Pregenerated sensors for SECTM1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025165Ensembl transcript IDs: ENSMUST00000026162.12, ENSMUST00000100126.9, ENSMUST00000106119.9, ENSMUST00000106120.3
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCACTCTGGACTCAACCCTGCAGGCAGCTCCCTTCAGCTTCCACTaGCCACAGACCTGGAACCACCTTACCTCAAGTCAGGCACTGAGG | + |
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Preference number: 1 (lower is better) Translates to: LTLDSTLQAAPFSFH*PQTWNHLTSSQALR Trigger: CCTCAGTGCCTGACTTGAGGTAAGGTGGTTCCAGGTCTGTGGCCAGTGGAAGCTGAAGGGAGCTGCCTGCAGGGTTGAGTCCAGAGTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026162.12 ENSMUST00000106119.9 ENSMUST00000106120.3 |
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| 3UTR GCA 90 bp | TTAGAACATAAGCCCATGCTGGTGGTCTCACTCTGGACTCAACCCTaGAGGCAGCTCCCTTCAGCTTCCACTGGCCACAGACCTGGAACC | + |
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Preference number: 1 (lower is better) Translates to: LEHKPMLVVSLWTQP*RQLPSASTGHRPGT Trigger: GGTTCCAGGTCTGTGGCCAGTGGAAGCTGAAGGGAGCTGCCTGCAGGGTTGAGTCCAGAGTGAGACCACCAGCATGGGCTTATGTTCTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026162.12 ENSMUST00000100126.9 ENSMUST00000106119.9 ENSMUST00000106120.3 |
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| 3UTR GCA 90 bp | GGGCTCAGGAGTCTGCTGAAGAGAAGCCCCCAGGGAATCCCAAGATaGTCTATGATCCTCAGGAGAGCAATGCCTGCCAACCAACACTAC | + |
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Preference number: 1 (lower is better) Translates to: GLRSLLKRSPQGIPR*SMILRRAMPANQHY Trigger: GTAGTGTTGGTTGGCAGGCATTGCTCTCCTGAGGATCATAGAGCATCTTGGGATTCCCTGGGGGCTTCTCTTCAGCAGACTCCTGAGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106119.9 |
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| 3UTR CCA 90 bp | TCAACCCTGCAGGCAGCTCCCTTCAGCTTCCACTGGCCACAGACCTaGAACCACCTTACCTCAAGTCAGGCACTGAGGTACATTCCATCT | + |
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Preference number: 1 (lower is better) Translates to: STLQAAPFSFHWPQT*NHLTSSQALRYIPS Trigger: AGATGGAATGTACCTCAGTGCCTGACTTGAGGTAAGGTGGTTCCAGGTCTGTGGCCAGTGGAAGCTGAAGGGAGCTGCCTGCAGGGTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026162.12 ENSMUST00000106119.9 ENSMUST00000106120.3 |
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| 3UTR GCA 90 bp | GGGAAAGGACTTTGTGCCCAGCAGACTGAACAAAGCCATGTGCTCTaGCAAGCGCGTAATGATGACTTCCATGGTGTCTGCAGTCCCAGA | + |
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Preference number: 1 (lower is better) Translates to: GKGLCAQQTEQSHVL*QARNDDFHGVCSPR Trigger: TCTGGGACTGCAGACACCATGGAAGTCATCATTACGCGCTTGGCAGAGCACATGGCTTTGTTCAGTCTGCTGGGCACAAAGTCCTTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026162.12 ENSMUST00000100126.9 ENSMUST00000106119.9 ENSMUST00000106120.3 |
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| 3UTR CCA 90 bp | GCCTATGCCGATCGTCAAGAGCTGTGCGGCTGGGAATTCCCAATTTaGGGAAGAGTTGAGGAATGGATCAGATGTCTGAAGACCATAGTC | + |
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Preference number: 1 (lower is better) Translates to: AYADRQELCGWEFPI*GRVEEWIRCLKTIV Trigger: GACTATGGTCTTCAGACATCTGATCCATTCCTCAACTCTTCCCCAAATTGGGAATTCCCAGCCGCACAGCTCTTGACGATCGGCATAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106119.9 |
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| 3UTR CCA 90 bp | GAGCTGTGCGGCTGGGAATTCCCAATTTGGGGAAGAGTTGAGGAATaGATCAGATGTCTGAAGACCATAGTCAGGAGGCTGTACTCTTGT | + |
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Preference number: 1 (lower is better) Translates to: ELCGWEFPIWGRVEE*IRCLKTIVRRLYSC Trigger: ACAAGAGTACAGCCTCCTGACTATGGTCTTCAGACATCTGATCCATTCCTCAACTCTTCCCCAAATTGGGAATTCCCAGCCGCACAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106119.9 |
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| 3UTR CCA 90 bp | TCTGAAAGTCTTAGCTCCCTATTTTGGCCCCTGGAACCTGACATCTaGGCTTCCCGAACTCGTTTCTGTTGTGAGTCAGAAATCAGGTAC | + |
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Preference number: 1 (lower is better) Translates to: SESLSSLFWPLEPDI*ASRTRFCCESEIRY Trigger: GTACCTGATTTCTGACTCACAACAGAAACGAGTTCGGGAAGCCCAGATGTCAGGTTCCAGGGGCCAAAATAGGGAGCTAAGACTTTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106119.9 |
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| 3UTR-3UTR CCA 90 bp | AGCCATGTGCTCTGCCAAGCGCGTAATGATGACTTCCATGGTGTCTGCAGTCCCCCCTTCAGCTTCCACTaGCCACAGACCTGGAACCAC | + |
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Preference number: 2 (lower is better) Translates to: SHVLCQARNDDFHGVCSPPFSFH*PQTWNH Trigger: GTGGTTCCAGGTCTGTGGCCAGTGGAAGCTGAAGGG...GGGACTGCAGACACCATGGAAGTCATCATTACGCGCTTGGCAGAGCACATGGCT 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000026162.12 ENSMUST00000100126.9 ENSMUST00000106119.9 ENSMUST00000106120.3 |
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| 3UTR-3UTR CCA 90 bp | CCTCAGGGAAAGGACTTTGTGCCCAGCAGACTGAACAAAGCCATGTGCTCTGCCCCCTTCAGCTTCCACTaGCCACAGACCTGGAACCAC | + |
|
Preference number: 2 (lower is better) Translates to: PQGKDFVPSRLNKAMCSAPFSFH*PQTWNH Trigger: GTGGTTCCAGGTCTGTGGCCAGTGGAAGCTGAAGGG...GGCAGAGCACATGGCTTTGTTCAGTCTGCTGGGCACAAAGTCCTTTCCCTGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026162.12 ENSMUST00000100126.9 ENSMUST00000106119.9 ENSMUST00000106120.3 |
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| 3UTR-3UTR GCA 90 bp | TTGCCCTCAGGGAAAGGACTTTGTGCCCAGCAGACTGAACAAAGCCATGTGCTCCTCTGGACTCAACCCTaGAGGCAGCTCCCTTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: LPSGKGLCAQQTEQSHVLLWTQP*RQLPSA Trigger: AGCTGAAGGGAGCTGCCTGCAGGGTTGAGTCCAGAG...GAGCACATGGCTTTGTTCAGTCTGCTGGGCACAAAGTCCTTTCCCTGAGGGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026162.12 ENSMUST00000100126.9 ENSMUST00000106119.9 ENSMUST00000106120.3 |
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| 3UTR-3UTR CCA 90 bp | AGTGAATCACTGTCCCCTGATCTGTACAGAGCCAAGGGTTCCATTGCCCTCAGGCCCTTCAGCTTCCACTaGCCACAGACCTGGAACCAC | + |
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Preference number: 2 (lower is better) Translates to: SESLSPDLYRAKGSIALRPFSFH*PQTWNH Trigger: GTGGTTCCAGGTCTGTGGCCAGTGGAAGCTGAAGGG...CCTGAGGGCAATGGAACCCTTGGCTCTGTACAGATCAGGGGACAGTGATTCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026162.12 ENSMUST00000100126.9 ENSMUST00000106119.9 ENSMUST00000106120.3 |
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| 3UTR-3UTR GCA 90 bp | TCTTCAGTGAATCACTGTCCCCTGATCTGTACAGAGCCAAGGGTTCCATTGCCCCTCTGGACTCAACCCTaGAGGCAGCTCCCTTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: SSVNHCPLICTEPRVPLPLWTQP*RQLPSA Trigger: AGCTGAAGGGAGCTGCCTGCAGGGTTGAGTCCAGAG...GGGCAATGGAACCCTTGGCTCTGTACAGATCAGGGGACAGTGATTCACTGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026162.12 ENSMUST00000100126.9 ENSMUST00000106119.9 ENSMUST00000106120.3 |
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| 3UTR-3UTR CCA 90 bp | CGTAATGATGACTTCCATGGTGTCTGCAGTCCCAGAGGTCTCCTAGGGCTTAGACCCTTCAGCTTCCACTaGCCACAGACCTGGAACCAC | + |
|
Preference number: 2 (lower is better) Translates to: RNDDFHGVCSPRGLLGLRPFSFH*PQTWNH Trigger: GTGGTTCCAGGTCTGTGGCCAGTGGAAGCTGAAGGG...TCTAAGCCCTAGGAGACCTCTGGGACTGCAGACACCATGGAAGTCATCATTACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026162.12 ENSMUST00000100126.9 ENSMUST00000106119.9 ENSMUST00000106120.3 |
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| 3UTR-3UTR GCA 90 bp | AGCAGACTGAACAAAGCCATGTGCTCTGCCAAGCGCGTAATGATGACTTCCATGCTCTGGACTCAACCCTaGAGGCAGCTCCCTTCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: SRLNKAMCSAKRVMMTSMLWTQP*RQLPSA Trigger: AGCTGAAGGGAGCTGCCTGCAGGGTTGAGTCCAGAG...CATGGAAGTCATCATTACGCGCTTGGCAGAGCACATGGCTTTGTTCAGTCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026162.12 ENSMUST00000100126.9 ENSMUST00000106119.9 ENSMUST00000106120.3 |
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| 3UTR-3UTR GCA 90 bp | ACTGAACAAAGCCATGTGCTCTGCCAAGCGCGTAATGATGACTTCCATGGTGTCCTCTGGACTCAACCCTaGAGGCAGCTCCCTTCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: TEQSHVLCQARNDDFHGVLWTQP*RQLPSA Trigger: AGCTGAAGGGAGCTGCCTGCAGGGTTGAGTCCAGAG...GACACCATGGAAGTCATCATTACGCGCTTGGCAGAGCACATGGCTTTGTTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026162.12 ENSMUST00000100126.9 ENSMUST00000106119.9 ENSMUST00000106120.3 |
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| 3UTR CAA 90 bp | TCAGTGAATCACTGTCCCCTGATCTGTACAGAGCCAAGGGTTCCATaGCCCTCAGGGAAAGGACTTTGTGCCCAGCAGACTGAACAAAGC | + |
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Preference number: 2 (lower is better) Translates to: SVNHCPLICTEPRVP*PSGKGLCAQQTEQS Trigger: GCTTTGTTCAGTCTGCTGGGCACAAAGTCCTTTCCCTGAGGGCAATGGAACCCTTGGCTCTGTACAGATCAGGGGACAGTGATTCACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026162.12 ENSMUST00000100126.9 ENSMUST00000106119.9 ENSMUST00000106120.3 |
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| 3UTR-3UTR TCA 90 bp | CAGCTTCCAAGGTCCTTCTTCAGTGAATCACTGTCCCCTGATCTGTACAGAGCCTTGTGCCCAGCAGACTaGACAAAGCCATGTGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: QLPRSFFSESLSPDLYRALCPAD*TKPCAL Trigger: CAGAGCACATGGCTTTGTTCAGTCTGCTGGGCACAA...GGCTCTGTACAGATCAGGGGACAGTGATTCACTGAAGAAGGACCTTGGAAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026162.12 ENSMUST00000100126.9 ENSMUST00000106119.9 ENSMUST00000106120.3 |
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| 3UTR-3UTR GCA 90 bp | CCTTCTTCAGTGAATCACTGTCCCCTGATCTGTACAGAGCCAAGGGTTCCATTGGACTTCCATGGTGTCTaGAGTCCCAGAGGTCTCCTA | + |
|
Preference number: 2 (lower is better) Translates to: PSSVNHCPLICTEPRVPLDFHGV*SPRGLL Trigger: TAGGAGACCTCTGGGACTGCAGACACCATGGAAGTC...CAATGGAACCCTTGGCTCTGTACAGATCAGGGGACAGTGATTCACTGAAGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026162.12 ENSMUST00000100126.9 ENSMUST00000106119.9 ENSMUST00000106120.3 |
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| 3UTR CAA 90 bp | GTCAGGAGGCTGTACTCTTGTTCATGTGACCAAAAGATGCCTAAATaGTTTTCCAGCTTCCAAGGTCCTTCTTCAGTGAATCACTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: VRRLYSCSCDQKMPK*FSSFQGPSSVNHCP Trigger: GGGACAGTGATTCACTGAAGAAGGACCTTGGAAGCTGGAAAACAATTTAGGCATCTTTTGGTCACATGAACAAGAGTACAGCCTCCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026162.12 ENSMUST00000100126.9 ENSMUST00000106119.9 ENSMUST00000106120.3 |
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| 3UTR-3UTR TCA 90 bp | CAAAAGATGCCTAAATTGTTTTCCAGCTTCCAAGGTCCTTCTTCAGTGAATCACTTGTGCCCAGCAGACTaGACAAAGCCATGTGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: QKMPKLFSSFQGPSSVNHLCPAD*TKPCAL Trigger: CAGAGCACATGGCTTTGTTCAGTCTGCTGGGCACAA...GTGATTCACTGAAGAAGGACCTTGGAAGCTGGAAAACAATTTAGGCATCTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026162.12 ENSMUST00000100126.9 ENSMUST00000106119.9 ENSMUST00000106120.3 |
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| 3UTR CCA 72 bp | GGCTTAGAACATAAGCCCATGCTGGTGGTCTCACTCTaGACTCAACCCTGCAGGCAGCTCCCTTCAGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: GLEHKPMLVVSL*TQPCRQLPSAS Trigger: GGAAGCTGAAGGGAGCTGCCTGCAGGGTTGAGTCCAGAGTGAGACCACCAGCATGGGCTTATGTTCTAAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026162.12 ENSMUST00000100126.9 ENSMUST00000106119.9 ENSMUST00000106120.3 |
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| 3UTR GCA 72 bp | CTTTGTGCCCAGCAGACTGAACAAAGCCATGTGCTCTaGCAAGCGCGTAATGATGACTTCCATGGTGTCTGC | + |
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Preference number: 3 (lower is better) Translates to: LCAQQTEQSHVL*QARNDDFHGVC Trigger: GCAGACACCATGGAAGTCATCATTACGCGCTTGGCAGAGCACATGGCTTTGTTCAGTCTGCTGGGCACAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026162.12 ENSMUST00000100126.9 ENSMUST00000106119.9 ENSMUST00000106120.3 |
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| 3UTR CCA 72 bp | AATGAAGCCTATGCCGATCGTCAAGAGCTGTGCGGCTaGGAATTCCCAATTTGGGGAAGAGTTGAGGAATGG | + |
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Preference number: 3 (lower is better) Translates to: NEAYADRQELCG*EFPIWGRVEEW Trigger: CCATTCCTCAACTCTTCCCCAAATTGGGAATTCCCAGCCGCACAGCTCTTGACGATCGGCATAGGCTTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106119.9 |
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| 3UTR CCA 72 bp | GGCTGGGAATTCCCAATTTGGGGAAGAGTTGAGGAATaGATCAGATGTCTGAAGACCATAGTCAGGAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: GWEFPIWGRVEE*IRCLKTIVRRL Trigger: CAGCCTCCTGACTATGGTCTTCAGACATCTGATCCATTCCTCAACTCTTCCCCAAATTGGGAATTCCCAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106119.9 |
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| 3UTR CCA 72 bp | GATCGTCAAGAGCTGTGCGGCTGGGAATTCCCAATTTaGGGAAGAGTTGAGGAATGGATCAGATGTCTGAAG | + |
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Preference number: 3 (lower is better) Translates to: DRQELCGWEFPI*GRVEEWIRCLK Trigger: CTTCAGACATCTGATCCATTCCTCAACTCTTCCCCAAATTGGGAATTCCCAGCCGCACAGCTCTTGACGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106119.9 |
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| 3UTR CCA 72 bp | GGAGATGATTCATCTGAAAGTCTTAGCTCCCTATTTTaGCCCCTGGAACCTGACATCTGGGCTTCCCGAACT | + |
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Preference number: 3 (lower is better) Translates to: GDDSSESLSSLF*PLEPDIWASRT Trigger: AGTTCGGGAAGCCCAGATGTCAGGTTCCAGGGGCCAAAATAGGGAGCTAAGACTTTCAGATGAATCATCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106119.9 |
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| 3UTR-3UTR CAA 90 bp | ACCATAGTCAGGAGGCTGTACTCTTGTTCATGTGACCAAAAGATGCCTAAATTGGAGCCAAGGGTTCCATaGCCCTCAGGGAAAGGACTT | + |
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Preference number: 3 (lower is better) Translates to: TIVRRLYSCSCDQKMPKLEPRVP*PSGKGL Trigger: AAGTCCTTTCCCTGAGGGCAATGGAACCCTTGGCTC...CAATTTAGGCATCTTTTGGTCACATGAACAAGAGTACAGCCTCCTGACTATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026162.12 ENSMUST00000100126.9 ENSMUST00000106119.9 ENSMUST00000106120.3 |
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| CDS-3UTR GCA 90 bp | CAGCTTCCACTGGCCACAGACCTGGAACCACCTTACCTCAAGTCAGGCACTGAGCAAGGGTCCCAGGCTTaGCCTCTATTGGAGAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: QLPLATDLEPPYLKSGTEQGSQA*PLLESS Trigger: AGAGCTCTCCAATAGAGGGCAAGCCTGGGACCCTTG...CTCAGTGCCTGACTTGAGGTAAGGTGGTTCCAGGTCTGTGGCCAGTGGAAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026162.12 ENSMUST00000106119.9 ENSMUST00000106120.3 |
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| 3UTR CAA 72 bp | CACTGTCCCCTGATCTGTACAGAGCCAAGGGTTCCATaGCCCTCAGGGAAAGGACTTTGTGCCCAGCAGACT | + |
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Preference number: 4 (lower is better) Translates to: HCPLICTEPRVP*PSGKGLCAQQT Trigger: AGTCTGCTGGGCACAAAGTCCTTTCCCTGAGGGCAATGGAACCCTTGGCTCTGTACAGATCAGGGGACAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026162.12 ENSMUST00000100126.9 ENSMUST00000106119.9 ENSMUST00000106120.3 |
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| CDS-3UTR TCA 90 bp | CCAAGGTCCTTCTTCAGTGAATCACTGTCCCCTGATCTGTACAGAGCCAAGGGTCGTCCTGGGTGTCTTTaGTCACAAGCTGTGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: PRSFFSESLSPDLYRAKGRPGCL*SQAVPA Trigger: GGCTGGCACAGCTTGTGATCAAAGACACCCAGGACG...ACCCTTGGCTCTGTACAGATCAGGGGACAGTGATTCACTGAAGAAGGACCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106120.3 |
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| CDS-3UTR GCA 90 bp | ATCTGTACAGAGCCAAGGGTTCCATTGCCCTCAGGGAAAGGACTTTGTGCCCAGCAAGGGTCCCAGGCTTaGCCTCTATTGGAGAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: ICTEPRVPLPSGKGLCAQQGSQA*PLLESS Trigger: AGAGCTCTCCAATAGAGGGCAAGCCTGGGACCCTTG...CTGGGCACAAAGTCCTTTCCCTGAGGGCAATGGAACCCTTGGCTCTGTACAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026162.12 ENSMUST00000106119.9 ENSMUST00000106120.3 |
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| CDS-3UTR CCA 90 bp | CTCTGCCAAGCGCGTAATGATGACTTCCATGGTGTCTGCAGTCCCAGAGGTCTCCCATTGGCAGACAGCTaGATGGTGACATCGGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: LCQARNDDFHGVCSPRGLPLADS*MVTSVK Trigger: CTTCACCGATGTCACCATCCAGCTGTCTGCCAATGG...GAGACCTCTGGGACTGCAGACACCATGGAAGTCATCATTACGCGCTTGGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106120.3 |
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| CDS-3UTR CCA 90 bp | TGTGCCCAGCAGACTGAACAAAGCCATGTGCTCTGCCAAGCGCGTAATGATGACCCATTGGCAGACAGCTaGATGGTGACATCGGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: CAQQTEQSHVLCQARNDDPLADS*MVTSVK Trigger: CTTCACCGATGTCACCATCCAGCTGTCTGCCAATGG...GTCATCATTACGCGCTTGGCAGAGCACATGGCTTTGTTCAGTCTGCTGGGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106120.3 |
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| CDS-3UTR CCA 90 bp | CTGTCCCCTGATCTGTACAGAGCCAAGGGTTCCATTGCCCTCAGGGAAAGGACTGCTCTTCGCGTGATCTaGGAAGGATGTAAAGAGCGT | + |
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Preference number: 4 (lower is better) Translates to: LSPDLYRAKGSIALRERTALRVI*EGCKER Trigger: ACGCTCTTTACATCCTTCCCAGATCACGCGAAGAGC...AGTCCTTTCCCTGAGGGCAATGGAACCCTTGGCTCTGTACAGATCAGGGGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106119.9 |
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| CDS-3UTR TCA 90 bp | CACTGGCCACAGACCTGGAACCACCTTACCTCAAGTCAGGCACTGAGGTACATTTCCCAGCTTTTATTCTaGGCATTCAGGGAGACCACC | + |
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Preference number: 4 (lower is better) Translates to: HWPQTWNHLTSSQALRYISQLLF*AFRETT Trigger: GGTGGTCTCCCTGAATGCTCAGAATAAAAGCTGGGA...AATGTACCTCAGTGCCTGACTTGAGGTAAGGTGGTTCCAGGTCTGTGGCCAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106120.3 |
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| CDS-3UTR CCA 90 bp | CCAAGGGTTCCATTGCCCTCAGGGAAAGGACTTTGTGCCCAGCAGACTGAACAAGCTCTTCGCGTGATCTaGGAAGGATGTAAAGAGCGT | + |
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Preference number: 4 (lower is better) Translates to: PRVPLPSGKGLCAQQTEQALRVI*EGCKER Trigger: ACGCTCTTTACATCCTTCCCAGATCACGCGAAGAGC...TTGTTCAGTCTGCTGGGCACAAAGTCCTTTCCCTGAGGGCAATGGAACCCTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106119.9 |
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| CDS-3UTR TCA 90 bp | CAGCTTCCAAGGTCCTTCTTCAGTGAATCACTGTCCCCTGATCTGTACAGAGCCTCCCAGCTTTTATTCTaGGCATTCAGGGAGACCACC | + |
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Preference number: 4 (lower is better) Translates to: QLPRSFFSESLSPDLYRASQLLF*AFRETT Trigger: GGTGGTCTCCCTGAATGCTCAGAATAAAAGCTGGGA...GGCTCTGTACAGATCAGGGGACAGTGATTCACTGAAGAAGGACCTTGGAAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106120.3 |
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| CDS-3UTR TCA 90 bp | ATCTGTACAGAGCCAAGGGTTCCATTGCCCTCAGGGAAAGGACTTTGTGCCCAGGAAGGCTTTTTATTCTaGGCATTCAGGGAGACCACC | + |
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Preference number: 4 (lower is better) Translates to: ICTEPRVPLPSGKGLCAQEGFLF*AFRETT Trigger: GGTGGTCTCCCTGAATGCTCAGAATAAAAAGCCTTC...CTGGGCACAAAGTCCTTTCCCTGAGGGCAATGGAACCCTTGGCTCTGTACAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100126.9 ENSMUST00000106119.9 |
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| CDS-3UTR CCA 90 bp | GTGAATCACTGTCCCCTGATCTGTACAGAGCCAAGGGTTCCATTGCCCTCAGGGGGACCTTGTCCTCGTTaGAAGGCTCTAAGATATTCA | + |
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Preference number: 4 (lower is better) Translates to: VNHCPLICTEPRVPLPSGGPCPR*KALRYS Trigger: TGAATATCTTAGAGCCTTCCAACGAGGACAAGGTCC...CCCTGAGGGCAATGGAACCCTTGGCTCTGTACAGATCAGGGGACAGTGATTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026162.12 |
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| CDS-3UTR TCA 90 bp | ACCATAGTCAGGAGGCTGTACTCTTGTTCATGTGACCAAAAGATGCCTAAATTGCGTCCTGGGTGTCTTTaGTCACAAGCTGTGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: TIVRRLYSCSCDQKMPKLRPGCL*SQAVPA Trigger: GGCTGGCACAGCTTGTGATCAAAGACACCCAGGACG...CAATTTAGGCATCTTTTGGTCACATGAACAAGAGTACAGCCTCCTGACTATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106120.3 |
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| CDS-3UTR TCA 90 bp | ATCGTCAAGAGCTGTGCGGCTGGGAATTCCCAATTTGGGGAAGAGTTGAGGAATGAAGGCTTTTTATTCTaGGCATTCAGGGAGACCACC | + |
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Preference number: 4 (lower is better) Translates to: IVKSCAAGNSQFGEELRNEGFLF*AFRETT Trigger: GGTGGTCTCCCTGAATGCTCAGAATAAAAAGCCTTC...ATTCCTCAACTCTTCCCCAAATTGGGAATTCCCAGCCGCACAGCTCTTGACGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106119.9 |
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| CDS-3UTR TCA 90 bp | TCTGTACAGAGCCAAGGGTTCCATTGCCCTCAGGGAAAGGACTTTGTGCCCAGCCTAAGATATTCAGGGTaGTGTTTTTGTAGCATCTCT | + |
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Preference number: 4 (lower is better) Translates to: SVQSQGFHCPQGKDFVPSLRYSG*CFCSIS Trigger: AGAGATGCTACAAAAACATCACCCTGAATATCTTAG...GCTGGGCACAAAGTCCTTTCCCTGAGGGCAATGGAACCCTTGGCTCTGTACAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106120.3 |
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| CDS-3UTR GCA 90 bp | ACCATAGTCAGGAGGCTGTACTCTTGTTCATGTGACCAAAAGATGCCTAAATTGCAAGGGTCCCAGGCTTaGCCTCTATTGGAGAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: TIVRRLYSCSCDQKMPKLQGSQA*PLLESS Trigger: AGAGCTCTCCAATAGAGGGCAAGCCTGGGACCCTTG...CAATTTAGGCATCTTTTGGTCACATGAACAAGAGTACAGCCTCCTGACTATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026162.12 ENSMUST00000106119.9 ENSMUST00000106120.3 |
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| 3UTR CAA 72 bp | CTGTACTCTTGTTCATGTGACCAAAAGATGCCTAAATaGTTTTCCAGCTTCCAAGGTCCTTCTTCAGTGAAT | + |
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Preference number: 4 (lower is better) Translates to: LYSCSCDQKMPK*FSSFQGPSSVN Trigger: ATTCACTGAAGAAGGACCTTGGAAGCTGGAAAACAATTTAGGCATCTTTTGGTCACATGAACAAGAGTACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026162.12 ENSMUST00000100126.9 ENSMUST00000106119.9 ENSMUST00000106120.3 |
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| CDS-3UTR CAA 90 bp | GCTGGTGGTCTCACTCTGGACTCAACCCTGCAGGCAGCTCCCTTCAGCTTCCACGTCTTGTCCTTTCCATaGGCAGACAGCTGGATGGTG | + |
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Preference number: 5 (lower is better) Translates to: AGGLTLDSTLQAAPFSFHVLSFP*ADSWMV Trigger: CACCATCCAGCTGTCTGCCAATGGAAAGGACAAGAC...GTGGAAGCTGAAGGGAGCTGCCTGCAGGGTTGAGTCCAGAGTGAGACCACCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106120.3 |
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| CDS GCA 90 bp | GATGGTGACATCGGTGAAGGTGTTAGAGATGTTACAGGTCATCACTaGAGGATTGCCTCGAGGCACAGACAGGATGCCCTCCGTGCAGAT | + |
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Preference number: 5 (lower is better) Translates to: DGDIGEGVRDVTGHH*RIASRHRQDALRAD Trigger: ATCTGCACGGAGGGCATCCTGTCTGTGCCTCGAGGCAATCCTGCAGTGATGACCTGTAACATCTCTAACACCTTCACCGATGTCACCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106120.3 |
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| CDS CCA 90 bp | GATGACAGTGATGACTCCCACAAGGGTCCCAGGCTTGCCCTCTATTaGAGAGCTCTTCGCGTGATCTGGGAAGGATGTAAAGAGCGTAGT | + |
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Preference number: 5 (lower is better) Translates to: DDSDDSHKGPRLALY*RALRVIWEGCKERS Trigger: ACTACGCTCTTTACATCCTTCCCAGATCACGCGAAGAGCTCTCCAATAGAGGGCAAGCCTGGGACCCTTGTGGGAGTCATCACTGTCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106119.9 |
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| CDS-3UTR CAA 90 bp | CTTCCAAGGTCCTTCTTCAGTGAATCACTGTCCCCTGATCTGTACAGAGCCAAGGTCTTGTCCTTTCCATaGGCAGACAGCTGGATGGTG | + |
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Preference number: 5 (lower is better) Translates to: LPRSFFSESLSPDLYRAKVLSFP*ADSWMV Trigger: CACCATCCAGCTGTCTGCCAATGGAAAGGACAAGAC...CTTGGCTCTGTACAGATCAGGGGACAGTGATTCACTGAAGAAGGACCTTGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106120.3 |
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| CDS-3UTR CAA 90 bp | CCTCAGGGAAAGGACTTTGTGCCCAGCAGACTGAACAAAGCCATGTGCTCTGCCCCAAGAGAAGTTTCCTaGGGGCTTTTTATCGAAGAT | + |
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Preference number: 5 (lower is better) Translates to: PQGKDFVPSRLNKAMCSAPREVS*GLFIED Trigger: ATCTTCGATAAAAAGCCCCAAGGAAACTTCTCTTGG...GGCAGAGCACATGGCTTTGTTCAGTCTGCTGGGCACAAAGTCCTTTCCCTGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106120.3 |
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| CDS-3UTR CAA 90 bp | CAGCTTCCAAGGTCCTTCTTCAGTGAATCACTGTCCCCTGATCTGTACAGAGCCCCAAGAGAAGTTTCCTaGGGGCTTTTTATCGAAGAT | + |
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Preference number: 5 (lower is better) Translates to: QLPRSFFSESLSPDLYRAPREVS*GLFIED Trigger: ATCTTCGATAAAAAGCCCCAAGGAAACTTCTCTTGG...GGCTCTGTACAGATCAGGGGACAGTGATTCACTGAAGAAGGACCTTGGAAGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106120.3 |
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| CDS CCA 90 bp | GGCTTTTTATCGAAGATGGTCTTGTCCTTTCCATTGGCAGACAGCTaGATGGTGACATCGGTGAAGGTGTTAGAGATGTTACAGGTCATC | + |
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Preference number: 5 (lower is better) Translates to: GFLSKMVLSFPLADS*MVTSVKVLEMLQVI Trigger: GATGACCTGTAACATCTCTAACACCTTCACCGATGTCACCATCCAGCTGTCTGCCAATGGAAAGGACAAGACCATCTTCGATAAAAAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106120.3 |
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| CDS TCA 72 bp | CCCTCCGTGCAGATAGGGTTGTCCCAGCTTTTATTCTaGGCATTCAGGGAGACCACCAGGAGCAGGATGCTG | + |
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Preference number: 6 (lower is better) Translates to: PSVQIGLSQLLF*AFRETTRSRML Trigger: CAGCATCCTGCTCCTGGTGGTCTCCCTGAATGCTCAGAATAAAAGCTGGGACAACCCTATCTGCACGGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106120.3 |
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| CDS CCA 72 bp | TGGCGTCCATGCAGCTGCCACAAGTATATCCCTGTGTaGTCGTCCTGGGTGTCTTTGATCACAAGCTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: WRPCSCHKYIPV*SSWVSLITSCA Trigger: GGCACAGCTTGTGATCAAAGACACCCAGGACGACCACACAGGGATATACTTGTGGCAGCTGCATGGACGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106120.3 |
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| CDS CCA 72 bp | GATGACTCCCACAAGGGTCCCAGGCTTGCCCTCTATTaGAGAGCTCTTCGCGTGATCTGGGAAGGATGTAAA | + |
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Preference number: 6 (lower is better) Translates to: DDSHKGPRLALY*RALRVIWEGCK Trigger: TTTACATCCTTCCCAGATCACGCGAAGAGCTCTCCAATAGAGGGCAAGCCTGGGACCCTTGTGGGAGTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106119.9 |
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| CDS TCA 72 bp | TCTGGGACCTTGTCCTCGTTGGAAGGCTTTTTATTCTaGGCATTCAGGGAGACCACCAGGAGCAGGATGCTG | + |
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Preference number: 6 (lower is better) Translates to: SGTLSSLEGFLF*AFRETTRSRML Trigger: CAGCATCCTGCTCCTGGTGGTCTCCCTGAATGCTCAGAATAAAAAGCCTTCCAACGAGGACAAGGTCCCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100126.9 ENSMUST00000106119.9 |
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| CDS CAA 90 bp | CCACGCCAAGAGAAGTTTCCTTGGGGCTTTTTATCGAAGATGGTCTaGTCCTTTCCATTGGCAGACAGCTGGATGGTGACATCGGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: PRQEKFPWGFLSKMV*SFPLADSWMVTSVK Trigger: CTTCACCGATGTCACCATCCAGCTGTCTGCCAATGGAAAGGACAAGACCATCTTCGATAAAAAGCCCCAAGGAAACTTCTCTTGGCGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106120.3 |
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| CDS CCA 72 bp | ACTTGGAGCTCCCACCCACGCCAAGAGAAGTTTCCTTaGGGCTTTTTATCGAAGATGGTCTTGTCCTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: TWSSHPRQEKFP*GFLSKMVLSFP Trigger: TGGAAAGGACAAGACCATCTTCGATAAAAAGCCCCAAGGAAACTTCTCTTGGCGTGGGTGGGAGCTCCAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106120.3 |
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| CDS CAA 72 bp | TGGGGCTTTTTATCGAAGATGGTCTTGTCCTTTCCATaGGCAGACAGCTGGATGGTGACATCGGTGAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: WGFLSKMVLSFP*ADSWMVTSVKV Trigger: CACCTTCACCGATGTCACCATCCAGCTGTCTGCCAATGGAAAGGACAAGACCATCTTCGATAAAAAGCCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106120.3 |
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| CDS CAA 72 bp | AACTTGGAGCTCCCACCCACGCCAAGAGAAGTTTCCTaGGGGCTTTTTATCGAAGATGGTCTTGTCCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: NLELPPTPREVS*GLFIEDGLVLS Trigger: GGAAAGGACAAGACCATCTTCGATAAAAAGCCCCAAGGAAACTTCTCTTGGCGTGGGTGGGAGCTCCAAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106120.3 |
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| CDS CAA 90 bp | AAGTTTCCTTGGGGCTTTTTATCGAAGATGGTCTTGTCCTTTCCATaGGCAGACAGCTGGATGGTGACATCGGTGAAGGTGTTAGAGATG | + |
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Preference number: 6 (lower is better) Translates to: KFPWGFLSKMVLSFP*ADSWMVTSVKVLEM Trigger: CATCTCTAACACCTTCACCGATGTCACCATCCAGCTGTCTGCCAATGGAAAGGACAAGACCATCTTCGATAAAAAGCCCCAAGGAAACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106120.3 |
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| CDS CAA 72 bp | GAGAAGTTTCCTTGGGGCTTTTTATCGAAGATGGTCTaGTCCTTTCCATTGGCAGACAGCTGGATGGTGACA | + |
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Preference number: 6 (lower is better) Translates to: EKFPWGFLSKMV*SFPLADSWMVT Trigger: TGTCACCATCCAGCTGTCTGCCAATGGAAAGGACAAGACCATCTTCGATAAAAAGCCCCAAGGAAACTTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026162.12 ENSMUST00000106120.3 |
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