCTCCAAGAAAGTGAAGGGCTGGATGTTGCCAGAAATGCCTGGTTTGATCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR-3UTR GCA 90 bp | CCCATGCAGCCAGTTGCTGAAGTAAAGGAAGCGGTCATCCAGGGACAGCAGGATGGCTGGTGTGCAAACTaGTCACGTTGCACTTGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: PMQPVAEVKEAVIQGQQDGWCAN*SRCTWL Trigger: AAGCCAAGTGCAACGTGAGCAGTTTGCACACCAGCC...ATCCTGCTGTCCCTGGATGACCGCTTCCTTTACTTCAGCAACTGGCTGCATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCAGATCCAGATGTCAGAACTGCAGTCACCCCCTGGGTAACGAAGCTCGTGAGAGGCAGTGGCTGGTGTaGAAACTGCTCACGTTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: FRSRCQNCSHPLGNEARERQWLV*KLLTLH Trigger: GTGCAACGTGAGCAGTTTGCACACCAGCCACTGCCT...CTCACGAGCTTCGTTACCCAGGGGGTGACTGCAGTTCTGACATCTGGATCTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR-3UTR CCA 90 bp | AGATCCAGATGTCAGAACTGCAGTCACCCCCTGGGTAACGAAGCTCGTGAGCCAGTCTGGATAATCTCATaGCGCTGCCAGTCCCACACA | + |
|
Preference number: 2 (lower is better) Translates to: RSRCQNCSHPLGNEAREPVWIIS*RCQSHT Trigger: TGTGTGGGACTGGCAGCGCCATGAGATTATCCAGAC...TGGCTCACGAGCTTCGTTACCCAGGGGGTGACTGCAGTTCTGACATCTGGATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR-3UTR CCA 90 bp | AATGTCCCCATGCAGCCAGTTGCTGAAGTAAAGGAAGCGGTCATCCAGGGACAGCTACAAAACCCTGGGTaGCACTTGGGTCGTGCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: NVPMQPVAEVKEAVIQGQLQNPG*HLGRAG Trigger: TCCTGCACGACCCAAGTGCCACCCAGGGTTTTGTAG...CTGTCCCTGGATGACCGCTTCCTTTACTTCAGCAACTGGCTGCATGGGGACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR-3UTR TCA 90 bp | AGAGATGTCATACTGCCGAATGTCCCCATGCAGCCAGTTGCTGAAGTAAAGGAAGGGCTGAGAGCAGAGTaGAGCCAGGCAGGCTCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: RDVILPNVPMQPVAEVKEGLRAE*SQAGSE Trigger: TTCTGAGCCTGCCTGGCTTCACTCTGCTCTCAGCCC...TTCCTTTACTTCAGCAACTGGCTGCATGGGGACATTCGGCAGTATGACATCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGCAGCCAGTTGCTGAAGTAAAGGAAGCGGTCATCCAGGGACAGCAGGATGTCGGCTGGTGTGCAAACTaGTCACGTTGCACTTGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: MQPVAEVKEAVIQGQQDVGWCAN*SRCTWL Trigger: AAGCCAAGTGCAACGTGAGCAGTTTGCACACCAGCC...GACATCCTGCTGTCCCTGGATGACCGCTTCCTTTACTTCAGCAACTGGCTGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR-3UTR CCA 90 bp | TCGGTGATCAAACCAGGCATTTCTGGCAACATCCAGCCCTTCACTTTCTTGGAGTGGCCAGGCAGTGGCTaGTGTGCAAACTGCTCACGT | + |
|
Preference number: 2 (lower is better) Translates to: SVIKPGISGNIQPFTFLEWPGSG*CANCSR Trigger: ACGTGAGCAGTTTGCACACCAGCCACTGCCTGGCCA...CTCCAAGAAAGTGAAGGGCTGGATGTTGCCAGAAATGCCTGGTTTGATCACCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR CAA 90 bp | GTGATCAAACCAGGCATTTCTGGCAACATCCAGCCCTTCACTTTCTaGGAGGGCACTTGGATCACCTTCTCCACTGACCAAGTGCCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: VIKPGISGNIQPFTF*EGTWITFSTDQVPS Trigger: GGAAGGCACTTGGTCAGTGGAGAAGGTGATCCAAGTGCCCTCCAAGAAAGTGAAGGGCTGGATGTTGCCAGAAATGCCTGGTTTGATCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR CAA 90 bp | GCCAGTGCTGGCCCAAGGGGCTCCTTCCCAAAGTCCACCAGAAAGTaGGGGTTCAACTTCAGCCCTCCATTTACTGTGTCTACATCAATT | + |
|
Preference number: 2 (lower is better) Translates to: ASAGPRGSFPKSTRK*GFNFSPPFTVSTSI Trigger: AATTGATGTAGACACAGTAAATGGAGGGCTGAAGTTGAACCCCAACTTTCTGGTGGACTTTGGGAAGGAGCCCCTTGGGCCAGCACTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTTCCAGGAGCTCACTTAAGAAAAGCACAAACAACAAGCAACGGTACAGAGATGGGCTGAGAGCAGAGTaGAGCCAGGCAGGCTCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: ASRSSLKKSTNNKQRYRDGLRAE*SQAGSE Trigger: TTCTGAGCCTGCCTGGCTTCACTCTGCTCTCAGCCC...ATCTCTGTACCGTTGCTTGTTGTTTGTGCTTTTCTTAAGTGAGCTCCTGGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090839.12 ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR-3UTR TCA 90 bp | CCAGGAGCTCACTTAAGAAAAGCACAAACAACAAGCAACGGTACAGAGATGCTGTTGGAGAGTTGGGGCTaGGAGCAGAGTGAAGCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: PGAHLRKAQTTSNGTEMLLESWG*EQSEAR Trigger: CCTGGCTTCACTCTGCTCTCAGCCCCAACTCTCCAA...CAGCATCTCTGTACCGTTGCTTGTTGTTTGTGCTTTTCTTAAGTGAGCTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090839.12 ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGATCAAACCAGGCATTTCTGGCAACATCCAGCCCTTCACTTTCTTGGAGGGCAGCCCTTCACTTTCTTaGAGGGCACTTGGATCACCT | + |
|
Preference number: 2 (lower is better) Translates to: VIKPGISGNIQPFTFLEGSPSLS*RALGSP Trigger: AGGTGATCCAAGTGCCCTCCAAGAAAGTGAAGGGCT...GCCCTCCAAGAAAGTGAAGGGCTGGATGTTGCCAGAAATGCCTGGTTTGATCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTTTCTTGGAGGGCACTTGGATCACCTTCTCCACTGACCAAGTGCCTTCCGCAATAATCTCATGGCGCTaGCAGTCCCACACAAATATG | + |
|
Preference number: 2 (lower is better) Translates to: TFLEGTWITFSTDQVPSAIISWR*QSHTNM Trigger: CATATTTGTGTGGGACTGGCAGCGCCATGAGATTAT...TGCGGAAGGCACTTGGTCAGTGGAGAAGGTGATCCAAGTGCCCTCCAAGAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCAGATCCAGATGTCAGAACTGCAGTCACCCCCTGGGTAACGAAGCTCGTGAGAGCCCATCTGTCATTTaGAGGGTCTGGATAATCTCA | + |
|
Preference number: 2 (lower is better) Translates to: FRSRCQNCSHPLGNEARESPSVI*RVWIIS Trigger: TGAGATTATCCAGACCCTGCAAATGACAGATGGGCT...CTCACGAGCTTCGTTACCCAGGGGGTGACTGCAGTTCTGACATCTGGATCTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR-3UTR GCA 90 bp | GATCAAACCAGGCATTTCTGGCAACATCCAGCCCTTCACTTTCTTGGAGGGCACTTAGAGATGTCATACTaGCGAATGTCCCCATGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: DQTRHFWQHPALHFLGGHLEMSY*RMSPCS Trigger: GCTGCATGGGGACATTCGGCAGTATGACATCTCTAA...GTGCCCTCCAAGAAAGTGAAGGGCTGGATGTTGCCAGAAATGCCTGGTTTGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCTCACTTAAGAAAAGCACAAACAACAAGCAACGGTACAGAGATGCTGCTCTAGCTTGCCATCTAAGCTaGGCTGGATCATCTGAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: SSLKKSTNNKQRYRDAALACHLS*AGSSEG Trigger: GCCCTCAGATGATCCAGCTCAGCTTAGATGGCAAGC...TAGAGCAGCATCTCTGTACCGTTGCTTGTTGTTTGTGCTTTTCTTAAGTGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTGTCTACATCAATTTGAAGCATCATGGAGCCTTCCCTAATGAGGTCAGGGTAGTCTGGATAATCTCATaGCGCTGCCAGTCCCACACA | + |
|
Preference number: 2 (lower is better) Translates to: CVYINLKHHGAFPNEVRVVWIIS*RCQSHT Trigger: TGTGTGGGACTGGCAGCGCCATGAGATTATCCAGAC...TACCCTGACCTCATTAGGGAAGGCTCCATGATGCTTCAAATTGATGTAGACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR CAA 90 bp | GTTGGGGTTCAACTTCAGCCCTCCATTTACTGTGTCTACATCAATTaGAAGCATCATGGAGCCTTCCCTAATGAGGTCAGGGTAAAACTG | + |
|
Preference number: 2 (lower is better) Translates to: VGVQLQPSIYCVYIN*KHHGAFPNEVRVKL Trigger: CAGTTTTACCCTGACCTCATTAGGGAAGGCTCCATGATGCTTCAAATTGATGTAGACACAGTAAATGGAGGGCTGAAGTTGAACCCCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCTCACTTAAGAAAAGCACAAACAACAAGCAACGGTACAGAGATGCTGCTCTAGTCATTTGCAGGGTCTaGATAATCTCATGGCGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: SSLKKSTNNKQRYRDAALVICRV*IISWRC Trigger: GCAGCGCCATGAGATTATCCAGACCCTGCAAATGAC...TAGAGCAGCATCTCTGTACCGTTGCTTGTTGTTTGTGCTTTTCTTAAGTGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR GCA 72 bp | GCAGTCACCCCCTGGGTAACGAAGCTCGTGAGCCAGTaGTGGCCCAAGGGGCTCCTTCCCAAAGTCCACCAG | + |
|
Preference number: 3 (lower is better) Translates to: AVTPWVTKLVSQ*WPKGLLPKVHQ Trigger: CTGGTGGACTTTGGGAAGGAGCCCCTTGGGCCAGCACTGGCTCACGAGCTTCGTTACCCAGGGGGTGACTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR CCA 72 bp | GTCACCCCCTGGGTAACGAAGCTCGTGAGCCAGTGCTaGCCCAAGGGGCTCCTTCCCAAAGTCCACCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: VTPWVTKLVSQC*PKGLLPKVHQK Trigger: TTTCTGGTGGACTTTGGGAAGGAGCCCCTTGGGCCAGCACTGGCTCACGAGCTTCGTTACCCAGGGGGTGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR GCA 72 bp | GCACAGCCTACAAAACCCTGGGTGGCACTTGGGTCGTaGAGGAAGCGGATCTCCAGGGGTATCAGCCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: AQPTKPWVALGS*RKRISRGISPS Trigger: AGATGGGCTGATACCCCTGGAGATCCGCTTCCTGCACGACCCAAGTGCCACCCAGGGTTTTGTAGGCTGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR GCA 72 bp | GAGCCTCCTCTAACAATGCTGCCCCCAAGGAAGATCTaGCCAGCGAGGCGGGGCTTCTGTGGGTTAGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: EPPLTMLPPRKI*PARRGFCGLEM Trigger: CATCTCTAACCCACAGAAGCCCCGCCTCGCTGGGCAGATCTTCCTTGGGGGCAGCATTGTTAGAGGAGGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR GCA 72 bp | CCCCTAGTGCGAGCCTTCAGATCCAGATGTCAGAACTaGAGTCACCCCCTGGGTAACGAAGCTCGTGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: PLVRAFRSRCQN*SHPLGNEAREP Trigger: TGGCTCACGAGCTTCGTTACCCAGGGGGTGACTGCAGTTCTGACATCTGGATCTGAAGGCTCGCACTAGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR GCA 72 bp | TCGAGGCTGGTACCAGAAGTCGTAGCCCATTGGAGCTaGATCCCCAGGCTTCTCCCATGTCCCTTTCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: SRLVPEVVAHWS*IPRLLPCPFHL Trigger: GAGGTGAAAGGGACATGGGAGAAGCCTGGGGATGCAGCTCCAATGGGCTACGACTTCTGGTACCAGCCTCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140757.8 |
||
| 3UTR CCA 72 bp | CCCAAGGAAGATCTGCCCAGCGAGGCGGGGCTTCTGTaGGTTAGAGATGTCATACTGCCGAATGTCCCCATG | + |
|
Preference number: 3 (lower is better) Translates to: PKEDLPSEAGLL*VRDVILPNVPM Trigger: CATGGGGACATTCGGCAGTATGACATCTCTAACCCACAGAAGCCCCGCCTCGCTGGGCAGATCTTCCTTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR CCA 72 bp | CCTTCAGATCCAGATGTCAGAACTGCAGTCACCCCCTaGGTAACGAAGCTCGTGAGCCAGTGCTGGCCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: PSDPDVRTAVTP*VTKLVSQCWPK Trigger: CTTGGGCCAGCACTGGCTCACGAGCTTCGTTACCCAGGGGGTGACTGCAGTTCTGACATCTGGATCTGAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR CCA 72 bp | AAGGTGCTGACCATGACTTCTCCACTGGCCAGGCAGTaGCTGGTGTGCAAACTGCTCACGTTGCACTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: KVLTMTSPLARQ*LVCKLLTLHLA Trigger: AGCCAAGTGCAACGTGAGCAGTTTGCACACCAGCCACTGCCTGGCCAGTGGAGAAGTCATGGTCAGCACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR TCA 72 bp | CTTCCGCATTCTTGTAGAAGCGCTGGATGTTGGAGCTaGGGGCACAGCCTACAAAACCCTGGGTGGCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: LPHSCRSAGCWS*GHSLQNPGWHL Trigger: CAAGTGCCACCCAGGGTTTTGTAGGCTGTGCCCTCAGCTCCAACATCCAGCGCTTCTACAAGAATGCGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR GCA 72 bp | AAGCGGATCTCCAGGGGTATCAGCCCATCTGTCATTTaGAGGGTCTGGATAATCTCATGGCGCTGCCAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: KRISRGISPSVI*RVWIISWRCQS Trigger: GGACTGGCAGCGCCATGAGATTATCCAGACCCTGCAAATGACAGATGGGCTGATACCCCTGGAGATCCGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR CCA 72 bp | AATATGCGGCTCCCGTACAGCCCTTTGCCATTACCCTaGAGATCCCCCAAGGTGCTGACCATGACTTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: NMRLPYSPLPLP*RSPKVLTMTSP Trigger: TGGAGAAGTCATGGTCAGCACCTTGGGGGATCTCCAGGGTAATGGCAAAGGGCTGTACGGGAGCCGCATATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134202.2 |
||
| 3UTR CCA 72 bp | AGCCCATCTGTCATTTGCAGGGTCTGGATAATCTCATaGCGCTGCCAGTCCCACACAAATATGCGGCTCCCG | + |
|
Preference number: 3 (lower is better) Translates to: SPSVICRVWIIS*RCQSHTNMRLP Trigger: CGGGAGCCGCATATTTGTGTGGGACTGGCAGCGCCATGAGATTATCCAGACCCTGCAAATGACAGATGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR CCA 72 bp | GGCAACATCCAGCCCTTCACTTTCTTGGAGGGCACTTaGATCACCTTCTCCACTGACCAAGTGCCTTCCGCA | + |
|
Preference number: 3 (lower is better) Translates to: GNIQPFTFLEGT*ITFSTDQVPSA Trigger: TGCGGAAGGCACTTGGTCAGTGGAGAAGGTGATCCAAGTGCCCTCCAAGAAAGTGAAGGGCTGGATGTTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR-3UTR CAA 90 bp | GATAATCTCATGGCGCTGCCAGTCCCACACAAATATGCGGCTCCCGTACAGCCCCAGCCCATCTGTCATTaGCAGGGTCTGGATAATCTC | + |
|
Preference number: 3 (lower is better) Translates to: DNLMALPVPHKYAAPVQPQPICH*QGLDNL Trigger: GAGATTATCCAGACCCTGCAAATGACAGATGGGCTG...GGGCTGTACGGGAGCCGCATATTTGTGTGGGACTGGCAGCGCCATGAGATTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR TCA 72 bp | AAAGGAAGCGGTCATCCAGGGACAGCAGGATGTCGGTaGTCAAACCAGGCATTTCTGGCAACATCCAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: KGSGHPGTAGCR*SNQAFLATSSP Trigger: AGGGCTGGATGTTGCCAGAAATGCCTGGTTTGATCACCGACATCCTGCTGTCCCTGGATGACCGCTTCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR TCA 72 bp | TGTCATACTGCCGAATGTCCCCATGCAGCCAGTTGCTaGAGTAAAGGAAGCGGTCATCCAGGGACAGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: CHTAECPHAASC*SKGSGHPGTAG Trigger: TCCTGCTGTCCCTGGATGACCGCTTCCTTTACTTCAGCAACTGGCTGCATGGGGACATTCGGCAGTATGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR TCA 72 bp | GGAATTCGTTTTCCCTTGACCACTAGGGGCTCCGGCTaGCAGGTTAACTCTTGGTCCTCCAGCACTTGCACA | + |
|
Preference number: 3 (lower is better) Translates to: GIRFPLTTRGSG*QVNSWSSSTCT Trigger: TGTGCAAGTGCTGGAGGACCAAGAGTTAACCTGTCAGCCGGAGCCCCTAGTGGTCAAGGGAAAACGAATTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR GCA 72 bp | TCTGTCATTTGCAGGGTCTGGATAATCTCATGGCGCTaGCAGTCCCACACAAATATGCGGCTCCCGTACAGC | + |
|
Preference number: 3 (lower is better) Translates to: SVICRVWIISWR*QSHTNMRLPYS Trigger: GCTGTACGGGAGCCGCATATTTGTGTGGGACTGGCAGCGCCATGAGATTATCCAGACCCTGCAAATGACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR GCA 72 bp | TGGAGGGCACTTGGATCACCTTCTCCACTGACCAAGTaGCTTCCGCATTCTTGTAGAAGCGCTGGATGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: WRALGSPSPLTK*LPHSCRSAGCW Trigger: CCAACATCCAGCGCTTCTACAAGAATGCGGAAGGCACTTGGTCAGTGGAGAAGGTGATCCAAGTGCCCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR CCA 72 bp | GGACAGCAGGATGTCGGTGATCAAACCAGGCATTTCTaGCAACATCCAGCCCTTCACTTTCTTGGAGGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: GQQDVGDQTRHF*QHPALHFLGGH Trigger: GTGCCCTCCAAGAAAGTGAAGGGCTGGATGTTGCCAGAAATGCCTGGTTTGATCACCGACATCCTGCTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCGAATGTCCCCATGCAGCCAGTTGCTGAAGTAAAGGAAGCGGTCATCCAGCAGCCCATCTGTCATTaGCAGGGTCTGGATAATCTC | + |
|
Preference number: 3 (lower is better) Translates to: LPNVPMQPVAEVKEAVIQQPICH*QGLDNL Trigger: GAGATTATCCAGACCCTGCAAATGACAGATGGGCTG...CTGGATGACCGCTTCCTTTACTTCAGCAACTGGCTGCATGGGGACATTCGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR TCA 72 bp | CACTTTCTTGGAGGGCACTTGGATCACCTTCTCCACTaGCCAAGTGCCTTCCGCATTCTTGTAGAAGCGCTG | + |
|
Preference number: 3 (lower is better) Translates to: HFLGGHLDHLLH*PSAFRILVEAL Trigger: CAGCGCTTCTACAAGAATGCGGAAGGCACTTGGTCAGTGGAGAAGGTGATCCAAGTGCCCTCCAAGAAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR CCA 72 bp | CAGGCATTTCTGGCAACATCCAGCCCTTCACTTTCTTaGAGGGCACTTGGATCACCTTCTCCACTGACCAAG | + |
|
Preference number: 3 (lower is better) Translates to: QAFLATSSPSLS*RALGSPSPLTK Trigger: CTTGGTCAGTGGAGAAGGTGATCCAAGTGCCCTCCAAGAAAGTGAAGGGCTGGATGTTGCCAGAAATGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR CCA 72 bp | GCCCAAGGGGCTCCTTCCCAAAGTCCACCAGAAAGTTaGGGTTCAACTTCAGCCCTCCATTTACTGTGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: AQGAPSQSPPES*GSTSALHLLCL Trigger: TAGACACAGTAAATGGAGGGCTGAAGTTGAACCCCAACTTTCTGGTGGACTTTGGGAAGGAGCCCCTTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCAGTTGCTGAAGTAAAGGAAGCGGTCATCCAGGGACAGCAGGATGTCGGTTGCAAACTGCTCACGTaGCACTTGGCTTGGATTTCA | + |
|
Preference number: 3 (lower is better) Translates to: QPVAEVKEAVIQGQQDVGCKLLT*HLAWIS Trigger: TGAAATCCAAGCCAAGTGCAACGTGAGCAGTTTGCA...ACCGACATCCTGCTGTCCCTGGATGACCGCTTCCTTTACTTCAGCAACTGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGTGCTGACCATGACATTGTGTCGAGGCTGGTACCAGAAGTCGTAGCCCATTGCAAACTGCTCACGTaGCACTTGGCTTGGATTTCA | + |
|
Preference number: 3 (lower is better) Translates to: FSADHDIVSRLVPEVVAHCKLLT*HLAWIS Trigger: TGAAATCCAAGCCAAGTGCAACGTGAGCAGTTTGCA...ATGGGCTACGACTTCTGGTACCAGCCTCGACACAATGTCATGGTCAGCACTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140757.8 |
||
| CDS-3UTR TCA 90 bp | GCCTACAAAACCCTGGGTGGCACTTGGGTCGTGCAGGAAGCGGATCTCCAGGGGGCAGGTGTTCCATCCTaGGTGGTGCAGCTCGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AYKTLGGTWVVQEADLQGAGVPS*VVQLVL Trigger: AAGGACGAGCTGCACCACTCAGGATGGAACACCTGC...CCCCTGGAGATCCGCTTCCTGCACGACCCAAGTGCCACCCAGGGTTTTGTAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| CDS-3UTR GCA 90 bp | GATGCTGCTCTACAGATCTCGCTGGTCTCAGAGTGGCCTTGGAGAGTTGGGGCTCCCCCAAGGAAGATCTaGCCAGCGAGGCGGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DAALQISLVSEWPWRVGAPPRKI*PARRGF Trigger: GAAGCCCCGCCTCGCTGGGCAGATCTTCCTTGGGGG...AGCCCCAACTCTCCAAGGCCACTCTGAGACCAGCGAGATCTGTAGAGCAGCATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS-3UTR TCA 90 bp | GAGTGGCCTTGGAGAGTTGGGGCTGAGAGCAGAGTGAAGCCAGGCAGGCTCAGATGGGCAACCTGTGGATaGCCTGGCTATACTGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EWPWRVGAESRVKPGRLRWATCG*PGYTGE Trigger: CTCCCCAGTATAGCCAGGTCATCCACAGGTTGCCCA...TCTGAGCCTGCCTGGCTTCACTCTGCTCTCAGCCCCAACTCTCCAAGGCCACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090839.12 ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| CDS-3UTR CCA 90 bp | CTCCACTGGCCAGGCAGTGGCTGGTGTGCAAACTGCTCACGTTGCACTTGGCTTCTCGGGGTCCTTTCATaGCCTCCAGAGGGGTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LHWPGSGWCANCSRCTWLLGVLS*PPEGWS Trigger: ACTCCACCCCTCTGGAGGCCATGAAAGGACCCCGAG...AAGCCAAGTGCAACGTGAGCAGTTTGCACACCAGCCACTGCCTGGCCAGTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| CDS-3UTR TCA 90 bp | GATGCTGCTCTACAGATCTCGCTGGTCTCAGAGTGGCCTTGGAGAGTTGGGGCTAGCCCAGCCTCCACATaGGCCGGGTTGAAGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: DAALQISLVSEWPWRVGASPAST*AGLKPS Trigger: AGATGGCTTCAACCCGGCTCATGTGGAGGCTGGGCT...AGCCCCAACTCTCCAAGGCCACTCTGAGACCAGCGAGATCTGTAGAGCAGCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS-3UTR GCA 90 bp | GAGTGGCCTTGGAGAGTTGGGGCTGAGAGCAGAGTGAAGCCAGGCAGGCTCAGAAGTCCCACACAAATATaGGGCTCCCGTACAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EWPWRVGAESRVKPGRLRSPTQI*GSRTAQ Trigger: CTGGGCTGTACGGGAGCCGCATATTTGTGTGGGACT...TCTGAGCCTGCCTGGCTTCACTCTGCTCTCAGCCCCAACTCTCCAAGGCCACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS-3UTR CCA 90 bp | CTCTACAGATCTCGCTGGTCTCAGAGTGGCCTTGGAGAGTTGGGGCTGAGAGCACTCGGGGTCCTTTCATaGCCTCCAGAGGGGTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LYRSRWSQSGLGELGLRALGVLS*PPEGWS Trigger: ACTCCACCCCTCTGGAGGCCATGAAAGGACCCCGAG...TGCTCTCAGCCCCAACTCTCCAAGGCCACTCTGAGACCAGCGAGATCTGTAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000090839.12 ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTACAGATCTCGCTGGTCTCAGAGTGGCCTTGGAGAGTTGGGGCTGAGAGCTGGCCAGGCAGTGGCTaGTGTGCAAACTGCTCACGT | + |
|
Preference number: 4 (lower is better) Translates to: ALQISLVSEWPWRVGAESWPGSG*CANCSR Trigger: ACGTGAGCAGTTTGCACACCAGCCACTGCCTGGCCA...GCTCTCAGCCCCAACTCTCCAAGGCCACTCTGAGACCAGCGAGATCTGTAGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS-3UTR TCA 90 bp | CAGCCCTTTGCCATTACCCTGGAGATCCCCCAAGGTGCTGACCATGACTTCTCCTGGGCAACCTGTGGATaGCCTGGCTATACTGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QPFAITLEIPQGADHDFSWATCG*PGYTGE Trigger: CTCCCCAGTATAGCCAGGTCATCCACAGGTTGCCCA...GGAGAAGTCATGGTCAGCACCTTGGGGGATCTCCAGGGTAATGGCAAAGGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134202.2 |
||
| CDS-3UTR GCA 90 bp | GCTCTACAGATCTCGCTGGTCTCAGAGTGGCCTTGGAGAGTTGGGGCTGAGAGCCCCCAAAGCAGCTGCTaGAGGTGTTCCATCCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ALQISLVSEWPWRVGAESPQSSC*RCSILS Trigger: ACTCAGGATGGAACACCTGCAGCAGCTGCTTTGGGG...GCTCTCAGCCCCAACTCTCCAAGGCCACTCTGAGACCAGCGAGATCTGTAGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090839.12 ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| CDS-3UTR GCA 90 bp | ATGTTGGAGCTGAGGGCACAGCCTACAAAACCCTGGGTGGCACTTGGGTCGTGCTGTCCCCAAAGCAGCTaGTGCAGGTGTTCCATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MLELRAQPTKPWVALGSCCPQSS*CRCSIL Trigger: CAGGATGGAACACCTGCAGCAGCTGCTTTGGGGACA...GCACGACCCAAGTGCCACCCAGGGTTTTGTAGGCTGTGCCCTCAGCTCCAACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCTCCTCTAACAATGCTGCCCCCAAGGAAGATCTGCCCAGCGAGGCGGGGCAGGGGTGGAGTAACCTaGACCACACTTTGTGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: EPPLTMLPPRKICPARRGRGGVT*TTLCAF Trigger: AAATGCACAAAGTGTGGTCCAGGTTACTCCACCCCT...GCCCCGCCTCGCTGGGCAGATCTTCCTTGGGGGCAGCATTGTTAGAGGAGGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| CDS-3UTR CCA 90 bp | CTCTACAGATCTCGCTGGTCTCAGAGTGGCCTTGGAGAGTTGGGGCTGAGAGCATGGCCTCCAGAGGGGTaGAGTAACCTGGACCACACT | + |
|
Preference number: 4 (lower is better) Translates to: LYRSRWSQSGLGELGLRAWPPEG*SNLDHT Trigger: AGTGTGGTCCAGGTTACTCCACCCCTCTGGAGGCCA...TGCTCTCAGCCCCAACTCTCCAAGGCCACTCTGAGACCAGCGAGATCTGTAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090839.12 ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR CAA 72 bp | CAGTCCCACACAAATATGCGGCTCCCGTACAGCCCTTaGCCATTACCCTGGAGATCCCCCAAGGTGCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: QSHTNMRLPYSP*PLPWRSPKVLT Trigger: GGTCAGCACCTTGGGGGATCTCCAGGGTAATGGCAAAGGGCTGTACGGGAGCCGCATATTTGTGTGGGACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134202.2 |
||
| CDS-3UTR TCA 90 bp | ATGCTGCTCTACAGATCTCGCTGGTCTCAGAGTGGCCTTGGAGAGTTGGGGCTGAGATGCGGGAGGAGATaGGACCAGGCAGTATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: MLLYRSRWSQSGLGELGLRCGRR*DQAVSA Trigger: AGCTGATACTGCCTGGTCTCATCTCCTCCCGCATCT...CAGCCCCAACTCTCCAAGGCCACTCTGAGACCAGCGAGATCTGTAGAGCAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090839.12 ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| CDS-3UTR TCA 90 bp | GTCTCAGAGTGGCCTTGGAGAGTTGGGGCTGAGAGCAGAGTGAAGCCAGGCAGGTTTCACTGGCTTCAATaGCCTTGTGCAACTTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VSEWPWRVGAESRVKPGRFHWLQ*PCATSG Trigger: CCCCGAAGTTGCACAAGGTCATTGAAGCCAGTGAAA...CCTGCCTGGCTTCACTCTGCTCTCAGCCCCAACTCTCCAAGGCCACTCTGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS-3UTR GCA 90 bp | GTGCAGGAAGCGGATCTCCAGGGGTATCAGCCCATCTGTCATTTGCAGGGTCTGTGTCCCCAAAGCAGCTaGTGCAGGTGTTCCATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VQEADLQGYQPICHLQGLCPQSS*CRCSIL Trigger: CAGGATGGAACACCTGCAGCAGCTGCTTTGGGGACA...CAGACCCTGCAAATGACAGATGGGCTGATACCCCTGGAGATCCGCTTCCTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| CDS-3UTR GCA 90 bp | CTCTACAGATCTCGCTGGTCTCAGAGTGGCCTTGGAGAGTTGGGGCTGAGAGCATGTTGCGTGACTTCGTaGTGTCCCCAAAGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LYRSRWSQSGLGELGLRACCVTS*CPQSSC Trigger: GCAGCTGCTTTGGGGACAGCACGAAGTCACGCAACA...TGCTCTCAGCCCCAACTCTCCAAGGCCACTCTGAGACCAGCGAGATCTGTAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090839.12 ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| CDS-3UTR GCA 90 bp | ATGCTGCTCTACAGATCTCGCTGGTCTCAGAGTGGCCTTGGAGAGTTGGGGCTGAGGCAGTGGCTGGTGTaGAAACTGCTCACGTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: MLLYRSRWSQSGLGELGLRQWLV*KLLTLH Trigger: GTGCAACGTGAGCAGTTTGCACACCAGCCACTGCCT...CAGCCCCAACTCTCCAAGGCCACTCTGAGACCAGCGAGATCTGTAGAGCAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS-3UTR TCA 90 bp | GAGATGCTGCTCTACAGATCTCGCTGGTCTCAGAGTGGCCTTGGAGAGTTGGGGGATCACCTTCTCCACTaGCCAAGTGCCTTCCGCATT | + |
|
Preference number: 4 (lower is better) Translates to: EMLLYRSRWSQSGLGELGDHLLH*PSAFRI Trigger: AATGCGGAAGGCACTTGGTCAGTGGAGAAGGTGATC...CCCCAACTCTCCAAGGCCACTCTGAGACCAGCGAGATCTGTAGAGCAGCATCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS-3UTR GCA 90 bp | GAGTGGCCTTGGAGAGTTGGGGCTGAGAGCAGAGTGAAGCCAGGCAGGCTCAGATTAGAGATGTCATACTaGCGAATGTCCCCATGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EWPWRVGAESRVKPGRLRLEMSY*RMSPCS Trigger: GCTGCATGGGGACATTCGGCAGTATGACATCTCTAA...TCTGAGCCTGCCTGGCTTCACTCTGCTCTCAGCCCCAACTCTCCAAGGCCACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS-3UTR CCA 90 bp | CTTGGATCACCTTCTCCACTGACCAAGTGCCTTCCGCATTCTTGTAGAAGCGCTCTCGGGGTCCTTTCATaGCCTCCAGAGGGGTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGSPSPLTKCLPHSCRSALGVLS*PPEGWS Trigger: ACTCCACCCCTCTGGAGGCCATGAAAGGACCCCGAG...AGCGCTTCTACAAGAATGCGGAAGGCACTTGGTCAGTGGAGAAGGTGATCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR CAA 72 bp | GAAGCGGATCTCCAGGGGTATCAGCCCATCTGTCATTaGCAGGGTCTGGATAATCTCATGGCGCTGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: EADLQGYQPICH*QGLDNLMALPV Trigger: GACTGGCAGCGCCATGAGATTATCCAGACCCTGCAAATGACAGATGGGCTGATACCCCTGGAGATCCGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| CDS-3UTR TCA 90 bp | ATGCTGCTCTACAGATCTCGCTGGTCTCAGAGTGGCCTTGGAGAGTTGGGGCTGCATGCAGCCAGTTGCTaGAGTAAAGGAAGCGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: MLLYRSRWSQSGLGELGLHAASC*SKGSGH Trigger: ATGACCGCTTCCTTTACTTCAGCAACTGGCTGCATG...CAGCCCCAACTCTCCAAGGCCACTCTGAGACCAGCGAGATCTGTAGAGCAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS-3UTR GCA 90 bp | AATGTCCCCATGCAGCCAGTTGCTGAAGTAAAGGAAGCGGTCATCCAGGGACAGTGTTGCGTGACTTCGTaGTGTCCCCAAAGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NVPMQPVAEVKEAVIQGQCCVTS*CPQSSC Trigger: GCAGCTGCTTTGGGGACAGCACGAAGTCACGCAACA...CTGTCCCTGGATGACCGCTTCCTTTACTTCAGCAACTGGCTGCATGGGGACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGGTTAGAGATGTCATACTGCCGAATGTCCCCATGCAGCCAGTTGCTGAAGTGGCCTCCAGAGGGGTaGAGTAACCTGGACCACACT | + |
|
Preference number: 4 (lower is better) Translates to: CGLEMSYCRMSPCSQLLKWPPEG*SNLDHT Trigger: AGTGTGGTCCAGGTTACTCCACCCCTCTGGAGGCCA...CTTCAGCAACTGGCTGCATGGGGACATTCGGCAGTATGACATCTCTAACCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR CAA 72 bp | GGCCCAAGGGGCTCCTTCCCAAAGTCCACCAGAAAGTaGGGGTTCAACTTCAGCCCTCCATTTACTGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GPRGSFPKSTRK*GFNFSPPFTVS Trigger: AGACACAGTAAATGGAGGGCTGAAGTTGAACCCCAACTTTCTGGTGGACTTTGGGAAGGAGCCCCTTGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| CDS-3UTR TCA 90 bp | CTGTGGGTTAGAGATGTCATACTGCCGAATGTCCCCATGCAGCCAGTTGCTGAAAGATGCGGGAGGAGATaGGACCAGGCAGTATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LWVRDVILPNVPMQPVAERCGRR*DQAVSA Trigger: AGCTGATACTGCCTGGTCTCATCTCCTCCCGCATCT...TTCAGCAACTGGCTGCATGGGGACATTCGGCAGTATGACATCTCTAACCCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| CDS-3UTR GCA 90 bp | TTCACTTTCTTGGAGGGCACTTGGATCACCTTCTCCACTGACCAAGTGCCTTCCCCCCAAAGCAGCTGCTaGAGGTGTTCCATCCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FTFLEGTWITFSTDQVPSPQSSC*RCSILS Trigger: ACTCAGGATGGAACACCTGCAGCAGCTGCTTTGGGG...GGAAGGCACTTGGTCAGTGGAGAAGGTGATCCAAGTGCCCTCCAAGAAAGTGAA 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| CDS-3UTR CCA 90 bp | GATGCTGCTCTACAGATCTCGCTGGTCTCAGAGTGGCCTTGGAGAGTTGGGGCTAGGGGTGGAGTAACCTaGACCACACTTTGTGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: DAALQISLVSEWPWRVGARGGVT*TTLCAF Trigger: AAATGCACAAAGTGTGGTCCAGGTTACTCCACCCCT...AGCCCCAACTCTCCAAGGCCACTCTGAGACCAGCGAGATCTGTAGAGCAGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090839.12 ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| 3UTR CAA 72 bp | CCAGGCATTTCTGGCAACATCCAGCCCTTCACTTTCTaGGAGGGCACTTGGATCACCTTCTCCACTGACCAA | + |
|
Preference number: 4 (lower is better) Translates to: PGISGNIQPFTF*EGTWITFSTDQ Trigger: TTGGTCAGTGGAGAAGGTGATCCAAGTGCCCTCCAAGAAAGTGAAGGGCTGGATGTTGCCAGAAATGCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| CDS-3UTR TCA 90 bp | CCATCTTTGAAGACATTGGGAGCTGCCCATTCAGTGCTGACCATGACATTGTGTTGGGCAACCTGTGGATaGCCTGGCTATACTGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PSLKTLGAAHSVLTMTLCWATCG*PGYTGE Trigger: CTCCCCAGTATAGCCAGGTCATCCACAGGTTGCCCA...ACACAATGTCATGGTCAGCACTGAATGGGCAGCTCCCAATGTCTTCAAAGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140757.8 |
||
| CDS-3UTR GCA 90 bp | GATGCTGCTCTACAGATCTCGCTGGTCTCAGAGTGGCCTTGGAGAGTTGGGGCTATAATCTCATGGCGCTaGCAGTCCCACACAAATATG | + |
|
Preference number: 4 (lower is better) Translates to: DAALQISLVSEWPWRVGAIISWR*QSHTNM Trigger: CATATTTGTGTGGGACTGGCAGCGCCATGAGATTAT...AGCCCCAACTCTCCAAGGCCACTCTGAGACCAGCGAGATCTGTAGAGCAGCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS-3UTR TCA 90 bp | CCAGGAGCTCACTTAAGAAAAGCACAAACAACAAGCAACGGTACAGAGATGCTGGCAGGTGTTCCATCCTaGGTGGTGCAGCTCGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGAHLRKAQTTSNGTEMLAGVPS*VVQLVL Trigger: AAGGACGAGCTGCACCACTCAGGATGGAACACCTGC...CAGCATCTCTGTACCGTTGCTTGTTGTTTGTGCTTTTCTTAAGTGAGCTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090839.12 ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| CDS-3UTR GCA 90 bp | TCTGTCATTTGCAGGGTCTGGATAATCTCATGGCGCTGCCAGTCCCACACAAATAATCCGGGGCTTCAGTaGCTGTGTTCCGGTAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: SVICRVWIISWRCQSHTNNPGLQ*LCSGKC Trigger: GCATTTACCGGAACACAGGCACTGAAGCCCCGGATT...ATTTGTGTGGGACTGGCAGCGCCATGAGATTATCCAGACCCTGCAAATGACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCCAGGAGCTCACTTAAGAAAAGCACAAACAACAAGCAACGGTACAGAGATCCACTGGCCAGGCAGTaGCTGGTGTGCAAACTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ASRSSLKKSTNNKQRYRDPLARQ*LVCKLL Trigger: GAGCAGTTTGCACACCAGCCACTGCCTGGCCAGTGG...ATCTCTGTACCGTTGCTTGTTGTTTGTGCTTTTCTTAAGTGAGCTCCTGGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS-3UTR TCA 90 bp | CCAGGAGCTCACTTAAGAAAAGCACAAACAACAAGCAACGGTACAGAGATGCTGAGATGCGGGAGGAGATaGGACCAGGCAGTATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGAHLRKAQTTSNGTEMLRCGRR*DQAVSA Trigger: AGCTGATACTGCCTGGTCTCATCTCCTCCCGCATCT...CAGCATCTCTGTACCGTTGCTTGTTGTTTGTGCTTTTCTTAAGTGAGCTCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090839.12 ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| CDS-3UTR GCA 90 bp | GGAGCTCACTTAAGAAAAGCACAAACAACAAGCAACGGTACAGAGATGCTGCTCTGTCCCCAAAGCAGCTaGTGCAGGTGTTCCATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GAHLRKAQTTSNGTEMLLCPQSS*CRCSIL Trigger: CAGGATGGAACACCTGCAGCAGCTGCTTTGGGGACA...GAGCAGCATCTCTGTACCGTTGCTTGTTGTTTGTGCTTTTCTTAAGTGAGCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090839.12 ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| CDS-3UTR CCA 90 bp | CTTGGATCACCTTCTCCACTGACCAAGTGCCTTCCGCATTCTTGTAGAAGCGCTAGGGGTGGAGTAACCTaGACCACACTTTGTGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LGSPSPLTKCLPHSCRSARGGVT*TTLCAF Trigger: AAATGCACAAAGTGTGGTCCAGGTTACTCCACCCCT...AGCGCTTCTACAAGAATGCGGAAGGCACTTGGTCAGTGGAGAAGGTGATCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCCAGGAGCTCACTTAAGAAAAGCACAAACAACAAGCAACGGTACAGAGATCTGAGCTGGATCATCTaGGGGCCTCCAGGAATTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ASRSSLKKSTNNKQRYRDLSWII*GPPGIR Trigger: ACGAATTCCTGGAGGCCCTCAGATGATCCAGCTCAG...ATCTCTGTACCGTTGCTTGTTGTTTGTGCTTTTCTTAAGTGAGCTCCTGGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS-3UTR TCA 90 bp | TCCAGGAGCTCACTTAAGAAAAGCACAAACAACAAGCAACGGTACAGAGATGCTGCTTGCCATCTAAGCTaGGCTGGATCATCTGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SRSSLKKSTNNKQRYRDAACHLS*AGSSEG Trigger: GCCCTCAGATGATCCAGCTCAGCTTAGATGGCAAGC...AGCATCTCTGTACCGTTGCTTGTTGTTTGTGCTTTTCTTAAGTGAGCTCCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS-3UTR GCA 90 bp | AGCTCACTTAAGAAAAGCACAAACAACAAGCAACGGTACAGAGATGCTGCTCTATGTTGCGTGACTTCGTaGTGTCCCCAAAGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSLKKSTNNKQRYRDAALCCVTS*CPQSSC Trigger: GCAGCTGCTTTGGGGACAGCACGAAGTCACGCAACA...TAGAGCAGCATCTCTGTACCGTTGCTTGTTGTTTGTGCTTTTCTTAAGTGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090839.12 ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGGAGCTCACTTAAGAAAAGCACAAACAACAAGCAACGGTACAGAGATGCTTGGTCCTCCAGCACTTaGACAGAGCCTCCTCTAACA | + |
|
Preference number: 4 (lower is better) Translates to: SRSSLKKSTNNKQRYRDAWSSST*TEPPLT Trigger: TGTTAGAGGAGGCTCTGTGCAAGTGCTGGAGGACCA...AGCATCTCTGTACCGTTGCTTGTTGTTTGTGCTTTTCTTAAGTGAGCTCCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS-3UTR GCA 90 bp | GCTTCCAGGAGCTCACTTAAGAAAAGCACAAACAACAAGCAACGGTACAGAGATTCCAGATGTCAGAACTaGAGTCACCCCCTGGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: ASRSSLKKSTNNKQRYRDSRCQN*SHPLGN Trigger: GTTACCCAGGGGGTGACTGCAGTTCTGACATCTGGA...ATCTCTGTACCGTTGCTTGTTGTTTGTGCTTTTCTTAAGTGAGCTCCTGGAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS-3UTR CCA 90 bp | AGCTCACTTAAGAAAAGCACAAACAACAAGCAACGGTACAGAGATGCTGCTCTACCTTTGCCATTACCCTaGAGATCCCCCAAGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSLKKSTNNKQRYRDAALPLPLP*RSPKVL Trigger: CAGCACCTTGGGGGATCTCCAGGGTAATGGCAAAGG...TAGAGCAGCATCTCTGTACCGTTGCTTGTTGTTTGTGCTTTTCTTAAGTGAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS-3UTR GCA 90 bp | AGCTCACTTAAGAAAAGCACAAACAACAAGCAACGGTACAGAGATGCTGCTCTAAATCCGGGGCTTCAGTaGCTGTGTTCCGGTAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: SSLKKSTNNKQRYRDAALNPGLQ*LCSGKC Trigger: GCATTTACCGGAACACAGGCACTGAAGCCCCGGATT...TAGAGCAGCATCTCTGTACCGTTGCTTGTTGTTTGTGCTTTTCTTAAGTGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090839.12 ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| CDS-3UTR GCA 90 bp | TTAAGAAAAGCACAAACAACAAGCAACGGTACAGAGATGCTGCTCTACAGATCTAATCCGGGGCTTCAGTaGCTGTGTTCCGGTAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: LRKAQTTSNGTEMLLYRSNPGLQ*LCSGKC Trigger: GCATTTACCGGAACACAGGCACTGAAGCCCCGGATT...AGATCTGTAGAGCAGCATCTCTGTACCGTTGCTTGTTGTTTGTGCTTTTCTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090839.12 ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| CDS-3UTR GCA 90 bp | TTAAGAAAAGCACAAACAACAAGCAACGGTACAGAGATGCTGCTCTACAGATCTGGCTGGTGTGCAAACTaGTCACGTTGCACTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRKAQTTSNGTEMLLYRSGWCAN*SRCTWL Trigger: AAGCCAAGTGCAACGTGAGCAGTTTGCACACCAGCC...AGATCTGTAGAGCAGCATCTCTGTACCGTTGCTTGTTGTTTGTGCTTTTCTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| 3UTR CAA 72 bp | CAACTTCAGCCCTCCATTTACTGTGTCTACATCAATTaGAAGCATCATGGAGCCTTCCCTAATGAGGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLQPSIYCVYIN*KHHGAFPNEVR Trigger: CCTGACCTCATTAGGGAAGGCTCCATGATGCTTCAAATTGATGTAGACACAGTAAATGGAGGGCTGAAGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCCAGGAGCTCACTTAAGAAAAGCACAAACAACAAGCAACGGTACAGAGATGTGTCTACATCAATTTaGAGCATCATGGAGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ASRSSLKKSTNNKQRYRDVSTSI*SIMEPS Trigger: GGAAGGCTCCATGATGCTTCAAATTGATGTAGACAC...ATCTCTGTACCGTTGCTTGTTGTTTGTGCTTTTCTTAAGTGAGCTCCTGGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS-3UTR GCA 90 bp | TTAAGAAAAGCACAAACAACAAGCAACGGTACAGAGATGCTGCTCTACAGATCTGAAGACATTGGGAGCTaGCCATTCAGTGCTGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: LRKAQTTSNGTEMLLYRSEDIGS*PFSADH Trigger: ATGGTCAGCACTGAATGGGCAGCTCCCAATGTCTTC...AGATCTGTAGAGCAGCATCTCTGTACCGTTGCTTGTTGTTTGTGCTTTTCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS-3UTR GCA 90 bp | AGCTCACTTAAGAAAAGCACAAACAACAAGCAACGGTACAGAGATGCTGCTCTAAGCCCATCTGTCATTTaGAGGGTCTGGATAATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSLKKSTNNKQRYRDAALSPSVI*RVWIIS Trigger: TGAGATTATCCAGACCCTGCAAATGACAGATGGGCT...TAGAGCAGCATCTCTGTACCGTTGCTTGTTGTTTGTGCTTTTCTTAAGTGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS TCA 90 bp | CACGAGGCTCAGAGCCCACATCCACCACGTAGATGCGGGAGGAGATaGGACCAGGCAGTATCAGCTTGTTGCGTGACTTCGTGCTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: HEAQSPHPPRRCGRR*DQAVSACCVTSCCP Trigger: GGGACAGCACGAAGTCACGCAACAAGCTGATACTGCCTGGTCTCATCTCCTCCCGCATCTACGTGGTGGATGTGGGCTCTGAGCCTCGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090839.12 ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTACAGATCTCGCTGGTCTCAGAGTGGCCTTGGAGAGTTGGGGCTGAGAGCGTGCTGACCATGACATaGTGTCGAGGCTGGTACCAG | + |
|
Preference number: 5 (lower is better) Translates to: ALQISLVSEWPWRVGAESVLTMT*CRGWYQ Trigger: CTGGTACCAGCCTCGACACAATGTCATGGTCAGCAC...GCTCTCAGCCCCAACTCTCCAAGGCCACTCTGAGACCAGCGAGATCTGTAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS GCA 90 bp | GCAGTATCAGCTTGTTGCGTGACTTCGTGCTGTCCCCAAAGCAGCTaGTGCAGGTGTTCCATCCTGAGTGGTGCAGCTCGTCCTTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: AVSACCVTSCCPQSS*CRCSILSGAARPSG Trigger: ACCTGAAGGACGAGCTGCACCACTCAGGATGGAACACCTGCAGCAGCTGCTTTGGGGACAGCACGAAGTCACGCAACAAGCTGATACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090839.12 ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| CDS-3UTR CAA 90 bp | GAGTGGCCTTGGAGAGTTGGGGCTGAGAGCAGAGTGAAGCCAGGCAGGCTCAGACCATCTTTGAAGACATaGGGAGCTGCCCATTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: EWPWRVGAESRVKPGRLRPSLKT*GAAHSV Trigger: CACTGAATGGGCAGCTCCCAATGTCTTCAAAGATGG...TCTGAGCCTGCCTGGCTTCACTCTGCTCTCAGCCCCAACTCTCCAAGGCCACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS CCA 90 bp | GCCAGGCAGTGGCTGGTGTGCAAACTGCTCACGTTGCACTTGGCTTaGATTTCACTGGCTTCAATGACCTTGTGCAACTTCGGGGCACGA | + |
|
Preference number: 5 (lower is better) Translates to: ARQWLVCKLLTLHLA*ISLASMTLCNFGAR Trigger: TCGTGCCCCGAAGTTGCACAAGGTCATTGAAGCCAGTGAAATCCAAGCCAAGTGCAACGTGAGCAGTTTGCACACCAGCCACTGCCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS-3UTR CAA 90 bp | GCTCTACAGATCTCGCTGGTCTCAGAGTGGCCTTGGAGAGTTGGGGCTGAGAGCCAGCCCATCTGTCATTaGCAGGGTCTGGATAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: ALQISLVSEWPWRVGAESQPICH*QGLDNL Trigger: GAGATTATCCAGACCCTGCAAATGACAGATGGGCTG...GCTCTCAGCCCCAACTCTCCAAGGCCACTCTGAGACCAGCGAGATCTGTAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS GCA 90 bp | CAGTGGCCAAATAATCCGGGGCTTCAGTGCCTGTGTTCCGGTAAATaGAGGGCAAGTAGACAATCTCCTCTCGGGGTCCTTTCATGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: QWPNNPGLQCLCSGK*RASRQSPLGVLSWP Trigger: AGGCCATGAAAGGACCCCGAGAGGAGATTGTCTACTTGCCCTGCATTTACCGGAACACAGGCACTGAAGCCCCGGATTATTTGGCCACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090839.12 ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGATGCTGCTCTACAGATCTCGCTGGTCTCAGAGTGGCCTTGGAGAGTTGGTGCAAACTGCTCACGTaGCACTTGGCTTGGATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: QRCCSTDLAGLRVALESWCKLLT*HLAWIS Trigger: TGAAATCCAAGCCAAGTGCAACGTGAGCAGTTTGCA...CCAACTCTCCAAGGCCACTCTGAGACCAGCGAGATCTGTAGAGCAGCATCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS-3UTR CAA 90 bp | GGAGCTCACTTAAGAAAAGCACAAACAACAAGCAACGGTACAGAGATGCTGCTCGGGTTGAAGCCATCTTaGAAGACATTGGGAGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GAHLRKAQTTSNGTEMLLGLKPS*KTLGAA Trigger: GGCAGCTCCCAATGTCTTCAAAGATGGCTTCAACCC...GAGCAGCATCTCTGTACCGTTGCTTGTTGTTTGTGCTTTTCTTAAGTGAGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS-3UTR CAA 90 bp | AGCTCACTTAAGAAAAGCACAAACAACAAGCAACGGTACAGAGATGCTGCTCTACAGCCCTTCACTTTCTaGGAGGGCACTTGGATCACC | + |
|
Preference number: 5 (lower is better) Translates to: SSLKKSTNNKQRYRDAALQPFTF*EGTWIT Trigger: GGTGATCCAAGTGCCCTCCAAGAAAGTGAAGGGCTG...TAGAGCAGCATCTCTGTACCGTTGCTTGTTGTTTGTGCTTTTCTTAAGTGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS-3UTR CAA 90 bp | TCCAGGAGCTCACTTAAGAAAAGCACAAACAACAAGCAACGGTACAGAGATGCTAAGTCCACCAGAAAGTaGGGGTTCAACTTCAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SRSSLKKSTNNKQRYRDAKSTRK*GFNFSP Trigger: AGGGCTGAAGTTGAACCCCAACTTTCTGGTGGACTT...AGCATCTCTGTACCGTTGCTTGTTGTTTGTGCTTTTCTTAAGTGAGCTCCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS-3UTR CAA 90 bp | TTAAGAAAAGCACAAACAACAAGCAACGGTACAGAGATGCTGCTCTACAGATCTAGCACAAAACTCCCTTaGCCATTACCCTGGAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: LRKAQTTSNGTEMLLYRSSTKLP*PLPWRS Trigger: GGATCTCCAGGGTAATGGCAAAGGGAGTTTTGTGCT...AGATCTGTAGAGCAGCATCTCTGTACCGTTGCTTGTTGTTTGTGCTTTTCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS-3UTR CAA 90 bp | CCAGGAGCTCACTTAAGAAAAGCACAAACAACAAGCAACGGTACAGAGATGCTGTGTGTCTACATCAATTaGAAGCATCATGGAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PGAHLRKAQTTSNGTEMLCVYIN*KHHGAF Trigger: GAAGGCTCCATGATGCTTCAAATTGATGTAGACACA...CAGCATCTCTGTACCGTTGCTTGTTGTTTGTGCTTTTCTTAAGTGAGCTCCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS CAA 90 bp | CTGCTCACGTTGCACTTGGCTTGGATTTCACTGGCTTCAATGACCTaGTGCAACTTCGGGGCACGAGGCTCAGAGCCCACATCCACCACG | + |
|
Preference number: 6 (lower is better) Translates to: LLTLHLAWISLASMT*CNFGARGSEPTSTT Trigger: CGTGGTGGATGTGGGCTCTGAGCCTCGTGCCCCGAAGTTGCACAAGGTCATTGAAGCCAGTGAAATCCAAGCCAAGTGCAACGTGAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS CAA 90 bp | GGCCAGGCAGTGGCTGGTGTGCAAACTGCTCACGTTGCACTTGGCTaGGATTTCACTGGCTTCAATGACCTTGTGCAACTTCGGGGCACG | + |
|
Preference number: 6 (lower is better) Translates to: GQAVAGVQTAHVALG*DFTGFNDLVQLRGT Trigger: CGTGCCCCGAAGTTGCACAAGGTCATTGAAGCCAGTGAAATCCAAGCCAAGTGCAACGTGAGCAGTTTGCACACCAGCCACTGCCTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS TCA 72 bp | CAGAGCCCACATCCACCACGTAGATGCGGGAGGAGATaGGACCAGGCAGTATCAGCTTGTTGCGTGACTTCG | + |
|
Preference number: 6 (lower is better) Translates to: QSPHPPRRCGRR*DQAVSACCVTS Trigger: CGAAGTCACGCAACAAGCTGATACTGCCTGGTCTCATCTCCTCCCGCATCTACGTGGTGGATGTGGGCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090839.12 ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| CDS CCA 72 bp | AGGGCAAGTAGACAATCTCCTCTCGGGGTCCTTTCATaGCCTCCAGAGGGGTGGAGTAACCTGGACCACACT | + |
|
Preference number: 6 (lower is better) Translates to: RASRQSPLGVLS*PPEGWSNLDHT Trigger: AGTGTGGTCCAGGTTACTCCACCCCTCTGGAGGCCATGAAAGGACCCCGAGAGGAGATTGTCTACTTGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090839.12 ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| CDS CAA 90 bp | CCACTGGCCAGGCAGTGGCTGGTGTGCAAACTGCTCACGTTGCACTaGGCTTGGATTTCACTGGCTTCAATGACCTTGTGCAACTTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: PLARQWLVCKLLTLH*AWISLASMTLCNFG Trigger: CCCGAAGTTGCACAAGGTCATTGAAGCCAGTGAAATCCAAGCCAAGTGCAACGTGAGCAGTTTGCACACCAGCCACTGCCTGGCCAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS GCA 72 bp | CTTCTCCACTGGCCAGGCAGTGGCTGGTGTGCAAACTaGTCACGTTGCACTTGGCTTGGATTTCACTGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LLHWPGSGWCAN*SRCTWLGFHWL Trigger: AAGCCAGTGAAATCCAAGCCAAGTGCAACGTGAGCAGTTTGCACACCAGCCACTGCCTGGCCAGTGGAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS CAA 72 bp | CTGGCCAGGCAGTGGCTGGTGTGCAAACTGCTCACGTaGCACTTGGCTTGGATTTCACTGGCTTCAATGACC | + |
|
Preference number: 6 (lower is better) Translates to: LARQWLVCKLLT*HLAWISLASMT Trigger: GGTCATTGAAGCCAGTGAAATCCAAGCCAAGTGCAACGTGAGCAGTTTGCACACCAGCCACTGCCTGGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS CAA 72 bp | TTGCACTTGGCTTGGATTTCACTGGCTTCAATGACCTaGTGCAACTTCGGGGCACGAGGCTCAGAGCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: LHLAWISLASMT*CNFGARGSEPT Trigger: TGTGGGCTCTGAGCCTCGTGCCCCGAAGTTGCACAAGGTCATTGAAGCCAGTGAAATCCAAGCCAAGTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS CAA 90 bp | ACTTCTCCACTGGCCAGGCAGTGGCTGGTGTGCAAACTGCTCACGTaGCACTTGGCTTGGATTTCACTGGCTTCAATGACCTTGTGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: TSPLARQWLVCKLLT*HLAWISLASMTLCN Trigger: GTTGCACAAGGTCATTGAAGCCAGTGAAATCCAAGCCAAGTGCAACGTGAGCAGTTTGCACACCAGCCACTGCCTGGCCAGTGGAGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS GCA 72 bp | AATAATCCGGGGCTTCAGTGCCTGTGTTCCGGTAAATaGAGGGCAAGTAGACAATCTCCTCTCGGGGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: NNPGLQCLCSGK*RASRQSPLGVL Trigger: AAGGACCCCGAGAGGAGATTGTCTACTTGCCCTGCATTTACCGGAACACAGGCACTGAAGCCCCGGATTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090839.12 ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| CDS CAA 72 bp | AGGCAGTGGCTGGTGTGCAAACTGCTCACGTTGCACTaGGCTTGGATTTCACTGGCTTCAATGACCTTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: RQWLVCKLLTLH*AWISLASMTLC Trigger: GCACAAGGTCATTGAAGCCAGTGAAATCCAAGCCAAGTGCAACGTGAGCAGTTTGCACACCAGCCACTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||
| CDS GCA 72 bp | CTACATCCACAGTGGCCAAATAATCCGGGGCTTCAGTaGCTGTGTTCCGGTAAATGCAGGGCAAGTAGACAA | + |
|
Preference number: 6 (lower is better) Translates to: LHPQWPNNPGLQ*LCSGKCRASRQ Trigger: TTGTCTACTTGCCCTGCATTTACCGGAACACAGGCACTGAAGCCCCGGATTATTTGGCCACTGTGGATGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090839.12 ENSMUST00000134202.2 ENSMUST00000140757.8 |
||
| CDS CAA 72 bp | GTGGCTGGTGTGCAAACTGCTCACGTTGCACTTGGCTaGGATTTCACTGGCTTCAATGACCTTGTGCAACTT | + |
|
Preference number: 6 (lower is better) Translates to: VAGVQTAHVALG*DFTGFNDLVQL Trigger: AAGTTGCACAAGGTCATTGAAGCCAGTGAAATCCAAGCCAAGTGCAACGTGAGCAGTTTGCACACCAGCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090839.12 |
||