Pregenerated sensors for SELE (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026582Ensembl transcript IDs: ENSMUST00000027874.6
Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | TCTGCTATTCCAGCTCGCGCTCTCCCCCGTCCATTCACTCTCTTTTaGAGAGAGCACCTCCACCTTCTGTGGCAGCATGTTCTTCATACT | + |
Preference number: 1 (lower is better) Translates to: SAIPARALPRPFTLF*REHLHLLWQHVLHT Trigger: AGTATGAAGAACATGCTGCCACAGAAGGTGGAGGTGCTCTCTTCAAAAGAGAGTGAATGGACGGGGGAGAGCGCGAGCTGGAATAGCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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3UTR CAA 90 bp | TTCTGCTATTCCAGCTCGCGCTCTCCCCCGTCCATTCACTCTCTTTaGAAGAGAGCACCTCCACCTTCTGTGGCAGCATGTTCTTCATAC | + |
Preference number: 2 (lower is better) Translates to: FCYSSSRSPPSIHSL*KRAPPPSVAACSSY Trigger: GTATGAAGAACATGCTGCCACAGAAGGTGGAGGTGCTCTCTTCAAAAGAGAGTGAATGGACGGGGGAGAGCGCGAGCTGGAATAGCAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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3UTR-3UTR GCA 90 bp | TGGCCTTGTCACTCAGTTTTGATCCATGGAGTCGGGATCCCAGTTTTTAAGCAGAGACAGTTCATTTCCTaGTGTCTTCAGCTTATCATT | + |
Preference number: 2 (lower is better) Translates to: WPCHSVLIHGVGIPVFKQRQFIS*CLQLII Trigger: AATGATAAGCTGAAGACAGCAGGAAATGAACTGTCT...CTGCTTAAAAACTGGGATCCCGACTCCATGGATCAAAACTGAGTGACAAGGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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3UTR TCA 72 bp | CCAGCTCGCGCTCTCCCCCGTCCATTCACTCTCTTTTaGAGAGAGCACCTCCACCTTCTGTGGCAGCATGTT | + |
Preference number: 3 (lower is better) Translates to: PARALPRPFTLF*REHLHLLWQHV Trigger: AACATGCTGCCACAGAAGGTGGAGGTGCTCTCTTCAAAAGAGAGTGAATGGACGGGGGAGAGCGCGAGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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3UTR TCA 72 bp | GCAATAAAACGCTGTTTCTGTTCCCAAATTCTAGCATaGCTAAGAGTCAGAATGGATTCTGCTATTCCAGCT | + |
Preference number: 3 (lower is better) Translates to: AIKRCFCSQILA*LRVRMDSAIPA Trigger: AGCTGGAATAGCAGAATCCATTCTGACTCTTAGTCATGCTAGAATTTGGGAACAGAAACAGCGTTTTATTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CCA 90 bp | GAGGGCTGGCCTTGTCACTCAGTTTTGATCCATGGAGTCGGGATCCCAGTTTTTACGGGTGGGGCTGACTaGGGCTTCACAGGTAGGCGG | + |
Preference number: 4 (lower is better) Translates to: EGWPCHSVLIHGVGIPVFTGGAD*GFTGRR Trigger: CCGCCTACCTGTGAAGCCCCAGTCAGCCCCACCCGT...AAAAACTGGGATCCCGACTCCATGGATCAAAACTGAGTGACAAGGCCAGCCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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3UTR CAA 72 bp | TCCAGCTCGCGCTCTCCCCCGTCCATTCACTCTCTTTaGAAGAGAGCACCTCCACCTTCTGTGGCAGCATGT | + |
Preference number: 4 (lower is better) Translates to: SSSRSPPSIHSL*KRAPPPSVAAC Trigger: ACATGCTGCCACAGAAGGTGGAGGTGCTCTCTTCAAAAGAGAGTGAATGGACGGGGGAGAGCGCGAGCTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CCA 90 bp | GAGGGCTGGCCTTGTCACTCAGTTTTGATCCATGGAGTCGGGATCCCAGTTTTTAAGGGGCCGAACGGGTaGGAGCAGTTCAGGCTTCCA | + |
Preference number: 4 (lower is better) Translates to: EGWPCHSVLIHGVGIPVFKGPNG*EQFRLP Trigger: TGGAAGCCTGAACTGCTCCCACCCGTTCGGCCCCTT...AAAAACTGGGATCCCGACTCCATGGATCAAAACTGAGTGACAAGGCCAGCCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR TCA 90 bp | TCTCCCCCGTCCATTCACTCTCTTTTGAAGAGAGCACCTCCACCTTCTGTGGCATTGAGGAACATTTCCTaGTACCGTGGGCAGGGTGGG | + |
Preference number: 4 (lower is better) Translates to: SPPSIHSLLKRAPPPSVALRNIS*YRGQGG Trigger: CCCACCCTGCCCACGGTATCAGGAAATGTTCCTCAA...TGCCACAGAAGGTGGAGGTGCTCTCTTCAAAAGAGAGTGAATGGACGGGGGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR TCA 90 bp | TCTCCCCCGTCCATTCACTCTCTTTTGAAGAGAGCACCTCCACCTTCTGTGGCAAGCGCGAGGCATTCATaGCTCCAGCAGTTGCTTTCA | + |
Preference number: 4 (lower is better) Translates to: SPPSIHSLLKRAPPPSVASARHS*LQQLLS Trigger: TGAAAGCAACTGCTGGAGTCATGAATGCCTCGCGCT...TGCCACAGAAGGTGGAGGTGCTCTCTTCAAAAGAGAGTGAATGGACGGGGGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR GCA 90 bp | TCTCCCCCGTCCATTCACTCTCTTTTGAAGAGAGCACCTCCACCTTCTGTGGCATTGCAAGTCACAGCTTaGTCACAGTTGGGTCCCAGG | + |
Preference number: 4 (lower is better) Translates to: SPPSIHSLLKRAPPPSVALQVTA*SQLGPR Trigger: CCTGGGACCCAACTGTGAGCAAGCTGTGACTTGCAA...TGCCACAGAAGGTGGAGGTGCTCTCTTCAAAAGAGAGTGAATGGACGGGGGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR GCA 90 bp | TGGCCTTGTCACTCAGTTTTGATCCATGGAGTCGGGATCCCAGTTTTTAAGCAGCGGTGGTCTCCATGCTaGTGGGCAGGTAGCCCCTTT | + |
Preference number: 4 (lower is better) Translates to: WPCHSVLIHGVGIPVFKQRWSPC*WAGSPF Trigger: AAAGGGGCTACCTGCCCAGCAGCATGGAGACCACCG...CTGCTTAAAAACTGGGATCCCGACTCCATGGATCAAAACTGAGTGACAAGGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR GCA 90 bp | TCTCCCCCGTCCATTCACTCTCTTTTGAAGAGAGCACCTCCACCTTCTGTGGCAGGTGTTCCTGTGGTTTaGAAGTCACAGCTTGCTCAC | + |
Preference number: 4 (lower is better) Translates to: SPPSIHSLLKRAPPPSVAGVPVV*KSQLAH Trigger: GTGAGCAAGCTGTGACTTGCAAACCACAGGAACACC...TGCCACAGAAGGTGGAGGTGCTCTCTTCAAAAGAGAGTGAATGGACGGGGGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR GCA 90 bp | TCCATTCACTCTCTTTTGAAGAGAGCACCTCCACCTTCTGTGGCAGCATGTTCTTGTCCACTGCCCTTGTaGGCTGCATTCAACCTGCGC | + |
Preference number: 4 (lower is better) Translates to: SIHSLLKRAPPPSVAACSCPLPL*AAFNLR Trigger: GCGCAGGTTGAATGCAGCGCACAAGGGCAGTGGACA...AGAACATGCTGCCACAGAAGGTGGAGGTGCTCTCTTCAAAAGAGAGTGAATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CCA 90 bp | TGGCCTTGTCACTCAGTTTTGATCCATGGAGTCGGGATCCCAGTTTTTAAGCAGCAGCTTGCTCACAGTTaGGTCCCAGGAAGCCAGGGT | + |
Preference number: 4 (lower is better) Translates to: WPCHSVLIHGVGIPVFKQQLAHS*VPGSQG Trigger: ACCCTGGCTTCCTGGGACCCAACTGTGAGCAAGCTG...CTGCTTAAAAACTGGGATCCCGACTCCATGGATCAAAACTGAGTGACAAGGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CCA 90 bp | GAGTCGGGATCCCAGTTTTTAAGCAGGCAAGAGGAACCAGGATTCTGTAGACAGGCATTCAACCTGCGCTaGCCCCTGCAACGTGAAACT | + |
Preference number: 4 (lower is better) Translates to: ESGSQFLSRQEEPGFCRQAFNLR*PLQRET Trigger: AGTTTCACGTTGCAGGGGCCAGCGCAGGTTGAATGC...CTGTCTACAGAATCCTGGTTCCTCTTGCCTGCTTAAAAACTGGGATCCCGACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CCA 90 bp | GAGTCGGGATCCCAGTTTTTAAGCAGGCAAGAGGAACCAGGATTCTGTAGACAGGGACATTGTACCACTTaGCAGGAGGGGACTTCCTGG | + |
Preference number: 4 (lower is better) Translates to: ESGSQFLSRQEEPGFCRQGHCTT*QEGTSW Trigger: CCAGGAAGTCCCCTCCTGCCAAGTGGTACAATGTCC...CTGTCTACAGAATCCTGGTTCCTCTTGCCTGCTTAAAAACTGGGATCCCGACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR TCA 90 bp | GAGGGCTGGCCTTGTCACTCAGTTTTGATCCATGGAGTCGGGATCCCAGTTTTTAAGTTCTCCAGCTGTTaGGTGGCTGCAGCTCACAAA | + |
Preference number: 4 (lower is better) Translates to: EGWPCHSVLIHGVGIPVFKFSSC*VAAAHK Trigger: TTTGTGAGCTGCAGCCACTCAACAGCTGGAGAACTT...AAAAACTGGGATCCCGACTCCATGGATCAAAACTGAGTGACAAGGCCAGCCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR GCA 90 bp | AGAGGGCTGGCCTTGTCACTCAGTTTTGATCCATGGAGTCGGGATCCCAGTTTTCCACACAGTCAAACGTaGATGTCGTGTTCCATGGGT | + |
Preference number: 4 (lower is better) Translates to: RGLALSLSFDPWSRDPSFPHSQT*MSCSMG Trigger: ACCCATGGAACACGACATGCACGTTTGACTGTGTGG...AAAACTGGGATCCCGACTCCATGGATCAAAACTGAGTGACAAGGCCAGCCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR GCA 90 bp | CTGAGTCATTCTAGTAGAGGGCTGGCCTTGTCACTCAGTTTTGATCCATGGAGTTCCTGCCGCAGAAAGTaGAACTACCAAGGGACGGGT | + |
Preference number: 4 (lower is better) Translates to: LSHSSRGLALSLSFDPWSSCRRK*NYQGTG Trigger: ACCCGTCCCTTGGTAGTTGCACTTTCTGCGGCAGGA...ACTCCATGGATCAAAACTGAGTGACAAGGCCAGCCCTCTACTAGAATGACTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CCA 90 bp | GAGGGCTGGCCTTGTCACTCAGTTTTGATCCATGGAGTCGGGATCCCAGTTTTTCACTGCAGGATGCATTaGTACACGAAGCTGTGTAGC | + |
Preference number: 4 (lower is better) Translates to: EGWPCHSVLIHGVGIPVFHCRMH*YTKLCS Trigger: GCTACACAGCTTCGTGTACCAATGCATCCTGCAGTG...AAAAACTGGGATCCCGACTCCATGGATCAAAACTGAGTGACAAGGCCAGCCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CCA 90 bp | CTGAGTCATTCTAGTAGAGGGCTGGCCTTGTCACTCAGTTTTGATCCATGGAGTTCACATTCAACCACATaGCAGGCTGGAGCAGGCGCA | + |
Preference number: 4 (lower is better) Translates to: LSHSSRGLALSLSFDPWSSHSTT*QAGAGA Trigger: TGCGCCTGCTCCAGCCTGCCATGTGGTTGAATGTGA...ACTCCATGGATCAAAACTGAGTGACAAGGCCAGCCCTCTACTAGAATGACTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CCA 90 bp | GAGGGCTGGCCTTGTCACTCAGTTTTGATCCATGGAGTCGGGATCCCAGTTTTTGACAGCTTTGCAGACTaGGATTTGTGGTGTCCACTG | + |
Preference number: 4 (lower is better) Translates to: EGWPCHSVLIHGVGIPVFDSFAD*DLWCPL Trigger: CAGTGGACACCACAAATCCCAGTCTGCAAAGCTGTC...AAAAACTGGGATCCCGACTCCATGGATCAAAACTGAGTGACAAGGCCAGCCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR TCA 90 bp | AGAGGGCTGGCCTTGTCACTCAGTTTTGATCCATGGAGTCGGGATCCCAGTTTTAAGCCCTCATTGCATTaGAAGGCACATGAGGACTTG | + |
Preference number: 4 (lower is better) Translates to: RGLALSLSFDPWSRDPSFKPSLH*KAHEDL Trigger: CAAGTCCTCATGTGCCTTTCAATGCAATGAGGGCTT...AAAACTGGGATCCCGACTCCATGGATCAAAACTGAGTGACAAGGCCAGCCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR TCA 90 bp | CTGAGTCATTCTAGTAGAGGGCTGGCCTTGTCACTCAGTTTTGATCCATGGAGTGCACTCAAGTTGAGCTaGGCCATGCAAGCTAAAGCC | + |
Preference number: 4 (lower is better) Translates to: LSHSSRGLALSLSFDPWSALKLS*AMQAKA Trigger: GGCTTTAGCTTGCATGGCTCAGCTCAACTTGAGTGC...ACTCCATGGATCAAAACTGAGTGACAAGGCCAGCCCTCTACTAGAATGACTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR GCA 90 bp | GAGGGCTGGCCTTGTCACTCAGTTTTGATCCATGGAGTCGGGATCCCAGTTTTTATGACCACTGCAGGATaGATTGGTACACGAAGCTGT | + |
Preference number: 4 (lower is better) Translates to: EGWPCHSVLIHGVGIPVFMTTAG*IGTRSC Trigger: ACAGCTTCGTGTACCAATGCATCCTGCAGTGGTCAT...AAAAACTGGGATCCCGACTCCATGGATCAAAACTGAGTGACAAGGCCAGCCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR GCA 90 bp | TCTCCCCCGTCCATTCACTCTCTTTTGAAGAGAGCACCTCCACCTTCTGTGGCATCTCGTTATCCCAGATaGCAGATGAGGTACACTGTA | + |
Preference number: 4 (lower is better) Translates to: SPPSIHSLLKRAPPPSVASRYPR*QMRYTV Trigger: TACAGTGTACCTCATCTGGCATCTGGGATAACGAGA...TGCCACAGAAGGTGGAGGTGCTCTCTTCAAAAGAGAGTGAATGGACGGGGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR GCA 90 bp | GGCTGGCCTTGTCACTCAGTTTTGATCCATGGAGTCGGGATCCCAGTTTTTAAGCACACTGGACAGCTTTaGAGACTGGGATTTGTGGTG | + |
Preference number: 4 (lower is better) Translates to: GWPCHSVLIHGVGIPVFKHTGQL*RLGFVV Trigger: CACCACAAATCCCAGTCTGCAAAGCTGTCCAGTGTG...CTTAAAAACTGGGATCCCGACTCCATGGATCAAAACTGAGTGACAAGGCCAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CCA 90 bp | GGATCTCATGCTGGCTTCAGTGCCAGGACACAGAACACAATGTTCAAGAATACTTGGTCTCCATGCTGCTaGGCAGGTAGCCCCTTTTAC | + |
Preference number: 4 (lower is better) Translates to: GSHAGFSARTQNTMFKNTWSPCC*AGSPFY Trigger: GTAAAAGGGGCTACCTGCCCAGCAGCATGGAGACCA...AGTATTCTTGAACATTGTGTTCTGTGTCCTGGCACTGAAGCCAGCATGAGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CCA 90 bp | GAGTCGGGATCCCAGTTTTTAAGCAGGCAAGAGGAACCAGGATTCTGTAGACAGGATAAGGCTTCACACTaGACAGCTTTGCAGACTGGG | + |
Preference number: 4 (lower is better) Translates to: ESGSQFLSRQEEPGFCRQDKASH*TALQTG Trigger: CCCAGTCTGCAAAGCTGTCCAGTGTGAAGCCTTATC...CTGTCTACAGAATCCTGGTTCCTCTTGCCTGCTTAAAAACTGGGATCCCGACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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3UTR CAA 72 bp | AAGAGGAAACTGAGTCATTCTAGTAGAGGGCTGGCCTaGTCACTCAGTTTTGATCCATGGAGTCGGGATCCC | + |
Preference number: 4 (lower is better) Translates to: KRKLSHSSRGLA*SLSFDPWSRDP Trigger: GGGATCCCGACTCCATGGATCAAAACTGAGTGACAAGGCCAGCCCTCTACTAGAATGACTCAGTTTCCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR TCA 90 bp | GGCTGGCCTTGTCACTCAGTTTTGATCCATGGAGTCGGGATCCCAGTTTTTAAGGTAGCTCCCAGGATTTaGGGAACATTTCCTGATACC | + |
Preference number: 4 (lower is better) Translates to: GWPCHSVLIHGVGIPVFKVAPRI*GTFPDT Trigger: GGTATCAGGAAATGTTCCTCAAATCCTGGGAGCTAC...CTTAAAAACTGGGATCCCGACTCCATGGATCAAAACTGAGTGACAAGGCCAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR TCA 90 bp | AGAGGGCTGGCCTTGTCACTCAGTTTTGATCCATGGAGTCGGGATCCCAGTTTTGCATTGAAAGGCACATaGGGACTTGTAGGTGAATTC | + |
Preference number: 4 (lower is better) Translates to: RGLALSLSFDPWSRDPSFALKGT*GLVGEF Trigger: GAATTCACCTACAAGTCCTCATGTGCCTTTCAATGC...AAAACTGGGATCCCGACTCCATGGATCAAAACTGAGTGACAAGGCCAGCCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR GCA 90 bp | AGAGGGCTGGCCTTGTCACTCAGTTTTGATCCATGGAGTCGGGATCCCAGTTTTTGCAACGTGAAACTCTaGTCACAGGTGAAGTTACAG | + |
Preference number: 4 (lower is better) Translates to: RGLALSLSFDPWSRDPSFCNVKL*SQVKLQ Trigger: CTGTAACTTCACCTGTGAGCAGAGTTTCACGTTGCA...AAAACTGGGATCCCGACTCCATGGATCAAAACTGAGTGACAAGGCCAGCCCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR GCA 90 bp | TGGCCTTGTCACTCAGTTTTGATCCATGGAGTCGGGATCCCAGTTTTTAAGCAGCATTTCATGTTGCCCTaGTGTGGCGCAGATAAGGCT | + |
Preference number: 4 (lower is better) Translates to: WPCHSVLIHGVGIPVFKQHFMLP*CGADKA Trigger: AGCCTTATCTGCGCCACAGCAGGGCAACATGAAATG...CTGCTTAAAAACTGGGATCCCGACTCCATGGATCAAAACTGAGTGACAAGGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR GCA 90 bp | GAGTCGGGATCCCAGTTTTTAAGCAGGCAAGAGGAACCAGGATTCTGTAGACAGACTTTCCCTGAGATGTaGACTCAAGTTGAGCTGAGC | + |
Preference number: 4 (lower is better) Translates to: ESGSQFLSRQEEPGFCRQTFPEM*TQVELS Trigger: GCTCAGCTCAACTTGAGTGCACATCTCAGGGAAAGT...CTGTCTACAGAATCCTGGTTCCTCTTGCCTGCTTAAAAACTGGGATCCCGACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CCA 90 bp | GGCTGGCCTTGTCACTCAGTTTTGATCCATGGAGTCGGGATCCCAGTTTTTAAGCAACTGGACCCATTTTaGAAAGGTCCAGAAGCACTG | + |
Preference number: 4 (lower is better) Translates to: GWPCHSVLIHGVGIPVFKQLDPF*KGPEAL Trigger: CAGTGCTTCTGGACCTTTCCAAAATGGGTCCAGTTG...CTTAAAAACTGGGATCCCGACTCCATGGATCAAAACTGAGTGACAAGGCCAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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3UTR CAA 72 bp | GTCATTCTAGTAGAGGGCTGGCCTTGTCACTCAGTTTaGATCCATGGAGTCGGGATCCCAGTTTTTAAGCAG | + |
Preference number: 4 (lower is better) Translates to: VILVEGWPCHSV*IHGVGIPVFKQ Trigger: CTGCTTAAAAACTGGGATCCCGACTCCATGGATCAAAACTGAGTGACAAGGCCAGCCCTCTACTAGAATGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR TCA 90 bp | TTTGAAGAGAGCACCTCCACCTTCTGTGGCAGCATGTTCTTCATACTGTCACTACCTCTTGGACCACACTaGAGTCTTCTTGATCCCTTC | + |
Preference number: 4 (lower is better) Translates to: FEESTSTFCGSMFFILSLPLGPH*SLLDPF Trigger: GAAGGGATCAAGAAGACTTCAGTGTGGTCCAAGAGG...TAGTGACAGTATGAAGAACATGCTGCCACAGAAGGTGGAGGTGCTCTCTTCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR TCA 90 bp | TTTGAAGAGAGCACCTCCACCTTCTGTGGCAGCATGTTCTTCATACTGTCACTAGATGTGCACTCAAGTTaGGCTGAGCCATGCAAGCTA | + |
Preference number: 4 (lower is better) Translates to: FEESTSTFCGSMFFILSLDVHSS*AEPCKL Trigger: TAGCTTGCATGGCTCAGCTCAACTTGAGTGCACATC...TAGTGACAGTATGAAGAACATGCTGCCACAGAAGGTGGAGGTGCTCTCTTCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR GCA 90 bp | TTCAGCTTATCATTCTATTTCCCACGATGCATTTGTGTTCCTGATTGTTTTGAAGCACGGTGGTCTCCATaGTGCTGGGCAGGTAGCCCC | + |
Preference number: 4 (lower is better) Translates to: FSLSFYFPRCICVPDCFEARWSP*CWAGSP Trigger: GGGGCTACCTGCCCAGCAGCATGGAGACCACCGTGC...TTCAAAACAATCAGGAACACAAATGCATCGTGGGAAATAGAATGATAAGCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR GCA 90 bp | TCCATTCACTCTCTTTTGAAGAGAGCACCTCCACCTTCTGTGGCAGCATGTTCTCACAGGTCACAGCTTTaGATGATGGCGTCTCGTTAT | + |
Preference number: 4 (lower is better) Translates to: SIHSLLKRAPPPSVAACSHRSQL*MMASRY Trigger: ATAACGAGACGCCATCATGCAAAGCTGTGACCTGTG...AGAACATGCTGCCACAGAAGGTGGAGGTGCTCTCTTCAAAAGAGAGTGAATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR TCA 90 bp | TCCATTCACTCTCTTTTGAAGAGAGCACCTCCACCTTCTGTGGCAGCATGTTCTATCTCTTCCTTGTTCTaGATTGCCACCAGATGTGTG | + |
Preference number: 4 (lower is better) Translates to: SIHSLLKRAPPPSVAACSISSLF*IATRCV Trigger: CACACATCTGGTGGCAATTCAGAACAAGGAAGAGAT...AGAACATGCTGCCACAGAAGGTGGAGGTGCTCTCTTCAAAAGAGAGTGAATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CCA 90 bp | GAGTCGGGATCCCAGTTTTTAAGCAGGCAAGAGGAACCAGGATTCTGTAGACAGTCTTTGTTTGTTGTTTaGTTCACCTGGAGCCCAGTT | + |
Preference number: 4 (lower is better) Translates to: ESGSQFLSRQEEPGFCRQSLFVV*FTWSPV Trigger: AACTGGGCTCCAGGTGAACCAAACAACAAACAAAGA...CTGTCTACAGAATCCTGGTTCCTCTTGCCTGCTTAAAAACTGGGATCCCGACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CCA 90 bp | CTGAGTCATTCTAGTAGAGGGCTGGCCTTGTCACTCAGTTTTGATCCATGGAGTAAGGTCCAGAAGCACTaGGAAGACATTTCATGTTGC | + |
Preference number: 4 (lower is better) Translates to: LSHSSRGLALSLSFDPWSKVQKH*EDISCC Trigger: GCAACATGAAATGTCTTCCCAGTGCTTCTGGACCTT...ACTCCATGGATCAAAACTGAGTGACAAGGCCAGCCCTCTACTAGAATGACTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CCA 90 bp | TTTGAAGAGAGCACCTCCACCTTCTGTGGCAGCATGTTCTTCATACTGTCACTAATCCCATTCCCCTCTTaGACCACACTGAAGTCTTCT | + |
Preference number: 4 (lower is better) Translates to: FEESTSTFCGSMFFILSLIPFPS*TTLKSS Trigger: AGAAGACTTCAGTGTGGTCCAAGAGGGGAATGGGAT...TAGTGACAGTATGAAGAACATGCTGCCACAGAAGGTGGAGGTGCTCTCTTCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR TCA 90 bp | GGATCTCATGCTGGCTTCAGTGCCAGGACACAGAACACAATGTTCAAGAATACTGGTGAAGTTACAGGATaGCTTAAACGCAAGTTCTCC | + |
Preference number: 4 (lower is better) Translates to: GSHAGFSARTQNTMFKNTGEVTG*LKRKFS Trigger: GGAGAACTTGCGTTTAAGTCATCCTGTAACTTCACC...AGTATTCTTGAACATTGTGTTCTGTGTCCTGGCACTGAAGCCAGCATGAGATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CCA 90 bp | GGATCTCATGCTGGCTTCAGTGCCAGGACACAGAACACAATGTTCAAGAATACTAGGAGAACTCACAACTaGACCCATTTTGGAAAGGTC | + |
Preference number: 4 (lower is better) Translates to: GSHAGFSARTQNTMFKNTRRTHN*THFGKV Trigger: GACCTTTCCAAAATGGGTCCAGTTGTGAGTTCTCCT...AGTATTCTTGAACATTGTGTTCTGTGTCCTGGCACTGAAGCCAGCATGAGATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR TCA 90 bp | GGATCTCATGCTGGCTTCAGTGCCAGGACACAGAACACAATGTTCAAGAATACTTGCAGGTGTAACTATTaGTGGTCTCTATGCATTCAC | + |
Preference number: 4 (lower is better) Translates to: GSHAGFSARTQNTMFKNTCRCNY*WSLCIH Trigger: GTGAATGCATAGAGACCATCAATAGTTACACCTGCA...AGTATTCTTGAACATTGTGTTCTGTGTCCTGGCACTGAAGCCAGCATGAGATCC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR TCA 90 bp | TTCAGCTTATCATTCTATTTCCCACGATGCATTTGTGTTCCTGATTGTTTTGAAGGTCACAGCTTTGCATaGTGGCGTCTCGTTATCCCA | + |
Preference number: 4 (lower is better) Translates to: FSLSFYFPRCICVPDCFEGHSFA*WRLVIP Trigger: TGGGATAACGAGACGCCATCATGCAAAGCTGTGACC...TTCAAAACAATCAGGAACACAAATGCATCGTGGGAAATAGAATGATAAGCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR GCA 90 bp | TTCAGCTTATCATTCTATTTCCCACGATGCATTTGTGTTCCTGATTGTTTTGAAAACACGTGGGCTTCTTaGTATCCCATTCCCCTCTTG | + |
Preference number: 4 (lower is better) Translates to: FSLSFYFPRCICVPDCFENTWAS*YPIPLL Trigger: CAAGAGGGGAATGGGATAGCAAGAAGCCCACGTGTT...TTCAAAACAATCAGGAACACAAATGCATCGTGGGAAATAGAATGATAAGCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR TCA 90 bp | TTCAGCTTATCATTCTATTTCCCACGATGCATTTGTGTTCCTGATTGTTTTGAATCTATGCATTCACCATaGCCACTGCAGGATGCATTG | + |
Preference number: 4 (lower is better) Translates to: FSLSFYFPRCICVPDCFESMHSP*PLQDAL Trigger: CAATGCATCCTGCAGTGGTCATGGTGAATGCATAGA...TTCAAAACAATCAGGAACACAAATGCATCGTGGGAAATAGAATGATAAGCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CCA 90 bp | TTCAGCTTATCATTCTATTTCCCACGATGCATTTGTGTTCCTGATTGTTTTGAATCACAGCTGAACACGTaGGCTTCTTGCTATCCCATT | + |
Preference number: 4 (lower is better) Translates to: FSLSFYFPRCICVPDCFESQLNT*ASCYPI Trigger: AATGGGATAGCAAGAAGCCCACGTGTTCAGCTGTGA...TTCAAAACAATCAGGAACACAAATGCATCGTGGGAAATAGAATGATAAGCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR TCA 90 bp | TTCAGCTTATCATTCTATTTCCCACGATGCATTTGTGTTCCTGATTGTTTTGAAACACTGAAGTCTTCTTaGTCCCTTCAGTTCAAATCC | + |
Preference number: 4 (lower is better) Translates to: FSLSFYFPRCICVPDCFETLKSS*SLQFKS Trigger: GGATTTGAACTGAAGGGATCAAGAAGACTTCAGTGT...TTCAAAACAATCAGGAACACAAATGCATCGTGGGAAATAGAATGATAAGCTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR GCA 90 bp | TTCAGCTTATCATTCTATTTCCCACGATGCATTTGTGTTCCTGATTGTTTTGAATTCCTTGTTCTGAATTaGCACCAGATGTGTGTAGTC | + |
Preference number: 4 (lower is better) Translates to: FSLSFYFPRCICVPDCFEFLVLN*HQMCVV Trigger: GACTACACACATCTGGTGGCAATTCAGAACAAGGAA...TTCAAAACAATCAGGAACACAAATGCATCGTGGGAAATAGAATGATAAGCTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS GCA 90 bp | GCGCACTCCACTCTCCAGAGGACGTACACCGCACGGTGGTCTCCATaGTGCTGGGCAGGTAGCCCCTTTTACAGCCAAAGGAGCAGGAGG | + |
Preference number: 5 (lower is better) Translates to: AHSTLQRTYTARWSP*CWAGSPFYSQRSRR Trigger: CCTCCTGCTCCTTTGGCTGTAAAAGGGGCTACCTGCCCAGCAGCATGGAGACCACCGTGCGGTGTACGTCCTCTGGAGAGTGGAGTGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CCA 90 bp | CTGGAGCAGGCGCACTCCACTCTCCAGAGGACGTACACCGCACGGTaGTCTCCATGCTGCTGGGCAGGTAGCCCCTTTTACAGCCAAAGG | + |
Preference number: 5 (lower is better) Translates to: LEQAHSTLQRTYTAR*SPCCWAGSPFYSQR Trigger: CCTTTGGCTGTAAAAGGGGCTACCTGCCCAGCAGCATGGAGACCACCGTGCGGTGTACGTCCTCTGGAGAGTGGAGTGCGCCTGCTCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CCA 90 bp | GTGGGCAGGGTGGGTCAAAGCTTCACATTCAACCACATGGCAGGCTaGAGCAGGCGCACTCCACTCTCCAGAGGACGTACACCGCACGGT | + |
Preference number: 5 (lower is better) Translates to: VGRVGQSFTFNHMAG*SRRTPLSRGRTPHG Trigger: ACCGTGCGGTGTACGTCCTCTGGAGAGTGGAGTGCGCCTGCTCCAGCCTGCCATGTGGTTGAATGTGAAGCTTTGACCCACCCTGCCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS GCA 90 bp | CACTCCACTCTCCAGAGGACGTACACCGCACGGTGGTCTCCATGCTaGTGGGCAGGTAGCCCCTTTTACAGCCAAAGGAGCAGGAGGAAT | + |
Preference number: 5 (lower is better) Translates to: HSTLQRTYTARWSPC*WAGSPFYSQRSRRN Trigger: ATTCCTCCTGCTCCTTTGGCTGTAAAAGGGGCTACCTGCCCAGCAGCATGGAGACCACCGTGCGGTGTACGTCCTCTGGAGAGTGGAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS GCA 90 bp | GCTTCACACTGGACAGCTTTGCAGACTGGGATTTGTGGTGTCCACTaGCCTTGTGCGCTGCATTCAACCTGCGCTGGCCCCTGCAACGTG | + |
Preference number: 5 (lower is better) Translates to: ASHWTALQTGICGVH*PCALHSTCAGPCNV Trigger: CACGTTGCAGGGGCCAGCGCAGGTTGAATGCAGCGCACAAGGGCAGTGGACACCACAAATCCCAGTCTGCAAAGCTGTCCAGTGTGAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CCA 90 bp | CTGATACCGTGGGCAGGGTGGGTCAAAGCTTCACATTCAACCACATaGCAGGCTGGAGCAGGCGCACTCCACTCTCCAGAGGACGTACAC | + |
Preference number: 5 (lower is better) Translates to: LIPWAGWVKASHSTT*QAGAGALHSPEDVH Trigger: GTGTACGTCCTCTGGAGAGTGGAGTGCGCCTGCTCCAGCCTGCCATGTGGTTGAATGTGAAGCTTTGACCCACCCTGCCCACGGTATCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS GCA 90 bp | CTGGACAGCTTTGCAGACTGGGATTTGTGGTGTCCACTGCCCTTGTaGGCTGCATTCAACCTGCGCTGGCCCCTGCAACGTGAAACTCTG | + |
Preference number: 5 (lower is better) Translates to: LDSFADWDLWCPLPL*AAFNLRWPLQRETL Trigger: CAGAGTTTCACGTTGCAGGGGCCAGCGCAGGTTGAATGCAGCGCACAAGGGCAGTGGACACCACAAATCCCAGTCTGCAAAGCTGTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS GCA 90 bp | GGTGGGAGCAGTTCAGGCTTCCATAGTCAGGGTGTTCCTGTGGTTTaGAAGTCACAGCTTGCTCACAGTTGGGTCCCAGGAAGCCAGGGT | + |
Preference number: 5 (lower is better) Translates to: GGSSSGFHSQGVPVV*KSQLAHSWVPGSQG Trigger: ACCCTGGCTTCCTGGGACCCAACTGTGAGCAAGCTGTGACTTGCAAACCACAGGAACACCCTGACTATGGAAGCCTGAACTGCTCCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CCA 90 bp | TCCACTCTCCAGAGGACGTACACCGCACGGTGGTCTCCATGCTGCTaGGCAGGTAGCCCCTTTTACAGCCAAAGGAGCAGGAGGAATTAT | + |
Preference number: 5 (lower is better) Translates to: STLQRTYTARWSPCC*AGSPFYSQRSRRNY Trigger: ATAATTCCTCCTGCTCCTTTGGCTGTAAAAGGGGCTACCTGCCCAGCAGCATGGAGACCACCGTGCGGTGTACGTCCTCTGGAGAGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CAA 90 bp | TCTCCCCCGTCCATTCACTCTCTTTTGAAGAGAGCACCTCCACCTTCTGTGGCAACAGCTTGCTCACAGTaGGGTCCCAGGAAGCCAGGG | + |
Preference number: 5 (lower is better) Translates to: SPPSIHSLLKRAPPPSVATACSQ*GPRKPG Trigger: CCCTGGCTTCCTGGGACCCAACTGTGAGCAAGCTGT...TGCCACAGAAGGTGGAGGTGCTCTCTTCAAAAGAGAGTGAATGGACGGGGGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS GCA 90 bp | GGTGTCCACTGCCCTTGTGCGCTGCATTCAACCTGCGCTGGCCCCTaGAACGTGAAACTCTGCTCACAGGTGAAGTTACAGGATGACTTA | + |
Preference number: 5 (lower is better) Translates to: GVHCPCALHSTCAGP*NVKLCSQVKLQDDL Trigger: TAAGTCATCCTGTAACTTCACCTGTGAGCAGAGTTTCACGTTGCAGGGGCCAGCGCAGGTTGAATGCAGCGCACAAGGGCAGTGGACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS GCA 90 bp | ACTGGGATTTGTGGTGTCCACTGCCCTTGTGCGCTGCATTCAACCTaGGCTGGCCCCTGCAACGTGAAACTCTGCTCACAGGTGAAGTTA | + |
Preference number: 5 (lower is better) Translates to: TGICGVHCPCALHST*AGPCNVKLCSQVKL Trigger: TAACTTCACCTGTGAGCAGAGTTTCACGTTGCAGGGGCCAGCGCAGGTTGAATGCAGCGCACAAGGGCAGTGGACACCACAAATCCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CCA 90 bp | GATTTGTGGTGTCCACTGCCCTTGTGCGCTGCATTCAACCTGCGCTaGCCCCTGCAACGTGAAACTCTGCTCACAGGTGAAGTTACAGGA | + |
Preference number: 5 (lower is better) Translates to: DLWCPLPLCAAFNLR*PLQRETLLTGEVTG Trigger: TCCTGTAACTTCACCTGTGAGCAGAGTTTCACGTTGCAGGGGCCAGCGCAGGTTGAATGCAGCGCACAAGGGCAGTGGACACCACAAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CCA 90 bp | TGTTCCGCTGCAGCTCATGTTCATCTTTCCCGGGACGTCAAGGCTTaGACATTGTACCACTTGGCAGGAGGGGACTTCCTGGGTCCACTT | + |
Preference number: 5 (lower is better) Translates to: CSAAAHVHLSRDVKA*TLYHLAGGDFLGPL Trigger: AAGTGGACCCAGGAAGTCCCCTCCTGCCAAGTGGTACAATGTCCAAGCCTTGACGTCCCGGGAAAGATGAACATGAGCTGCAGCGGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CCA 90 bp | CATTCTGGGGCCGAGGGACATCATCACATTTCACAGCTGAACACGTaGGCTTCTTGCTATCCCATTCCCCTCTTGGACCACACTGAAGTC | + |
Preference number: 5 (lower is better) Translates to: HSGAEGHHHISQLNT*ASCYPIPLLDHTEV Trigger: GACTTCAGTGTGGTCCAAGAGGGGAATGGGATAGCAAGAAGCCCACGTGTTCAGCTGTGAAATGTGATGATGTCCCTCGGCCCCAGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CAA 90 bp | TCTCCCCCGTCCATTCACTCTCTTTTGAAGAGAGCACCTCCACCTTCTGTGGCACAAGTTCTCCAGCTGTaGAGTGGCTGCAGCTCACAA | + |
Preference number: 5 (lower is better) Translates to: SPPSIHSLLKRAPPPSVAQVLQL*SGCSSQ Trigger: TTGTGAGCTGCAGCCACTCAACAGCTGGAGAACTTG...TGCCACAGAAGGTGGAGGTGCTCTCTTCAAAAGAGAGTGAATGGACGGGGGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS TCA 90 bp | ACAGTCAAACGTGCATGTCGTGTTCCATGGGTAGCTCCCAGGATTTaGGGAACATTTCCTGATACCGTGGGCAGGGTGGGTCAAAGCTTC | + |
Preference number: 5 (lower is better) Translates to: TVKRACRVPWVAPRI*GTFPDTVGRVGQSF Trigger: GAAGCTTTGACCCACCCTGCCCACGGTATCAGGAAATGTTCCTCAAATCCTGGGAGCTACCCATGGAACACGACATGCACGTTTGACTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS TCA 90 bp | GGCGTCTCGTTATCCCAGATGCCAGATGAGGTACACTGTAGATTCTaGGCTCCAACTCGCCTGTACCCTTCCACACAGTCAAACGTGCAT | + |
Preference number: 5 (lower is better) Translates to: GVSLSQMPDEVHCRF*APTRLYPSTQSNVH Trigger: ATGCACGTTTGACTGTGTGGAAGGGTACAGGCGAGTTGGAGCTCAGAATCTACAGTGTACCTCATCTGGCATCTGGGATAACGAGACGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS GCA 90 bp | CGTCACAGGTCACAGCTTTGCATGATGGCGTCTCGTTATCCCAGATaGCAGATGAGGTACACTGTAGATTCTGAGCTCCAACTCGCCTGT | + |
Preference number: 5 (lower is better) Translates to: RHRSQLCMMASRYPR*QMRYTVDSELQLAC Trigger: ACAGGCGAGTTGGAGCTCAGAATCTACAGTGTACCTCATCTGGCATCTGGGATAACGAGACGCCATCATGCAAAGCTGTGACCTGTGACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS GCA 90 bp | TGTGCGCTGCATTCAACCTGCGCTGGCCCCTGCAACGTGAAACTCTaGTCACAGGTGAAGTTACAGGATGACTTAAACGCAAGTTCTCCA | + |
Preference number: 5 (lower is better) Translates to: CALHSTCAGPCNVKL*SQVKLQDDLNASSP Trigger: TGGAGAACTTGCGTTTAAGTCATCCTGTAACTTCACCTGTGAGCAGAGTTTCACGTTGCAGGGGCCAGCGCAGGTTGAATGCAGCGCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CCA 90 bp | AGACATTTCATGTTGCCCTGCTGTGGCGCAGATAAGGCTTCACACTaGACAGCTTTGCAGACTGGGATTTGTGGTGTCCACTGCCCTTGT | + |
Preference number: 5 (lower is better) Translates to: RHFMLPCCGADKASH*TALQTGICGVHCPC Trigger: ACAAGGGCAGTGGACACCACAAATCCCAGTCTGCAAAGCTGTCCAGTGTGAAGCCTTATCTGCGCCACAGCAGGGCAACATGAAATGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CAA 90 bp | TGGCCTTGTCACTCAGTTTTGATCCATGGAGTCGGGATCCCAGTTTTTAAGCAGTGGTGTCCACTGCCCTaGTGCGCTGCATTCAACCTG | + |
Preference number: 5 (lower is better) Translates to: WPCHSVLIHGVGIPVFKQWCPLP*CAAFNL Trigger: CAGGTTGAATGCAGCGCACAAGGGCAGTGGACACCA...CTGCTTAAAAACTGGGATCCCGACTCCATGGATCAAAACTGAGTGACAAGGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CAA 90 bp | TCTCCCCCGTCCATTCACTCTCTTTTGAAGAGAGCACCTCCACCTTCTGTGGCATCACACTGGACAGCTTaGCAGACTGGGATTTGTGGT | + |
Preference number: 5 (lower is better) Translates to: SPPSIHSLLKRAPPPSVASHWTA*QTGICG Trigger: ACCACAAATCCCAGTCTGCAAAGCTGTCCAGTGTGA...TGCCACAGAAGGTGGAGGTGCTCTCTTCAAAAGAGAGTGAATGGACGGGGGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS GCA 90 bp | GATTCTGAGCTCCAACTCGCCTGTACCCTTCCACACAGTCAAACGTaGATGTCGTGTTCCATGGGTAGCTCCCAGGATTTGAGGAACATT | + |
Preference number: 5 (lower is better) Translates to: DSELQLACTLPHSQT*MSCSMGSSQDLRNI Trigger: AATGTTCCTCAAATCCTGGGAGCTACCCATGGAACACGACATGCACGTTTGACTGTGTGGAAGGGTACAGGCGAGTTGGAGCTCAGAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CAA 90 bp | CTGAGTCATTCTAGTAGAGGGCTGGCCTTGTCACTCAGTTTTGATCCATGGAGTTGGACATTGTACCACTaGGCAGGAGGGGACTTCCTG | + |
Preference number: 5 (lower is better) Translates to: LSHSSRGLALSLSFDPWSWTLYH*AGGDFL Trigger: CAGGAAGTCCCCTCCTGCCAAGTGGTACAATGTCCA...ACTCCATGGATCAAAACTGAGTGACAAGGCCAGCCCTCTACTAGAATGACTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS TCA 90 bp | ATGTCGTGTTCCATGGGTAGCTCCCAGGATTTGAGGAACATTTCCTaGTACCGTGGGCAGGGTGGGTCAAAGCTTCACATTCAACCACAT | + |
Preference number: 5 (lower is better) Translates to: MSCSMGSSQDLRNIS*YRGQGGSKLHIQPH Trigger: ATGTGGTTGAATGTGAAGCTTTGACCCACCCTGCCCACGGTATCAGGAAATGTTCCTCAAATCCTGGGAGCTACCCATGGAACACGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS GCA 90 bp | TTTTGGAAAGGTCCAGAAGCACTGGGAAGACATTTCATGTTGCCCTaGTGTGGCGCAGATAAGGCTTCACACTGGACAGCTTTGCAGACT | + |
Preference number: 5 (lower is better) Translates to: FWKGPEALGRHFMLP*CGADKASHWTALQT Trigger: AGTCTGCAAAGCTGTCCAGTGTGAAGCCTTATCTGCGCCACAGCAGGGCAACATGAAATGTCTTCCCAGTGCTTCTGGACCTTTCCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS GCA 90 bp | TGTCCAATCATCAGGACATGTAAACTCACACACTGTGCCGAAAACTaGTGTTCCGCTGCAGCTCATGTTCATCTTTCCCGGGACGTCAAG | + |
Preference number: 5 (lower is better) Translates to: CPIIRTCKLTHCAEN*CSAAAHVHLSRDVK Trigger: CTTGACGTCCCGGGAAAGATGAACATGAGCTGCAGCGGAACAGCAGTTTTCGGCACAGTGTGTGAGTTTACATGTCCTGATGATTGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CAA 90 bp | TCCATTCACTCTCTTTTGAAGAGAGCACCTCCACCTTCTGTGGCAGCATGTTCTGGAAGACATTTCATGTaGCCCTGCTGTGGCGCAGAT | + |
Preference number: 5 (lower is better) Translates to: SIHSLLKRAPPPSVAACSGRHFM*PCCGAD Trigger: ATCTGCGCCACAGCAGGGCAACATGAAATGTCTTCC...AGAACATGCTGCCACAGAAGGTGGAGGTGCTCTCTTCAAAAGAGAGTGAATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CAA 90 bp | GAGTCGGGATCCCAGTTTTTAAGCAGGCAAGAGGAACCAGGATTCTGTAGACAGTATCCCATTCCCCTCTaGGACCACACTGAAGTCTTC | + |
Preference number: 5 (lower is better) Translates to: ESGSQFLSRQEEPGFCRQYPIPL*DHTEVF Trigger: GAAGACTTCAGTGTGGTCCAAGAGGGGAATGGGATA...CTGTCTACAGAATCCTGGTTCCTCTTGCCTGCTTAAAAACTGGGATCCCGACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CAA 90 bp | GAGGGCTGGCCTTGTCACTCAGTTTTGATCCATGGAGTCGGGATCCCAGTTTTTTTCTTTGTTTGTTGTTaGGTTCACCTGGAGCCCAGT | + |
Preference number: 5 (lower is better) Translates to: EGWPCHSVLIHGVGIPVFFFVCC*VHLEPS Trigger: ACTGGGCTCCAGGTGAACCAAACAACAAACAAAGAA...AAAAACTGGGATCCCGACTCCATGGATCAAAACTGAGTGACAAGGCCAGCCCTC 49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CCA 90 bp | AGTTCAAATCCTTCTTCGCAGGAGAACTCACAACTGGACCCATTTTaGAAAGGTCCAGAAGCACTGGGAAGACATTTCATGTTGCCCTGC | + |
Preference number: 5 (lower is better) Translates to: SSNPSSQENSQLDPF*KGPEALGRHFMLPC Trigger: GCAGGGCAACATGAAATGTCTTCCCAGTGCTTCTGGACCTTTCCAAAATGGGTCCAGTTGTGAGTTCTCCTGCGAAGAAGGATTTGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CAA 90 bp | TCTCCCCCGTCCATTCACTCTCTTTTGAAGAGAGCACCTCCACCTTCTGTGGCACAGATCCATACGTTATaGACTTTTCTGATTCCAATC | + |
Preference number: 5 (lower is better) Translates to: SPPSIHSLLKRAPPPSVAQIHTL*TFLIPI Trigger: GATTGGAATCAGAAAAGTCAATAACGTATGGATCTG...TGCCACAGAAGGTGGAGGTGCTCTCTTCAAAAGAGAGTGAATGGACGGGGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CAA 90 bp | GAGTCGGGATCCCAGTTTTTAAGCAGGCAAGAGGAACCAGGATTCTGTAGACAGTCATTTCTTTGTTTGTaGTTTGGTTCACCTGGAGCC | + |
Preference number: 5 (lower is better) Translates to: ESGSQFLSRQEEPGFCRQSFLCL*FGSPGA Trigger: GGCTCCAGGTGAACCAAACAACAAACAAAGAAATGA...CTGTCTACAGAATCCTGGTTCCTCTTGCCTGCTTAAAAACTGGGATCCCGACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CAA 90 bp | TGGCCTTGTCACTCAGTTTTGATCCATGGAGTCGGGATCCCAGTTTTTAAGCAGAGAACTGCAGATCCATaGAGTGTCCAATCATCAGGA | + |
Preference number: 5 (lower is better) Translates to: WPCHSVLIHGVGIPVFKQRTADP*SVQSSG Trigger: TCCTGATGATTGGACACTCAATGGATCTGCAGTTCT...CTGCTTAAAAACTGGGATCCCGACTCCATGGATCAAAACTGAGTGACAAGGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS GCA 90 bp | AGCACAGAGCCAGCTTCTTTTTGTTACATCTCTCGTCATTCCACATaGCCGAGTCTTTGGTTCGTTGGATGTAAATCTCTACACAGTCCT | + |
Preference number: 5 (lower is better) Translates to: STEPASFCYISRHST*PSLWFVGCKSLHSP Trigger: AGGACTGTGTAGAGATTTACATCCAACGAACCAAAGACTCGGGCATGTGGAATGACGAGAGATGTAACAAAAAGAAGCTGGCTCTGTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CCA 90 bp | TTGATCCCTTCAGTTCAAATCCTTCTTCGCAGGAGAACTCACAACTaGACCCATTTTGGAAAGGTCCAGAAGCACTGGGAAGACATTTCA | + |
Preference number: 5 (lower is better) Translates to: LIPSVQILLRRRTHN*THFGKVQKHWEDIS Trigger: TGAAATGTCTTCCCAGTGCTTCTGGACCTTTCCAAAATGGGTCCAGTTGTGAGTTCTCCTGCGAAGAAGGATTTGAACTGAAGGGATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CAA 90 bp | TGGCCTTGTCACTCAGTTTTGATCCATGGAGTCGGGATCCCAGTTTTTAAGCAGAGAGCCAGCTTCTTTTaGTTACATCTCTCGTCATTC | + |
Preference number: 5 (lower is better) Translates to: WPCHSVLIHGVGIPVFKQRASFF*LHLSSF Trigger: GAATGACGAGAGATGTAACAAAAAGAAGCTGGCTCT...CTGCTTAAAAACTGGGATCCCGACTCCATGGATCAAAACTGAGTGACAAGGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CAA 90 bp | CTGAGTCATTCTAGTAGAGGGCTGGCCTTGTCACTCAGTTTTGATCCATGGAGTCACACTGAAGTCTTCTaGATCCCTTCAGTTCAAATC | + |
Preference number: 5 (lower is better) Translates to: LSHSSRGLALSLSFDPWSHTEVF*IPSVQI Trigger: GATTTGAACTGAAGGGATCAAGAAGACTTCAGTGTG...ACTCCATGGATCAAAACTGAGTGACAAGGCCAGCCCTCTACTAGAATGACTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CAA 90 bp | GAGTCGGGATCCCAGTTTTTAAGCAGGCAAGAGGAACCAGGATTCTGTAGACAGCAGGAACAAATTTCTTaGCTTTCTTCCGAAAGTATC | + |
Preference number: 5 (lower is better) Translates to: ESGSQFLSRQEEPGFCRQQEQIS*LSSESI Trigger: GATACTTTCGGAAGAAAGCAAAGAAATTTGTTCCTG...CTGTCTACAGAATCCTGGTTCCTCTTGCCTGCTTAAAAACTGGGATCCCGACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CAA 90 bp | GGATCTCATGCTGGCTTCAGTGCCAGGACACAGAACACAATGTTCAAGAATACTACAGTCCTCATTTCTTaGTTTGTTGTTTGGTTCACC | + |
Preference number: 5 (lower is better) Translates to: GSHAGFSARTQNTMFKNTTVLIS*FVVWFT Trigger: GGTGAACCAAACAACAAACAAAGAAATGAGGACTGT...AGTATTCTTGAACATTGTGTTCTGTGTCCTGGCACTGAAGCCAGCATGAGATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CAA 90 bp | TTCAGCTTATCATTCTATTTCCCACGATGCATTTGTGTTCCTGATTGTTTTGAATTTGCAGACTGGGATTaGTGGTGTCCACTGCCCTTG | + |
Preference number: 5 (lower is better) Translates to: FSLSFYFPRCICVPDCFEFADWD*WCPLPL Trigger: CAAGGGCAGTGGACACCACAAATCCCAGTCTGCAAA...TTCAAAACAATCAGGAACACAAATGCATCGTGGGAAATAGAATGATAAGCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CAA 90 bp | TTCAGCTTATCATTCTATTTCCCACGATGCATTTGTGTTCCTGATTGTTTTGAAACAACTGGACCCATTTaGGAAAGGTCCAGAAGCACT | + |
Preference number: 5 (lower is better) Translates to: FSLSFYFPRCICVPDCFETTGPI*ERSRST Trigger: AGTGCTTCTGGACCTTTCCAAAATGGGTCCAGTTGT...TTCAAAACAATCAGGAACACAAATGCATCGTGGGAAATAGAATGATAAGCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS TCA 90 bp | CCATACGTTATTGACTTTTCTGATTCCAATCCAGTAGTAACTCGGTaGATGTTTCAGATTGGAGTTAAGGTAGTTGATCTCTTCCTTGTT | + |
Preference number: 5 (lower is better) Translates to: PYVIDFSDSNPVVTR*MFQIGVKVVDLFLV Trigger: AACAAGGAAGAGATCAACTACCTTAACTCCAATCTGAAACATTCACCGAGTTACTACTGGATTGGAATCAGAAAAGTCAATAACGTATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS-3UTR CAA 90 bp | TTCAGCTTATCATTCTATTTCCCACGATGCATTTGTGTTCCTGATTGTTTTGAATCCTCATTTCTTTGTTaGTTGTTTGGTTCACCTGGA | + |
Preference number: 5 (lower is better) Translates to: FSLSFYFPRCICVPDCFESSFLC*LFGSPG Trigger: TCCAGGTGAACCAAACAACAAACAAAGAAATGAGGA...TTCAAAACAATCAGGAACACAAATGCATCGTGGGAAATAGAATGATAAGCTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CCA 72 bp | GCGCACTCCACTCTCCAGAGGACGTACACCGCACGGTaGTCTCCATGCTGCTGGGCAGGTAGCCCCTTTTAC | + |
Preference number: 6 (lower is better) Translates to: AHSTLQRTYTAR*SPCCWAGSPFY Trigger: GTAAAAGGGGCTACCTGCCCAGCAGCATGGAGACCACCGTGCGGTGTACGTCCTCTGGAGAGTGGAGTGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CCA 72 bp | AGAAAGTGCAACTACCAAGGGACGGGTGGGGCTGACTaGGGCTTCACAGGTAGGCGGCATCCCAGACCAGCG | + |
Preference number: 6 (lower is better) Translates to: RKCNYQGTGGAD*GFTGRRHPRPA Trigger: CGCTGGTCTGGGATGCCGCCTACCTGTGAAGCCCCAGTCAGCCCCACCCGTCCCTTGGTAGTTGCACTTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS GCA 72 bp | CTCCAGAGGACGTACACCGCACGGTGGTCTCCATGCTaGTGGGCAGGTAGCCCCTTTTACAGCCAAAGGAGC | + |
Preference number: 6 (lower is better) Translates to: LQRTYTARWSPC*WAGSPFYSQRS Trigger: GCTCCTTTGGCTGTAAAAGGGGCTACCTGCCCAGCAGCATGGAGACCACCGTGCGGTGTACGTCCTCTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CCA 72 bp | CAGAGGACGTACACCGCACGGTGGTCTCCATGCTGCTaGGCAGGTAGCCCCTTTTACAGCCAAAGGAGCAGG | + |
Preference number: 6 (lower is better) Translates to: QRTYTARWSPCC*AGSPFYSQRSR Trigger: CCTGCTCCTTTGGCTGTAAAAGGGGCTACCTGCCCAGCAGCATGGAGACCACCGTGCGGTGTACGTCCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS GCA 72 bp | ACTCTCCAGAGGACGTACACCGCACGGTGGTCTCCATaGTGCTGGGCAGGTAGCCCCTTTTACAGCCAAAGG | + |
Preference number: 6 (lower is better) Translates to: TLQRTYTARWSP*CWAGSPFYSQR Trigger: CCTTTGGCTGTAAAAGGGGCTACCTGCCCAGCAGCATGGAGACCACCGTGCGGTGTACGTCCTCTGGAGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS GCA 72 bp | TGTGGTGTCCACTGCCCTTGTGCGCTGCATTCAACCTaGGCTGGCCCCTGCAACGTGAAACTCTGCTCACAG | + |
Preference number: 6 (lower is better) Translates to: CGVHCPCALHST*AGPCNVKLCSQ Trigger: CTGTGAGCAGAGTTTCACGTTGCAGGGGCCAGCGCAGGTTGAATGCAGCGCACAAGGGCAGTGGACACCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS GCA 72 bp | TGGACAGCTTTGCAGACTGGGATTTGTGGTGTCCACTaGCCTTGTGCGCTGCATTCAACCTGCGCTGGCCCC | + |
Preference number: 6 (lower is better) Translates to: WTALQTGICGVH*PCALHSTCAGP Trigger: GGGGCCAGCGCAGGTTGAATGCAGCGCACAAGGGCAGTGGACACCACAAATCCCAGTCTGCAAAGCTGTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CCA 72 bp | TGTCCACTGCCCTTGTGCGCTGCATTCAACCTGCGCTaGCCCCTGCAACGTGAAACTCTGCTCACAGGTGAA | + |
Preference number: 6 (lower is better) Translates to: CPLPLCAAFNLR*PLQRETLLTGE Trigger: TTCACCTGTGAGCAGAGTTTCACGTTGCAGGGGCCAGCGCAGGTTGAATGCAGCGCACAAGGGCAGTGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CAA 72 bp | AGCTTTGCAGACTGGGATTTGTGGTGTCCACTGCCCTaGTGCGCTGCATTCAACCTGCGCTGGCCCCTGCAA | + |
Preference number: 6 (lower is better) Translates to: SFADWDLWCPLP*CAAFNLRWPLQ Trigger: TTGCAGGGGCCAGCGCAGGTTGAATGCAGCGCACAAGGGCAGTGGACACCACAAATCCCAGTCTGCAAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CAA 72 bp | CTTTCCCGGGACGTCAAGGCTTGGACATTGTACCACTaGGCAGGAGGGGACTTCCTGGGTCCACTTTCCCTG | + |
Preference number: 6 (lower is better) Translates to: LSRDVKAWTLYH*AGGDFLGPLSL Trigger: CAGGGAAAGTGGACCCAGGAAGTCCCCTCCTGCCAAGTGGTACAATGTCCAAGCCTTGACGTCCCGGGAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CAA 90 bp | CAGGCTTCCATAGTCAGGGTGTTCCTGTGGTTTGCAAGTCACAGCTaGCTCACAGTTGGGTCCCAGGAAGCCAGGGTGGCACTTGCAGGT | + |
Preference number: 6 (lower is better) Translates to: QASIVRVFLWFASHS*LTVGSQEARVALAG Trigger: ACCTGCAAGTGCCACCCTGGCTTCCTGGGACCCAACTGTGAGCAAGCTGTGACTTGCAAACCACAGGAACACCCTGACTATGGAAGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CAA 90 bp | ACACTGGACAGCTTTGCAGACTGGGATTTGTGGTGTCCACTGCCCTaGTGCGCTGCATTCAACCTGCGCTGGCCCCTGCAACGTGAAACT | + |
Preference number: 6 (lower is better) Translates to: TLDSFADWDLWCPLP*CAAFNLRWPLQRET Trigger: AGTTTCACGTTGCAGGGGCCAGCGCAGGTTGAATGCAGCGCACAAGGGCAGTGGACACCACAAATCCCAGTCTGCAAAGCTGTCCAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CAA 90 bp | GCTGCAGCTCATGTTCATCTTTCCCGGGACGTCAAGGCTTGGACATaGTACCACTTGGCAGGAGGGGACTTCCTGGGTCCACTTTCCCTG | + |
Preference number: 6 (lower is better) Translates to: AAAHVHLSRDVKAWT*YHLAGGDFLGPLSL Trigger: CAGGGAAAGTGGACCCAGGAAGTCCCCTCCTGCCAAGTGGTACAATGTCCAAGCCTTGACGTCCCGGGAAAGATGAACATGAGCTGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CAA 90 bp | CTGTTCCGCTGCAGCTCATGTTCATCTTTCCCGGGACGTCAAGGCTaGGACATTGTACCACTTGGCAGGAGGGGACTTCCTGGGTCCACT | + |
Preference number: 6 (lower is better) Translates to: LFRCSSCSSFPGRQG*DIVPLGRRGLPGST Trigger: AGTGGACCCAGGAAGTCCCCTCCTGCCAAGTGGTACAATGTCCAAGCCTTGACGTCCCGGGAAAGATGAACATGAGCTGCAGCGGAACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS GCA 72 bp | TGCCCTTGTGCGCTGCATTCAACCTGCGCTGGCCCCTaGAACGTGAAACTCTGCTCACAGGTGAAGTTACAG | + |
Preference number: 6 (lower is better) Translates to: CPCALHSTCAGP*NVKLCSQVKLQ Trigger: CTGTAACTTCACCTGTGAGCAGAGTTTCACGTTGCAGGGGCCAGCGCAGGTTGAATGCAGCGCACAAGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CCA 72 bp | GTTCCTGTGGTTTGCAAGTCACAGCTTGCTCACAGTTaGGTCCCAGGAAGCCAGGGTGGCACTTGCAGGTGT | + |
Preference number: 6 (lower is better) Translates to: VPVVCKSQLAHS*VPGSQGGTCRC Trigger: ACACCTGCAAGTGCCACCCTGGCTTCCTGGGACCCAACTGTGAGCAAGCTGTGACTTGCAAACCACAGGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CCA 72 bp | GTGGGTCAAAGCTTCACATTCAACCACATGGCAGGCTaGAGCAGGCGCACTCCACTCTCCAGAGGACGTACA | + |
Preference number: 6 (lower is better) Translates to: VGQSFTFNHMAG*SRRTPLSRGRT Trigger: TGTACGTCCTCTGGAGAGTGGAGTGCGCCTGCTCCAGCCTGCCATGTGGTTGAATGTGAAGCTTTGACCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CAA 90 bp | ATGTTGCCCTGCTGTGGCGCAGATAAGGCTTCACACTGGACAGCTTaGCAGACTGGGATTTGTGGTGTCCACTGCCCTTGTGCGCTGCAT | + |
Preference number: 6 (lower is better) Translates to: MLPCCGADKASHWTA*QTGICGVHCPCALH Trigger: ATGCAGCGCACAAGGGCAGTGGACACCACAAATCCCAGTCTGCAAAGCTGTCCAGTGTGAAGCCTTATCTGCGCCACAGCAGGGCAACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS TCA 72 bp | CCCTTTTACAGCCAAAGGAGCAGGAGGAATTATAGCTaGAGGGGCCGAACGGGTGGGAGCAGTTCAGGCTTC | + |
Preference number: 6 (lower is better) Translates to: PFYSQRSRRNYS*RGRTGGSSSGF Trigger: GAAGCCTGAACTGCTCCCACCCGTTCGGCCCCTTCAGCTATAATTCCTCCTGCTCCTTTGGCTGTAAAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS TCA 72 bp | CGTGCATGTCGTGTTCCATGGGTAGCTCCCAGGATTTaGGGAACATTTCCTGATACCGTGGGCAGGGTGGGT | + |
Preference number: 6 (lower is better) Translates to: RACRVPWVAPRI*GTFPDTVGRVG Trigger: ACCCACCCTGCCCACGGTATCAGGAAATGTTCCTCAAATCCTGGGAGCTACCCATGGAACACGACATGCACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS GCA 72 bp | CCCAGACCAGCGTCCCGTGGCACCACACGTCAGAACTaGAGATCCATTGAGTGTCCAATCATCAGGACATGT | + |
Preference number: 6 (lower is better) Translates to: PRPASRGTTRQN*RSIECPIIRTC Trigger: ACATGTCCTGATGATTGGACACTCAATGGATCTGCAGTTCTGACGTGTGGTGCCACGGGACGCTGGTCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CCA 72 bp | GGCTTCACACTGGACAGCTTTGCAGACTGGGATTTGTaGTGTCCACTGCCCTTGTGCGCTGCATTCAACCTG | + |
Preference number: 6 (lower is better) Translates to: GFTLDSFADWDL*CPLPLCAAFNL Trigger: CAGGTTGAATGCAGCGCACAAGGGCAGTGGACACCACAAATCCCAGTCTGCAAAGCTGTCCAGTGTGAAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CCA 72 bp | GCAGCTCATGTTCATCTTTCCCGGGACGTCAAGGCTTaGACATTGTACCACTTGGCAGGAGGGGACTTCCTG | + |
Preference number: 6 (lower is better) Translates to: AAHVHLSRDVKA*TLYHLAGGDFL Trigger: CAGGAAGTCCCCTCCTGCCAAGTGGTACAATGTCCAAGCCTTGACGTCCCGGGAAAGATGAACATGAGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CAA 72 bp | ATAGTCAGGGTGTTCCTGTGGTTTGCAAGTCACAGCTaGCTCACAGTTGGGTCCCAGGAAGCCAGGGTGGCA | + |
Preference number: 6 (lower is better) Translates to: IVRVFLWFASHS*LTVGSQEARVA Trigger: TGCCACCCTGGCTTCCTGGGACCCAACTGTGAGCAAGCTGTGACTTGCAAACCACAGGAACACCCTGACTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CAA 72 bp | CATGTTCATCTTTCCCGGGACGTCAAGGCTTGGACATaGTACCACTTGGCAGGAGGGGACTTCCTGGGTCCA | + |
Preference number: 6 (lower is better) Translates to: HVHLSRDVKAWT*YHLAGGDFLGP Trigger: TGGACCCAGGAAGTCCCCTCCTGCCAAGTGGTACAATGTCCAAGCCTTGACGTCCCGGGAAAGATGAACATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS GCA 72 bp | CTCCAACTCGCCTGTACCCTTCCACACAGTCAAACGTaGATGTCGTGTTCCATGGGTAGCTCCCAGGATTTG | + |
Preference number: 6 (lower is better) Translates to: LQLACTLPHSQT*MSCSMGSSQDL Trigger: CAAATCCTGGGAGCTACCCATGGAACACGACATGCACGTTTGACTGTGTGGAAGGGTACAGGCGAGTTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS GCA 72 bp | GGTCCAGAAGCACTGGGAAGACATTTCATGTTGCCCTaGTGTGGCGCAGATAAGGCTTCACACTGGACAGCT | + |
Preference number: 6 (lower is better) Translates to: GPEALGRHFMLP*CGADKASHWTA Trigger: AGCTGTCCAGTGTGAAGCCTTATCTGCGCCACAGCAGGGCAACATGAAATGTCTTCCCAGTGCTTCTGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CCA 72 bp | GGAGCAGTTCAGGCTTCCATAGTCAGGGTGTTCCTGTaGTTTGCAAGTCACAGCTTGCTCACAGTTGGGTCC | + |
Preference number: 6 (lower is better) Translates to: GAVQASIVRVFL*FASHSLLTVGS Trigger: GGACCCAACTGTGAGCAAGCTGTGACTTGCAAACCACAGGAACACCCTGACTATGGAAGCCTGAACTGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CCA 72 bp | ATGTTGCCCTGCTGTGGCGCAGATAAGGCTTCACACTaGACAGCTTTGCAGACTGGGATTTGTGGTGTCCAC | + |
Preference number: 6 (lower is better) Translates to: MLPCCGADKASH*TALQTGICGVH Trigger: GTGGACACCACAAATCCCAGTCTGCAAAGCTGTCCAGTGTGAAGCCTTATCTGCGCCACAGCAGGGCAACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CAA 72 bp | TGCTGTGGCGCAGATAAGGCTTCACACTGGACAGCTTaGCAGACTGGGATTTGTGGTGTCCACTGCCCTTGT | + |
Preference number: 6 (lower is better) Translates to: CCGADKASHWTA*QTGICGVHCPC Trigger: ACAAGGGCAGTGGACACCACAAATCCCAGTCTGCAAAGCTGTCCAGTGTGAAGCCTTATCTGCGCCACAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CAA 72 bp | TGCAGCTCATGTTCATCTTTCCCGGGACGTCAAGGCTaGGACATTGTACCACTTGGCAGGAGGGGACTTCCT | + |
Preference number: 6 (lower is better) Translates to: CSSCSSFPGRQG*DIVPLGRRGLP Trigger: AGGAAGTCCCCTCCTGCCAAGTGGTACAATGTCCAAGCCTTGACGTCCCGGGAAAGATGAACATGAGCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS GCA 72 bp | AGTTCAGGCTTCCATAGTCAGGGTGTTCCTGTGGTTTaGAAGTCACAGCTTGCTCACAGTTGGGTCCCAGGA | + |
Preference number: 6 (lower is better) Translates to: SSGFHSQGVPVV*KSQLAHSWVPG Trigger: TCCTGGGACCCAACTGTGAGCAAGCTGTGACTTGCAAACCACAGGAACACCCTGACTATGGAAGCCTGAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS GCA 72 bp | GGAAAGGTCCAGAAGCACTGGGAAGACATTTCATGTTaGCCTGCTGTGGCGCAGATAAGGCTTCACACTGGA | + |
Preference number: 6 (lower is better) Translates to: GKVQKHWEDISC*PAVAQIRLHTG Trigger: TCCAGTGTGAAGCCTTATCTGCGCCACAGCAGGGCAACATGAAATGTCTTCCCAGTGCTTCTGGACCTTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CAA 72 bp | TGGAAAGGTCCAGAAGCACTGGGAAGACATTTCATGTaGCCCTGCTGTGGCGCAGATAAGGCTTCACACTGG | + |
Preference number: 6 (lower is better) Translates to: WKGPEALGRHFM*PCCGADKASHW Trigger: CCAGTGTGAAGCCTTATCTGCGCCACAGCAGGGCAACATGAAATGTCTTCCCAGTGCTTCTGGACCTTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS TCA 72 bp | TCCATGGGTAGCTCCCAGGATTTGAGGAACATTTCCTaGTACCGTGGGCAGGGTGGGTCAAAGCTTCACATT | + |
Preference number: 6 (lower is better) Translates to: SMGSSQDLRNIS*YRGQGGSKLHI Trigger: AATGTGAAGCTTTGACCCACCCTGCCCACGGTATCAGGAAATGTTCCTCAAATCCTGGGAGCTACCCATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS GCA 72 bp | CATTCAACCTGCGCTGGCCCCTGCAACGTGAAACTCTaGTCACAGGTGAAGTTACAGGATGACTTAAACGCA | + |
Preference number: 6 (lower is better) Translates to: HSTCAGPCNVKL*SQVKLQDDLNA Trigger: TGCGTTTAAGTCATCCTGTAACTTCACCTGTGAGCAGAGTTTCACGTTGCAGGGGCCAGCGCAGGTTGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS TCA 72 bp | TTATCCCAGATGCCAGATGAGGTACACTGTAGATTCTaGGCTCCAACTCGCCTGTACCCTTCCACACAGTCA | + |
Preference number: 6 (lower is better) Translates to: LSQMPDEVHCRF*APTRLYPSTQS Trigger: TGACTGTGTGGAAGGGTACAGGCGAGTTGGAGCTCAGAATCTACAGTGTACCTCATCTGGCATCTGGGATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS GCA 72 bp | ATCAGGACATGTAAACTCACACACTGTGCCGAAAACTaGTGTTCCGCTGCAGCTCATGTTCATCTTTCCCGG | + |
Preference number: 6 (lower is better) Translates to: IRTCKLTHCAEN*CSAAAHVHLSR Trigger: CCGGGAAAGATGAACATGAGCTGCAGCGGAACAGCAGTTTTCGGCACAGTGTGTGAGTTTACATGTCCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CCA 72 bp | TCTCTATGCATTCACCATGACCACTGCAGGATGCATTaGTACACGAAGCTGTGTAGCACAGAGCCAGCTTCT | + |
Preference number: 6 (lower is better) Translates to: SLCIHHDHCRMH*YTKLCSTEPAS Trigger: AGAAGCTGGCTCTGTGCTACACAGCTTCGTGTACCAATGCATCCTGCAGTGGTCATGGTGAATGCATAGAGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS TCA 72 bp | GGTCCACTTTCCCTGAGATGTGCACTCAAGTTGAGCTaGGCCATGCAAGCTAAAGCCCTCATTGCATTGAAA | + |
Preference number: 6 (lower is better) Translates to: GPLSLRCALKLS*AMQAKALIALK Trigger: TTTCAATGCAATGAGGGCTTTAGCTTGCATGGCTCAGCTCAACTTGAGTGCACATCTCAGGGAAAGTGGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS GCA 72 bp | TCACAGCTTTGCATGATGGCGTCTCGTTATCCCAGATaGCAGATGAGGTACACTGTAGATTCTGAGCTCCAA | + |
Preference number: 6 (lower is better) Translates to: SQLCMMASRYPR*QMRYTVDSELQ Trigger: TTGGAGCTCAGAATCTACAGTGTACCTCATCTGGCATCTGGGATAACGAGACGCCATCATGCAAAGCTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CAA 90 bp | CAGTTCAAATCCTTCTTCGCAGGAGAACTCACAACTGGACCCATTTaGGAAAGGTCCAGAAGCACTGGGAAGACATTTCATGTTGCCCTG | + |
Preference number: 6 (lower is better) Translates to: QFKSFFAGELTTGPI*ERSRSTGKTFHVAL Trigger: CAGGGCAACATGAAATGTCTTCCCAGTGCTTCTGGACCTTTCCAAAATGGGTCCAGTTGTGAGTTCTCCTGCGAAGAAGGATTTGAACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS GCA 72 bp | GGAGTTAAGGTAGTTGATCTCTTCCTTGTTCTGAATTaGCACCAGATGTGTGTAGTCCCGCTGACAGTATGC | + |
Preference number: 6 (lower is better) Translates to: GVKVVDLFLVLN*HQMCVVPLTVC Trigger: GCATACTGTCAGCGGGACTACACACATCTGGTGGCAATTCAGAACAAGGAAGAGATCAACTACCTTAACTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CAA 72 bp | TCCTTCTTCGCAGGAGAACTCACAACTGGACCCATTTaGGAAAGGTCCAGAAGCACTGGGAAGACATTTCAT | + |
Preference number: 6 (lower is better) Translates to: SFFAGELTTGPI*ERSRSTGKTFH Trigger: ATGAAATGTCTTCCCAGTGCTTCTGGACCTTTCCAAAATGGGTCCAGTTGTGAGTTCTCCTGCGAAGAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS TCA 72 bp | ATGCAAGCTAAAGCCCTCATTGCATTGAAAGGCACATaGGGACTTGTAGGTGAATTCTCCAGTAGTAGCATG | + |
Preference number: 6 (lower is better) Translates to: MQAKALIALKGT*GLVGEFSSSSM Trigger: CATGCTACTACTGGAGAATTCACCTACAAGTCCTCATGTGCCTTTCAATGCAATGAGGGCTTTAGCTTGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CCA 72 bp | TGTTACATCTCTCGTCATTCCACATGCCCGAGTCTTTaGTTCGTTGGATGTAAATCTCTACACAGTCCTCAT | + |
Preference number: 6 (lower is better) Translates to: CYISRHSTCPSL*FVGCKSLHSPH Trigger: ATGAGGACTGTGTAGAGATTTACATCCAACGAACCAAAGACTCGGGCATGTGGAATGACGAGAGATGTAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS GCA 72 bp | CCAGCTTCTTTTTGTTACATCTCTCGTCATTCCACATaGCCGAGTCTTTGGTTCGTTGGATGTAAATCTCTA | + |
Preference number: 6 (lower is better) Translates to: PASFCYISRHST*PSLWFVGCKSL Trigger: TAGAGATTTACATCCAACGAACCAAAGACTCGGGCATGTGGAATGACGAGAGATGTAACAAAAAGAAGCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CAA 72 bp | GACGTTGTAAGAAGGCACATGGTAGTTTTCAAACGATaGAAGGCTTTGGCAGCTGCTAGCAGGAACAAATTT | + |
Preference number: 6 (lower is better) Translates to: DVVRRHMVVFKR*KALAAASRNKF Trigger: AAATTTGTTCCTGCTAGCAGCTGCCAAAGCCTTCAATCGTTTGAAAACTACCATGTGCCTTCTTACAACGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CAA 90 bp | GACGTTGTAAGAAGGCACATGGTAGTTTTCAAACGATTGAAGGCTTaGGCAGCTGCTAGCAGGAACAAATTTCTTTGCTTTCTTCCGAAA | + |
Preference number: 6 (lower is better) Translates to: DVVRRHMVVFKRLKA*AAASRNKFLCFLPK Trigger: TTTCGGAAGAAAGCAAAGAAATTTGTTCCTGCTAGCAGCTGCCAAAGCCTTCAATCGTTTGAAAACTACCATGTGCCTTCTTACAACGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS CAA 72 bp | AGAAGGCACATGGTAGTTTTCAAACGATTGAAGGCTTaGGCAGCTGCTAGCAGGAACAAATTTCTTTGCTTT | + |
Preference number: 6 (lower is better) Translates to: RRHMVVFKRLKA*AAASRNKFLCF Trigger: AAAGCAAAGAAATTTGTTCCTGCTAGCAGCTGCCAAAGCCTTCAATCGTTTGAAAACTACCATGTGCCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |
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CDS TCA 72 bp | ATTGACTTTTCTGATTCCAATCCAGTAGTAACTCGGTaGATGTTTCAGATTGGAGTTAAGGTAGTTGATCTC | + |
Preference number: 6 (lower is better) Translates to: IDFSDSNPVVTR*MFQIGVKVVDL Trigger: GAGATCAACTACCTTAACTCCAATCTGAAACATTCACCGAGTTACTACTGGATTGGAATCAGAAAAGTCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027874.6 |