Pregenerated sensors for SECISBP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035139Ensembl transcript IDs: ENSMUST00000040117.15, ENSMUST00000110044.2
Found 238 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTGCACACCCCGGAGCACAGCTCCTGGTTCACCATCCCCAAACTTaGTTGAGCAGCACTGTAATAGTGGGTCCTAGGCAGCCACGGTAC | + |
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Preference number: 1 (lower is better) Translates to: PAHPGAQLLVHHPQT*LSSTVIVGPRQPRY Trigger: GTACCGTGGCTGCCTAGGACCCACTATTACAGTGCTGCTCAACCAAGTTTGGGGATGGTGAACCAGGAGCTGTGCTCCGGGGTGTGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| 3UTR CCA 90 bp | GAAGGACGGTGCCCAGGGGGCTACAGCAGATCCATACAGTCATCATaGAAGCATGCCTTGCTGCTGTCCCTCTTTCCTACTGTGAAACAC | + |
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Preference number: 1 (lower is better) Translates to: EGRCPGGYSRSIQSS*KHALLLSLFPTVKH Trigger: GTGTTTCACAGTAGGAAAGAGGGACAGCAGCAAGGCATGCTTCCATGATGACTGTATGGATCTGCTGTAGCCCCCTGGGCACCGTCCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| 3UTR GCA 90 bp | GTGCCCAGGGGGCTACAGCAGATCCATACAGTCATCATGGAAGCATaGCTTGCTGCTGTCCCTCTTTCCTACTGTGAAACACTACATGTA | + |
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Preference number: 1 (lower is better) Translates to: VPRGLQQIHTVIMEA*LAAVPLSYCETLHV Trigger: TACATGTAGTGTTTCACAGTAGGAAAGAGGGACAGCAGCAAGGCATGCTTCCATGATGACTGTATGGATCTGCTGTAGCCCCCTGGGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| 3UTR CCA 90 bp | AACATGCCATCCTTTTCTCAAAGCTCAAGTACAAAACACTCAGGCTaGTTGGTATTGGGTAGGCTGCAGCAGTCAGTAGATGGCACAGAC | + |
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Preference number: 1 (lower is better) Translates to: NMPSFSQSSSTKHSG*LVLGRLQQSVDGTD Trigger: GTCTGTGCCATCTACTGACTGCTGCAGCCTACCCAATACCAACCAGCCTGAGTGTTTTGTACTTGAGCTTTGAGAAAAGGATGGCATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| 3UTR TCA 90 bp | AGTCATCATGGAAGCATGCCTTGCTGCTGTCCCTCTTTCCTACTGTaGAACACTACATGTACCATTAACTACCATTCCCTTAACATGATT | + |
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Preference number: 1 (lower is better) Translates to: SHHGSMPCCCPSFLL*NTTCTINYHSLNMI Trigger: AATCATGTTAAGGGAATGGTAGTTAATGGTACATGTAGTGTTTCACAGTAGGAAAGAGGGACAGCAGCAAGGCATGCTTCCATGATGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| 3UTR TCA 90 bp | TTTCCAACTCTACAGTCACATAAATACATCATGTCAGTAAAGAACTaGGAAGGAAGTCTTTTCCTGCCTCTCCCATCCTTACCCAATACA | + |
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Preference number: 1 (lower is better) Translates to: FPTLQSHKYIMSVKN*EGSLFLPLPSLPNT Trigger: TGTATTGGGTAAGGATGGGAGAGGCAGGAAAAGACTTCCTTCTCAGTTCTTTACTGACATGATGTATTTATGTGACTGTAGAGTTGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| 3UTR GCA 90 bp | AGTCACAGTTATTTAAGTGCAACTGAAAAACCTGAAGGAAAAAGATaGATCAAATACGTATCAGAGCAGAAACTTGGAGAAGCATCTTTT | + |
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Preference number: 1 (lower is better) Translates to: SHSYLSATEKPEGKR*IKYVSEQKLGEASF Trigger: AAAAGATGCTTCTCCAAGTTTCTGCTCTGATACGTATTTGATGCATCTTTTTCCTTCAGGTTTTTCAGTTGCACTTAAATAACTGTGACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| 3UTR-3UTR GCA 90 bp | AATGGCAGGACTCCACCCCCGAGGAAGGGCCCTGCACACCCCGGAGCACAGCTCAGTGCTACAACCAGGTaGTTCCTTTGCCCTGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: NGRTPPPRKGPAHPGAQLSATTR*FLCPEA Trigger: GGCCTCAGGGCAAAGGAAGCACCTGGTTGTAGCACT...GAGCTGTGCTCCGGGGTGTGCAGGGCCCTTCCTCGGGGGTGGAGTCCTGCCATT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| 3UTR-3UTR TCA 90 bp | CCCCCGAGGAAGGGCCCTGCACACCCCGGAGCACAGCTCCTGGTTCACCATCCCATGTCAGTAAAGAACTaGGAAGGAAGTCTTTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: PPRKGPAHPGAQLLVHHPMSVKN*EGSLFL Trigger: CAGGAAAAGACTTCCTTCTCAGTTCTTTACTGACAT...GGGATGGTGAACCAGGAGCTGTGCTCCGGGGTGTGCAGGGCCCTTCCTCGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| 3UTR-3UTR GCA 90 bp | TGCACACCCCGGAGCACAGCTCCTGGTTCACCATCCCCAAACTTGGTTGAGCAGTTTCCAGATCCAGAGTaGAGAGAGAAAGAACCGAAG | + |
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Preference number: 2 (lower is better) Translates to: CTPRSTAPGSPSPNLVEQFPDPE*REKEPK Trigger: CTTCGGTTCTTTCTCTCTGCACTCTGGATCTGGAAA...CTGCTCAACCAAGTTTGGGGATGGTGAACCAGGAGCTGTGCTCCGGGGTGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| 3UTR-3UTR GCA 90 bp | CTGTCTCCGTCTCTCAGGAAACAAAAGTATCACCACTCAGCCCAGCGGCAGTCTGTCATCATGGAAGCATaGCTTGCTGCTGTCCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: LSPSLRKQKYHHSAQRQSVIMEA*LAAVPL Trigger: AAGAGGGACAGCAGCAAGGCATGCTTCCATGATGAC...AGACTGCCGCTGGGCTGAGTGGTGATACTTTTGTTTCCTGAGAGACGGAGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| 3UTR-3UTR GCA 90 bp | GACGAAGATGTTCTCTGTCTCCGTCTCTCAGGAAACAAAAGTATCACCACTCAGACTCAGGAAGGACGGTaGCCAGGGGGCTACAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: DEDVLCLRLSGNKSITTQTQEGR*PGGYSR Trigger: TCTGCTGTAGCCCCCTGGGCACCGTCCTTCCTGAGT...CTGAGTGGTGATACTTTTGTTTCCTGAGAGACGGAGACAGAGAACATCTTCGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| 3UTR CAA 90 bp | CCAGGGGGCTACAGCAGATCCATACAGTCATCATGGAAGCATGCCTaGCTGCTGTCCCTCTTTCCTACTGTGAAACACTACATGTACCAT | + |
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Preference number: 2 (lower is better) Translates to: PGGYSRSIQSSWKHA*LLSLFPTVKHYMYH Trigger: ATGGTACATGTAGTGTTTCACAGTAGGAAAGAGGGACAGCAGCAAGGCATGCTTCCATGATGACTGTATGGATCTGCTGTAGCCCCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGTGCTACAACCAGGTGCTTCCTTTGCCCTGAGGCCCAGTGAATTTCCAACTAAGGAAGTCTTTTCCTaGCTCTCCCATCCTTACCCA | + |
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Preference number: 2 (lower is better) Translates to: SVLQPGASFALRPSEFPTKEVFS*LSHPYP Trigger: TGGGTAAGGATGGGAGAGGCAGGAAAAGACTTCCTT...AGTTGGAAATTCACTGGGCCTCAGGGCAAAGGAAGCACCTGGTTGTAGCACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| 3UTR-3UTR GCA 90 bp | GACGAAGATGTTCTCTGTCTCCGTCTCTCAGGAAACAAAAGTATCACCACTCAGGGAAGCATGCCTTGCTaGTGTCCCTCTTTCCTACTG | + |
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Preference number: 2 (lower is better) Translates to: DEDVLCLRLSGNKSITTQGSMPC*CPSFLL Trigger: CAGTAGGAAAGAGGGACAGCAGCAAGGCATGCTTCC...CTGAGTGGTGATACTTTTGTTTCCTGAGAGACGGAGACAGAGAACATCTTCGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| 3UTR CAA 90 bp | ATGCCATCCTTTTCTCAAAGCTCAAGTACAAAACACTCAGGCTGGTaGGTATTGGGTAGGCTGCAGCAGTCAGTAGATGGCACAGACTCA | + |
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Preference number: 2 (lower is better) Translates to: MPSFSQSSSTKHSGW*VLGRLQQSVDGTDS Trigger: TGAGTCTGTGCCATCTACTGACTGCTGCAGCCTACCCAATACCAACCAGCCTGAGTGTTTTGTACTTGAGCTTTGAGAAAAGGATGGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| 3UTR-3UTR CCA 90 bp | CAACTGAAAAACCTGAAGGAAAAAGATGCATCAAATACGTATCAGAGCAGAAACAACACTCAGGCTGGTTaGTATTGGGTAGGCTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: QLKNLKEKDASNTYQSRNNTQAG*YWVGCS Trigger: GCTGCAGCCTACCCAATACCAACCAGCCTGAGTGTT...GTTTCTGCTCTGATACGTATTTGATGCATCTTTTTCCTTCAGGTTTTTCAGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| 3UTR CCA 72 bp | TCTGAGGCTCATCTTAGCAAATCCTTGGCAGCACAATaGCAGGACTCCACCCCCGAGGAAGGGCCCTGCACA | + |
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Preference number: 3 (lower is better) Translates to: SEAHLSKSLAAQ*QDSTPEEGPCT Trigger: TGTGCAGGGCCCTTCCTCGGGGGTGGAGTCCTGCCATTGTGCTGCCAAGGATTTGCTAAGATGAGCCTCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| 3UTR CCA 72 bp | CCCGGAGCACAGCTCCTGGTTCACCATCCCCAAACTTaGTTGAGCAGCACTGTAATAGTGGGTCCTAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: PGAQLLVHHPQT*LSSTVIVGPRQ Trigger: CTGCCTAGGACCCACTATTACAGTGCTGCTCAACCAAGTTTGGGGATGGTGAACCAGGAGCTGTGCTCCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| 3UTR-3UTR CAA 90 bp | CTGTCTCCGTCTCTCAGGAAACAAAAGTATCACCACTCAGCCCAGCGGCAGTCTTCATGGAAGCATGCCTaGCTGCTGTCCCTCTTTCCT | + |
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Preference number: 3 (lower is better) Translates to: LSPSLRKQKYHHSAQRQSSWKHA*LLSLFP Trigger: AGGAAAGAGGGACAGCAGCAAGGCATGCTTCCATGA...AGACTGCCGCTGGGCTGAGTGGTGATACTTTTGTTTCCTGAGAGACGGAGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| 3UTR GCA 72 bp | CAGGACCACGTTCTCCAGCGTTTTCCAGATCCAGAGTaGAGAGAGAAAGAACCGAAGCTGATCAATAGGCTC | + |
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Preference number: 3 (lower is better) Translates to: QDHVLQRFPDPE*REKEPKLINRL Trigger: GAGCCTATTGATCAGCTTCGGTTCTTTCTCTCTGCACTCTGGATCTGGAAAACGCTGGAGAACGTGGTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| 3UTR CCA 72 bp | TTTCTTCAAAGCGTTCTGGAGCTGGAAGTCCTGCTGTaGCAGCGTACAAGGGACGAAGATGTTCTCTGTCTC | + |
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Preference number: 3 (lower is better) Translates to: FLQSVLELEVLL*QRTRDEDVLCL Trigger: GAGACAGAGAACATCTTCGTCCCTTGTACGCTGCCACAGCAGGACTTCCAGCTCCAGAACGCTTTGAAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| 3UTR CCA 72 bp | TTGGAGAAGCATCTTTTCTTCAAAGCGTTCTGGAGCTaGAAGTCCTGCTGTGGCAGCGTACAAGGGACGAAG | + |
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Preference number: 3 (lower is better) Translates to: LEKHLFFKAFWS*KSCCGSVQGTK Trigger: CTTCGTCCCTTGTACGCTGCCACAGCAGGACTTCCAGCTCCAGAACGCTTTGAAGAAAAGATGCTTCTCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| 3UTR TCA 72 bp | TGGACTCAGTGCTACAACCAGGTGCTTCCTTTGCCCTaGGGCCCAGTGAATTTCCAACTCTACAGTCACATA | + |
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Preference number: 3 (lower is better) Translates to: WTQCYNQVLPLP*GPVNFQLYSHI Trigger: TATGTGACTGTAGAGTTGGAAATTCACTGGGCCTCAGGGCAAAGGAAGCACCTGGTTGTAGCACTGAGTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| 3UTR GCA 72 bp | GGGCTACAGCAGATCCATACAGTCATCATGGAAGCATaGCTTGCTGCTGTCCCTCTTTCCTACTGTGAAACA | + |
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Preference number: 3 (lower is better) Translates to: GLQQIHTVIMEA*LAAVPLSYCET Trigger: TGTTTCACAGTAGGAAAGAGGGACAGCAGCAAGGCATGCTTCCATGATGACTGTATGGATCTGCTGTAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| 3UTR GCA 72 bp | CATCTTTTCTTCAAAGCGTTCTGGAGCTGGAAGTCCTaGTGTGGCAGCGTACAAGGGACGAAGATGTTCTCT | + |
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Preference number: 3 (lower is better) Translates to: HLFFKAFWSWKS*CGSVQGTKMFS Trigger: AGAGAACATCTTCGTCCCTTGTACGCTGCCACAGCAGGACTTCCAGCTCCAGAACGCTTTGAAGAAAAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| 3UTR TCA 72 bp | GGAAGCATGCCTTGCTGCTGTCCCTCTTTCCTACTGTaGAACACTACATGTACCATTAACTACCATTCCCTT | + |
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Preference number: 3 (lower is better) Translates to: GSMPCCCPSFLL*NTTCTINYHSL Trigger: AAGGGAATGGTAGTTAATGGTACATGTAGTGTTTCACAGTAGGAAAGAGGGACAGCAGCAAGGCATGCTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| 3UTR CCA 72 bp | TCCTTTTCTCAAAGCTCAAGTACAAAACACTCAGGCTaGTTGGTATTGGGTAGGCTGCAGCAGTCAGTAGAT | + |
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Preference number: 3 (lower is better) Translates to: SFSQSSSTKHSG*LVLGRLQQSVD Trigger: ATCTACTGACTGCTGCAGCCTACCCAATACCAACCAGCCTGAGTGTTTTGTACTTGAGCTTTGAGAAAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| 3UTR TCA 72 bp | CTACAGTCACATAAATACATCATGTCAGTAAAGAACTaGGAAGGAAGTCTTTTCCTGCCTCTCCCATCCTTA | + |
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Preference number: 3 (lower is better) Translates to: LQSHKYIMSVKN*EGSLFLPLPSL Trigger: TAAGGATGGGAGAGGCAGGAAAAGACTTCCTTCTCAGTTCTTTACTGACATGATGTATTTATGTGACTGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| 3UTR CCA 72 bp | AAAAAGATGCATCAAATACGTATCAGAGCAGAAACTTaGAGAAGCATCTTTTCTTCAAAGCGTTCTGGAGCT | + |
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Preference number: 3 (lower is better) Translates to: KKMHQIRIRAET*RSIFSSKRSGA Trigger: AGCTCCAGAACGCTTTGAAGAAAAGATGCTTCTCCAAGTTTCTGCTCTGATACGTATTTGATGCATCTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| 3UTR GCA 72 bp | TATTTAAGTGCAACTGAAAAACCTGAAGGAAAAAGATaGATCAAATACGTATCAGAGCAGAAACTTGGAGAA | + |
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Preference number: 3 (lower is better) Translates to: YLSATEKPEGKR*IKYVSEQKLGE Trigger: TTCTCCAAGTTTCTGCTCTGATACGTATTTGATGCATCTTTTTCCTTCAGGTTTTTCAGTTGCACTTAAATA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| 3UTR CCA 72 bp | TACCATTCCCTTAACATGATTAAGTGTATAGGTCAGTaGCATTACATCTATATACATTCCATAAACGTTACC | + |
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Preference number: 3 (lower is better) Translates to: YHSLNMIKCIGQ*HYIYIHSINVT Trigger: GGTAACGTTTATGGAATGTATATAGATGTAATGCCACTGACCTATACACTTAATCATGTTAAGGGAATGGTA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| CDS-3UTR TCA 90 bp | CCCCCGAGGAAGGGCCCTGCACACCCCGGAGCACAGCTCCTGGTTCACCATCCCGGGCTGGGAGGGGACTaGGGTCCAGGTTCTCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: PPRKGPAHPGAQLLVHHPGLGGD*GPGSPA Trigger: GGCAGGAGAACCTGGACCTCAGTCCCCTCCCAGCCC...GGGATGGTGAACCAGGAGCTGTGCTCCGGGGTGTGCAGGGCCCTTCCTCGGGGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR GCA 90 bp | CCCCCGAGGAAGGGCCCTGCACACCCCGGAGCACAGCTCCTGGTTCACCATCCCGCGTGCTGCTGCTGCTaGTGCTTCTCCAGCGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: PPRKGPAHPGAQLLVHHPACCCC*CFSSAA Trigger: GGCCGCGCTGGAGAAGCAGCAGCAGCAGCAGCACGC...GGGATGGTGAACCAGGAGCTGTGCTCCGGGGTGTGCAGGGCCCTTCCTCGGGGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR TCA 90 bp | CCCCCGAGGAAGGGCCCTGCACACCCCGGAGCACAGCTCCTGGTTCACCATCCCGCCAGCTGGCTCCTCTaGCTCACCCTCAACCACAGG | + |
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Preference number: 4 (lower is better) Translates to: PPRKGPAHPGAQLLVHHPASWLL*LTLNHR Trigger: CCTGTGGTTGAGGGTGAGTCAGAGGAGCCAGCTGGC...GGGATGGTGAACCAGGAGCTGTGCTCCGGGGTGTGCAGGGCCCTTCCTCGGGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR GCA 90 bp | AATGGCAGGACTCCACCCCCGAGGAAGGGCCCTGCACACCCCGGAGCACAGCTCTGCTGCTGCTGCTGCTaGTTCTCCAGCGCGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: NGRTPPPRKGPAHPGAQLCCCCC*FSSAAS Trigger: GCTGGCCGCGCTGGAGAAGCAGCAGCAGCAGCAGCA...GAGCTGTGCTCCGGGGTGTGCAGGGCCCTTCCTCGGGGGTGGAGTCCTGCCATT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR GCA 90 bp | CCCCCGAGGAAGGGCCCTGCACACCCCGGAGCACAGCTCCTGGTTCACCATCCCTTGGCGTGCGAGGCGTaGTGCTGCTGCTGCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: PPRKGPAHPGAQLLVHHPLACEA*CCCCCF Trigger: GAAGCAGCAGCAGCAGCAGCACGCCTCGCACGCCAA...GGGATGGTGAACCAGGAGCTGTGCTCCGGGGTGTGCAGGGCCCTTCCTCGGGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CCA 90 bp | AGGACTCCACCCCCGAGGAAGGGCCCTGCACACCCCGGAGCACAGCTCCTGGTTGGATGGGGTCTTGCATaGGTGGGCTGGGAGGGGACT | + |
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Preference number: 4 (lower is better) Translates to: RTPPPRKGPAHPGAQLLVGWGLA*VGWEGT Trigger: AGTCCCCTCCCAGCCCACCCATGCAAGACCCCATCC...AACCAGGAGCTGTGCTCCGGGGTGTGCAGGGCCCTTCCTCGGGGGTGGAGTCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CCA 90 bp | TGGCAGGACTCCACCCCCGAGGAAGGGCCCTGCACACCCCGGAGCACAGCTCCTTCCGGCTGTGGATCTTaGGGAAGGTGGCACTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: WQDSTPEEGPCTPRSTAPSGCGS*GRWHCQ Trigger: CTGACAGTGCCACCTTCCCCAAGATCCACAGCCGGA...AGGAGCTGTGCTCCGGGGTGTGCAGGGCCCTTCCTCGGGGGTGGAGTCCTGCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CCA 90 bp | AGGACTCCACCCCCGAGGAAGGGCCCTGCACACCCCGGAGCACAGCTCCTGGTTAGGCTGGCAAGCCTCTaGGTCCCTCTGGAACTCTGT | + |
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Preference number: 4 (lower is better) Translates to: RTPPPRKGPAHPGAQLLVRLASL*VPLELC Trigger: ACAGAGTTCCAGAGGGACCCAGAGGCTTGCCAGCCT...AACCAGGAGCTGTGCTCCGGGGTGTGCAGGGCCCTTCCTCGGGGGTGGAGTCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CCA 90 bp | AATGGCAGGACTCCACCCCCGAGGAAGGGCCCTGCACACCCCGGAGCACAGCTCGTGGCTCTTCTCCAGTaGAAGGGAGGGTGCCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: NGRTPPPRKGPAHPGAQLVALLQ*KGGCLL Trigger: AAGAAGGCACCCTCCCTTCCACTGGAGAAGAGCCAC...GAGCTGTGCTCCGGGGTGTGCAGGGCCCTTCCTCGGGGGTGGAGTCCTGCCATT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CCA 90 bp | CCCCCGAGGAAGGGCCCTGCACACCCCGGAGCACAGCTCCTGGTTCACCATCCCTTCTTCTGTCTTCTCTaGACCTGTGGGGTTGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: PPRKGPAHPGAQLLVHHPFFCLL*TCGVVL Trigger: CAGGACAACCCCACAGGTCCAGAGAAGACAGAAGAA...GGGATGGTGAACCAGGAGCTGTGCTCCGGGGTGTGCAGGGCCCTTCCTCGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CCA 90 bp | TGCACACCCCGGAGCACAGCTCCTGGTTCACCATCCCCAAACTTGGTTGAGCAGGCCTCTGGGTCCCTCTaGAACTCTGTGCCAGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: CTPRSTAPGSPSPNLVEQASGSL*NSVPAG Trigger: GCCAGCTGGCACAGAGTTCCAGAGGGACCCAGAGGC...CTGCTCAACCAAGTTTGGGGATGGTGAACCAGGAGCTGTGCTCCGGGGTGTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CCA 90 bp | CCTGCACACCCCGGAGCACAGCTCCTGGTTCACCATCCCCAAACTTGGTTGAGCCGGAACCTCCGGCTGTaGATCTTGGGGAAGGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: PAHPGAQLLVHHPQTWLSRNLRL*ILGKVA Trigger: TGCCACCTTCCCCAAGATCCACAGCCGGAGGTTCCG...GCTCAACCAAGTTTGGGGATGGTGAACCAGGAGCTGTGCTCCGGGGTGTGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR TCA 90 bp | AGGACTCCACCCCCGAGGAAGGGCCCTGCACACCCCGGAGCACAGCTCCTGGTTACAGCTCCATCAGTGTaGTCGCTCTTCACCATTTTG | + |
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Preference number: 4 (lower is better) Translates to: RTPPPRKGPAHPGAQLLVTAPSV*SLFTIL Trigger: CAAAATGGTGAAGAGCGATCACACTGATGGAGCTGT...AACCAGGAGCTGTGCTCCGGGGTGTGCAGGGCCCTTCCTCGGGGGTGGAGTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR TCA 90 bp | CCTGCACACCCCGGAGCACAGCTCCTGGTTCACCATCCCCAAACTTGGTTGAGCTGGCACTGCTCCAACTaGGAACACGACGGGTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: PAHPGAQLLVHHPQTWLSWHCSN*EHDGSG Trigger: TCCAGACCCGTCGTGTTCTCAGTTGGAGCAGTGCCA...GCTCAACCAAGTTTGGGGATGGTGAACCAGGAGCTGTGCTCCGGGGTGTGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR TCA 90 bp | CCTGCACACCCCGGAGCACAGCTCCTGGTTCACCATCCCCAAACTTGGTTGAGCATGGTCTTGTATGCCTaGCGGGCTGCCATGGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: PAHPGAQLLVHHPQTWLSMVLYA*RAAMVS Trigger: GCTGACCATGGCAGCCCGTCAGGCATACAAGACCAT...GCTCAACCAAGTTTGGGGATGGTGAACCAGGAGCTGTGCTCCGGGGTGTGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CCA 90 bp | AGGACTCCACCCCCGAGGAAGGGCCCTGCACACCCCGGAGCACAGCTCCTGGTTTGGTTCCTGTACAAATaGATAGTAGGTGGCCGCACA | + |
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Preference number: 4 (lower is better) Translates to: RTPPPRKGPAHPGAQLLVWFLYK*IVGGRT Trigger: TGTGCGGCCACCTACTATCCATTTGTACAGGAACCA...AACCAGGAGCTGTGCTCCGGGGTGTGCAGGGCCCTTCCTCGGGGGTGGAGTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR GCA 90 bp | CAAACTTGGTTGAGCAGCACTGTAATAGTGGGTCCTAGGCAGCCACGGTACCCAGAGGCGTGCTGCTGCTaGTGCTGCTTCTCCAGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: QTWLSSTVIVGPRQPRYPEACCC*CCFSSA Trigger: CGCGCTGGAGAAGCAGCAGCAGCAGCAGCACGCCTC...TGGGTACCGTGGCTGCCTAGGACCCACTATTACAGTGCTGCTCAACCAAGTTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR GCA 90 bp | GCTCCTGGTTCACCATCCCCAAACTTGGTTGAGCAGCACTGTAATAGTGGGTCCGCGTGCGAGGCGTGCTaGTGCTGCTGCTGCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: APGSPSPNLVEQHCNSGSACEAC*CCCCFS Trigger: GGAGAAGCAGCAGCAGCAGCAGCACGCCTCGCACGC...GGACCCACTATTACAGTGCTGCTCAACCAAGTTTGGGGATGGTGAACCAGGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CCA 90 bp | TGGCAGGACTCCACCCCCGAGGAAGGGCCCTGCACACCCCGGAGCACAGCTCCTAAGTCACATTTTCAGTaGCTGCTGCTGAATCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WQDSTPEEGPCTPRSTAPKSHFQ*LLLNLK Trigger: CTTCAGATTCAGCAGCAGCCACTGAAAATGTGACTT...AGGAGCTGTGCTCCGGGGTGTGCAGGGCCCTTCCTCGGGGGTGGAGTCCTGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CCA 90 bp | TGGTTGAGCAGCACTGTAATAGTGGGTCCTAGGCAGCCACGGTACCCAGGACCAGGATCTTGGGGAAGGTaGCACTGTCAGGGGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WLSSTVIVGPRQPRYPGPGSWGR*HCQGQA Trigger: AGCCTGCCCCTGACAGTGCCACCTTCCCCAAGATCC...TGGTCCTGGGTACCGTGGCTGCCTAGGACCCACTATTACAGTGCTGCTCAACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR TCA 90 bp | TGCACACCCCGGAGCACAGCTCCTGGTTCACCATCCCCAAACTTGGTTGAGCAGACTCTCCACATCCTGTaGGTCATCACTGGCCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: CTPRSTAPGSPSPNLVEQTLHIL*VITGHR Trigger: ACGGTGGCCAGTGATGACTCACAGGATGTGGAGAGT...CTGCTCAACCAAGTTTGGGGATGGTGAACCAGGAGCTGTGCTCCGGGGTGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CCA 90 bp | TCTGAGGCTCATCTTAGCAAATCCTTGGCAGCACAATGGCAGGACTCCACCCCCGGGTCTTCATCTGACTaGAGCGGCGTCCCCTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SEAHLSKSLAAQWQDSTPGSSSD*SGVPSH Trigger: GTGAGAGGGGACGCCGCTCCAGTCAGATGAAGACCC...GGGGGTGGAGTCCTGCCATTGTGCTGCCAAGGATTTGCTAAGATGAGCCTCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CCA 90 bp | CAAACTTGGTTGAGCAGCACTGTAATAGTGGGTCCTAGGCAGCCACGGTACCCACTTGCATGGGTGGGCTaGGAGGGGACTGAGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QTWLSSTVIVGPRQPRYPLAWVG*EGTEVQ Trigger: CTGGACCTCAGTCCCCTCCCAGCCCACCCATGCAAG...TGGGTACCGTGGCTGCCTAGGACCCACTATTACAGTGCTGCTCAACCAAGTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR GCA 90 bp | GTGCTACAACCAGGTGCTTCCTTTGCCCTGAGGCCCAGTGAATTTCCAACTCTATGCGAGGCGTGCTGCTaGTGCTGCTGCTTCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLQPGASFALRPSEFPTLCEACC*CCCFSS Trigger: GCTGGAGAAGCAGCAGCAGCAGCAGCACGCCTCGCA...TAGAGTTGGAAATTCACTGGGCCTCAGGGCAAAGGAAGCACCTGGTTGTAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR GCA 90 bp | GACTCCACCCCCGAGGAAGGGCCCTGCACACCCCGGAGCACAGCTCCTGGTTCATGCTGCATCCTCTCTTaGCGTTCTTTCAAAATTATC | + |
|
Preference number: 4 (lower is better) Translates to: DSTPEEGPCTPRSTAPGSCCILS*RSFKII Trigger: GATAATTTTGAAAGAACGGCAAGAGAGGATGCAGCA...TGAACCAGGAGCTGTGCTCCGGGGTGTGCAGGGCCCTTCCTCGGGGGTGGAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CCA 90 bp | TGCCCATCTGATGGACTCAGTGCTACAACCAGGTGCTTCCTTTGCCCTGAGGCCTGGGGGTTTGGTTACTaGCGCCACTCTCCACATCCT | + |
|
Preference number: 4 (lower is better) Translates to: CPSDGLSATTRCFLCPEAWGFGY*RHSPHP Trigger: AGGATGTGGAGAGTGGCGCCAGTAACCAAACCCCCA...GGCCTCAGGGCAAAGGAAGCACCTGGTTGTAGCACTGAGTCCATCAGATGGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CCA 90 bp | GCTCCTGGTTCACCATCCCCAAACTTGGTTGAGCAGCACTGTAATAGTGGGTCCCTTCCGTGGATGGGATaGGGTCTTGCATGGGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: APGSPSPNLVEQHCNSGSLPWMG*GLAWVG Trigger: GCCCACCCATGCAAGACCCCATCCCATCCACGGAAG...GGACCCACTATTACAGTGCTGCTCAACCAAGTTTGGGGATGGTGAACCAGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR TCA 90 bp | CAAACTTGGTTGAGCAGCACTGTAATAGTGGGTCCTAGGCAGCCACGGTACCCACTGCAGGGTTGGCACTaGGCAAACACTCTGTGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: QTWLSSTVIVGPRQPRYPLQGWH*ANTLCG Trigger: TCCGCACAGAGTGTTTGCTCAGTGCCAACCCTGCAG...TGGGTACCGTGGCTGCCTAGGACCCACTATTACAGTGCTGCTCAACCAAGTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR TCA 90 bp | GATCCATACAGTCATCATGGAAGCATGCCTTGCTGCTGTCCCTCTTTCCTACTGGTTCGAGAGGACAGGTaGCTGGACCCCCTGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: DPYSHHGSMPCCCPSFLLVREDR*LDPLAG Trigger: ACCAGCCAGGGGGTCCAGTCACCTGTCCTCTCGAAC...CAGTAGGAAAGAGGGACAGCAGCAAGGCATGCTTCCATGATGACTGTATGGATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| CDS-3UTR GCA 90 bp | TGGTTGAGCAGCACTGTAATAGTGGGTCCTAGGCAGCCACGGTACCCAGGACCAGATCCTTCTGGTACATaGGGTCTTGGAAGCGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: WLSSTVIVGPRQPRYPGPDPSGT*GLGSAP Trigger: TGGTGCGCTTCCAAGACCGCATGTACCAGAAGGATC...TGGTCCTGGGTACCGTGGCTGCCTAGGACCCACTATTACAGTGCTGCTCAACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR GCA 90 bp | TCTGAGGCTCATCTTAGCAAATCCTTGGCAGCACAATGGCAGGACTCCACCCCCAGGTCCAGGTTCTCCTaGCTGTTCCTGCCGCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: SEAHLSKSLAAQWQDSTPRSRFS*LFLPHC Trigger: ACAATGCGGCAGGAACAGGCAGGAGAACCTGGACCT...GGGGGTGGAGTCCTGCCATTGTGCTGCCAAGGATTTGCTAAGATGAGCCTCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CCA 90 bp | TGGTTGAGCAGCACTGTAATAGTGGGTCCTAGGCAGCCACGGTACCCAGGACCATTTTGCTTCCTGAGGTaGAGGGCACACGTGCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: WLSSTVIVGPRQPRYPGPFCFLR*RAHVLM Trigger: CATGAGCACGTGTGCCCTCCACCTCAGGAAGCAAAA...TGGTCCTGGGTACCGTGGCTGCCTAGGACCCACTATTACAGTGCTGCTCAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CCA 90 bp | TCAGTGCTACAACCAGGTGCTTCCTTTGCCCTGAGGCCCAGTGAATTTCCAACTGGAGAGGCATGTTACTaGCAGCAGGGCCAAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SVLQPGASFALRPSEFPTGEACY*QQGQEA Trigger: GGCCTCTTGGCCCTGCTGCCAGTAACATGCCTCTCC...AGTTGGAAATTCACTGGGCCTCAGGGCAAAGGAAGCACCTGGTTGTAGCACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CCA 90 bp | TGCCCATCTGATGGACTCAGTGCTACAACCAGGTGCTTCCTTTGCCCTGAGGCCCTCACAGCACTTTCTTaGAGTCGCTGCTGCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CPSDGLSATTRCFLCPEALTALS*SRCCIL Trigger: GAGGATGCAGCAGCGACTCCAAGAAAGTGCTGTGAG...GGCCTCAGGGCAAAGGAAGCACCTGGTTGTAGCACTGAGTCCATCAGATGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CCA 90 bp | GCTCCTGGTTCACCATCCCCAAACTTGGTTGAGCAGCACTGTAATAGTGGGTCCTCTTCTCTGGACCTGTaGGGTTGTCCTGACTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: APGSPSPNLVEQHCNSGSSSLDL*GCPDWG Trigger: CCCCCAGTCAGGACAACCCCACAGGTCCAGAGAAGA...GGACCCACTATTACAGTGCTGCTCAACCAAGTTTGGGGATGGTGAACCAGGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR GCA 90 bp | CTACAACCAGGTGCTTCCTTTGCCCTGAGGCCCAGTGAATTTCCAACTCTACAGCCCTCTGGAACTCTGTaGCAGCTGGCTCCTCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: LQPGASFALRPSEFPTLQPSGTL*QLAPLT Trigger: AGTCAGAGGAGCCAGCTGGCACAGAGTTCCAGAGGG...CTGTAGAGTTGGAAATTCACTGGGCCTCAGGGCAAAGGAAGCACCTGGTTGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR TCA 90 bp | GATCCATACAGTCATCATGGAAGCATGCCTTGCTGCTGTCCCTCTTTCCTACTGCTGCAGGGTTGGCACTaGGCAAACACTCTGTGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: DPYSHHGSMPCCCPSFLLLQGWH*ANTLCG Trigger: TCCGCACAGAGTGTTTGCTCAGTGCCAACCCTGCAG...CAGTAGGAAAGAGGGACAGCAGCAAGGCATGCTTCCATGATGACTGTATGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| CDS-3UTR TCA 90 bp | AGAACTGAGAAGGAAGTCTTTTCCTGCCTCTCCCATCCTTACCCAATACACAGAGTTCGAGAGGACAGGTaGCTGGACCCCCTGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RTEKEVFSCLSHPYPIHRVREDR*LDPLAG Trigger: ACCAGCCAGGGGGTCCAGTCACCTGTCCTCTCGAAC...TCTGTGTATTGGGTAAGGATGGGAGAGGCAGGAAAAGACTTCCTTCTCAGTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR TCA 90 bp | ACTTGGTTGAGCAGCACTGTAATAGTGGGTCCTAGGCAGCCACGGTACCCAGGATGCACTTCAGCTTCCTaGGCTTCAGGTGTTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TWLSSTVIVGPRQPRYPGCTSAS*ASGVSG Trigger: TCCTGAAACACCTGAAGCTCAGGAAGCTGAAGTGCA...TCCTGGGTACCGTGGCTGCCTAGGACCCACTATTACAGTGCTGCTCAACCAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CCA 90 bp | GTTCACCATCCCCAAACTTGGTTGAGCAGCACTGTAATAGTGGGTCCTAGGCAGAGACACGTACTGTGCTaGAAAGGTGGGGGCTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: VHHPQTWLSSTVIVGPRQRHVLC*KGGGSE Trigger: TTCGGAGCCCCCACCTTTCCAGCACAGTACGTGTCT...CTGCCTAGGACCCACTATTACAGTGCTGCTCAACCAAGTTTGGGGATGGTGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CCA 90 bp | TGCCCATCTGATGGACTCAGTGCTACAACCAGGTGCTTCCTTTGCCCTGAGGCCCGGCTTCTGTGTCTCTaGCATGTTACTGTTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CPSDGLSATTRCFLCPEARLLCL*HVTVLW Trigger: CCAAAGAACAGTAACATGCCAGAGACACAGAAGCCG...GGCCTCAGGGCAAAGGAAGCACCTGGTTGTAGCACTGAGTCCATCAGATGGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CCA 90 bp | TGCCCATCTGATGGACTCAGTGCTACAACCAGGTGCTTCCTTTGCCCTGAGGCCGTCCAAGACAACTCTTaGGTACATGAAGGGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: CPSDGLSATTRCFLCPEAVQDNS*VHEGEL Trigger: CAGTTCCCCTTCATGTACCCAAGAGTTGTCTTGGAC...GGCCTCAGGGCAAAGGAAGCACCTGGTTGTAGCACTGAGTCCATCAGATGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CCA 90 bp | GTTCACCATCCCCAAACTTGGTTGAGCAGCACTGTAATAGTGGGTCCTAGGCAGGTCCAGGGGGTTGTGTaGGGTCTTCATCTGACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VHHPQTWLSSTVIVGPRQVQGVV*GLHLTG Trigger: TCCAGTCAGATGAAGACCCCACACAACCCCCTGGAC...CTGCCTAGGACCCACTATTACAGTGCTGCTCAACCAAGTTTGGGGATGGTGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CCA 90 bp | ACTTGGTTGAGCAGCACTGTAATAGTGGGTCCTAGGCAGCCACGGTACCCAGGAAGCCCACCTTTAGACTaGGTCTTCTCACAGTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TWLSSTVIVGPRQPRYPGSPPLD*VFSQLG Trigger: TCCCAACTGTGAGAAGACCCAGTCTAAAGGTGGGCT...TCCTGGGTACCGTGGCTGCCTAGGACCCACTATTACAGTGCTGCTCAACCAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR TCA 90 bp | GGAGCTGGAAGTCCTGCTGTGGCAGCGTACAAGGGACGAAGATGTTCTCTGTCTACAGCTCCATCAGTGTaGTCGCTCTTCACCATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GAGSPAVAAYKGRRCSLSTAPSV*SLFTIL Trigger: CAAAATGGTGAAGAGCGATCACACTGATGGAGCTGT...AGACAGAGAACATCTTCGTCCCTTGTACGCTGCCACAGCAGGACTTCCAGCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| CDS-3UTR GCA 90 bp | TGCACACCCCGGAGCACAGCTCCTGGTTCACCATCCCCAAACTTGGTTGAGCAGCATTTTCTGTTCAGCTaGTGGTGGTTCCTGTACAAA | + |
|
Preference number: 4 (lower is better) Translates to: CTPRSTAPGSPSPNLVEQHFLFS*WWFLYK Trigger: TTTGTACAGGAACCACCAGCAGCTGAACAGAAAATG...CTGCTCAACCAAGTTTGGGGATGGTGAACCAGGAGCTGTGCTCCGGGGTGTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR GCA 90 bp | TGGTTGAGCAGCACTGTAATAGTGGGTCCTAGGCAGCCACGGTACCCAGGACCACTTTTGCTCTTCACATaGTCTTCTCTCATCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: WLSSTVIVGPRQPRYPGPLLLFT*SSLIRG Trigger: CCCTCTGATGAGAGAAGAGCATGTGAAGAGCAAAAG...TGGTCCTGGGTACCGTGGCTGCCTAGGACCCACTATTACAGTGCTGCTCAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR GCA 90 bp | CTACAACCAGGTGCTTCCTTTGCCCTGAGGCCCAGTGAATTTCCAACTCTACAGTCTTGGAGTCGCTGCTaGATCCTCTCTTGCCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQPGASFALRPSEFPTLQSWSRC*ILSCRS Trigger: AGAACGGCAAGAGAGGATGCAGCAGCGACTCCAAGA...CTGTAGAGTTGGAAATTCACTGGGCCTCAGGGCAAAGGAAGCACCTGGTTGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CCA 90 bp | ACTTGGTTGAGCAGCACTGTAATAGTGGGTCCTAGGCAGCCACGGTACCCAGGAACGCAACTGACAGGTTaGGGAATTCCTCTGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: TWLSSTVIVGPRQPRYPGTQLTG*GIPLHL Trigger: AAGATGCAGAGGAATTCCCCAACCTGTCAGTTGCGT...TCCTGGGTACCGTGGCTGCCTAGGACCCACTATTACAGTGCTGCTCAACCAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CCA 90 bp | GTTCACCATCCCCAAACTTGGTTGAGCAGCACTGTAATAGTGGGTCCTAGGCAGAGCTGCACTGGGACCTaGCTCTTCTTCCCACTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VHHPQTWLSSTVIVGPRQSCTGT*LFFPLV Trigger: AACAAGTGGGAAGAAGAGCCAGGTCCCAGTGCAGCT...CTGCCTAGGACCCACTATTACAGTGCTGCTCAACCAAGTTTGGGGATGGTGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR TCA 90 bp | TCTGAGGCTCATCTTAGCAAATCCTTGGCAGCACAATGGCAGGACTCCACCCCCTGGTTTGACATCAGCTaGCAACTTGATGCTATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SEAHLSKSLAAQWQDSTPWFDIS*QLDAIL Trigger: GAGGATAGCATCAAGTTGTCAGCTGATGTCAAACCA...GGGGGTGGAGTCCTGCCATTGTGCTGCCAAGGATTTGCTAAGATGAGCCTCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR TCA 90 bp | AGAACTGAGAAGGAAGTCTTTTCCTGCCTCTCCCATCCTTACCCAATACACAGAACACCTTTTGCTTCCTaGGGTGGAGGGCACACGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RTEKEVFSCLSHPYPIHRTPFAS*GGGHTC Trigger: GCACGTGTGCCCTCCACCTCAGGAAGCAAAAGGTGT...TCTGTGTATTGGGTAAGGATGGGAGAGGCAGGAAAAGACTTCCTTCTCAGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR TCA 90 bp | CAAACTTGGTTGAGCAGCACTGTAATAGTGGGTCCTAGGCAGCCACGGTACCCATTCAAGTTCATCATCTaGGAGGTTGACGCCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QTWLSSTVIVGPRQPRYPFKFII*EVDASS Trigger: ACTGGAGGCGTCAACCTCTCAGATGATGAACTTGAA...TGGGTACCGTGGCTGCCTAGGACCCACTATTACAGTGCTGCTCAACCAAGTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
||
| CDS-3UTR GCA 90 bp | TCTGAGGCTCATCTTAGCAAATCCTTGGCAGCACAATGGCAGGACTCCACCCCCCTTAAATACACCTTTTaGTTCCTGAGGTGGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SEAHLSKSLAAQWQDSTPLKYTF*FLRWRA Trigger: TGCCCTCCACCTCAGGAAGCAAAAGGTGTATTTAAG...GGGGGTGGAGTCCTGCCATTGTGCTGCCAAGGATTTGCTAAGATGAGCCTCAGA 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
||
| CDS-3UTR GCA 90 bp | GCTCCTGGTTCACCATCCCCAAACTTGGTTGAGCAGCACTGTAATAGTGGGTCCCGCTCTTCACCATTTTaGCCTCTACCATATCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: APGSPSPNLVEQHCNSGSRSSPF*PLPYLR Trigger: TCGCAGATATGGTAGAGGGCAAAATGGTGAAGAGCG...GGACCCACTATTACAGTGCTGCTCAACCAAGTTTGGGGATGGTGAACCAGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
||
| CDS-3UTR GCA 90 bp | TCAGTGCTACAACCAGGTGCTTCCTTTGCCCTGAGGCCCAGTGAATTTCCAACTGTTGGGGAATTCCTCTaGATCTTCAATCCTTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SVLQPGASFALRPSEFPTVGEFL*IFNPWR Trigger: CCGCCAAGGATTGAAGATGCAGAGGAATTCCCCAAC...AGTTGGAAATTCACTGGGCCTCAGGGCAAAGGAAGCACCTGGTTGTAGCACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
||
| CDS-3UTR CCA 90 bp | CACATAGAAGAGCTCGCTCATTTCCTGACTAACATGCCATCCTTTTCTCAAAGCGGAGAGGCATGTTACTaGCAGCAGGGCCAAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HIEELAHFLTNMPSFSQSGEACY*QQGQEA Trigger: GGCCTCTTGGCCCTGCTGCCAGTAACATGCCTCTCC...GCTTTGAGAAAAGGATGGCATGTTAGTCAGGAAATGAGCGAGCTCTTCTATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
||
| CDS-3UTR TCA 90 bp | ACTTGGTTGAGCAGCACTGTAATAGTGGGTCCTAGGCAGCCACGGTACCCAGGAAGATCCCTACAATGCTaGCAGGAACAGCTTTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: TWLSSTVIVGPRQPRYPGRSLQC*QEQLYS Trigger: TGAATAAAGCTGTTCCTGTCAGCATTGTAGGGATCT...TCCTGGGTACCGTGGCTGCCTAGGACCCACTATTACAGTGCTGCTCAACCAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
||
| CDS-3UTR GCA 90 bp | GTGCTACAACCAGGTGCTTCCTTTGCCCTGAGGCCCAGTGAATTTCCAACTCTATGTCAGCCCTTCTGCTaGTTGACTTTTGCTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VLQPGASFALRPSEFPTLCQPFC*LTFALH Trigger: GTGAAGAGCAAAAGTCAAGCAGCAGAAGGGCTGACA...TAGAGTTGGAAATTCACTGGGCCTCAGGGCAAAGGAAGCACCTGGTTGTAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
||
| CDS-3UTR GCA 90 bp | GGAGCTGGAAGTCCTGCTGTGGCAGCGTACAAGGGACGAAGATGTTCTCTGTCTCTGTTCTTTGGACTCTaGAGTTCAGGAAAGTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: GAGSPAVAAYKGRRCSLSLFFGL*SSGKSN Trigger: GTTAGACTTTCCTGAACTGCAGAGTCCAAAGAACAG...AGACAGAGAACATCTTCGTCCCTTGTACGCTGCCACAGCAGGACTTCCAGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
||
| CDS-3UTR GCA 90 bp | GTGCTACAACCAGGTGCTTCCTTTGCCCTGAGGCCCAGTGAATTTCCAACTCTAAGCCTTGCGATTGAGTaGAAACACGAAGGGGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: VLQPGASFALRPSEFPTLSLAIE*KHEGDV Trigger: AACATCCCCTTCGTGTTTGCACTCAATCGCAAGGCT...TAGAGTTGGAAATTCACTGGGCCTCAGGGCAAAGGAAGCACCTGGTTGTAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CCA 90 bp | GCTCCTGGTTCACCATCCCCAAACTTGGTTGAGCAGCACTGTAATAGTGGGTCCCTCCTTGTGATGCTTTaGCCTTTGGAGCAGGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: APGSPSPNLVEQHCNSGSLLVML*PLEQDK Trigger: TTTATCCTGCTCCAAAGGCCAAAGCATCACAAGGAG...GGACCCACTATTACAGTGCTGCTCAACCAAGTTTGGGGATGGTGAACCAGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR TCA 90 bp | TTCTCTGTCTCCGTCTCTCAGGAAACAAAAGTATCACCACTCAGCCCAGCGGCATGGTTTGACATCAGCTaGCAACTTGATGCTATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FSVSVSQETKVSPLSPAAWFDIS*QLDAIL Trigger: GAGGATAGCATCAAGTTGTCAGCTGATGTCAAACCA...TGCCGCTGGGCTGAGTGGTGATACTTTTGTTTCCTGAGAGACGGAGACAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| CDS-3UTR TCA 90 bp | GTGCTACAACCAGGTGCTTCCTTTGCCCTGAGGCCCAGTGAATTTCCAACTCTAAATTATCTTCTTCAGTaGGGTGGGCTTCTTGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VLQPGASFALRPSEFPTLNYLLQ*GGLLGL Trigger: AAGGCCAAGAAGCCCACCTCACTGAAGAAGATAATT...TAGAGTTGGAAATTCACTGGGCCTCAGGGCAAAGGAAGCACCTGGTTGTAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR TCA 90 bp | GATCCATACAGTCATCATGGAAGCATGCCTTGCTGCTGTCCCTCTTTCCTACTGGAGCCTGCCAAGTGCTaGATTACAGTTTTTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: DPYSHHGSMPCCCPSFLLEPAKC*ITVFAT Trigger: AGTGGCAAAAACTGTAATTCAGCACTTGGCAGGCTC...CAGTAGGAAAGAGGGACAGCAGCAAGGCATGCTTCCATGATGACTGTATGGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| CDS-3UTR GCA 90 bp | CTCTGTCTCCGTCTCTCAGGAAACAAAAGTATCACCACTCAGCCCAGCGGCAGTCATTTTCTGTTCAGCTaGTGGTGGTTCCTGTACAAA | + |
|
Preference number: 4 (lower is better) Translates to: LCLRLSGNKSITTQPSGSHFLFS*WWFLYK Trigger: TTTGTACAGGAACCACCAGCAGCTGAACAGAAAATG...ACTGCCGCTGGGCTGAGTGGTGATACTTTTGTTTCCTGAGAGACGGAGACAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| CDS-3UTR GCA 90 bp | TTCTCTGTCTCCGTCTCTCAGGAAACAAAAGTATCACCACTCAGCCCAGCGGCACTTAAATACACCTTTTaGTTCCTGAGGTGGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FSVSVSQETKVSPLSPAALKYTF*FLRWRA Trigger: TGCCCTCCACCTCAGGAAGCAAAAGGTGTATTTAAG...TGCCGCTGGGCTGAGTGGTGATACTTTTGTTTCCTGAGAGACGGAGACAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| CDS-3UTR GCA 90 bp | GTGCTACAACCAGGTGCTTCCTTTGCCCTGAGGCCCAGTGAATTTCCAACTCTACTGCTGCTTGACTTTTaGTCTTCACATGCTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLQPGASFALRPSEFPTLLLLDF*SSHALL Trigger: GAGAAGAGCATGTGAAGAGCAAAAGTCAAGCAGCAG...TAGAGTTGGAAATTCACTGGGCCTCAGGGCAAAGGAAGCACCTGGTTGTAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CCA 90 bp | TCAGTGCTACAACCAGGTGCTTCCTTTGCCCTGAGGCCCAGTGAATTTCCAACTTTTCTGTTCAGCTGCTaGTGGTTCCTGTACAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SVLQPGASFALRPSEFPTFLFSC*WFLYKW Trigger: CCATTTGTACAGGAACCACCAGCAGCTGAACAGAAA...AGTTGGAAATTCACTGGGCCTCAGGGCAAAGGAAGCACCTGGTTGTAGCACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CCA 90 bp | GCAGAAACTTGGAGAAGCATCTTTTCTTCAAAGCGTTCTGGAGCTGGAAGTCCTTTTTGCTTCCTGAGGTaGAGGGCACACGTGCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: AETWRSIFSSKRSGAGSPFCFLR*RAHVLM Trigger: CATGAGCACGTGTGCCCTCCACCTCAGGAAGCAAAA...AGGACTTCCAGCTCCAGAACGCTTTGAAGAAAAGATGCTTCTCCAAGTTTCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| CDS-3UTR TCA 90 bp | AGAACTGAGAAGGAAGTCTTTTCCTGCCTCTCCCATCCTTACCCAATACACAGAAGCCCTTCTGCTGCTTaGCTTTTGCTCTTCACATGC | + |
|
Preference number: 4 (lower is better) Translates to: RTEKEVFSCLSHPYPIHRSPSAA*LLLFTC Trigger: GCATGTGAAGAGCAAAAGTCAAGCAGCAGAAGGGCT...TCTGTGTATTGGGTAAGGATGGGAGAGGCAGGAAAAGACTTCCTTCTCAGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
||
| CDS-3UTR TCA 90 bp | GCTTCCTTTGCCCTGAGGCCCAGTGAATTTCCAACTCTACAGTCACATAAATACACTGTGAAGCTTCGGTaGTTGCCCTCTGTGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASFALRPSEFPTLQSHKYTVKLR*LPSVSS Trigger: AGAAGACACAGAGGGCAATCACCGAAGCTTCACAGT...GTATTTATGTGACTGTAGAGTTGGAAATTCACTGGGCCTCAGGGCAAAGGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
||
| CDS-3UTR TCA 90 bp | AGAACTGAGAAGGAAGTCTTTTCCTGCCTCTCCCATCCTTACCCAATACACAGAGTTTTGTCTTGGCCTTaGCGGGATCCTTCTGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: RTEKEVFSCLSHPYPIHRVLSWP*RDPSGT Trigger: TGTACCAGAAGGATCCCGTCAAGGCCAAGACAAAAC...TCTGTGTATTGGGTAAGGATGGGAGAGGCAGGAAAAGACTTCCTTCTCAGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR GCA 90 bp | TCAGTGCTACAACCAGGTGCTTCCTTTGCCCTGAGGCCCAGTGAATTTCCAACTCTGTTCTTTGGACTCTaGAGTTCAGGAAAGTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SVLQPGASFALRPSEFPTLFFGL*SSGKSN Trigger: GTTAGACTTTCCTGAACTGCAGAGTCCAAAGAACAG...AGTTGGAAATTCACTGGGCCTCAGGGCAAAGGAAGCACCTGGTTGTAGCACTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CCA 90 bp | CATCATGTCAGTAAAGAACTGAGAAGGAAGTCTTTTCCTGCCTCTCCCATCCTTTGCATCTTCAATCCTTaGCGGCTCCTGAACCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HHVSKELRRKSFPASPILCIFNP*RLLNRQ Trigger: CTGACGGTTCAGGAGCCGCCAAGGATTGAAGATGCA...AAGGATGGGAGAGGCAGGAAAAGACTTCCTTCTCAGTTCTTTACTGACATGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR GCA 90 bp | ATACAGTCATCATGGAAGCATGCCTTGCTGCTGTCCCTCTTTCCTACTGTGAAACGCTCTTCACCATTTTaGCCTCTACCATATCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: IQSSWKHALLLSLFPTVKRSSPF*PLPYLR Trigger: TCGCAGATATGGTAGAGGGCAAAATGGTGAAGAGCG...TTTCACAGTAGGAAAGAGGGACAGCAGCAAGGCATGCTTCCATGATGACTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| CDS-3UTR CCA 90 bp | GCAGAAACTTGGAGAAGCATCTTTTCTTCAAAGCGTTCTGGAGCTGGAAGTCCTCGGCTTCTGTGTCTCTaGCATGTTACTGTTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AETWRSIFSSKRSGAGSPRLLCL*HVTVLW Trigger: CCAAAGAACAGTAACATGCCAGAGACACAGAAGCCG...AGGACTTCCAGCTCCAGAACGCTTTGAAGAAAAGATGCTTCTCCAAGTTTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| CDS-3UTR CCA 90 bp | TCTCTCAGGAAACAAAAGTATCACCACTCAGCCCAGCGGCAGTCTTTTAAGACAGTCCAAGACAACTCTTaGGTACATGAAGGGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: SLRKQKYHHSAQRQSFKTVQDNS*VHEGEL Trigger: CAGTTCCCCTTCATGTACCCAAGAGTTGTCTTGGAC...TGTCTTAAAAGACTGCCGCTGGGCTGAGTGGTGATACTTTTGTTTCCTGAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| CDS-3UTR CCA 90 bp | CTGTCTCCGTCTCTCAGGAAACAAAAGTATCACCACTCAGCCCAGCGGCAGTCTAACAATATAACCCATTaGTGTCCAAGACAACTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSPSLRKQKYHHSAQRQSNNITH*CPRQLL Trigger: CAAGAGTTGTCTTGGACACCAATGGGTTATATTGTT...AGACTGCCGCTGGGCTGAGTGGTGATACTTTTGTTTCCTGAGAGACGGAGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| 3UTR CAA 72 bp | TTTTCTCAAAGCTCAAGTACAAAACACTCAGGCTGGTaGGTATTGGGTAGGCTGCAGCAGTCAGTAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSQSSSTKHSGW*VLGRLQQSVDG Trigger: GCCATCTACTGACTGCTGCAGCCTACCCAATACCAACCAGCCTGAGTGTTTTGTACTTGAGCTTTGAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| CDS-3UTR CCA 90 bp | TCAGTGCTACAACCAGGTGCTTCCTTTGCCCTGAGGCCCAGTGAATTTCCAACTAACAATATAACCCATTaGTGTCCAAGACAACTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SVLQPGASFALRPSEFPTNNITH*CPRQLL Trigger: CAAGAGTTGTCTTGGACACCAATGGGTTATATTGTT...AGTTGGAAATTCACTGGGCCTCAGGGCAAAGGAAGCACCTGGTTGTAGCACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CCA 90 bp | CACATAGAAGAGCTCGCTCATTTCCTGACTAACATGCCATCCTTTTCTCAAAGCCTTGACGCATACCTTTaGAGCAGGATAAACACGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HIEELAHFLTNMPSFSQSLDAYL*SRINTL Trigger: AAGCGTGTTTATCCTGCTCCAAAGGTATGCGTCAAG...GCTTTGAGAAAAGGATGGCATGTTAGTCAGGAAATGAGCGAGCTCTTCTATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| CDS-3UTR CCA 90 bp | CCAGGTAACTCTTTCTCAAGTCTGTCACCATTAACTGTACATTCTTTCCCCAACTTTCTGTTCAGCTGCTaGTGGTTCCTGTACAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: PGNSFSSLSPLTVHSFPNFLFSC*WFLYKW Trigger: CCATTTGTACAGGAACCACCAGCAGCTGAACAGAAA...GTTGGGGAAAGAATGTACAGTTAATGGTGACAGACTTGAGAAAGAGTTACCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| CDS-3UTR TCA 90 bp | AGGAAAAAGATGCATCAAATACGTATCAGAGCAGAAACTTGGAGAAGCATCTTTAGCCCTTCTGCTGCTTaGCTTTTGCTCTTCACATGC | + |
|
Preference number: 4 (lower is better) Translates to: RKKMHQIRIRAETWRSIFSPSAA*LLLFTC Trigger: GCATGTGAAGAGCAAAAGTCAAGCAGCAGAAGGGCT...AAAGATGCTTCTCCAAGTTTCTGCTCTGATACGTATTTGATGCATCTTTTTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| CDS-3UTR GCA 90 bp | AGGAAAAAGATGCATCAAATACGTATCAGAGCAGAAACTTGGAGAAGCATCTTTTGTCAGCCCTTCTGCTaGTTGACTTTTGCTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RKKMHQIRIRAETWRSIFCQPFC*LTFALH Trigger: GTGAAGAGCAAAAGTCAAGCAGCAGAAGGGCTGACA...AAAGATGCTTCTCCAAGTTTCTGCTCTGATACGTATTTGATGCATCTTTTTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| CDS-3UTR CCA 90 bp | AGGAAAAAGATGCATCAAATACGTATCAGAGCAGAAACTTGGAGAAGCATCTTTTGGTTCCTGTACAAATaGATAGTAGGTGGCCGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RKKMHQIRIRAETWRSIFWFLYK*IVGGRT Trigger: TGTGCGGCCACCTACTATCCATTTGTACAGGAACCA...AAAGATGCTTCTCCAAGTTTCTGCTCTGATACGTATTTGATGCATCTTTTTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| CDS-3UTR GCA 90 bp | AGGAAAAAGATGCATCAAATACGTATCAGAGCAGAAACTTGGAGAAGCATCTTTCTGCTGCTTGACTTTTaGTCTTCACATGCTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RKKMHQIRIRAETWRSIFLLLDF*SSHALL Trigger: GAGAAGAGCATGTGAAGAGCAAAAGTCAAGCAGCAG...AAAGATGCTTCTCCAAGTTTCTGCTCTGATACGTATTTGATGCATCTTTTTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| CDS-3UTR CCA 90 bp | CAAATACGTATCAGAGCAGAAACTTGGAGAAGCATCTTTTCTTCAAAGCGTTCTAAGTCACATTTTCAGTaGCTGCTGCTGAATCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QIRIRAETWRSIFSSKRSKSHFQ*LLLNLK Trigger: CTTCAGATTCAGCAGCAGCCACTGAAAATGTGACTT...AGAACGCTTTGAAGAAAAGATGCTTCTCCAAGTTTCTGCTCTGATACGTATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| 3UTR CAA 72 bp | GAAAAAGATGCATCAAATACGTATCAGAGCAGAAACTaGGAGAAGCATCTTTTCTTCAAAGCGTTCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: EKDASNTYQSRN*EKHLFFKAFWS Trigger: GCTCCAGAACGCTTTGAAGAAAAGATGCTTCTCCAAGTTTCTGCTCTGATACGTATTTGATGCATCTTTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| CDS CCA 90 bp | CTGGCACTGCTCCAACTGAGAACACGACGGGTCTGGAGGATGGCTTaGCGTGCGAGGCGTGCTGCTGCTGCTGCTGCTTCTCCAGCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LALLQLRTRRVWRMA*RARRAAAAAASPAR Trigger: CCGCGCTGGAGAAGCAGCAGCAGCAGCAGCACGCCTCGCACGCCAAGCCATCCTCCAGACCCGTCGTGTTCTCAGTTGGAGCAGTGCCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS CCA 90 bp | CTCCGGCTGTGGATCTTGGGGAAGGTGGCACTGTCAGGGGCAGGCTaGCAAGCCTCTGGGTCCCTCTGGAACTCTGTGCCAGCTGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LRLWILGKVALSGAG*QASGSLWNSVPAGS Trigger: GGAGCCAGCTGGCACAGAGTTCCAGAGGGACCCAGAGGCTTGCCAGCCTGCCCCTGACAGTGCCACCTTCCCCAAGATCCACAGCCGGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS CCA 90 bp | GGCTGCAGTAGTCCCGGAACCTCCGGCTGTGGATCTTGGGGAAGGTaGCACTGTCAGGGGCAGGCTGGCAAGCCTCTGGGTCCCTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GCSSPGTSGCGSWGR*HCQGQAGKPLGPSG Trigger: TCCAGAGGGACCCAGAGGCTTGCCAGCCTGCCCCTGACAGTGCCACCTTCCCCAAGATCCACAGCCGGAGGTTCCGGGACTACTGCAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CAA 90 bp | TGGCAGGACTCCACCCCCGAGGAAGGGCCCTGCACACCCCGGAGCACAGCTCCTAAGCGCACCAGCTCCTaGAGCAGACCCGTGACACAA | + |
|
Preference number: 5 (lower is better) Translates to: WQDSTPEEGPCTPRSTAPKRTSS*SRPVTQ Trigger: TTGTGTCACGGGTCTGCTCAAGGAGCTGGTGCGCTT...AGGAGCTGTGCTCCGGGGTGTGCAGGGCCCTTCCTCGGGGGTGGAGTCCTGCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS CCA 90 bp | CCTTGGACAGGACTGGCACTGCTCCAACTGAGAACACGACGGGTCTaGAGGATGGCTTGGCGTGCGAGGCGTGCTGCTGCTGCTGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PWTGLALLQLRTRRV*RMAWRARRAAAAAA Trigger: AGCAGCAGCAGCAGCAGCACGCCTCGCACGCCAAGCCATCCTCCAGACCCGTCGTGTTCTCAGTTGGAGCAGTGCCAGTCCTGTCCAAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS TCA 90 bp | CTCACTGGAGGAGGCATCCTTGGACAGGACTGGCACTGCTCCAACTaGGAACACGACGGGTCTGGAGGATGGCTTGGCGTGCGAGGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: LTGGGILGQDWHCSN*EHDGSGGWLGVRGV Trigger: CACGCCTCGCACGCCAAGCCATCCTCCAGACCCGTCGTGTTCTCAGTTGGAGCAGTGCCAGTCCTGTCCAAGGATGCCTCCTCCAGTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS TCA 90 bp | TCCGTGGATGGGATGGGGTCTTGCATGGGTGGGCTGGGAGGGGACTaGGGTCCAGGTTCTCCTGCCTGTTCCTGCCGCATTGTCTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SVDGMGSCMGGLGGD*GPGSPACSCRIVSN Trigger: GTTGGAGACAATGCGGCAGGAACAGGCAGGAGAACCTGGACCTCAGTCCCCTCCCAGCCCACCCATGCAAGACCCCATCCCATCCACGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CAA 90 bp | AGGACTCCACCCCCGAGGAAGGGCCCTGCACACCCCGGAGCACAGCTCCTGGTTGACGCAACTGACAGGTaGGGGAATTCCTCTGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: RTPPPRKGPAHPGAQLLVDATDR*GNSSAS Trigger: AGATGCAGAGGAATTCCCCAACCTGTCAGTTGCGTC...AACCAGGAGCTGTGCTCCGGGGTGTGCAGGGCCCTTCCTCGGGGGTGGAGTCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CAA 90 bp | GACTCCACCCCCGAGGAAGGGCCCTGCACACCCCGGAGCACAGCTCCTGGTTCACCTGTTCCTGCCGCATaGTCTCCAACATGGTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: DSTPEEGPCTPRSTAPGSPVPAA*SPTWSC Trigger: ACAAGACCATGTTGGAGACAATGCGGCAGGAACAGG...TGAACCAGGAGCTGTGCTCCGGGGTGTGCAGGGCCCTTCCTCGGGGGTGGAGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
||
| CDS GCA 90 bp | CGCCCCAGAGCCTTGCGATTGAGTGCAAACACGAAGGGGATGTTCTaGTCGCAGGCGCAGTCGATGATGGTGTGCAGCGTGTCGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RPRALRLSANTKGMF*SQAQSMMVCSVSSS Trigger: GCTGGACGACACGCTGCACACCATCATCGACTGCGCCTGCGAGCAGAACATCCCCTTCGTGTTTGCACTCAATCGCAAGGCTCTGGGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS CCA 90 bp | CAAACTGCTCTCAGTTCGAGAGGACAGGTGACTGGACCCCCTGGCTaGTCTCGCCTCACAGGGCACCGCATTGTCAGCCCTTCTGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QTALSSRGQVTGPPG*SRLTGHRIVSPSAA Trigger: AGCAGCAGAAGGGCTGACAATGCGGTGCCCTGTGAGGCGAGACCAGCCAGGGGGTCCAGTCACCTGTCCTCTCGAACTGAGAGCAGTTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
||
| CDS CCA 90 bp | TCATCTGACTGGAGCGGCGTCCCCTCTCACTGGAGGAGGCATCCTTaGACAGGACTGGCACTGCTCCAACTGAGAACACGACGGGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSDWSGVPSHWRRHP*TGLALLQLRTRRVW Trigger: CCAGACCCGTCGTGTTCTCAGTTGGAGCAGTGCCAGTCCTGTCCAAGGATGCCTCCTCCAGTGAGAGGGGACGCCGCTCCAGTCAGATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
||
| CDS CCA 90 bp | GGTTGTGTGGGGTCTTCATCTGACTGGAGCGGCGTCCCCTCTCACTaGAGGAGGCATCCTTGGACAGGACTGGCACTGCTCCAACTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GCVGSSSDWSGVPSH*RRHPWTGLALLQLR Trigger: TCTCAGTTGGAGCAGTGCCAGTCCTGTCCAAGGATGCCTCCTCCAGTGAGAGGGGACGCCGCTCCAGTCAGATGAAGACCCCACACAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CAA 90 bp | TGGCAGGACTCCACCCCCGAGGAAGGGCCCTGCACACCCCGGAGCACAGCTCCTGCATGTTACTGTTCTTaGGACTCTGCAGTTCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: WQDSTPEEGPCTPRSTAPACYCS*DSAVQE Trigger: TTCCTGAACTGCAGAGTCCAAAGAACAGTAACATGC...AGGAGCTGTGCTCCGGGGTGTGCAGGGCCCTTCCTCGGGGGTGGAGTCCTGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
||
| CDS GCA 90 bp | TTTTGCTTCCTGAGGTGGAGGGCACACGTGCTCATGCCGGGGCTTTaGTGTCCGAAAGCCTGGGTGACACCGTGCTTGGCTGTAGTCGTA | + |
|
Preference number: 5 (lower is better) Translates to: FCFLRWRAHVLMPGL*CPKAWVTPCLAVVV Trigger: TACGACTACAGCCAAGCACGGTGTCACCCAGGCTTTCGGACAGCAAAGCCCCGGCATGAGCACGTGTGCCCTCCACCTCAGGAAGCAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
||
| CDS GCA 90 bp | GTCTTGCATGGGTGGGCTGGGAGGGGACTGAGGTCCAGGTTCTCCTaGCTGTTCCTGCCGCATTGTCTCCAACATGGTCTTGTATGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VLHGWAGRGLRSRFS*LFLPHCLQHGLVCL Trigger: CAGGCATACAAGACCATGTTGGAGACAATGCGGCAGGAACAGGCAGGAGAACCTGGACCTCAGTCCCCTCCCAGCCCACCCATGCAAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
||
| CDS CCA 90 bp | ATTTCAAACTGCTCTCAGTTCGAGAGGACAGGTGACTGGACCCCCTaGCTGGTCTCGCCTCACAGGGCACCGCATTGTCAGCCCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ISNCSQFERTGDWTP*LVSPHRAPHCQPFC Trigger: GCAGAAGGGCTGACAATGCGGTGCCCTGTGAGGCGAGACCAGCCAGGGGGTCCAGTCACCTGTCCTCTCGAACTGAGAGCAGTTTGAAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
||
| CDS-3UTR CAA 90 bp | TGGTTGAGCAGCACTGTAATAGTGGGTCCTAGGCAGCCACGGTACCCAGGACCACTGGAGGAGGCATCCTaGGACAGGACTGGCACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: WLSSTVIVGPRQPRYPGPLEEAS*DRTGTA Trigger: AGCAGTGCCAGTCCTGTCCAAGGATGCCTCCTCCAG...TGGTCCTGGGTACCGTGGCTGCCTAGGACCCACTATTACAGTGCTGCTCAACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS GCA 90 bp | AACACGAAGGGGATGTTCTGCTCGCAGGCGCAGTCGATGATGGTGTaGAGCGTGTCGTCCAGCCCACCTTTAGACTGGGTCTTCTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: NTKGMFCSQAQSMMV*SVSSSPPLDWVFSQ Trigger: CTGTGAGAAGACCCAGTCTAAAGGTGGGCTGGACGACACGCTGCACACCATCATCGACTGCGCCTGCGAGCAGAACATCCCCTTCGTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS GCA 90 bp | TTCCTGCCGCATTGTCTCCAACATGGTCTTGTATGCCTGACGGGCTaGCATGGTCAGCTCAACCATCTTGTGGAACTGGTCCTGGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: FLPHCLQHGLVCLTG*HGQLNHLVELVLGP Trigger: GGGGCCCAGGACCAGTTCCACAAGATGGTTGAGCTGACCATGGCAGCCCGTCAGGCATACAAGACCATGTTGGAGACAATGCGGCAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS CCA 90 bp | GGGTTTGGTTACTGGCGCCACTCTCCACATCCTGTGAGTCATCACTaGCCACCGTCAGGCTCACAGCACTTTCTTGGAGTCGCTGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GFGYWRHSPHPVSHH*PPSGSQHFLGVAAA Trigger: TGCAGCAGCGACTCCAAGAAAGTGCTGTGAGCCTGACGGTGGCCAGTGATGACTCACAGGATGTGGAGAGTGGCGCCAGTAACCAAACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CAA 90 bp | CCCCCGAGGAAGGGCCCTGCACACCCCGGAGCACAGCTCCTGGTTCACCATCCCGAACAATATAACCCATaGGTGTCCAAGACAACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PPRKGPAHPGAQLLVHHPEQYNP*VSKTTL Trigger: AAGAGTTGTCTTGGACACCAATGGGTTATATTGTTC...GGGATGGTGAACCAGGAGCTGTGCTCCGGGGTGTGCAGGGCCCTTCCTCGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS TCA 90 bp | CCTGCCTGTTCCTGCCGCATTGTCTCCAACATGGTCTTGTATGCCTaGCGGGCTGCCATGGTCAGCTCAACCATCTTGTGGAACTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PACSCRIVSNMVLYA*RAAMVSSTILWNWS Trigger: GGACCAGTTCCACAAGATGGTTGAGCTGACCATGGCAGCCCGTCAGGCATACAAGACCATGTTGGAGACAATGCGGCAGGAACAGGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS GCA 90 bp | CCCTGGCTGGTCTCGCCTCACAGGGCACCGCATTGTCAGCCCTTCTaGTGCTTGACTTTTGCTCTTCACATGCTCTTCTCTCATCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PWLVSPHRAPHCQPF*CLTFALHMLFSHQR Trigger: CCTCTGATGAGAGAAGAGCATGTGAAGAGCAAAAGTCAAGCAGCAGAAGGGCTGACAATGCGGTGCCCTGTGAGGCGAGACCAGCCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
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| CDS CCA 90 bp | AACCATCAGATTTCAAACTGCTCTCAGTTCGAGAGGACAGGTGACTaGACCCCCTGGCTGGTCTCGCCTCACAGGGCACCGCATTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: NHQISNCSQFERTGD*TPWLVSPHRAPHCQ Trigger: CTGACAATGCGGTGCCCTGTGAGGCGAGACCAGCCAGGGGGTCCAGTCACCTGTCCTCTCGAACTGAGAGCAGTTTGAAATCTGATGGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
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| CDS CCA 90 bp | GAGGTCCAGGTTCTCCTGCCTGTTCCTGCCGCATTGTCTCCAACATaGTCTTGTATGCCTGACGGGCTGCCATGGTCAGCTCAACCATCT | + |
|
Preference number: 5 (lower is better) Translates to: EVQVLLPVPAALSPT*SCMPDGLPWSAQPS Trigger: AGATGGTTGAGCTGACCATGGCAGCCCGTCAGGCATACAAGACCATGTTGGAGACAATGCGGCAGGAACAGGCAGGAGAACCTGGACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CAA 90 bp | GCTCCTGGTTCACCATCCCCAAACTTGGTTGAGCAGCACTGTAATAGTGGGTCCCTCCGCCCCAGAGCCTaGCGATTGAGTGCAAACACG | + |
|
Preference number: 5 (lower is better) Translates to: APGSPSPNLVEQHCNSGSLRPRA*RLSANT Trigger: CGTGTTTGCACTCAATCGCAAGGCTCTGGGGCGGAG...GGACCCACTATTACAGTGCTGCTCAACCAAGTTTGGGGATGGTGAACCAGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CAA 90 bp | ACTTGGTTGAGCAGCACTGTAATAGTGGGTCCTAGGCAGCCACGGTACCCAGGAGTCAGCTCAACCATCTaGTGGAACTGGTCCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TWLSSTVIVGPRQPRYPGVSSTI*WNWSWA Trigger: GGCCCAGGACCAGTTCCACAAGATGGTTGAGCTGAC...TCCTGGGTACCGTGGCTGCCTAGGACCCACTATTACAGTGCTGCTCAACCAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS GCA 90 bp | AGGAACAGCTTTATTCAGGCTCCGCCCCAGAGCCTTGCGATTGAGTaGAAACACGAAGGGGATGTTCTGCTCGCAGGCGCAGTCGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: RNSFIQAPPQSLAIE*KHEGDVLLAGAVDD Trigger: ATCATCGACTGCGCCTGCGAGCAGAACATCCCCTTCGTGTTTGCACTCAATCGCAAGGCTCTGGGGCGGAGCCTGAATAAAGCTGTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS CCA 90 bp | CGTTTTGTCTTGGCCTTGACGGGATCCTTCTGGTACATGCGGTCTTaGAAGCGCACCAGCTCCTTGAGCAGACCCGTGACACAAGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: RFVLALTGSFWYMRS*KRTSSLSRPVTQAS Trigger: AGATGCTTGTGTCACGGGTCTGCTCAAGGAGCTGGTGCGCTTCCAAGACCGCATGTACCAGAAGGATCCCGTCAAGGCCAAGACAAAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS GCA 90 bp | TGGCTGGTCTCGCCTCACAGGGCACCGCATTGTCAGCCCTTCTGCTaGTTGACTTTTGCTCTTCACATGCTCTTCTCTCATCAGAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: WLVSPHRAPHCQPFC*LTFALHMLFSHQRV Trigger: AACCCTCTGATGAGAGAAGAGCATGTGAAGAGCAAAAGTCAAGCAGCAGAAGGGCTGACAATGCGGTGCCCTGTGAGGCGAGACCAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
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| CDS GCA 90 bp | TTCTCCTGCCTGTTCCTGCCGCATTGTCTCCAACATGGTCTTGTATaGCTGACGGGCTGCCATGGTCAGCTCAACCATCTTGTGGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: FSCLFLPHCLQHGLV*LTGCHGQLNHLVEL Trigger: CAGTTCCACAAGATGGTTGAGCTGACCATGGCAGCCCGTCAGGCATACAAGACCATGTTGGAGACAATGCGGCAGGAACAGGCAGGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS CCA 90 bp | TCGGTGATTGCCCTCTGTGTCTTCTTTCCGACGCAACTGACAGGTTaGGGAATTCCTCTGCATCTTCAATCCTTGGCGGCTCCTGAACCG | + |
|
Preference number: 5 (lower is better) Translates to: SVIALCVFFPTQLTG*GIPLHLQSLAAPEP Trigger: CGGTTCAGGAGCCGCCAAGGATTGAAGATGCAGAGGAATTCCCCAACCTGTCAGTTGCGTCGGAAAGAAGACACAGAGGGCAATCACCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CAA 90 bp | AGGACGGTGCCCAGGGGGCTACAGCAGATCCATACAGTCATCATGGAAGCATGCGCTGAATTACAGTTTTaGCCACTACACCCAGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: RTVPRGLQQIHTVIMEACAELQF*PLHPDP Trigger: GGGGTCTGGGTGTAGTGGCAAAAACTGTAATTCAGC...GCATGCTTCCATGATGACTGTATGGATCTGCTGTAGCCCCCTGGGCACCGTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| CDS-3UTR CAA 90 bp | AGGAAGGACGGTGCCCAGGGGGCTACAGCAGATCCATACAGTCATCATGGAAGCTGGCCCAGGATAGCCTaGGATTTACAATCCTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RKDGAQGATADPYSHHGSWPRIA*DLQSSC Trigger: ACAGGAGGATTGTAAATCCAAGGCTATCCTGGGCCA...GCTTCCATGATGACTGTATGGATCTGCTGTAGCCCCCTGGGCACCGTCCTTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| CDS GCA 90 bp | CATTACTGGTCACAGCTCCATCAGTGTGATCGCTCTTCACCATTTTaGCCTCTACCATATCTGCGACGGGCTTGCCGACGTCTCCTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: HYWSQLHQCDRSSPF*PLPYLRRACRRLLG Trigger: TCCTAGGAGACGTCGGCAAGCCCGTCGCAGATATGGTAGAGGGCAAAATGGTGAAGAGCGATCACACTGATGGAGCTGTGACCAGTAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
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| CDS CCA 90 bp | TTTTCTGTTCAGCTGCTGGTGGTTCCTGTACAAATGGATAGTAGGTaGCCGCACAGCCTGGGAAGACACGTGTCTCTGAGGACTCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: FSVQLLVVPVQMDSR*PHSLGRHVSLRTLT Trigger: GGTCAGAGTCCTCAGAGACACGTGTCTTCCCAGGCTGTGCGGCCACCTACTATCCATTTGTACAGGAACCACCAGCAGCTGAACAGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
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| CDS CCA 90 bp | GGCTCCGAAAGCCATGTCTTCGGGATACATTTTCTGTTCAGCTGCTaGTGGTTCCTGTACAAATGGATAGTAGGTGGCCGCACAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GSESHVFGIHFLFSC*WFLYKWIVGGRTAW Trigger: CCAGGCTGTGCGGCCACCTACTATCCATTTGTACAGGAACCACCAGCAGCTGAACAGAAAATGTATCCCGAAGACATGGCTTTCGGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
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| CDS-3UTR CAA 90 bp | GGAGCTGGAAGTCCTGCTGTGGCAGCGTACAAGGGACGAAGATGTTCTCTGTCTCAGCCCTTCTGCTGCTaGACTTTTGCTCTTCACATG | + |
|
Preference number: 5 (lower is better) Translates to: GAGSPAVAAYKGRRCSLSQPFCC*TFALHM Trigger: CATGTGAAGAGCAAAAGTCAAGCAGCAGAAGGGCTG...AGACAGAGAACATCTTCGTCCCTTGTACGCTGCCACAGCAGGACTTCCAGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| CDS-3UTR CAA 90 bp | GTGCTACAACCAGGTGCTTCCTTTGCCCTGAGGCCCAGTGAATTTCCAACTCTAGCTCACAGCACTTTCTaGGAGTCGCTGCTGCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: VLQPGASFALRPSEFPTLAHSTF*ESLLHP Trigger: AGGATGCAGCAGCGACTCCAAGAAAGTGCTGTGAGC...TAGAGTTGGAAATTCACTGGGCCTCAGGGCAAAGGAAGCACCTGGTTGTAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CAA 90 bp | CATCATGTCAGTAAAGAACTGAGAAGGAAGTCTTTTCCTGCCTCTCCCATCCTTGGATGGGATGGGGTCTaGCATGGGTGGGCTGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: HHVSKELRRKSFPASPILGWDGV*HGWAGR Trigger: CCTCCCAGCCCACCCATGCAAGACCCCATCCCATCC...AAGGATGGGAGAGGCAGGAAAAGACTTCCTTCTCAGTTCTTTACTGACATGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CAA 90 bp | AGAACTGAGAAGGAAGTCTTTTCCTGCCTCTCCCATCCTTACCCAATACACAGAGTCCTGACTGGGGGTTaGGTTACTGGCGCCACTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RTEKEVFSCLSHPYPIHRVLTGG*VTGATL Trigger: GAGAGTGGCGCCAGTAACCAAACCCCCAGTCAGGAC...TCTGTGTATTGGGTAAGGATGGGAGAGGCAGGAAAAGACTTCCTTCTCAGTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CAA 90 bp | GTTCACCATCCCCAAACTTGGTTGAGCAGCACTGTAATAGTGGGTCCTAGGCAGTCGCTCTTCACCATTTaGCCCTCTACCATATCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: VHHPQTWLSSTVIVGPRQSLFTI*PSTISA Trigger: CGCAGATATGGTAGAGGGCAAAATGGTGAAGAGCGA...CTGCCTAGGACCCACTATTACAGTGCTGCTCAACCAAGTTTGGGGATGGTGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CAA 90 bp | TGGTTGAGCAGCACTGTAATAGTGGGTCCTAGGCAGCCACGGTACCCAGGACCATTTGGAGCTTTCGTTTaGTTCAAGTTCACCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: WLSSTVIVGPRQPRYPGPFGAFV*FKFTSL Trigger: CAAGGAGGTGAACTTGAACAAAACGAAAGCTCCAAA...TGGTCCTGGGTACCGTGGCTGCCTAGGACCCACTATTACAGTGCTGCTCAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CAA 90 bp | GTTCACCATCCCCAAACTTGGTTGAGCAGCACTGTAATAGTGGGTCCTAGGCAGTGGGTCTTCTCACAGTaGGGAGAGATGATGATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VHHPQTWLSSTVIVGPRQWVFSQ*GEMMMH Trigger: GTGCATCATCATCTCTCCCAACTGTGAGAAGACCCA...CTGCCTAGGACCCACTATTACAGTGCTGCTCAACCAAGTTTGGGGATGGTGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS TCA 90 bp | CCGAACAATATAACCCATTGGTGTCCAAGACAACTCTTGGGTACATaGAGGGGAACTGGTAGTGGCATTACTGGTCACAGCTCCATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PNNITHWCPRQLLGT*RGTGSGITGHSSIS Trigger: ACTGATGGAGCTGTGACCAGTAATGCCACTACCAGTTCCCCTTCATGTACCCAAGAGTTGTCTTGGACACCAATGGGTTATATTGTTCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
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| CDS-3UTR CAA 90 bp | GCTTCCTTTGCCCTGAGGCCCAGTGAATTTCCAACTCTACAGTCACATAAATACCAGCCCTTCTGCTGCTaGACTTTTGCTCTTCACATG | + |
|
Preference number: 5 (lower is better) Translates to: ASFALRPSEFPTLQSHKYQPFCC*TFALHM Trigger: CATGTGAAGAGCAAAAGTCAAGCAGCAGAAGGGCTG...GTATTTATGTGACTGTAGAGTTGGAAATTCACTGGGCCTCAGGGCAAAGGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CAA 90 bp | GTTCACCATCCCCAAACTTGGTTGAGCAGCACTGTAATAGTGGGTCCTAGGCAGCTGCTGCATCCTCTCTaGCCGTTCTTTCAAAATTAT | + |
|
Preference number: 5 (lower is better) Translates to: VHHPQTWLSSTVIVGPRQLLHPL*PFFQNY Trigger: ATAATTTTGAAAGAACGGCAAGAGAGGATGCAGCAG...CTGCCTAGGACCCACTATTACAGTGCTGCTCAACCAAGTTTGGGGATGGTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CAA 90 bp | TCTCTCAGGAAACAAAAGTATCACCACTCAGCCCAGCGGCAGTCTTTTAAGACACTTGATCTAGGATCCTaGACGCATACCTTTGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SLRKQKYHHSAQRQSFKTLDLGS*THTFGA Trigger: TGCTCCAAAGGTATGCGTCAAGGATCCTAGATCAAG...TGTCTTAAAAGACTGCCGCTGGGCTGAGTGGTGATACTTTTGTTTCCTGAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| CDS TCA 90 bp | TTCTTCCCACTTGTTTTAAATTCATTCTGCGTCTGCTGTTTACTGTaGAGCTTCGGTGATTGCCCTCTGTGTCTTCTTTCCGACGCAACT | + |
|
Preference number: 5 (lower is better) Translates to: FFPLVLNSFCVCCLL*SFGDCPLCLLSDAT Trigger: AGTTGCGTCGGAAAGAAGACACAGAGGGCAATCACCGAAGCTTCACAGTAAACAGCAGACGCAGAATGAATTTAAAACAAGTGGGAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS-3UTR CAA 90 bp | CACATAGAAGAGCTCGCTCATTTCCTGACTAACATGCCATCCTTTTCTCAAAGCGCATGTTACTGTTCTTaGGACTCTGCAGTTCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: HIEELAHFLTNMPSFSQSACYCS*DSAVQE Trigger: TTCCTGAACTGCAGAGTCCAAAGAACAGTAACATGC...GCTTTGAGAAAAGGATGGCATGTTAGTCAGGAAATGAGCGAGCTCTTCTATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| CDS-3UTR CAA 90 bp | TCTCTCAGGAAACAAAAGTATCACCACTCAGCCCAGCGGCAGTCTTTTAAGACAGAACAATATAACCCATaGGTGTCCAAGACAACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SLRKQKYHHSAQRQSFKTEQYNP*VSKTTL Trigger: AAGAGTTGTCTTGGACACCAATGGGTTATATTGTTC...TGTCTTAAAAGACTGCCGCTGGGCTGAGTGGTGATACTTTTGTTTCCTGAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
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| CDS CCA 72 bp | CTGTCAGGGGCAGGCTGGCAAGCCTCTGGGTCCCTCTaGAACTCTGTGCCAGCTGGCTCCTCTGACTCACCC | + |
|
Preference number: 6 (lower is better) Translates to: LSGAGWQASGSL*NSVPAGSSDSP Trigger: GGGTGAGTCAGAGGAGCCAGCTGGCACAGAGTTCCAGAGGGACCCAGAGGCTTGCCAGCCTGCCCCTGACAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS CCA 72 bp | AGTCCCGGAACCTCCGGCTGTGGATCTTGGGGAAGGTaGCACTGTCAGGGGCAGGCTGGCAAGCCTCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: SPGTSGCGSWGR*HCQGQAGKPLG Trigger: ACCCAGAGGCTTGCCAGCCTGCCCCTGACAGTGCCACCTTCCCCAAGATCCACAGCCGGAGGTTCCGGGACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS CCA 72 bp | GGCTGCAGTAGTCCCGGAACCTCCGGCTGTGGATCTTaGGGAAGGTGGCACTGTCAGGGGCAGGCTGGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: GCSSPGTSGCGS*GRWHCQGQAGK Trigger: CTTGCCAGCCTGCCCCTGACAGTGCCACCTTCCCCAAGATCCACAGCCGGAGGTTCCGGGACTACTGCAGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS CAA 72 bp | CCTGAGGTGGAGGGCACACGTGCTCATGCCGGGGCTTaGCTGTCCGAAAGCCTGGGTGACACCGTGCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PEVEGTRAHAGA*LSESLGDTVLG Trigger: GCCAAGCACGGTGTCACCCAGGCTTTCGGACAGCAAAGCCCCGGCATGAGCACGTGTGCCCTCCACCTCAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
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| CDS TCA 72 bp | GGGATGGGGTCTTGCATGGGTGGGCTGGGAGGGGACTaGGGTCCAGGTTCTCCTGCCTGTTCCTGCCGCATT | + |
|
Preference number: 6 (lower is better) Translates to: GMGSCMGGLGGD*GPGSPACSCRI Trigger: AATGCGGCAGGAACAGGCAGGAGAACCTGGACCTCAGTCCCCTCCCAGCCCACCCATGCAAGACCCCATCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS GCA 72 bp | CTGAGGTGGAGGGCACACGTGCTCATGCCGGGGCTTTaGTGTCCGAAAGCCTGGGTGACACCGTGCTTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LRWRAHVLMPGL*CPKAWVTPCLA Trigger: AGCCAAGCACGGTGTCACCCAGGCTTTCGGACAGCAAAGCCCCGGCATGAGCACGTGTGCCCTCCACCTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
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| CDS CCA 72 bp | GGACTGGCACTGCTCCAACTGAGAACACGACGGGTCTaGAGGATGGCTTGGCGTGCGAGGCGTGCTGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GLALLQLRTRRV*RMAWRARRAAA Trigger: AGCAGCAGCACGCCTCGCACGCCAAGCCATCCTCCAGACCCGTCGTGTTCTCAGTTGGAGCAGTGCCAGTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS GCA 72 bp | CAGGCTGGCAAGCCTCTGGGTCCCTCTGGAACTCTGTaGCAGCTGGCTCCTCTGACTCACCCTCAACCACAG | + |
|
Preference number: 6 (lower is better) Translates to: QAGKPLGPSGTL*QLAPLTHPQPQ Trigger: CTGTGGTTGAGGGTGAGTCAGAGGAGCCAGCTGGCACAGAGTTCCAGAGGGACCCAGAGGCTTGCCAGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
||
| CDS CCA 72 bp | TGCTCTCAGTTCGAGAGGACAGGTGACTGGACCCCCTaGCTGGTCTCGCCTCACAGGGCACCGCATTGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: CSQFERTGDWTP*LVSPHRAPHCQ Trigger: CTGACAATGCGGTGCCCTGTGAGGCGAGACCAGCCAGGGGGTCCAGTCACCTGTCCTCTCGAACTGAGAGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
||
| CDS CCA 72 bp | TTCTCCAGTGGAAGGGAGGGTGCCTTCTTCCGTGGATaGGATGGGGTCTTGCATGGGTGGGCTGGGAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: FSSGREGAFFRG*DGVLHGWAGRG Trigger: TCCCCTCCCAGCCCACCCATGCAAGACCCCATCCCATCCACGGAAGAAGGCACCCTCCCTTCCACTGGAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
||
| CDS CCA 72 bp | GCTCTTCTCCAGTGGAAGGGAGGGTGCCTTCTTCCGTaGATGGGATGGGGTCTTGCATGGGTGGGCTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ALLQWKGGCLLP*MGWGLAWVGWE Trigger: CTCCCAGCCCACCCATGCAAGACCCCATCCCATCCACGGAAGAAGGCACCCTCCCTTCCACTGGAGAAGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS GCA 72 bp | GGGATGTTCTGCTCGCAGGCGCAGTCGATGATGGTGTaGAGCGTGTCGTCCAGCCCACCTTTAGACTGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GMFCSQAQSMMV*SVSSSPPLDWV Trigger: GACCCAGTCTAAAGGTGGGCTGGACGACACGCTGCACACCATCATCGACTGCGCCTGCGAGCAGAACATCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS GCA 72 bp | GGGTGGGCTGGGAGGGGACTGAGGTCCAGGTTCTCCTaGCTGTTCCTGCCGCATTGTCTCCAACATGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GWAGRGLRSRFS*LFLPHCLQHGL Trigger: AAGACCATGTTGGAGACAATGCGGCAGGAACAGGCAGGAGAACCTGGACCTCAGTCCCCTCCCAGCCCACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
||
| CDS CCA 72 bp | TGGAGCGGCGTCCCCTCTCACTGGAGGAGGCATCCTTaGACAGGACTGGCACTGCTCCAACTGAGAACACGA | + |
|
Preference number: 6 (lower is better) Translates to: WSGVPSHWRRHP*TGLALLQLRTR Trigger: TCGTGTTCTCAGTTGGAGCAGTGCCAGTCCTGTCCAAGGATGCCTCCTCCAGTGAGAGGGGACGCCGCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS CAA 90 bp | CTTTTGCTTCCTGAGGTGGAGGGCACACGTGCTCATGCCGGGGCTTaGCTGTCCGAAAGCCTGGGTGACACCGTGCTTGGCTGTAGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: LLLPEVEGTRAHAGA*LSESLGDTVLGCSR Trigger: ACGACTACAGCCAAGCACGGTGTCACCCAGGCTTTCGGACAGCAAAGCCCCGGCATGAGCACGTGTGCCCTCCACCTCAGGAAGCAAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
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| CDS TCA 72 bp | GGGGGTTTGGTTACTGGCGCCACTCTCCACATCCTGTaGGTCATCACTGGCCACCGTCAGGCTCACAGCACT | + |
|
Preference number: 6 (lower is better) Translates to: GGLVTGATLHIL*VITGHRQAHST Trigger: AGTGCTGTGAGCCTGACGGTGGCCAGTGATGACTCACAGGATGTGGAGAGTGGCGCCAGTAACCAAACCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
||
| CDS CCA 72 bp | ATTTCAAACTGCTCTCAGTTCGAGAGGACAGGTGACTaGACCCCCTGGCTGGTCTCGCCTCACAGGGCACCG | + |
|
Preference number: 6 (lower is better) Translates to: ISNCSQFERTGD*TPWLVSPHRAP Trigger: CGGTGCCCTGTGAGGCGAGACCAGCCAGGGGGTCCAGTCACCTGTCCTCTCGAACTGAGAGCAGTTTGAAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
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| CDS CAA 72 bp | GACCCCCTGGCTGGTCTCGCCTCACAGGGCACCGCATaGTCAGCCCTTCTGCTGCTTGACTTTTGCTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: DPLAGLASQGTA*SALLLLDFCSS Trigger: TGAAGAGCAAAAGTCAAGCAGCAGAAGGGCTGACAATGCGGTGCCCTGTGAGGCGAGACCAGCCAGGGGGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
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| CDS CAA 72 bp | CTTGGCCTTGACGGGATCCTTCTGGTACATGCGGTCTaGGAAGCGCACCAGCTCCTTGAGCAGACCCGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: LGLDGILLVHAV*EAHQLLEQTRD Trigger: GTCACGGGTCTGCTCAAGGAGCTGGTGCGCTTCCAAGACCGCATGTACCAGAAGGATCCCGTCAAGGCCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
||
| CDS CAA 90 bp | TGGGAGGGGACTGAGGTCCAGGTTCTCCTGCCTGTTCCTGCCGCATaGTCTCCAACATGGTCTTGTATGCCTGACGGGCTGCCATGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: WEGTEVQVLLPVPAA*SPTWSCMPDGLPWS Trigger: TGACCATGGCAGCCCGTCAGGCATACAAGACCATGTTGGAGACAATGCGGCAGGAACAGGCAGGAGAACCTGGACCTCAGTCCCCTCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
||
| CDS CAA 90 bp | CTGACAGGAACAGCTTTATTCAGGCTCCGCCCCAGAGCCTTGCGATaGAGTGCAAACACGAAGGGGATGTTCTGCTCGCAGGCGCAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: LTGTALFRLRPRALR*SANTKGMFCSQAQS Trigger: CGACTGCGCCTGCGAGCAGAACATCCCCTTCGTGTTTGCACTCAATCGCAAGGCTCTGGGGCGGAGCCTGAATAAAGCTGTTCCTGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
||
| CDS TCA 72 bp | TCAGATTTCAAACTGCTCTCAGTTCGAGAGGACAGGTaGCTGGACCCCCTGGCTGGTCTCGCCTCACAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SDFKLLSVREDR*LDPLAGLASQG Trigger: GCCCTGTGAGGCGAGACCAGCCAGGGGGTCCAGTCACCTGTCCTCTCGAACTGAGAGCAGTTTGAAATCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
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| CDS CCA 72 bp | GCCAAGAGGCCCCCACCTGGGCGGCTTCTGTGTCTCTaGCATGTTACTGTTCTTTGGACTCTGCAGTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: AKRPPPGRLLCL*HVTVLWTLQFR Trigger: CCTGAACTGCAGAGTCCAAAGAACAGTAACATGCCAGAGACACAGAAGCCGCCCAGGTGGGGGCCTCTTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
||
| CDS CCA 72 bp | TTGGCCTTGACGGGATCCTTCTGGTACATGCGGTCTTaGAAGCGCACCAGCTCCTTGAGCAGACCCGTGACA | + |
|
Preference number: 6 (lower is better) Translates to: LALTGSFWYMRS*KRTSSLSRPVT Trigger: TGTCACGGGTCTGCTCAAGGAGCTGGTGCGCTTCCAAGACCGCATGTACCAGAAGGATCCCGTCAAGGCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
||
| CDS CAA 90 bp | CCGTTTTGTCTTGGCCTTGACGGGATCCTTCTGGTACATGCGGTCTaGGAAGCGCACCAGCTCCTTGAGCAGACCCGTGACACAAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: PFCLGLDGILLVHAV*EAHQLLEQTRDTSI Trigger: GATGCTTGTGTCACGGGTCTGCTCAAGGAGCTGGTGCGCTTCCAAGACCGCATGTACCAGAAGGATCCCGTCAAGGCCAAGACAAAACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
||
| CDS TCA 72 bp | CAGCTTTATTCAGGCTCCGCCCCAGAGCCTTGCGATTaGGTGCAAACACGAAGGGGATGTTCTGCTCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QLYSGSAPEPCD*VQTRRGCSARR Trigger: CCTGCGAGCAGAACATCCCCTTCGTGTTTGCACTCAATCGCAAGGCTCTGGGGCGGAGCCTGAATAAAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
||
| CDS GCA 72 bp | TTTATTCAGGCTCCGCCCCAGAGCCTTGCGATTGAGTaGAAACACGAAGGGGATGTTCTGCTCGCAGGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: FIQAPPQSLAIE*KHEGDVLLAGA Trigger: TGCGCCTGCGAGCAGAACATCCCCTTCGTGTTTGCACTCAATCGCAAGGCTCTGGGGCGGAGCCTGAATAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
||
| CDS CCA 72 bp | CAGCTGCTGGTGGTTCCTGTACAAATGGATAGTAGGTaGCCGCACAGCCTGGGAAGACACGTGTCTCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: QLLVVPVQMDSR*PHSLGRHVSLR Trigger: CCTCAGAGACACGTGTCTTCCCAGGCTGTGCGGCCACCTACTATCCATTTGTACAGGAACCACCAGCAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
||
| CDS CCA 72 bp | AGGATGCAGCGCTATCTCAGAAGACACGTACTGTGCTaGAAAGGTGGGGGCTCCGAAAGCCATGTCTTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: RMQRYLRRHVLC*KGGGSESHVFG Trigger: CCCGAAGACATGGCTTTCGGAGCCCCCACCTTTCCAGCACAGTACGTGTCTTCTGAGATAGCGCTGCATCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
||
| CDS CCA 72 bp | TACTGGCGCCACTCTCCACATCCTGTGAGTCATCACTaGCCACCGTCAGGCTCACAGCACTTTCTTGGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: YWRHSPHPVSHH*PPSGSQHFLGV Trigger: GACTCCAAGAAAGTGCTGTGAGCCTGACGGTGGCCAGTGATGACTCACAGGATGTGGAGAGTGGCGCCAGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
||
| CDS CCA 72 bp | CTTCTGTCTTCTCTGGACCTGTGGGGTTGTCCTGACTaGGGGTTTGGTTACTGGCGCCACTCTCCACATCCT | + |
|
Preference number: 6 (lower is better) Translates to: LLSSLDLWGCPD*GFGYWRHSPHP Trigger: AGGATGTGGAGAGTGGCGCCAGTAACCAAACCCCCAGTCAGGACAACCCCACAGGTCCAGAGAAGACAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS CCA 72 bp | GTTCTCCTGCCTGTTCCTGCCGCATTGTCTCCAACATaGTCTTGTATGCCTGACGGGCTGCCATGGTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: VLLPVPAALSPT*SCMPDGLPWSA Trigger: AGCTGACCATGGCAGCCCGTCAGGCATACAAGACCATGTTGGAGACAATGCGGCAGGAACAGGCAGGAGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS CAA 72 bp | ACTGAGGTCCAGGTTCTCCTGCCTGTTCCTGCCGCATaGTCTCCAACATGGTCTTGTATGCCTGACGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TEVQVLLPVPAA*SPTWSCMPDGL Trigger: CAGCCCGTCAGGCATACAAGACCATGTTGGAGACAATGCGGCAGGAACAGGCAGGAGAACCTGGACCTCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
||
| CDS CAA 90 bp | ACAATGCTGACAGGAACAGCTTTATTCAGGCTCCGCCCCAGAGCCTaGCGATTGAGTGCAAACACGAAGGGGATGTTCTGCTCGCAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: TMLTGTALFRLRPRA*RLSANTKGMFCSQA Trigger: CGCCTGCGAGCAGAACATCCCCTTCGTGTTTGCACTCAATCGCAAGGCTCTGGGGCGGAGCCTGAATAAAGCTGTTCCTGTCAGCATTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
||
| CDS TCA 72 bp | GATTCTTCTGTCTTCTCTGGACCTGTGGGGTTGTCCTaGCTGGGGGTTTGGTTACTGGCGCCACTCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: DSSVFSGPVGLS*LGVWLLAPLST Trigger: TGTGGAGAGTGGCGCCAGTAACCAAACCCCCAGTCAGGACAACCCCACAGGTCCAGAGAAGACAGAAGAATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS TCA 72 bp | TCCTGCCGCATTGTCTCCAACATGGTCTTGTATGCCTaGCGGGCTGCCATGGTCAGCTCAACCATCTTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SCRIVSNMVLYA*RAAMVSSTILW Trigger: CCACAAGATGGTTGAGCTGACCATGGCAGCCCGTCAGGCATACAAGACCATGTTGGAGACAATGCGGCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
||
| CDS TCA 72 bp | GACGCCTCCAGTGAGTCTTCCAGCTCCAGGGCACGCTaGCTGTACGCTTCCAGGTGCTTTTTCCAAATCTCA | + |
|
Preference number: 6 (lower is better) Translates to: DASSESSSSRAR*LYASRCFFQIS Trigger: TGAGATTTGGAAAAAGCACCTGGAAGCGTACAGTCAGCGTGCCCTGGAGCTGGAAGACTCACTGGAGGCGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS CAA 72 bp | GTCATCACTGGCCACCGTCAGGCTCACAGCACTTTCTaGGAGTCGCTGCTGCATCCTCTCTTGCCGTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: VITGHRQAHSTF*ESLLHPLLPFF Trigger: AAAGAACGGCAAGAGAGGATGCAGCAGCGACTCCAAGAAAGTGCTGTGAGCCTGACGGTGGCCAGTGATGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS CAA 72 bp | ACAGCTTTATTCAGGCTCCGCCCCAGAGCCTTGCGATaGAGTGCAAACACGAAGGGGATGTTCTGCTCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TALFRLRPRALR*SANTKGMFCSQ Trigger: CTGCGAGCAGAACATCCCCTTCGTGTTTGCACTCAATCGCAAGGCTCTGGGGCGGAGCCTGAATAAAGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS GCA 72 bp | GTCTCGCCTCACAGGGCACCGCATTGTCAGCCCTTCTaGTGCTTGACTTTTGCTCTTCACATGCTCTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: VSPHRAPHCQPF*CLTFALHMLFS Trigger: AGAGAAGAGCATGTGAAGAGCAAAAGTCAAGCAGCAGAAGGGCTGACAATGCGGTGCCCTGTGAGGCGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
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| CDS GCA 72 bp | TCACAGCTCCATCAGTGTGATCGCTCTTCACCATTTTaGCCTCTACCATATCTGCGACGGGCTTGCCGACGT | + |
|
Preference number: 6 (lower is better) Translates to: SQLHQCDRSSPF*PLPYLRRACRR Trigger: ACGTCGGCAAGCCCGTCGCAGATATGGTAGAGGGCAAAATGGTGAAGAGCGATCACACTGATGGAGCTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
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| CDS GCA 72 bp | CTGTTCCTGCCGCATTGTCTCCAACATGGTCTTGTATaGCTGACGGGCTGCCATGGTCAGCTCAACCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: LFLPHCLQHGLV*LTGCHGQLNHL Trigger: AAGATGGTTGAGCTGACCATGGCAGCCCGTCAGGCATACAAGACCATGTTGGAGACAATGCGGCAGGAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS CCA 72 bp | GCCCTCTGTGTCTTCTTTCCGACGCAACTGACAGGTTaGGGAATTCCTCTGCATCTTCAATCCTTGGCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: ALCVFFPTQLTG*GIPLHLQSLAA Trigger: AGCCGCCAAGGATTGAAGATGCAGAGGAATTCCCCAACCTGTCAGTTGCGTCGGAAAGAAGACACAGAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS CAA 72 bp | ACAGGAACAGCTTTATTCAGGCTCCGCCCCAGAGCCTaGCGATTGAGTGCAAACACGAAGGGGATGTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TGTALFRLRPRA*RLSANTKGMFC Trigger: GCAGAACATCCCCTTCGTGTTTGCACTCAATCGCAAGGCTCTGGGGCGGAGCCTGAATAAAGCTGTTCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS CAA 90 bp | TGCAGCGTGTCGTCCAGCCCACCTTTAGACTGGGTCTTCTCACAGTaGGGAGAGATGATGATGCACTTCAGCTTCCTGAGCTTCAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: CSVSSSPPLDWVFSQ*GEMMMHFSFLSFRC Trigger: ACACCTGAAGCTCAGGAAGCTGAAGTGCATCATCATCTCTCCCAACTGTGAGAAGACCCAGTCTAAAGGTGGGCTGGACGACACGCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS GCA 72 bp | CATTGTCTCCAACATGGTCTTGTATGCCTGACGGGCTaGCATGGTCAGCTCAACCATCTTGTGGAACTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: HCLQHGLVCLTG*HGQLNHLVELV Trigger: GACCAGTTCCACAAGATGGTTGAGCTGACCATGGCAGCCCGTCAGGCATACAAGACCATGTTGGAGACAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS CCA 72 bp | CATTTTCTGTTCAGCTGCTGGTGGTTCCTGTACAAATaGATAGTAGGTGGCCGCACAGCCTGGGAAGACACG | + |
|
Preference number: 6 (lower is better) Translates to: HFLFSCWWFLYK*IVGGRTAWEDT Trigger: CGTGTCTTCCCAGGCTGTGCGGCCACCTACTATCCATTTGTACAGGAACCACCAGCAGCTGAACAGAAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
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| CDS CCA 72 bp | GCGCTATCTCAGAAGACACGTACTGTGCTGGAAAGGTaGGGGCTCCGAAAGCCATGTCTTCGGGATACATTT | + |
|
Preference number: 6 (lower is better) Translates to: ALSQKTRTVLER*GLRKPCLRDTF Trigger: AAATGTATCCCGAAGACATGGCTTTCGGAGCCCCCACCTTTCCAGCACAGTACGTGTCTTCTGAGATAGCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
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| CDS CAA 72 bp | AAGACACGTGTCTCTGAGGACTCTGACCACGCCACGTaGAGCCCAGCAAACTTAGGGACGAATGGTTTGACA | + |
|
Preference number: 6 (lower is better) Translates to: KTRVSEDSDHAT*SPANLGTNGLT Trigger: TGTCAAACCATTCGTCCCTAAGTTTGCTGGGCTCAACGTGGCGTGGTCAGAGTCCTCAGAGACACGTGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
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| CDS CAA 72 bp | CCTCACAGGGCACCGCATTGTCAGCCCTTCTGCTGCTaGACTTTTGCTCTTCACATGCTCTTCTCTCATCAG | + |
|
Preference number: 6 (lower is better) Translates to: PHRAPHCQPFCC*TFALHMLFSHQ Trigger: CTGATGAGAGAAGAGCATGTGAAGAGCAAAAGTCAAGCAGCAGAAGGGCTGACAATGCGGTGCCCTGTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
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| CDS CAA 72 bp | CTGACAGGTTGGGGAATTCCTCTGCATCTTCAATCCTaGGCGGCTCCTGAACCGTCAGGACTTCATAACTCG | + |
|
Preference number: 6 (lower is better) Translates to: LTGWGIPLHLQS*AAPEPSGLHNS Trigger: CGAGTTATGAAGTCCTGACGGTTCAGGAGCCGCCAAGGATTGAAGATGCAGAGGAATTCCCCAACCTGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS CAA 90 bp | CTGGTCTCGCCTCACAGGGCACCGCATTGTCAGCCCTTCTGCTGCTaGACTTTTGCTCTTCACATGCTCTTCTCTCATCAGAGGGTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LVSPHRAPHCQPFCC*TFALHMLFSHQRVF Trigger: AAAAACCCTCTGATGAGAGAAGAGCATGTGAAGAGCAAAAGTCAAGCAGCAGAAGGGCTGACAATGCGGTGCCCTGTGAGGCGAGACCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
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| CDS TCA 72 bp | CTCACAGGGCACCGCATTGTCAGCCCTTCTGCTGCTTaGCTTTTGCTCTTCACATGCTCTTCTCTCATCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LTGHRIVSPSAA*LLLFTCSSLIR Trigger: TCTGATGAGAGAAGAGCATGTGAAGAGCAAAAGTCAAGCAGCAGAAGGGCTGACAATGCGGTGCCCTGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
||
| CDS GCA 72 bp | GGCACCGCATTGTCAGCCCTTCTGCTGCTTGACTTTTaGTCTTCACATGCTCTTCTCTCATCAGAGGGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: GTALSALLLLDF*SSHALLSSEGF Trigger: AAAACCCTCTGATGAGAGAAGAGCATGTGAAGAGCAAAAGTCAAGCAGCAGAAGGGCTGACAATGCGGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
||
| CDS TCA 72 bp | ATAACCCATTGGTGTCCAAGACAACTCTTGGGTACATaGAGGGGAACTGGTAGTGGCATTACTGGTCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: ITHWCPRQLLGT*RGTGSGITGHS Trigger: GCTGTGACCAGTAATGCCACTACCAGTTCCCCTTCATGTACCCAAGAGTTGTCTTGGACACCAATGGGTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
||
| CDS CCA 72 bp | CATGTCTTCGGGATACATTTTCTGTTCAGCTGCTGGTaGTTCCTGTACAAATGGATAGTAGGTGGCCGCACA | + |
|
Preference number: 6 (lower is better) Translates to: HVFGIHFLFSCW*FLYKWIVGGRT Trigger: TGTGCGGCCACCTACTATCCATTTGTACAGGAACCACCAGCAGCTGAACAGAAAATGTATCCCGAAGACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
||
| CDS TCA 72 bp | GGATTTACAATCCTCCTGTATGAGCCTGCCAAGTGCTaGATTACAGTTTTTGCCACTACACCCAGACCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GFTILLYEPAKC*ITVFATTPRPH Trigger: ATGGGGTCTGGGTGTAGTGGCAAAAACTGTAATTCAGCACTTGGCAGGCTCATACAGGAGGATTGTAAATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
||
| CDS GCA 72 bp | GAAAGCCATGTCTTCGGGATACATTTTCTGTTCAGCTaGTGGTGGTTCCTGTACAAATGGATAGTAGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ESHVFGIHFLFS*WWFLYKWIVGG Trigger: GCCACCTACTATCCATTTGTACAGGAACCACCAGCAGCTGAACAGAAAATGTATCCCGAAGACATGGCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
||
| CDS CAA 72 bp | AATCTGAAGACACTGTCTGCCGAACAATATAACCCATaGGTGTCCAAGACAACTCTTGGGTACATGAAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: NLKTLSAEQYNP*VSKTTLGYMKG Trigger: CCCCTTCATGTACCCAAGAGTTGTCTTGGACACCAATGGGTTATATTGTTCGGCAGACAGTGTCTTCAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
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| CDS CAA 90 bp | GCCTTTATTTTGAGACAAGGATTCACTATGTGGCCCAGGATAGCCTaGGATTTACAATCCTCCTGTATGAGCCTGCCAAGTGCTGAATTA | + |
|
Preference number: 6 (lower is better) Translates to: AFILRQGFTMWPRIA*DLQSSCMSLPSAEL Trigger: TAATTCAGCACTTGGCAGGCTCATACAGGAGGATTGTAAATCCAAGGCTATCCTGGGCCACATAGTGAATCCTTGTCTCAAAATAAAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110044.2 |
||
| CDS TCA 72 bp | TTTGGAGCTTTCGTTTTGTTCAAGTTCACCTCCTTGTaGTGCTTTGGCCTTTGGAGCAGGATAAACACGCTT | + |
|
Preference number: 6 (lower is better) Translates to: FGAFVLFKFTSL*CFGLWSRINTL Trigger: AAGCGTGTTTATCCTGCTCCAAAGGCCAAAGCATCACAAGGAGGTGAACTTGAACAAAACGAAAGCTCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
||
| CDS TCA 72 bp | CTTGTTTTAAATTCATTCTGCGTCTGCTGTTTACTGTaGAGCTTCGGTGATTGCCCTCTGTGTCTTCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LVLNSFCVCCLL*SFGDCPLCLLS Trigger: GGAAAGAAGACACAGAGGGCAATCACCGAAGCTTCACAGTAAACAGCAGACGCAGAATGAATTTAAAACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
||
| CDS CCA 72 bp | TCTTCTTTAGGTTTATCATGGAAGTCACATTTTCAGTaGCTGCTGCTGAATCTGAAGACACTGTCTGCCGAA | + |
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Preference number: 6 (lower is better) Translates to: SSLGLSWKSHFQ*LLLNLKTLSAE Trigger: TTCGGCAGACAGTGTCTTCAGATTCAGCAGCAGCCACTGAAAATGTGACTTCCATGATAAACCTAAAGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
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| CDS CCA 72 bp | TTTCGTTTTGTTCAAGTTCACCTCCTTGTGATGCTTTaGCCTTTGGAGCAGGATAAACACGCTTTTCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: FRFVQVHLLVML*PLEQDKHAFLC Trigger: ACAGAGAAAAGCGTGTTTATCCTGCTCCAAAGGCCAAAGCATCACAAGGAGGTGAACTTGAACAAAACGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040117.15 |
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| CDS GCA 72 bp | TTCTGTGTCTCTGGCATGTTACTGTTCTTTGGACTCTaGAGTTCAGGAAAGTCTAACCTACTAAACTCAAAT | + |
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Preference number: 6 (lower is better) Translates to: FCVSGMLLFFGL*SSGKSNLLNSN Trigger: ATTTGAGTTTAGTAGGTTAGACTTTCCTGAACTGCAGAGTCCAAAGAACAGTAACATGCCAGAGACACAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040117.15 ENSMUST00000110044.2 |
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