Pregenerated sensors for SEH1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079614Ensembl transcript IDs: ENSMUST00000025421.9, ENSMUST00000237700.2
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGGCCGAGAGAGGTATCCTCTGCGAGGGTGAGGATACTGGAGGTTaGCATCGCAAGAGTGCTCTAGCAGAGGAGCAGGAGGAGGAAGGA | + |
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Preference number: 1 (lower is better) Translates to: EAERGILCEGEDTGG*HRKSALAEEQEEEG Trigger: TCCTTCCTCCTCCTGCTCCTCTGCTAGAGCACTCTTGCGATGCCAACCTCCAGTATCCTCACCCTCGCAGAGGATACCTCTCTCGGCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| 3UTR TCA 90 bp | TCAGGTAAGGGGTTAAGAGGCCGAGAGAGGTATCCTCTGCGAGGGTaGGGATACTGGAGGTTGGCATCGCAAGAGTGCTCTAGCAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: SGKGLRGRERYPLRG*GYWRLASQECSSRG Trigger: TCCTCTGCTAGAGCACTCTTGCGATGCCAACCTCCAGTATCCTCACCCTCGCAGAGGATACCTCTCTCGGCCTCTTAACCCCTTACCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| 3UTR CCA 90 bp | CTGACTAGTACAAAAGTTATATACACTGTCACTTTAAAGGCCTTTTaGACTGTGTGTAGTAGTGAACGGGCTGCTGGTGCATCTTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: LTSTKVIYTVTLKAF*TVCSSERAAGASWK Trigger: CTTCCAAGATGCACCAGCAGCCCGTTCACTACTACACACAGTCCAAAAGGCCTTTAAAGTGACAGTGTATATAACTTTTGTACTAGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| 3UTR TCA 90 bp | CAGAGACATTCATTTTATAAATGTGAAGCCTTGTCTAATCCCATCTaGTTCTTTCATTTACATTGCTTTCCACTGTCAGCAGTCCTGCAT | + |
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Preference number: 1 (lower is better) Translates to: QRHSFYKCEALSNPI*FFHLHCFPLSAVLH Trigger: ATGCAGGACTGCTGACAGTGGAAAGCAATGTAAATGAAAGAATCAGATGGGATTAGACAAGGCTTCACATTTATAAAATGAATGTCTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| 3UTR-3UTR CCA 90 bp | TTACATTGCTTTCCACTGTCAGCAGTCCTGCATGTGCTGCAGCGGCAGGCACACGAGATCAAACGGCGCTaGGGAAGGGGAAAAGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: LHCFPLSAVLHVLQRQAHEIKRR*GRGKGV Trigger: AACTCCTTTTCCCCTTCCCCAGCGCCGTTTGATCTC...GTGTGCCTGCCGCTGCAGCACATGCAGGACTGCTGACAGTGGAAAGCAATGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGTGAAGTTCACAATGATACGCTCTCCTATGAAGCTACCTATCAACAGACAACAGTCCTGCATGTGCTaGAGCGGCAGGCACACCTCC | + |
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Preference number: 2 (lower is better) Translates to: RVKFTMIRSPMKLPINRQQSCMC*SGRHTS Trigger: GGAGGTGTGCCTGCCGCTGCAGCACATGCAGGACTG...TTGTCTGTTGATAGGTAGCTTCATAGGAGAGCGTATCATTGTGAACTTCACTCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGTGAAGTTCACAATGATACGCTCTCCTATGAAGCTACCTATCAACAGACAACAGCAGTCCTGCATGTaGTGCAGCGGCAGGCACACC | + |
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Preference number: 2 (lower is better) Translates to: RVKFTMIRSPMKLPINRQQQSCM*CSGRHT Trigger: GGTGTGCCTGCCGCTGCAGCACATGCAGGACTGCTG...TTGTCTGTTGATAGGTAGCTTCATAGGAGAGCGTATCATTGTGAACTTCACTCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| 3UTR-3UTR CCA 90 bp | ACGCTCTCCTATGAAGCTACCTATCAACAGACAAACCTGAACTCTATGGTAACAGGAGCTGGGCACAACTaGACCATCTTGATCCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: TLSYEATYQQTNLNSMVTGAGHN*TILIQP Trigger: GGGCTGGATCAAGATGGTCCAGTTGTGCCCAGCTCC...TGTTACCATAGAGTTCAGGTTTGTCTGTTGATAGGTAGCTTCATAGGAGAGCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| 3UTR-3UTR CCA 90 bp | ATCCGTAACTCCACTTCCAAAACACTTGACTCTTTGGCCTCCCCAAACATTGCACATAAAAAGTGTGCATaGGGGCAGGGAAGGAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: IRNSTSKTLDSLASPNIAHKKCA*GQGRRF Trigger: AAACCTCCTTCCCTGCCCCCATGCACACTTTTTATG...TGCAATGTTTGGGGAGGCCAAAGAGTCAAGTGTTTTGGAAGTGGAGTTACGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGTGAAGTTCACAATGATACGCTCTCCTATGAAGCTACCTATCAACAGACAAGCTGCTGGTGCATCTTaGAAGAGATCAAACGGCGCT | + |
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Preference number: 2 (lower is better) Translates to: RVKFTMIRSPMKLPINRQAAGAS*KRSNGA Trigger: AGCGCCGTTTGATCTCTTCCAAGATGCACCAGCAGC...TTGTCTGTTGATAGGTAGCTTCATAGGAGAGCGTATCATTGTGAACTTCACTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| 3UTR-3UTR GCA 90 bp | GTTTTGGTGATGATGTGTCAACAAAAAGCCTTTCCATTTATAGTGTCAGGAGGCCCATTCCTGTGTGCATaGAACAAGCAGCAAAACAGC | + |
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Preference number: 2 (lower is better) Translates to: VLVMMCQQKAFPFIVSGGPFLCA*NKQQNS Trigger: GCTGTTTTGCTGCTTGTTGCATGCACACAGGAATGG...GCCTCCTGACACTATAAATGGAAAGGCTTTTTGTTGACACATCATCACCAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| 3UTR-3UTR TCA 90 bp | ACGCTCTCCTATGAAGCTACCTATCAACAGACAAACCTGAACTCTATGGTAACAGTAATGGGTATGAGATaGAAACTTAGAAGTGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: TLSYEATYQQTNLNSMVTVMGMR*KLRSVS Trigger: GGAAACACTTCTAAGTTTTCATCTCATACCCATTAC...TGTTACCATAGAGTTCAGGTTTGTCTGTTGATAGGTAGCTTCATAGGAGAGCGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| 3UTR-3UTR TCA 90 bp | AGTCGTTGTGTGGATAATATCACCTATAGAGCAATTCTACAAAAGGTAAACACAAAGGGGAAAAGGAGTTaGTTTCCATTCCTGTGTGCA | + |
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Preference number: 2 (lower is better) Translates to: SRCVDNITYRAILQKVNTKGKRS*FPFLCA Trigger: TGCACACAGGAATGGAAATCAACTCCTTTTCCCCTT...TGTGTTTACCTTTTGTAGAATTGCTCTATAGGTGATATTATCCACACAACGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| 3UTR-3UTR TCA 90 bp | AGAGTGAAGTTCACAATGATACGCTCTCCTATGAAGCTACCTATCAACAGACAATTGGTTTCAAACACTTaGGTTGTGATACATGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: RVKFTMIRSPMKLPINRQLVSNT*VVIHAR Trigger: TCTTGCATGTATCACAACTCAAGTGTTTGAAACCAA...TTGTCTGTTGATAGGTAGCTTCATAGGAGAGCGTATCATTGTGAACTTCACTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| 3UTR-3UTR CCA 90 bp | AGAGTGAAGTTCACAATGATACGCTCTCCTATGAAGCTACCTATCAACAGACAAACTTTAAAGGCCTTTTaGACTGTGTGTAGTAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: RVKFTMIRSPMKLPINRQTLKAF*TVCSSE Trigger: TTCACTACTACACACAGTCCAAAAGGCCTTTAAAGT...TTGTCTGTTGATAGGTAGCTTCATAGGAGAGCGTATCATTGTGAACTTCACTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| 3UTR-3UTR CCA 90 bp | ACGCTCTCCTATGAAGCTACCTATCAACAGACAAACCTGAACTCTATGGTAACATGTAAAGTCGTTGTGTaGATAATATCACCTATAGAG | + |
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Preference number: 2 (lower is better) Translates to: TLSYEATYQQTNLNSMVTCKVVV*IISPIE Trigger: CTCTATAGGTGATATTATCCACACAACGACTTTACA...TGTTACCATAGAGTTCAGGTTTGTCTGTTGATAGGTAGCTTCATAGGAGAGCGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| 3UTR-3UTR GCA 90 bp | AGTCGTTGTGTGGATAATATCACCTATAGAGCAATTCTACAAAAGGTAAACACAATTTCCATTCCTGTGTaGATGCAACAAGCAGCAAAA | + |
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Preference number: 2 (lower is better) Translates to: SRCVDNITYRAILQKVNTISIPV*MQQAAK Trigger: TTTTGCTGCTTGTTGCATGCACACAGGAATGGAAAT...TGTGTTTACCTTTTGTAGAATTGCTCTATAGGTGATATTATCCACACAACGACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| 3UTR-3UTR TCA 90 bp | ATCACCTGTAAAGTCGTTGTGTGGATAATATCACCTATAGAGCAATTCTACAAAATAGTGTCAGGAGGCTaGCTAGTACAAAAGTTATAT | + |
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Preference number: 2 (lower is better) Translates to: ITCKVVVWIISPIEQFYKIVSGG*LVQKLY Trigger: ATATAACTTTTGTACTAGTCAGCCTCCTGACACTAT...TTTGTAGAATTGCTCTATAGGTGATATTATCCACACAACGACTTTACAGGTGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| 3UTR TCA 72 bp | GGGTTAAGAGGCCGAGAGAGGTATCCTCTGCGAGGGTaGGGATACTGGAGGTTGGCATCGCAAGAGTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: GLRGRERYPLRG*GYWRLASQECS Trigger: AGAGCACTCTTGCGATGCCAACCTCCAGTATCCTCACCCTCGCAGAGGATACCTCTCTCGGCCTCTTAACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| 3UTR CCA 72 bp | AGAGGTATCCTCTGCGAGGGTGAGGATACTGGAGGTTaGCATCGCAAGAGTGCTCTAGCAGAGGAGCAGGAG | + |
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Preference number: 3 (lower is better) Translates to: RGILCEGEDTGG*HRKSALAEEQE Trigger: CTCCTGCTCCTCTGCTAGAGCACTCTTGCGATGCCAACCTCCAGTATCCTCACCCTCGCAGAGGATACCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| 3UTR GCA 72 bp | AGAGGTGGCTCAGCAATTAAGGGCCCTGGCTGCTCTTaGAAAGGACCCAGGTTTGATTCTGAGCACCCACAT | + |
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Preference number: 3 (lower is better) Translates to: RGGSAIKGPGCS*KGPRFDSEHPH Trigger: ATGTGGGTGCTCAGAATCAAACCTGGGTCCTTTGCAAGAGCAGCCAGGGCCCTTAATTGCTGAGCCACCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
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| 3UTR-3UTR CAA 90 bp | ACGCTCTCCTATGAAGCTACCTATCAACAGACAAACCTGAACTCTATGGTAACAGGCTGCTGGTGCATCTaGGAAGAGATCAAACGGCGC | + |
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Preference number: 3 (lower is better) Translates to: TLSYEATYQQTNLNSMVTGCWCI*EEIKRR Trigger: GCGCCGTTTGATCTCTTCCAAGATGCACCAGCAGCC...TGTTACCATAGAGTTCAGGTTTGTCTGTTGATAGGTAGCTTCATAGGAGAGCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| 3UTR CCA 72 bp | GAATCCGTAACTCCACTTCCAAAACACTTGACTCTTTaGCCTCCCCAAACATTGCACACATTATGGAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: ESVTPLPKHLTL*PPQTLHTLWSR Trigger: TCTGCTCCATAATGTGTGCAATGTTTGGGGAGGCCAAAGAGTCAAGTGTTTTGGAAGTGGAGTTACGGATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
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| 3UTR-3UTR CAA 90 bp | ACGCTCTCCTATGAAGCTACCTATCAACAGACAAACCTGAACTCTATGGTAACATACAAGGCAGGCACTTaGAATCAGATACTGGGAATC | + |
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Preference number: 3 (lower is better) Translates to: TLSYEATYQQTNLNSMVTYKAGT*NQILGI Trigger: GATTCCCAGTATCTGATTCAAAGTGCCTGCCTTGTA...TGTTACCATAGAGTTCAGGTTTGTCTGTTGATAGGTAGCTTCATAGGAGAGCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| 3UTR GCA 72 bp | GTGCTGCTTGGCTACAAACCATTGTATAGACTGTGGTaGCAGGTTACTAGTATTTTTAATTACAAGAAAAAG | + |
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Preference number: 3 (lower is better) Translates to: VLLGYKPLYRLW*QVTSIFNYKKK Trigger: CTTTTTCTTGTAATTAAAAATACTAGTAACCTGGCACCACAGTCTATACAATGGTTTGTAGCCAAGCAGCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| 3UTR CCA 72 bp | CATTGTGTGGATAATATCACCTGTAAAGTCGTTGTGTaGATAATATCACCTATAGAGCAATTCTACAAAAGG | + |
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Preference number: 3 (lower is better) Translates to: HCVDNITCKVVV*IISPIEQFYKR Trigger: CCTTTTGTAGAATTGCTCTATAGGTGATATTATCCACACAACGACTTTACAGGTGATATTATCCACACAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| 3UTR CCA 72 bp | AATGTGCTGCTTGGCTACAAACCATTGTATAGACTGTaGTGCCAGGTTACTAGTATTTTTAATTACAAGAAA | + |
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Preference number: 3 (lower is better) Translates to: NVLLGYKPLYRL*CQVTSIFNYKK Trigger: TTTCTTGTAATTAAAAATACTAGTAACCTGGCACCACAGTCTATACAATGGTTTGTAGCCAAGCAGCACATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| CDS-3UTR CCA 90 bp | TTACATTGCTTTCCACTGTCAGCAGTCCTGCATGTGCTGCAGCGGCAGGCACACGATCGCTGGAGCAGGTaGCCATCCGGCGCCCGTGGA | + |
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Preference number: 4 (lower is better) Translates to: LHCFPLSAVLHVLQRQAHDRWSR*PSGARG Trigger: TCCACGGGCGCCGGATGGCCACCTGCTCCAGCGATC...GTGTGCCTGCCGCTGCAGCACATGCAGGACTGCTGACAGTGGAAAGCAATGTAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| CDS-3UTR GCA 90 bp | GAGGTGGCTCAGCAATTAAGGGCCCTGGCTGCTCTTGCAAAGGACCCAGGTTTGCAGCTAGCTGTACAATaGCAGTCTCCGCTCTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: EVAQQLRALAALAKDPGLQLAVQ*QSPLSL Trigger: GAGCGAGAGCGGAGACTGGCATTGTACAGCTAGCTG...CAAACCTGGGTCCTTTGCAAGAGCAGCCAGGGCCCTTAATTGCTGAGCCACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
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| CDS-3UTR TCA 90 bp | TTACATTGCTTTCCACTGTCAGCAGTCCTGCATGTGCTGCAGCGGCAGGCACACTCTTATCCCACACCTTaGCGCTCTGATCGCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LHCFPLSAVLHVLQRQAHSYPTP*RSDRWS Trigger: GCTCCAGCGATCAGAGCGTCAAGGTGTGGGATAAGA...GTGTGCCTGCCGCTGCAGCACATGCAGGACTGCTGACAGTGGAAAGCAATGTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| CDS-3UTR CCA 90 bp | ATCCGTAACTCCACTTCCAAAACACTTGACTCTTTGGCCTCCCCAAACATTGCAGATCGCTGGAGCAGGTaGCCATCCGGCGCCCGTGGA | + |
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Preference number: 4 (lower is better) Translates to: IRNSTSKTLDSLASPNIADRWSR*PSGARG Trigger: TCCACGGGCGCCGGATGGCCACCTGCTCCAGCGATC...TGCAATGTTTGGGGAGGCCAAAGAGTCAAGTGTTTTGGAAGTGGAGTTACGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
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| CDS-3UTR TCA 90 bp | AGGAGAGGTGGCTCAGCAATTAAGGGCCCTGGCTGCTCTTGCAAAGGACCCAGGTTTGAGTTTCCCAGCTaGGAACTCCCATTTACTGGG | + |
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Preference number: 4 (lower is better) Translates to: RRGGSAIKGPGCSCKGPRFEFPS*ELPFTG Trigger: CCCAGTAAATGGGAGTTCTCAGCTGGGAAACTCAAA...CCTGGGTCCTTTGCAAGAGCAGCCAGGGCCCTTAATTGCTGAGCCACCTCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
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| CDS-3UTR GCA 90 bp | TTACATTGCTTTCCACTGTCAGCAGTCCTGCATGTGCTGCAGCGGCAGGCACACTCCAGGAAATGCAGCTaGAGCACAGCTTACACGAGA | + |
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Preference number: 4 (lower is better) Translates to: LHCFPLSAVLHVLQRQAHSRKCS*STAYTR Trigger: TCTCGTGTAAGCTGTGCTGCAGCTGCATTTCCTGGA...GTGTGCCTGCCGCTGCAGCACATGCAGGACTGCTGACAGTGGAAAGCAATGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| CDS-3UTR CCA 90 bp | CACCCTACACATAAAAAGTGTGCATGGGGGCAGGGAAGGAGGTTTCTAGTTTTTTGGATGAGGTCCTTGTaGTCCGCCGCGATGCTGCGC | + |
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Preference number: 4 (lower is better) Translates to: HPTHKKCAWGQGRRFLVFWMRSL*SAAMLR Trigger: GCGCAGCATCGCGGCGGACCACAAGGACCTCATCCA...AAAAACTAGAAACCTCCTTCCCTGCCCCCATGCACACTTTTTATGTGTAGGGTG 53% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
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| CDS-3UTR CCA 90 bp | AGGAGAGGTGGCTCAGCAATTAAGGGCCCTGGCTGCTCTTGCAAAGGACCCAGGGCTACTGCCAGGATGTaGAAAGATCTTCCCAAATTT | + |
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Preference number: 4 (lower is better) Translates to: RRGGSAIKGPGCSCKGPRATARM*KDLPKF Trigger: AAATTTGGGAAGATCTTTCCACATCCTGGCAGTAGC...CCTGGGTCCTTTGCAAGAGCAGCCAGGGCCCTTAATTGCTGAGCCACCTCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
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| CDS-3UTR TCA 90 bp | CTTTGGCCTCCCCAAACATTGCACACATTATGGAGCAGAGATATACAAGCAGGTAAGACACATCGTGGATaGGGTCCTTGTGGTCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: LWPPQTLHTLWSRDIQAGKTHRG*GPCGPP Trigger: CGGCGGACCACAAGGACCTCATCCACGATGTGTCTT...ACCTGCTTGTATATCTCTGCTCCATAATGTGTGCAATGTTTGGGGAGGCCAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
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| CDS-3UTR TCA 90 bp | CACCCTACACATAAAAAGTGTGCATGGGGGCAGGGAAGGAGGTTTCTAGTTTTTTCTTATCCCACACCTTaGCGCTCTGATCGCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: HPTHKKCAWGQGRRFLVFSYPTP*RSDRWS Trigger: GCTCCAGCGATCAGAGCGTCAAGGTGTGGGATAAGA...AAAAACTAGAAACCTCCTTCCCTGCCCCCATGCACACTTTTTATGTGTAGGGTG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
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| CDS-3UTR GCA 90 bp | CACCCTACACATAAAAAGTGTGCATGGGGGCAGGGAAGGAGGTTTCTAGTTTTTTTACACGAGACCTCGTaGTGCAGAGACCACTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: HPTHKKCAWGQGRRFLVFLHETS*CRDHWL Trigger: CAGCCAGTGGTCTCTGCAGCACGAGGTCTCGTGTAA...AAAAACTAGAAACCTCCTTCCCTGCCCCCATGCACACTTTTTATGTGTAGGGTG 50% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
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| CDS-3UTR GCA 90 bp | TTACATTGCTTTCCACTGTCAGCAGTCCTGCATGTGCTGCAGCGGCAGGCACACATCTTTGGTTGCTACTaGCAGGATGTGGAAAGATCT | + |
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Preference number: 4 (lower is better) Translates to: LHCFPLSAVLHVLQRQAHIFGCY*QDVERS Trigger: AGATCTTTCCACATCCTGGCAGTAGCAACCAAAGAT...GTGTGCCTGCCGCTGCAGCACATGCAGGACTGCTGACAGTGGAAAGCAATGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| CDS-3UTR CCA 90 bp | ACGCTCTCCTATGAAGCTACCTATCAACAGACAAACCTGAACTCTATGGTAACAGCCATCCGGCGCCCGTaGAAGTCGAAAGACACATCG | + |
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Preference number: 4 (lower is better) Translates to: TLSYEATYQQTNLNSMVTAIRRP*KSKDTS Trigger: CGATGTGTCTTTCGACTTCCACGGGCGCCGGATGGC...TGTTACCATAGAGTTCAGGTTTGTCTGTTGATAGGTAGCTTCATAGGAGAGCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| CDS-3UTR CCA 90 bp | CCCCAAACATTGCACACATTATGGAGCAGAGATATACAAGCAGGTAAAACACCCTTCCCACAGCGATCATaGGGGGATGAGCACGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: PQTLHTLWSRDIQAGKTPFPQRS*GDEHES Trigger: GCTCTCGTGCTCATCCCCCCATGATCGCTGTGGGAA...GGGTGTTTTACCTGCTTGTATATCTCTGCTCCATAATGTGTGCAATGTTTGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
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| CDS-3UTR TCA 90 bp | ACGCTCTCCTATGAAGCTACCTATCAACAGACAAACCTGAACTCTATGGTAACAAAGACACATCGTGGATaGGGTCCTTGTGGTCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: TLSYEATYQQTNLNSMVTKTHRG*GPCGPP Trigger: CGGCGGACCACAAGGACCTCATCCACGATGTGTCTT...TGTTACCATAGAGTTCAGGTTTGTCTGTTGATAGGTAGCTTCATAGGAGAGCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| CDS-3UTR GCA 90 bp | AGAGTGAAGTTCACAATGATACGCTCTCCTATGAAGCTACCTATCAACAGACAACACGAGACCTCGTGCTaGAGAGACCACTGGCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: RVKFTMIRSPMKLPINRQHETSC*RDHWLR Trigger: CCTCAGCCAGTGGTCTCTGCAGCACGAGGTCTCGTG...TTGTCTGTTGATAGGTAGCTTCATAGGAGAGCGTATCATTGTGAACTTCACTCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| CDS-3UTR CCA 90 bp | CTTTGGCCTCCCCAAACATTGCACACATTATGGAGCAGAGATATACAAGCAGGTTGCTGCAGAGACCACTaGCTGAGGTTCATCACATCG | + |
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Preference number: 4 (lower is better) Translates to: LWPPQTLHTLWSRDIQAGCCRDH*LRFITS Trigger: CGATGTGATGAACCTCAGCCAGTGGTCTCTGCAGCA...ACCTGCTTGTATATCTCTGCTCCATAATGTGTGCAATGTTTGGGGAGGCCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
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| CDS-3UTR CCA 90 bp | CTTTGGCCTCCCCAAACATTGCACACATTATGGAGCAGAGATATACAAGCAGGTGATGAGCACGAGAGCTaGAAGGGTTCCAGGAAATGC | + |
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Preference number: 4 (lower is better) Translates to: LWPPQTLHTLWSRDIQAGDEHES*KGSRKC Trigger: GCATTTCCTGGAACCCTTCCAGCTCTCGTGCTCATC...ACCTGCTTGTATATCTCTGCTCCATAATGTGTGCAATGTTTGGGGAGGCCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
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| CDS-3UTR CCA 90 bp | GAGGTGGCTCAGCAATTAAGGGCCCTGGCTGCTCTTGCAAAGGACCCAGGTTTGGATTTCAAATTTTGTTaGACCACCAGAGGAAGTAAG | + |
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Preference number: 4 (lower is better) Translates to: EVAQQLRALAALAKDPGLDFKFC*TTRGSK Trigger: CTTACTTCCTCTGGTGGTCCAACAAAATTTGAAATC...CAAACCTGGGTCCTTTGCAAGAGCAGCCAGGGCCCTTAATTGCTGAGCCACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
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| CDS-3UTR TCA 90 bp | CTTTGGCCTCCCCAAACATTGCACACATTATGGAGCAGAGATATACAAGCAGGTGTCCTCTTCACCCAGTaGCTCTGTCCTCGAAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LWPPQTLHTLWSRDIQAGVLFTQ*LCPRSL Trigger: TAAACTTCGAGGACAGAGTCACTGGGTGAAGAGGAC...ACCTGCTTGTATATCTCTGCTCCATAATGTGTGCAATGTTTGGGGAGGCCAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
||
| CDS-3UTR GCA 90 bp | CACCCTACACATAAAAAGTGTGCATGGGGGCAGGGAAGGAGGTTTCTAGTTTTTAAGGGTTCCAGGAAATaGAGCTGCAGCACAGCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: HPTHKKCAWGQGRRFLVFKGSRK*SCSTAY Trigger: GTAAGCTGTGCTGCAGCTGCATTTCCTGGAACCCTT...AAAAACTAGAAACCTCCTTCCCTGCCCCCATGCACACTTTTTATGTGTAGGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
||
| CDS-3UTR TCA 90 bp | CTTTGGCCTCCCCAAACATTGCACACATTATGGAGCAGAGATATACAAGCAGGTTACTATACCATCTGCTaGACAGGTGGCCAACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LWPPQTLHTLWSRDIQAGYYTIC*TGGQHQ Trigger: CTGATGTTGGCCACCTGTTCAGCAGATGGTATAGTA...ACCTGCTTGTATATCTCTGCTCCATAATGTGTGCAATGTTTGGGGAGGCCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
||
| CDS-3UTR CCA 90 bp | AGTCGTTGTGTGGATAATATCACCTATAGAGCAATTCTACAAAAGGTAAACACATGGATGAGGTCCTTGTaGTCCGCCGCGATGCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SRCVDNITYRAILQKVNTWMRSL*SAAMLR Trigger: GCGCAGCATCGCGGCGGACCACAAGGACCTCATCCA...TGTGTTTACCTTTTGTAGAATTGCTCTATAGGTGATATTATCCACACAACGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
||
| CDS-3UTR CCA 90 bp | ACGCTCTCCTATGAAGCTACCTATCAACAGACAAACCTGAACTCTATGGTAACATGCTGCAGAGACCACTaGCTGAGGTTCATCACATCG | + |
|
Preference number: 4 (lower is better) Translates to: TLSYEATYQQTNLNSMVTCCRDH*LRFITS Trigger: CGATGTGATGAACCTCAGCCAGTGGTCTCTGCAGCA...TGTTACCATAGAGTTCAGGTTTGTCTGTTGATAGGTAGCTTCATAGGAGAGCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
||
| CDS-3UTR CCA 90 bp | ACGCTCTCCTATGAAGCTACCTATCAACAGACAAACCTGAACTCTATGGTAACAGATGAGCACGAGAGCTaGAAGGGTTCCAGGAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: TLSYEATYQQTNLNSMVTDEHES*KGSRKC Trigger: GCATTTCCTGGAACCCTTCCAGCTCTCGTGCTCATC...TGTTACCATAGAGTTCAGGTTTGTCTGTTGATAGGTAGCTTCATAGGAGAGCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
||
| CDS-3UTR GCA 90 bp | ACGCTCTCCTATGAAGCTACCTATCAACAGACAAACCTGAACTCTATGGTAACAAAGGGTTCCAGGAAATaGAGCTGCAGCACAGCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: TLSYEATYQQTNLNSMVTKGSRK*SCSTAY Trigger: GTAAGCTGTGCTGCAGCTGCATTTCCTGGAACCCTT...TGTTACCATAGAGTTCAGGTTTGTCTGTTGATAGGTAGCTTCATAGGAGAGCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
||
| CDS-3UTR CCA 90 bp | CTCCCCAAACATTGCACACATTATGGAGCAGAGATATACAAGCAGGTAAAACACTCGAAAGACACATCGTaGATGAGGTCCTTGTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPKHCTHYGAEIYKQVKHSKDTS*MRSLWS Trigger: GGACCACAAGGACCTCATCCACGATGTGTCTTTCGA...GTGTTTTACCTGCTTGTATATCTCTGCTCCATAATGTGTGCAATGTTTGGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
||
| CDS-3UTR CCA 90 bp | CTTTGGCCTCCCCAAACATTGCACACATTATGGAGCAGAGATATACAAGCAGGTAGAACTCCCATTTACTaGGCTCCCGTTACCTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LWPPQTLHTLWSRDIQAGRTPIY*APVTFQ Trigger: TTGAAAGGTAACGGGAGCCCAGTAAATGGGAGTTCT...ACCTGCTTGTATATCTCTGCTCCATAATGTGTGCAATGTTTGGGGAGGCCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
||
| CDS-3UTR TCA 90 bp | GTTTTGGTGATGATGTGTCAACAAAAAGCCTTTCCATTTATAGTGTCAGGAGGCGTCCTCTTCACCCAGTaGCTCTGTCCTCGAAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: VLVMMCQQKAFPFIVSGGVLFTQ*LCPRSL Trigger: TAAACTTCGAGGACAGAGTCACTGGGTGAAGAGGAC...GCCTCCTGACACTATAAATGGAAAGGCTTTTTGTTGACACATCATCACCAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
||
| CDS-3UTR GCA 90 bp | ATCCGTAACTCCACTTCCAAAACACTTGACTCTTTGGCCTCCCCAAACATTGCATCTTACATCTTTGGTTaGTACTGCCAGGATGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: IRNSTSKTLDSLASPNIASYIFG*YCQDVE Trigger: TTCCACATCCTGGCAGTAGCAACCAAAGATGTAAGA...TGCAATGTTTGGGGAGGCCAAAGAGTCAAGTGTTTTGGAAGTGGAGTTACGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
||
| CDS-3UTR CCA 90 bp | AGAGTGAAGTTCACAATGATACGCTCTCCTATGAAGCTACCTATCAACAGACAATCGAAAGACACATCGTaGATGAGGTCCTTGTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RVKFTMIRSPMKLPINRQSKDTS*MRSLWS Trigger: GGACCACAAGGACCTCATCCACGATGTGTCTTTCGA...TTGTCTGTTGATAGGTAGCTTCATAGGAGAGCGTATCATTGTGAACTTCACTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
||
| CDS-3UTR CCA 90 bp | CGTAACTCCACTTCCAAAACACTTGACTCTTTGGCCTCCCCAAACATTGCACACTCAGACCCATATGTTTaGGAGCAAATTTCACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: RNSTSKTLDSLASPNIAHSDPYV*EQISHQ Trigger: CTGATGTGAAATTTGCTCCCAAACATATGGGTCTGA...GTGTGCAATGTTTGGGGAGGCCAAAGAGTCAAGTGTTTTGGAAGTGGAGTTACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
||
| CDS-3UTR CCA 90 bp | AGTCGTTGTGTGGATAATATCACCTATAGAGCAATTCTACAAAAGGTAAACACATTCCCACAGCGATCATaGGGGGATGAGCACGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRCVDNITYRAILQKVNTFPQRS*GDEHES Trigger: GCTCTCGTGCTCATCCCCCCATGATCGCTGTGGGAA...TGTGTTTACCTTTTGTAGAATTGCTCTATAGGTGATATTATCCACACAACGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
||
| 3UTR CAA 72 bp | CTTCCAAAACACTTGACTCTTTGGCCTCCCCAAACATaGCACACATTATGGAGCAGAGATATACAAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LPKHLTLWPPQT*HTLWSRDIQAG Trigger: ACCTGCTTGTATATCTCTGCTCCATAATGTGTGCAATGTTTGGGGAGGCCAAAGAGTCAAGTGTTTTGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
||
| CDS-3UTR TCA 90 bp | AGAGTGAAGTTCACAATGATACGCTCTCCTATGAAGCTACCTATCAACAGACAATACTATACCATCTGCTaGACAGGTGGCCAACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: RVKFTMIRSPMKLPINRQYYTIC*TGGQHQ Trigger: CTGATGTTGGCCACCTGTTCAGCAGATGGTATAGTA...TTGTCTGTTGATAGGTAGCTTCATAGGAGAGCGTATCATTGTGAACTTCACTCT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
||
| CDS-3UTR GCA 90 bp | ATCACCTGTAAAGTCGTTGTGTGGATAATATCACCTATAGAGCAATTCTACAAACAGCTAGCTGTACAATaGCAGTCTCCGCTCTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ITCKVVVWIISPIEQFYKQLAVQ*QSPLSL Trigger: GAGCGAGAGCGGAGACTGGCATTGTACAGCTAGCTG...TTTGTAGAATTGCTCTATAGGTGATATTATCCACACAACGACTTTACAGGTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
||
| CDS-3UTR GCA 90 bp | CCCCAAACATTGCACACATTATGGAGCAGAGATATACAAGCAGGTAAAACACCCTTCTTCCCATACAGCTaGTGTTCGGTCAAAAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: PQTLHTLWSRDIQAGKTPFFPYS*CSVKRT Trigger: TGTTCTTTTGACCGAACAGCAGCTGTATGGGAAGAA...GGGTGTTTTACCTGCTTGTATATCTCTGCTCCATAATGTGTGCAATGTTTGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
||
| CDS-3UTR GCA 90 bp | AGTCGTTGTGTGGATAATATCACCTATAGAGCAATTCTACAAAAGGTAAACACATTACACGAGACCTCGTaGTGCAGAGACCACTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRCVDNITYRAILQKVNTLHETS*CRDHWL Trigger: CAGCCAGTGGTCTCTGCAGCACGAGGTCTCGTGTAA...TGTGTTTACCTTTTGTAGAATTGCTCTATAGGTGATATTATCCACACAACGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
||
| CDS-3UTR GCA 90 bp | AAACATTGCACACATTATGGAGCAGAGATATACAAGCAGGTAAAACACCCTACATCCAGGAAATGCAGCTaGAGCACAGCTTACACGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KHCTHYGAEIYKQVKHPTSRKCS*STAYTR Trigger: TCTCGTGTAAGCTGTGCTGCAGCTGCATTTCCTGGA...TGTAGGGTGTTTTACCTGCTTGTATATCTCTGCTCCATAATGTGTGCAATGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
||
| CDS-3UTR CCA 90 bp | ATCCGTAACTCCACTTCCAAAACACTTGACTCTTTGGCCTCCCCAAACATTGCACAAAAATCTGAACCTTaGCCATTGAATTTGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: IRNSTSKTLDSLASPNIAQKSEP*PLNLDC Trigger: GCAGTCCAAATTCAATGGCCAAGGTTCAGATTTTTG...TGCAATGTTTGGGGAGGCCAAAGAGTCAAGTGTTTTGGAAGTGGAGTTACGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
||
| CDS-3UTR CCA 90 bp | ATCCGTAACTCCACTTCCAAAACACTTGACTCTTTGGCCTCCCCAAACATTGCAAGATCTTCCCAAATTTaGAGCAAACGCGATATCATG | + |
|
Preference number: 4 (lower is better) Translates to: IRNSTSKTLDSLASPNIARSSQI*SKRDIM Trigger: CATGATATCGCGTTTGCTCCAAATTTGGGAAGATCT...TGCAATGTTTGGGGAGGCCAAAGAGTCAAGTGTTTTGGAAGTGGAGTTACGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
||
| CDS-3UTR GCA 90 bp | ACGCTCTCCTATGAAGCTACCTATCAACAGACAAACCTGAACTCTATGGTAACATTCTTCCCATACAGCTaGTGTTCGGTCAAAAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: TLSYEATYQQTNLNSMVTFFPYS*CSVKRT Trigger: TGTTCTTTTGACCGAACAGCAGCTGTATGGGAAGAA...TGTTACCATAGAGTTCAGGTTTGTCTGTTGATAGGTAGCTTCATAGGAGAGCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
||
| CDS-3UTR GCA 90 bp | CTCCCCAAACATTGCACACATTATGGAGCAGAGATATACAAGCAGGTAAAACACATCTTTGGTTGCTACTaGCAGGATGTGGAAAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LPKHCTHYGAEIYKQVKHIFGCY*QDVERS Trigger: AGATCTTTCCACATCCTGGCAGTAGCAACCAAAGAT...GTGTTTTACCTGCTTGTATATCTCTGCTCCATAATGTGTGCAATGTTTGGGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
||
| CDS-3UTR GCA 90 bp | ACGCTCTCCTATGAAGCTACCTATCAACAGACAAACCTGAACTCTATGGTAACATCTTACATCTTTGGTTaGTACTGCCAGGATGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLSYEATYQQTNLNSMVTSYIFG*YCQDVE Trigger: TTCCACATCCTGGCAGTAGCAACCAAAGATGTAAGA...TGTTACCATAGAGTTCAGGTTTGTCTGTTGATAGGTAGCTTCATAGGAGAGCGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
||
| CDS-3UTR CCA 90 bp | ACGCTCTCCTATGAAGCTACCTATCAACAGACAAACCTGAACTCTATGGTAACACAAAAATCTGAACCTTaGCCATTGAATTTGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLSYEATYQQTNLNSMVTQKSEP*PLNLDC Trigger: GCAGTCCAAATTCAATGGCCAAGGTTCAGATTTTTG...TGTTACCATAGAGTTCAGGTTTGTCTGTTGATAGGTAGCTTCATAGGAGAGCGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
||
| CDS-3UTR CCA 90 bp | CCCCAAACATTGCACACATTATGGAGCAGAGATATACAAGCAGGTAAAACACCCAAATTCTTACATCTTTaGTTGCTACTGCCAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: PQTLHTLWSRDIQAGKTPKFLHL*LLLPGC Trigger: ACATCCTGGCAGTAGCAACCAAAGATGTAAGAATTT...GGGTGTTTTACCTGCTTGTATATCTCTGCTCCATAATGTGTGCAATGTTTGGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
||
| CDS-3UTR TCA 90 bp | ATCACCTGTAAAGTCGTTGTGTGGATAATATCACCTATAGAGCAATTCTACAAATTTGAGTTTCCCAGCTaGGAACTCCCATTTACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ITCKVVVWIISPIEQFYKFEFPS*ELPFTG Trigger: CCCAGTAAATGGGAGTTCTCAGCTGGGAAACTCAAA...TTTGTAGAATTGCTCTATAGGTGATATTATCCACACAACGACTTTACAGGTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
||
| CDS-3UTR CCA 90 bp | AGAGTGAAGTTCACAATGATACGCTCTCCTATGAAGCTACCTATCAACAGACAATCAGACCCATATGTTTaGGAGCAAATTTCACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: RVKFTMIRSPMKLPINRQSDPYV*EQISHQ Trigger: CTGATGTGAAATTTGCTCCCAAACATATGGGTCTGA...TTGTCTGTTGATAGGTAGCTTCATAGGAGAGCGTATCATTGTGAACTTCACTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
||
| CDS-3UTR CCA 90 bp | ACGCTCTCCTATGAAGCTACCTATCAACAGACAAACCTGAACTCTATGGTAACAAAATTCTTACATCTTTaGTTGCTACTGCCAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: TLSYEATYQQTNLNSMVTKFLHL*LLLPGC Trigger: ACATCCTGGCAGTAGCAACCAAAGATGTAAGAATTT...TGTTACCATAGAGTTCAGGTTTGTCTGTTGATAGGTAGCTTCATAGGAGAGCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
||
| CDS-3UTR TCA 90 bp | AGAGTGAAGTTCACAATGATACGCTCTCCTATGAAGCTACCTATCAACAGACAATCGAAGTTTATCGTTTaGTTCTCCCACTATTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RVKFTMIRSPMKLPINRQSKFIV*FSHYFF Trigger: GAAGAAATAGTGGGAGAATCAAACGATAAACTTCGA...TTGTCTGTTGATAGGTAGCTTCATAGGAGAGCGTATCATTGTGAACTTCACTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
||
| CDS-3UTR CCA 90 bp | GTTTTGGTGATGATGTGTCAACAAAAAGCCTTTCCATTTATAGTGTCAGGAGGCGATTTCAAATTTTGTTaGACCACCAGAGGAAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: VLVMMCQQKAFPFIVSGGDFKFC*TTRGSK Trigger: CTTACTTCCTCTGGTGGTCCAACAAAATTTGAAATC...GCCTCCTGACACTATAAATGGAAAGGCTTTTTGTTGACACATCATCACCAAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
||
| CDS-3UTR CCA 90 bp | ATCACCTGTAAAGTCGTTGTGTGGATAATATCACCTATAGAGCAATTCTACAAAAGAACTCCCATTTACTaGGCTCCCGTTACCTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ITCKVVVWIISPIEQFYKRTPIY*APVTFQ Trigger: TTGAAAGGTAACGGGAGCCCAGTAAATGGGAGTTCT...TTTGTAGAATTGCTCTATAGGTGATATTATCCACACAACGACTTTACAGGTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
||
| CDS-3UTR CCA 90 bp | ATCACCTGTAAAGTCGTTGTGTGGATAATATCACCTATAGAGCAATTCTACAAAGCTACTGCCAGGATGTaGAAAGATCTTCCCAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: ITCKVVVWIISPIEQFYKATARM*KDLPKF Trigger: AAATTTGGGAAGATCTTTCCACATCCTGGCAGTAGC...TTTGTAGAATTGCTCTATAGGTGATATTATCCACACAACGACTTTACAGGTGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
||
| CDS-3UTR CCA 90 bp | AGTCGTTGTGTGGATAATATCACCTATAGAGCAATTCTACAAAAGGTAAACACAAGATCTTCCCAAATTTaGAGCAAACGCGATATCATG | + |
|
Preference number: 4 (lower is better) Translates to: SRCVDNITYRAILQKVNTRSSQI*SKRDIM Trigger: CATGATATCGCGTTTGCTCCAAATTTGGGAAGATCT...TGTGTTTACCTTTTGTAGAATTGCTCTATAGGTGATATTATCCACACAACGACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
||
| 3UTR CAA 72 bp | TTTGAATCAGATACTGGGAATCTTTCACAGTTAATATaGCTTTTTCTGAAGCTCCTCTCATCAAAGGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: FESDTGNLSQLI*LFLKLLSSKVT Trigger: GGTTACCTTTGATGAGAGGAGCTTCAGAAAAAGCAATATTAACTGTGAAAGATTCCCAGTATCTGATTCAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
||
| CDS CCA 90 bp | GAGCAGGTGGCCATCCGGCGCCCGTGGAAGTCGAAAGACACATCGTaGATGAGGTCCTTGTGGTCCGCCGCGATGCTGCGCGCCACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: EQVAIRRPWKSKDTS*MRSLWSAAMLRATN Trigger: GTTTGTGGCGCGCAGCATCGCGGCGGACCACAAGGACCTCATCCACGATGTGTCTTTCGACTTCCACGGGCGCCGGATGGCCACCTGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025421.9 ENSMUST00000237700.2 |
||
| CDS TCA 90 bp | CAATGCCAGTCTCCGCTCTCGCTCTTATCCCACACCTTGACGCTCTaGTCGCTGGAGCAGGTGGCCATCCGGCGCCCGTGGAAGTCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QCQSPLSLLSHTLTL*SLEQVAIRRPWKSK Trigger: TTTCGACTTCCACGGGCGCCGGATGGCCACCTGCTCCAGCGATCAGAGCGTCAAGGTGTGGGATAAGAGCGAGAGCGGAGACTGGCATTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025421.9 ENSMUST00000237700.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTGGCTCAGCAATTAAGGGCCCTGGCTGCTCTTGCAAAGGACCCAGGTTTGTCGTGGATGAGGTCCTaGTGGTCCGCCGCGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EVAQQLRALAALAKDPGLSWMRS*WSAAML Trigger: CAGCATCGCGGCGGACCACAAGGACCTCATCCACGA...CAAACCTGGGTCCTTTGCAAGAGCAGCCAGGGCCCTTAATTGCTGAGCCACCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
||
| CDS GCA 90 bp | GGGTTCCAGGAAATGCAGCTGCAGCACAGCTTACACGAGACCTCGTaGTGCAGAGACCACTGGCTGAGGTTCATCACATCGGGAGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GFQEMQLQHSLHETS*CRDHWLRFITSGAS Trigger: CGAGGCTCCCGATGTGATGAACCTCAGCCAGTGGTCTCTGCAGCACGAGGTCTCGTGTAAGCTGTGCTGCAGCTGCATTTCCTGGAACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025421.9 ENSMUST00000237700.2 |
||
| CDS-3UTR CAA 90 bp | TTACATTGCTTTCCACTGTCAGCAGTCCTGCATGTGCTGCAGCGGCAGGCACACTCGTGGATGAGGTCCTaGTGGTCCGCCGCGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LHCFPLSAVLHVLQRQAHSWMRS*WSAAML Trigger: CAGCATCGCGGCGGACCACAAGGACCTCATCCACGA...GTGTGCCTGCCGCTGCAGCACATGCAGGACTGCTGACAGTGGAAAGCAATGTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
||
| CDS TCA 90 bp | TGCAGCACAGCTTACACGAGACCTCGTGCTGCAGAGACCACTGGCTaGGGTTCATCACATCGGGAGCCTCGTAGACCCTTACTATACCAT | + |
|
Preference number: 5 (lower is better) Translates to: CSTAYTRPRAAETTG*GSSHREPRRPLLYH Trigger: ATGGTATAGTAAGGGTCTACGAGGCTCCCGATGTGATGAACCTCAGCCAGTGGTCTCTGCAGCACGAGGTCTCGTGTAAGCTGTGCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025421.9 ENSMUST00000237700.2 |
||
| CDS CCA 90 bp | TGGCCATTGAATTTGGACTGCTATCATCACTTCCCACAGCGATCATaGGGGGATGAGCACGAGAGCTGGAAGGGTTCCAGGAAATGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WPLNLDCYHHFPQRS*GDEHESWKGSRKCS Trigger: GCTGCATTTCCTGGAACCCTTCCAGCTCTCGTGCTCATCCCCCCATGATCGCTGTGGGAAGTGATGATAGCAGTCCAAATTCAATGGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025421.9 ENSMUST00000237700.2 |
||
| CDS-3UTR CAA 90 bp | AGGAGAGGTGGCTCAGCAATTAAGGGCCCTGGCTGCTCTTGCAAAGGACCCAGGACAGGAAGCCAAAACTaGTCCAAATTCAGGATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RRGGSAIKGPGCSCKGPRTGSQN*SKFRMS Trigger: GCTCATCCTGAATTTGGACAAGTTTTGGCTTCCTGT...CCTGGGTCCTTTGCAAGAGCAGCCAGGGCCCTTAATTGCTGAGCCACCTCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
||
| CDS CCA 90 bp | CATCGGGAGCCTCGTAGACCCTTACTATACCATCTGCTGAACAGGTaGCCAACATCAGACCCATATGTTTGGGAGCAAATTTCACATCAG | + |
|
Preference number: 5 (lower is better) Translates to: HREPRRPLLYHLLNR*PTSDPYVWEQISHQ Trigger: CTGATGTGAAATTTGCTCCCAAACATATGGGTCTGATGTTGGCCACCTGTTCAGCAGATGGTATAGTAAGGGTCTACGAGGCTCCCGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025421.9 ENSMUST00000237700.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTGGCTCAGCAATTAAGGGCCCTGGCTGCTCTTGCAAAGGACCCAGGTTTGGAAGATTTGGAATATTaGAGCTCAGTGAAGGATTTG | + |
|
Preference number: 5 (lower is better) Translates to: EVAQQLRALAALAKDPGLEDLEY*SSVKDL Trigger: CAAATCCTTCACTGAGCTCAAATATTCCAAATCTTC...CAAACCTGGGTCCTTTGCAAGAGCAGCCAGGGCCCTTAATTGCTGAGCCACCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
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| CDS TCA 90 bp | GTTCATCACATCGGGAGCCTCGTAGACCCTTACTATACCATCTGCTaGACAGGTGGCCAACATCAGACCCATATGTTTGGGAGCAAATTT | + |
|
Preference number: 5 (lower is better) Translates to: VHHIGSLVDPYYTIC*TGGQHQTHMFGSKF Trigger: AAATTTGCTCCCAAACATATGGGTCTGATGTTGGCCACCTGTTCAGCAGATGGTATAGTAAGGGTCTACGAGGCTCCCGATGTGATGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025421.9 ENSMUST00000237700.2 |
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| CDS CCA 90 bp | ATCTTTGGTTGCTACTGCCAGGATGTGGAAAGATCTTCCCAAATTTaGAGCAAACGCGATATCATGGACGGGGTCTGTGACTGTCATAAG | + |
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Preference number: 5 (lower is better) Translates to: IFGCYCQDVERSSQI*SKRDIMDGVCDCHK Trigger: CTTATGACAGTCACAGACCCCGTCCATGATATCGCGTTTGCTCCAAATTTGGGAAGATCTTTCCACATCCTGGCAGTAGCAACCAAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025421.9 ENSMUST00000237700.2 |
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| CDS TCA 90 bp | AGTTGTCCTCTTCACCCAGTGACTCTGTCCTCGAAGTTTATCGTTTaGTTCTCCCACTATTTCTTCCCATACAGCTGCTGTTCGGTCAAA | + |
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Preference number: 5 (lower is better) Translates to: SCPLHPVTLSSKFIV*FSHYFFPYSCCSVK Trigger: TTTGACCGAACAGCAGCTGTATGGGAAGAAATAGTGGGAGAATCAAACGATAAACTTCGAGGACAGAGTCACTGGGTGAAGAGGACAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025421.9 ENSMUST00000237700.2 |
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| CDS CCA 90 bp | AGGATGTGGAAAGATCTTCCCAAATTTGGAGCAAACGCGATATCATaGACGGGGTCTGTGACTGTCATAAGAGTCTCAGCTTTCGCATAT | + |
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Preference number: 5 (lower is better) Translates to: RMWKDLPKFGANAIS*TGSVTVIRVSAFAY Trigger: ATATGCGAAAGCTGAGACTCTTATGACAGTCACAGACCCCGTCCATGATATCGCGTTTGCTCCAAATTTGGGAAGATCTTTCCACATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025421.9 ENSMUST00000237700.2 |
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| CDS-3UTR CAA 90 bp | ATCCGTAACTCCACTTCCAAAACACTTGACTCTTTGGCCTCCCCAAACATTGCACCTTGGCCATTGAATTaGGACTGCTATCATCACTTC | + |
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Preference number: 5 (lower is better) Translates to: IRNSTSKTLDSLASPNIAPWPLN*DCYHHF Trigger: GAAGTGATGATAGCAGTCCAAATTCAATGGCCAAGG...TGCAATGTTTGGGGAGGCCAAAGAGTCAAGTGTTTTGGAAGTGGAGTTACGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
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| CDS-3UTR CAA 90 bp | ATCCGTAACTCCACTTCCAAAACACTTGACTCTTTGGCCTCCCCAAACATTGCATTCTTACATCTTTGGTaGCTACTGCCAGGATGTGGA | + |
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Preference number: 5 (lower is better) Translates to: IRNSTSKTLDSLASPNIAFLHLW*LLPGCG Trigger: TCCACATCCTGGCAGTAGCAACCAAAGATGTAAGAA...TGCAATGTTTGGGGAGGCCAAAGAGTCAAGTGTTTTGGAAGTGGAGTTACGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
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| CDS-3UTR CAA 90 bp | CACCCTACACATAAAAAGTGTGCATGGGGGCAGGGAAGGAGGTTTCTAGTTTTTTCTGAACCTTGGCCATaGAATTTGGACTGCTATCAT | + |
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Preference number: 5 (lower is better) Translates to: HPTHKKCAWGQGRRFLVFSEPWP*NLDCYH Trigger: ATGATAGCAGTCCAAATTCAATGGCCAAGGTTCAGA...AAAAACTAGAAACCTCCTTCCCTGCCCCCATGCACACTTTTTATGTGTAGGGTG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
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| CDS TCA 90 bp | AGATTTGGAATATTTGAGCTCAGTGAAGGATTTGAGTTTCCCAGCTaGGAACTCCCATTTACTGGGCTCCCGTTACCTTTCAAAATACCA | + |
|
Preference number: 5 (lower is better) Translates to: RFGIFELSEGFEFPS*ELPFTGLPLPFKIP Trigger: TGGTATTTTGAAAGGTAACGGGAGCCCAGTAAATGGGAGTTCTCAGCTGGGAAACTCAAATCCTTCACTGAGCTCAAATATTCCAAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025421.9 ENSMUST00000237700.2 |
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| CDS-3UTR CAA 90 bp | AGAGTGAAGTTCACAATGATACGCTCTCCTATGAAGCTACCTATCAACAGACAACCTTGGCCATTGAATTaGGACTGCTATCATCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: RVKFTMIRSPMKLPINRQPWPLN*DCYHHF Trigger: GAAGTGATGATAGCAGTCCAAATTCAATGGCCAAGG...TTGTCTGTTGATAGGTAGCTTCATAGGAGAGCGTATCATTGTGAACTTCACTCT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| CDS-3UTR CAA 90 bp | GTTTTGGTGATGATGTGTCAACAAAAAGCCTTTCCATTTATAGTGTCAGGAGGCTTCTTACATCTTTGGTaGCTACTGCCAGGATGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VLVMMCQQKAFPFIVSGGFLHLW*LLPGCG Trigger: TCCACATCCTGGCAGTAGCAACCAAAGATGTAAGAA...GCCTCCTGACACTATAAATGGAAAGGCTTTTTGTTGACACATCATCACCAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| CDS-3UTR CAA 90 bp | CCCCAAACATTGCACACATTATGGAGCAGAGATATACAAGCAGGTAAAACACCCTATGGATTTCAAATTTaGTTGGACCACCAGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PQTLHTLWSRDIQAGKTPYGFQI*LDHQRK Trigger: CTTCCTCTGGTGGTCCAACAAAATTTGAAATCCATA...GGGTGTTTTACCTGCTTGTATATCTCTGCTCCATAATGTGTGCAATGTTTGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
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| CDS-3UTR CAA 90 bp | ACGCTCTCCTATGAAGCTACCTATCAACAGACAAACCTGAACTCTATGGTAACAAAGATCTTCCCAAATTaGGAGCAAACGCGATATCAT | + |
|
Preference number: 5 (lower is better) Translates to: TLSYEATYQQTNLNSMVTKIFPN*EQTRYH Trigger: ATGATATCGCGTTTGCTCCAAATTTGGGAAGATCTT...TGTTACCATAGAGTTCAGGTTTGTCTGTTGATAGGTAGCTTCATAGGAGAGCGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| CDS-3UTR CAA 90 bp | CTCCCCAAACATTGCACACATTATGGAGCAGAGATATACAAGCAGGTAAAACACAAGATCTTCCCAAATTaGGAGCAAACGCGATATCAT | + |
|
Preference number: 5 (lower is better) Translates to: LPKHCTHYGAEIYKQVKHKIFPN*EQTRYH Trigger: ATGATATCGCGTTTGCTCCAAATTTGGGAAGATCTT...GTGTTTTACCTGCTTGTATATCTCTGCTCCATAATGTGTGCAATGTTTGGGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237700.2 |
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| CDS CCA 90 bp | TTTAATGTGAAAATTCTTACATCTTTGGTTGCTACTGCCAGGATGTaGAAAGATCTTCCCAAATTTGGAGCAAACGCGATATCATGGACG | + |
|
Preference number: 5 (lower is better) Translates to: FNVKILTSLVATARM*KDLPKFGANAISWT Trigger: CGTCCATGATATCGCGTTTGCTCCAAATTTGGGAAGATCTTTCCACATCCTGGCAGTAGCAACCAAAGATGTAAGAATTTTCACATTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025421.9 ENSMUST00000237700.2 |
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| CDS-3UTR CAA 90 bp | GTTTTGGTGATGATGTGTCAACAAAAAGCCTTTCCATTTATAGTGTCAGGAGGCTATGGATTTCAAATTTaGTTGGACCACCAGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VLVMMCQQKAFPFIVSGGYGFQI*LDHQRK Trigger: CTTCCTCTGGTGGTCCAACAAAATTTGAAATCCATA...GCCTCCTGACACTATAAATGGAAAGGCTTTTTGTTGACACATCATCACCAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| CDS CCA 90 bp | TCGCATATTTCCTGGTATTTTCATTGTATTCAAAAATCTGAACCTTaGCCATTGAATTTGGACTGCTATCATCACTTCCCACAGCGATCA | + |
|
Preference number: 5 (lower is better) Translates to: SHISWYFHCIQKSEP*PLNLDCYHHFPQRS Trigger: TGATCGCTGTGGGAAGTGATGATAGCAGTCCAAATTCAATGGCCAAGGTTCAGATTTTTGAATACAATGAAAATACCAGGAAATATGCGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025421.9 ENSMUST00000237700.2 |
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| CDS-3UTR CAA 90 bp | ATCACCTGTAAAGTCGTTGTGTGGATAATATCACCTATAGAGCAATTCTACAAAACAGGAAGCCAAAACTaGTCCAAATTCAGGATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ITCKVVVWIISPIEQFYKTGSQN*SKFRMS Trigger: GCTCATCCTGAATTTGGACAAGTTTTGGCTTCCTGT...TTTGTAGAATTGCTCTATAGGTGATATTATCCACACAACGACTTTACAGGTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| CDS-3UTR CAA 90 bp | ATCACCTGTAAAGTCGTTGTGTGGATAATATCACCTATAGAGCAATTCTACAAATCTGAACCTTGGCCATaGAATTTGGACTGCTATCAT | + |
|
Preference number: 5 (lower is better) Translates to: ITCKVVVWIISPIEQFYKSEPWP*NLDCYH Trigger: ATGATAGCAGTCCAAATTCAATGGCCAAGGTTCAGA...TTTGTAGAATTGCTCTATAGGTGATATTATCCACACAACGACTTTACAGGTGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| CDS-3UTR CAA 90 bp | AGTCGTTGTGTGGATAATATCACCTATAGAGCAATTCTACAAAAGGTAAACACACTCGAAGTTTATCGTTaGATTCTCCCACTATTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SRCVDNITYRAILQKVNTLEVYR*ILPLFL Trigger: AAGAAATAGTGGGAGAATCAAACGATAAACTTCGAG...TGTGTTTACCTTTTGTAGAATTGCTCTATAGGTGATATTATCCACACAACGACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| CDS-3UTR CAA 90 bp | AGTCGTTGTGTGGATAATATCACCTATAGAGCAATTCTACAAAAGGTAAACACAGAAGATTTGGAATATTaGAGCTCAGTGAAGGATTTG | + |
|
Preference number: 5 (lower is better) Translates to: SRCVDNITYRAILQKVNTEDLEY*SSVKDL Trigger: CAAATCCTTCACTGAGCTCAAATATTCCAAATCTTC...TGTGTTTACCTTTTGTAGAATTGCTCTATAGGTGATATTATCCACACAACGACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025421.9 |
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| CDS TCA 72 bp | TCCGGCGCCCGTGGAAGTCGAAAGACACATCGTGGATaGGGTCCTTGTGGTCCGCCGCGATGCTGCGCGCCA | + |
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Preference number: 6 (lower is better) Translates to: SGARGSRKTHRG*GPCGPPRCCAP Trigger: TGGCGCGCAGCATCGCGGCGGACCACAAGGACCTCATCCACGATGTGTCTTTCGACTTCCACGGGCGCCGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025421.9 ENSMUST00000237700.2 |
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| CDS CCA 72 bp | GCCATCCGGCGCCCGTGGAAGTCGAAAGACACATCGTaGATGAGGTCCTTGTGGTCCGCCGCGATGCTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: AIRRPWKSKDTS*MRSLWSAAMLR Trigger: GCGCAGCATCGCGGCGGACCACAAGGACCTCATCCACGATGTGTCTTTCGACTTCCACGGGCGCCGGATGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025421.9 ENSMUST00000237700.2 |
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| CDS GCA 72 bp | GAAATGCAGCTGCAGCACAGCTTACACGAGACCTCGTaGTGCAGAGACCACTGGCTGAGGTTCATCACATCG | + |
|
Preference number: 6 (lower is better) Translates to: EMQLQHSLHETS*CRDHWLRFITS Trigger: CGATGTGATGAACCTCAGCCAGTGGTCTCTGCAGCACGAGGTCTCGTGTAAGCTGTGCTGCAGCTGCATTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025421.9 ENSMUST00000237700.2 |
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| CDS CCA 72 bp | AATTTGGACTGCTATCATCACTTCCCACAGCGATCATaGGGGGATGAGCACGAGAGCTGGAAGGGTTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: NLDCYHHFPQRS*GDEHESWKGSR Trigger: CCTGGAACCCTTCCAGCTCTCGTGCTCATCCCCCCATGATCGCTGTGGGAAGTGATGATAGCAGTCCAAATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025421.9 ENSMUST00000237700.2 |
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| CDS CCA 72 bp | TGCTACTGCCAGGATGTGGAAAGATCTTCCCAAATTTaGAGCAAACGCGATATCATGGACGGGGTCTGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: CYCQDVERSSQI*SKRDIMDGVCD Trigger: GTCACAGACCCCGTCCATGATATCGCGTTTGCTCCAAATTTGGGAAGATCTTTCCACATCCTGGCAGTAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025421.9 ENSMUST00000237700.2 |
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| CDS CAA 90 bp | GAGTTGTCCTCTTCACCCAGTGACTCTGTCCTCGAAGTTTATCGTTaGATTCTCCCACTATTTCTTCCCATACAGCTGCTGTTCGGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: ELSSSPSDSVLEVYR*ILPLFLPIQLLFGQ Trigger: TTGACCGAACAGCAGCTGTATGGGAAGAAATAGTGGGAGAATCAAACGATAAACTTCGAGGACAGAGTCACTGGGTGAAGAGGACAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025421.9 ENSMUST00000237700.2 |
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| CDS CCA 72 bp | CCTCGTAGACCCTTACTATACCATCTGCTGAACAGGTaGCCAACATCAGACCCATATGTTTGGGAGCAAATT | + |
|
Preference number: 6 (lower is better) Translates to: PRRPLLYHLLNR*PTSDPYVWEQI Trigger: AATTTGCTCCCAAACATATGGGTCTGATGTTGGCCACCTGTTCAGCAGATGGTATAGTAAGGGTCTACGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025421.9 ENSMUST00000237700.2 |
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| CDS CAA 90 bp | ACTATACCATCTGCTGAACAGGTGGCCAACATCAGACCCATATGTTaGGGAGCAAATTTCACATCAGTAACAGAGGTTCTGCTGTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: TIPSAEQVANIRPIC*GANFTSVTEVLLST Trigger: AGTGGACAGCAGAACCTCTGTTACTGATGTGAAATTTGCTCCCAAACATATGGGTCTGATGTTGGCCACCTGTTCAGCAGATGGTATAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025421.9 ENSMUST00000237700.2 |
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| CDS TCA 72 bp | CTTCACCCAGTGACTCTGTCCTCGAAGTTTATCGTTTaGTTCTCCCACTATTTCTTCCCATACAGCTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LHPVTLSSKFIV*FSHYFFPYSCC Trigger: ACAGCAGCTGTATGGGAAGAAATAGTGGGAGAATCAAACGATAAACTTCGAGGACAGAGTCACTGGGTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025421.9 ENSMUST00000237700.2 |
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| CDS CCA 72 bp | AAAGATCTTCCCAAATTTGGAGCAAACGCGATATCATaGACGGGGTCTGTGACTGTCATAAGAGTCTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: KDLPKFGANAIS*TGSVTVIRVSA Trigger: AGCTGAGACTCTTATGACAGTCACAGACCCCGTCCATGATATCGCGTTTGCTCCAAATTTGGGAAGATCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025421.9 ENSMUST00000237700.2 |
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| CDS CAA 72 bp | TCTTCACCCAGTGACTCTGTCCTCGAAGTTTATCGTTaGATTCTCCCACTATTTCTTCCCATACAGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSPSDSVLEVYR*ILPLFLPIQLL Trigger: CAGCAGCTGTATGGGAAGAAATAGTGGGAGAATCAAACGATAAACTTCGAGGACAGAGTCACTGGGTGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025421.9 ENSMUST00000237700.2 |
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| CDS CAA 72 bp | TCTGCTGAACAGGTGGCCAACATCAGACCCATATGTTaGGGAGCAAATTTCACATCAGTAACAGAGGTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SAEQVANIRPIC*GANFTSVTEVL Trigger: CAGAACCTCTGTTACTGATGTGAAATTTGCTCCCAAACATATGGGTCTGATGTTGGCCACCTGTTCAGCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025421.9 ENSMUST00000237700.2 |
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| CDS CAA 72 bp | CATTGTATTCAAAAATCTGAACCTTGGCCATTGAATTaGGACTGCTATCATCACTTCCCACAGCGATCATGG | + |
|
Preference number: 6 (lower is better) Translates to: HCIQKSEPWPLN*DCYHHFPQRSW Trigger: CCATGATCGCTGTGGGAAGTGATGATAGCAGTCCAAATTCAATGGCCAAGGTTCAGATTTTTGAATACAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025421.9 ENSMUST00000237700.2 |
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| CDS CAA 90 bp | TTAATGAATTTTGAAGATTTGGAATATTTGAGCTCAGTGAAGGATTaGAGTTTCCCAGCTGAGAACTCCCATTTACTGGGCTCCCGTTAC | + |
|
Preference number: 6 (lower is better) Translates to: LMNFEDLEYLSSVKD*SFPAENSHLLGSRY Trigger: GTAACGGGAGCCCAGTAAATGGGAGTTCTCAGCTGGGAAACTCAAATCCTTCACTGAGCTCAAATATTCCAAATCTTCAAAATTCATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025421.9 ENSMUST00000237700.2 |
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| CDS CCA 72 bp | AAAATTCTTACATCTTTGGTTGCTACTGCCAGGATGTaGAAAGATCTTCCCAAATTTGGAGCAAACGCGATA | + |
|
Preference number: 6 (lower is better) Translates to: KILTSLVATARM*KDLPKFGANAI Trigger: TATCGCGTTTGCTCCAAATTTGGGAAGATCTTTCCACATCCTGGCAGTAGCAACCAAAGATGTAAGAATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025421.9 ENSMUST00000237700.2 |
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| CDS CCA 72 bp | ATCAAACTGAGCCACAATATGGATTTCAAATTTTGTTaGACCACCAGAGGAAGTAAGTTCTTTCCTCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: IKLSHNMDFKFC*TTRGSKFFPQR Trigger: CCTCTGAGGAAAGAACTTACTTCCTCTGGTGGTCCAACAAAATTTGAAATCCATATTGTGGCTCAGTTTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025421.9 ENSMUST00000237700.2 |
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| CDS CCA 72 bp | TCCTGGTATTTTCATTGTATTCAAAAATCTGAACCTTaGCCATTGAATTTGGACTGCTATCATCACTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SWYFHCIQKSEP*PLNLDCYHHFP Trigger: TGGGAAGTGATGATAGCAGTCCAAATTCAATGGCCAAGGTTCAGATTTTTGAATACAATGAAAATACCAGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025421.9 ENSMUST00000237700.2 |
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