Pregenerated sensors for SEC63 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019802Ensembl transcript IDs: ENSMUST00000019937.5
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTCCCAGCCAGTCTCGATCTGAAGGCAAAGCCACACCCCCGGGCCTaGAGAGGAAGGAAGCAGGGTTCCAGTGAGAACAACTATTACATG | + |
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Preference number: 1 (lower is better) Translates to: FPASLDLKAKPHPRA*RGRKQGSSENNYYM Trigger: CATGTAATAGTTGTTCTCACTGGAACCCTGCTTCCTTCCTCTGCAGGCCCGGGGGTGTGGCTTTGCCTTCAGATCGAGACTGGCTGGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR CCA 90 bp | ATCAAGTCACACAAAGAAAGCCTCAGTACACTGCCTCATTCCACATaGCAGGAACTGGTGTCGGACAGGCCCGAACGTCCCAGCACAGCA | + |
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Preference number: 1 (lower is better) Translates to: IKSHKESLSTLPHST*QELVSDRPERPSTA Trigger: TGCTGTGCTGGGACGTTCGGGCCTGTCCGACACCAGTTCCTGCCATGTGGAATGAGGCAGTGTACTGAGGCTTTCTTTGTGTGACTTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR CCA 90 bp | ACAGTACCACTCAACAGCCTGTTCTTCTCCACCCCTAGGGCATGCTaGGAAAGGCAGAGCAAAGAACGAGATTGCTCCACACACAGAATC | + |
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Preference number: 1 (lower is better) Translates to: TVPLNSLFFSTPRAC*ERQSKERDCSTHRI Trigger: GATTCTGTGTGTGGAGCAATCTCGTTCTTTGCTCTGCCTTTCCCAGCATGCCCTAGGGGTGGAGAAGAACAGGCTGTTGAGTGGTACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR GCA 90 bp | AGTAAAGTCGGCAACCCTTCCCTCCATATCAGCCCTCACTGCTGCTaGTTTATGACCTCTCACAGAGCAGCAATGTTTGCAAGGATGTGC | + |
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Preference number: 1 (lower is better) Translates to: SKVGNPSLHISPHCC*FMTSHRAAMFARMC Trigger: GCACATCCTTGCAAACATTGCTGCTCTGTGAGAGGTCATAAAGCAGCAGCAGTGAGGGCTGATATGGAGGGAAGGGTTGCCGACTTTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR GCA 90 bp | ATTCAATGTCTCGAGTCTTCTCAAAAATCCCAACAGTTTAGAGACTaGGAACATCTGCTTTTGGGTCTGAGACCTCAGTCAGGTGGCCCG | + |
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Preference number: 1 (lower is better) Translates to: IQCLESSQKSQQFRD*EHLLLGLRPQSGGP Trigger: CGGGCCACCTGACTGAGGTCTCAGACCCAAAAGCAGATGTTCGCAGTCTCTAAACTGTTGGGATTTTTGAGAAGACTCGAGACATTGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR GCA 90 bp | AAAACAAAACACAAATCAAGTCACACAAAGAAAGCCTCAGTACACTaGCTCATTCCACATGGCAGGAACTGGTGTCGGACAGGCCCGAAC | + |
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Preference number: 1 (lower is better) Translates to: KTKHKSSHTKKASVH*LIPHGRNWCRTGPN Trigger: GTTCGGGCCTGTCCGACACCAGTTCCTGCCATGTGGAATGAGGCAGTGTACTGAGGCTTTCTTTGTGTGACTTGATTTGTGTTTTGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR TCA 90 bp | TTGGCCACTGTGCCAGTGGAGAAAGGAGAAATTCCCACCATGTGCTaGCTAAAAGTCCAAGTTAAGTCCTTAACACAGAGAGTGTCCATA | + |
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Preference number: 1 (lower is better) Translates to: LATVPVEKGEIPTMC*LKVQVKSLTQRVSI Trigger: TATGGACACTCTCTGTGTTAAGGACTTAACTTGGACTTTTAGTCAGCACATGGTGGGAATTTCTCCTTTCTCCACTGGCACAGTGGCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR TCA 90 bp | TCTTTCCCCAAAGCACTTGTTAAGAGGAAAACTGGTCCTTTAGGTTaGGATGTTGCTACACATCACAACATAGGCAAACAGAATCAAGTT | + |
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Preference number: 1 (lower is better) Translates to: SFPKALVKRKTGPLG*DVATHHNIGKQNQV Trigger: AACTTGATTCTGTTTGCCTATGTTGTGATGTGTAGCAACATCTCAACCTAAAGGACCAGTTTTCCTCTTAACAAGTGCTTTGGGGAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR CCA 90 bp | TCACAACATAGGCAAACAGAATCAAGTTGTTGGAATTTCCAATCATaGAAGACATGCTGTTTTGTAAGCATGGTGCTGTTATCAGGGTGT | + |
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Preference number: 1 (lower is better) Translates to: SQHRQTESSCWNFQS*KTCCFVSMVLLSGC Trigger: ACACCCTGATAACAGCACCATGCTTACAAAACAGCATGTCTTCCATGATTGGAAATTCCAACAACTTGATTCTGTTTGCCTATGTTGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR CCA 90 bp | AGATGTTGCTACACATCACAACATAGGCAAACAGAATCAAGTTGTTaGAATTTCCAATCATGGAAGACATGCTGTTTTGTAAGCATGGTG | + |
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Preference number: 1 (lower is better) Translates to: RCCYTSQHRQTESSC*NFQSWKTCCFVSMV Trigger: CACCATGCTTACAAAACAGCATGTCTTCCATGATTGGAAATTCCAACAACTTGATTCTGTTTGCCTATGTTGTGATGTGTAGCAACATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR-3UTR GCA 90 bp | TCAGTACACTGCCTCATTCCACATGGCAGGAACTGGTGTCGGACAGGCCCGAACCCACACCCCCGGGCCTaGAGAGGAAGGAAGCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: SVHCLIPHGRNWCRTGPNPHPRA*RGRKQG Trigger: ACCCTGCTTCCTTCCTCTGCAGGCCCGGGGGTGTGG...GTTCGGGCCTGTCCGACACCAGTTCCTGCCATGTGGAATGAGGCAGTGTACTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR-3UTR CCA 90 bp | TCAGTACACTGCCTCATTCCACATGGCAGGAACTGGTGTCGGACAGGCCCGAACGACGAGCACCCTAGCTaGAGTCTTTCCCCAAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: SVHCLIPHGRNWCRTGPNDEHPS*SLSPKH Trigger: GTGCTTTGGGGAAAGACTCCAGCTAGGGTGCTCGTC...GTTCGGGCCTGTCCGACACCAGTTCCTGCCATGTGGAATGAGGCAGTGTACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR-3UTR TCA 90 bp | TCAGCCTTCGCACCTGCCACACTTTCCACTAGCAGGAAGACCCCTTGTGGAAAGGCACCACCCCATACCTaGAAGGCTTTAAAAACCCTT | + |
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Preference number: 2 (lower is better) Translates to: SAFAPATLSTSRKTPCGKAPPHT*KALKTL Trigger: AAGGGTTTTTAAAGCCTTTCAGGTATGGGGTGGTGC...CTTTCCACAAGGGGTCTTCCTGCTAGTGGAAAGTGTGGCAGGTGCGAAGGCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR CAA 90 bp | TCTGTATACCTTTCAGAGGGCAAAGAGCCACTAGAGAAGCGGTCCTaGAGCCTGGCTCCCTCAGGAAAACTAGGAAATGTGACCAGCACA | + |
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Preference number: 2 (lower is better) Translates to: SVYLSEGKEPLEKRS*SLAPSGKLGNVTST Trigger: TGTGCTGGTCACATTTCCTAGTTTTCCTGAGGGAGCCAGGCTCAAGGACCGCTTCTCTAGTGGCTCTTTGCCCTCTGAAAGGTATACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR-3UTR TCA 90 bp | CATCTCAAGACACACTTAGCTAACCACTGCACAGCTGGTAAAATGTCATGCTTCCAGCCAGTCTCGATCTaGAGGCAAAGCCACACCCCC | + |
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Preference number: 2 (lower is better) Translates to: HLKTHLANHCTAGKMSCFQPVSI*RQSHTP Trigger: GGGGGTGTGGCTTTGCCTTCAGATCGAGACTGGCTG...GAAGCATGACATTTTACCAGCTGTGCAGTGGTTAGCTAAGTGTGTCTTGAGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR-3UTR TCA 90 bp | AGCAGGACAGTACCACTCAACAGCCTGTTCTTCTCCACCCCTAGGGCATGCTGGTTAGGTTGTACTAAATaGGAGAGAAGAGTTCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: SRTVPLNSLFFSTPRACWLGCTK*ERRVLP Trigger: AGGAAGAACTCTTCTCTCTCATTTAGTACAACCTAA...CCAGCATGCCCTAGGGGTGGAGAAGAACAGGCTGTTGAGTGGTACTGTCCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR-3UTR GCA 90 bp | CATCTCAAGACACACTTAGCTAACCACTGCACAGCTGGTAAAATGTCATGCTTCTCCACCCCTAGGGCATaGTGGGAAAGGCAGAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: HLKTHLANHCTAGKMSCFSTPRA*WERQSK Trigger: TTTGCTCTGCCTTTCCCAGCATGCCCTAGGGGTGGA...GAAGCATGACATTTTACCAGCTGTGCAGTGGTTAGCTAAGTGTGTCTTGAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR-3UTR CCA 90 bp | TCAGTACACTGCCTCATTCCACATGGCAGGAACTGGTGTCGGACAGGCCCGAACATTGCAACAGTACTTTaGCCTATGGAGAGTTTGATA | + |
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Preference number: 2 (lower is better) Translates to: SVHCLIPHGRNWCRTGPNIATVL*PMESLI Trigger: TATCAAACTCTCCATAGGCCAAAGTACTGTTGCAAT...GTTCGGGCCTGTCCGACACCAGTTCCTGCCATGTGGAATGAGGCAGTGTACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR-3UTR GCA 90 bp | CTAACCACTGCACAGCTGGTAAAATGTCATGCTTCGGTTCACTGGTCGTTGTTTCAGAGCAGCAATGTTTaGAAGGATGTGCAAACGCTG | + |
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Preference number: 2 (lower is better) Translates to: LTTAQLVKCHASVHWSLFQSSNV*KDVQTL Trigger: CAGCGTTTGCACATCCTTGCAAACATTGCTGCTCTG...AAACAACGACCAGTGAACCGAAGCATGACATTTTACCAGCTGTGCAGTGGTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR-3UTR TCA 90 bp | TCTTCTCAAAAATCCCAACAGTTTAGAGACTGCGAACATCTGCTTTTGGGTCTGCCTTTTCCAAAAGGCTaGATGACATCAACCGAGCGT | + |
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Preference number: 2 (lower is better) Translates to: SSQKSQQFRDCEHLLLGLPFPKG*MTSTER Trigger: ACGCTCGGTTGATGTCATTCAGCCTTTTGGAAAAGG...CAGACCCAAAAGCAGATGTTCGCAGTCTCTAAACTGTTGGGATTTTTGAGAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR-3UTR TCA 90 bp | ACACACAGAATCTTAATTCAATGTCTCGAGTCTTCTCAAAAATCCCAACAGTTTACTGCTGCTGCTTTATaGCCTCTCACAGAGCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: THRILIQCLESSQKSQQFTAAAL*PLTEQQ Trigger: TTGCTGCTCTGTGAGAGGTCATAAAGCAGCAGCAGT...AAACTGTTGGGATTTTTGAGAAGACTCGAGACATTGAATTAAGATTCTGTGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR-3UTR GCA 90 bp | ACACACAGAATCTTAATTCAATGTCTCGAGTCTTCTCAAAAATCCCAACAGTTTAGCCCTCACTGCTGCTaGTTTATGACCTCTCACAGA | + |
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Preference number: 2 (lower is better) Translates to: THRILIQCLESSQKSQQFSPHCC*FMTSHR Trigger: TCTGTGAGAGGTCATAAAGCAGCAGCAGTGAGGGCT...AAACTGTTGGGATTTTTGAGAAGACTCGAGACATTGAATTAAGATTCTGTGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR CAA 90 bp | TCTATTTTATTAACAGGAGTCCAAATGAATACAAAAGTGCCTCCTTaGTATGCTGTAGTTACTGTCTTCAGAAGGCTTCGGACAGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: SILLTGVQMNTKVPP*YAVVTVFRRLRTES Trigger: TGACTCTGTCCGAAGCCTTCTGAAGACAGTAACTACAGCATACAAAGGAGGCACTTTTGTATTCATTTGGACTCCTGTTAATAAAATAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR-3UTR TCA 90 bp | ACACACAGAATCTTAATTCAATGTCTCGAGTCTTCTCAAAAATCCCAACAGTTTACTGGTCCTTTAGGTTaGGATGTTGCTACACATCAC | + |
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Preference number: 2 (lower is better) Translates to: THRILIQCLESSQKSQQFTGPLG*DVATHH Trigger: GTGATGTGTAGCAACATCTCAACCTAAAGGACCAGT...AAACTGTTGGGATTTTTGAGAAGACTCGAGACATTGAATTAAGATTCTGTGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR TCA 72 bp | CCAGCCAACCCTGGAGCTTCCCAGCCAGTCTCGATCTaGAGGCAAAGCCACACCCCCGGGCCTGCAGAGGAA | + |
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Preference number: 3 (lower is better) Translates to: PANPGASQPVSI*RQSHTPGPAEE Trigger: TTCCTCTGCAGGCCCGGGGGTGTGGCTTTGCCTTCAGATCGAGACTGGCTGGGAAGCTCCAGGGTTGGCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR CCA 72 bp | GCCTCAGTACACTGCCTCATTCCACATGGCAGGAACTaGTGTCGGACAGGCCCGAACGTCCCAGCACAGCAG | + |
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Preference number: 3 (lower is better) Translates to: ASVHCLIPHGRN*CRTGPNVPAQQ Trigger: CTGCTGTGCTGGGACGTTCGGGCCTGTCCGACACCAGTTCCTGCCATGTGGAATGAGGCAGTGTACTGAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR-3UTR CAA 90 bp | AGCAGGACAGTACCACTCAACAGCCTGTTCTTCTCCACCCCTAGGGCATGCTGGCTAGAGAAGCGGTCCTaGAGCCTGGCTCCCTCAGGA | + |
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Preference number: 3 (lower is better) Translates to: SRTVPLNSLFFSTPRACWLEKRS*SLAPSG Trigger: TCCTGAGGGAGCCAGGCTCAAGGACCGCTTCTCTAG...CCAGCATGCCCTAGGGGTGGAGAAGAACAGGCTGTTGAGTGGTACTGTCCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR CCA 72 bp | CGAACATCTGCTTTTGGGTCTGAGACCTCAGTCAGGTaGCCCGATGTCAGCCTTCGCACCTGCCACACTTTC | + |
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Preference number: 3 (lower is better) Translates to: RTSAFGSETSVR*PDVSLRTCHTF Trigger: GAAAGTGTGGCAGGTGCGAAGGCTGACATCGGGCCACCTGACTGAGGTCTCAGACCCAAAAGCAGATGTTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR-3UTR CAA 90 bp | TCAGTACACTGCCTCATTCCACATGGCAGGAACTGGTGTCGGACAGGCCCGAACTGCGAACATCTGCTTTaGGGTCTGAGACCTCAGTCA | + |
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Preference number: 3 (lower is better) Translates to: SVHCLIPHGRNWCRTGPNCEHLL*GLRPQS Trigger: TGACTGAGGTCTCAGACCCAAAAGCAGATGTTCGCA...GTTCGGGCCTGTCCGACACCAGTTCCTGCCATGTGGAATGAGGCAGTGTACTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR CCA 72 bp | CTCAACAGCCTGTTCTTCTCCACCCCTAGGGCATGCTaGGAAAGGCAGAGCAAAGAACGAGATTGCTCCACA | + |
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Preference number: 3 (lower is better) Translates to: LNSLFFSTPRAC*ERQSKERDCST Trigger: TGTGGAGCAATCTCGTTCTTTGCTCTGCCTTTCCCAGCATGCCCTAGGGGTGGAGAAGAACAGGCTGTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR GCA 72 bp | GGCAACCCTTCCCTCCATATCAGCCCTCACTGCTGCTaGTTTATGACCTCTCACAGAGCAGCAATGTTTGCA | + |
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Preference number: 3 (lower is better) Translates to: GNPSLHISPHCC*FMTSHRAAMFA Trigger: TGCAAACATTGCTGCTCTGTGAGAGGTCATAAAGCAGCAGCAGTGAGGGCTGATATGGAGGGAAGGGTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR-3UTR CAA 90 bp | AGCAGGACAGTACCACTCAACAGCCTGTTCTTCTCCACCCCTAGGGCATGCTGGCTTTCCCCAAAGCACTaGTTAAGAGGAAAACTGGTC | + |
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Preference number: 3 (lower is better) Translates to: SRTVPLNSLFFSTPRACWLSPKH*LRGKLV Trigger: GACCAGTTTTCCTCTTAACAAGTGCTTTGGGGAAAG...CCAGCATGCCCTAGGGGTGGAGAAGAACAGGCTGTTGAGTGGTACTGTCCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR-3UTR CAA 90 bp | AGCAGGACAGTACCACTCAACAGCCTGTTCTTCTCCACCCCTAGGGCATGCTGGACAAAAGTGCCTCCTTaGTATGCTGTAGTTACTGTC | + |
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Preference number: 3 (lower is better) Translates to: SRTVPLNSLFFSTPRACWTKVPP*YAVVTV Trigger: GACAGTAACTACAGCATACAAAGGAGGCACTTTTGT...CCAGCATGCCCTAGGGGTGGAGAAGAACAGGCTGTTGAGTGGTACTGTCCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR-3UTR CAA 90 bp | TCAGTACACTGCCTCATTCCACATGGCAGGAACTGGTGTCGGACAGGCCCGAACGTGGAAAGCTCTATTTaGACAGACATTCTGCAGATC | + |
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Preference number: 3 (lower is better) Translates to: SVHCLIPHGRNWCRTGPNVESSI*TDILQI Trigger: GATCTGCAGAATGTCTGTCAAAATAGAGCTTTCCAC...GTTCGGGCCTGTCCGACACCAGTTCCTGCCATGTGGAATGAGGCAGTGTACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR TCA 72 bp | CTTCCCTCCATATCAGCCCTCACTGCTGCTGCTTTATaGCCTCTCACAGAGCAGCAATGTTTGCAAGGATGT | + |
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Preference number: 3 (lower is better) Translates to: LPSISALTAAAL*PLTEQQCLQGC Trigger: ACATCCTTGCAAACATTGCTGCTCTGTGAGAGGTCATAAAGCAGCAGCAGTGAGGGCTGATATGGAGGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR TCA 72 bp | TCACCAGAGACTCTCAAGCCAGAGAAGCCAGTTGTTTaGACAGTCTGTATACCTTTCAGAGGGCAAAGAGCC | + |
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Preference number: 3 (lower is better) Translates to: SPETLKPEKPVV*TVCIPFRGQRA Trigger: GGCTCTTTGCCCTCTGAAAGGTATACAGACTGTTCAAACAACTGGCTTCTCTGGCTTGAGAGTCTCTGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR GCA 72 bp | CACAAATCAAGTCACACAAAGAAAGCCTCAGTACACTaGCTCATTCCACATGGCAGGAACTGGTGTCGGACA | + |
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Preference number: 3 (lower is better) Translates to: HKSSHTKKASVH*LIPHGRNWCRT Trigger: TGTCCGACACCAGTTCCTGCCATGTGGAATGAGGCAGTGTACTGAGGCTTTCTTTGTGTGACTTGATTTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR CCA 72 bp | AGGAAAGGAAAGGAAAGGAAAGGAAAGGGGAGGTATTaGCCACTGTGCCAGTGGAGAAAGGAGAAATTCCCA | + |
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Preference number: 3 (lower is better) Translates to: RKGKERKGKGRY*PLCQWRKEKFP Trigger: TGGGAATTTCTCCTTTCTCCACTGGCACAGTGGCCAATACCTCCCCTTTCCTTTCCTTTCCTTTCCTTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR-3UTR CAA 90 bp | TCAGCCTTCGCACCTGCCACACTTTCCACTAGCAGGAAGACCCCTTGTGGAAAGTTGTTTTCATGTGCCTaGACTTTTACTGAGAGCATA | + |
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Preference number: 3 (lower is better) Translates to: SAFAPATLSTSRKTPCGKLFSCA*TFTESI Trigger: TATGCTCTCAGTAAAAGTCAAGGCACATGAAAACAA...CTTTCCACAAGGGGTCTTCCTGCTAGTGGAAAGTGTGGCAGGTGCGAAGGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR GCA 72 bp | CTCGAGTCTTCTCAAAAATCCCAACAGTTTAGAGACTaGGAACATCTGCTTTTGGGTCTGAGACCTCAGTCA | + |
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Preference number: 3 (lower is better) Translates to: LESSQKSQQFRD*EHLLLGLRPQS Trigger: TGACTGAGGTCTCAGACCCAAAAGCAGATGTTCGCAGTCTCTAAACTGTTGGGATTTTTGAGAAGACTCGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR-3UTR CAA 90 bp | AATACAAAAGTGCCTCCTTTGTATGCTGTAGTTACTGTCTTCAGAAGGCTTCGGCCAGCGGCCTCTTTTTaGCATCCGTTTCTAGTAAAG | + |
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Preference number: 3 (lower is better) Translates to: NTKVPPLYAVVTVFRRLRPAASF*HPFLVK Trigger: CTTTACTAGAAACGGATGCAAAAAAGAGGCCGCTGG...CCGAAGCCTTCTGAAGACAGTAACTACAGCATACAAAGGAGGCACTTTTGTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR TCA 72 bp | GTGCCAGTGGAGAAAGGAGAAATTCCCACCATGTGCTaGCTAAAAGTCCAAGTTAAGTCCTTAACACAGAGA | + |
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Preference number: 3 (lower is better) Translates to: VPVEKGEIPTMC*LKVQVKSLTQR Trigger: TCTCTGTGTTAAGGACTTAACTTGGACTTTTAGTCAGCACATGGTGGGAATTTCTCCTTTCTCCACTGGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR-3UTR CAA 90 bp | CTAACCACTGCACAGCTGGTAAAATGTCATGCTTCGGTTCACTGGTCGTTGTTTAGAGAAGCCAGTTGTTaGAACAGTCTGTATACCTTT | + |
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Preference number: 3 (lower is better) Translates to: LTTAQLVKCHASVHWSLFREASC*NSLYTF Trigger: AAAGGTATACAGACTGTTCAAACAACTGGCTTCTCT...AAACAACGACCAGTGAACCGAAGCATGACATTTTACCAGCTGTGCAGTGGTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR GCA 72 bp | AGGAGTCCAAATGAATACAAAAGTGCCTCCTTTGTATaGTGTAGTTACTGTCTTCAGAAGGCTTCGGACAGA | + |
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Preference number: 3 (lower is better) Translates to: RSPNEYKSASFV*CSYCLQKASDR Trigger: TCTGTCCGAAGCCTTCTGAAGACAGTAACTACAGCATACAAAGGAGGCACTTTTGTATTCATTTGGACTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR TCA 72 bp | AAAGCACTTGTTAAGAGGAAAACTGGTCCTTTAGGTTaGGATGTTGCTACACATCACAACATAGGCAAACAG | + |
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Preference number: 3 (lower is better) Translates to: KALVKRKTGPLG*DVATHHNIGKQ Trigger: CTGTTTGCCTATGTTGTGATGTGTAGCAACATCTCAACCTAAAGGACCAGTTTTCCTCTTAACAAGTGCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR GCA 72 bp | GAATCAAGTTGTTGGAATTTCCAATCATGGAAGACATaGTGTTTTGTAAGCATGGTGCTGTTATCAGGGTGT | + |
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Preference number: 3 (lower is better) Translates to: ESSCWNFQSWKT*CFVSMVLLSGC Trigger: ACACCCTGATAACAGCACCATGCTTACAAAACAGCATGTCTTCCATGATTGGAAATTCCAACAACTTGATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR CCA 72 bp | AGGCAAACAGAATCAAGTTGTTGGAATTTCCAATCATaGAAGACATGCTGTTTTGTAAGCATGGTGCTGTTA | + |
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Preference number: 3 (lower is better) Translates to: RQTESSCWNFQS*KTCCFVSMVLL Trigger: TAACAGCACCATGCTTACAAAACAGCATGTCTTCCATGATTGGAAATTCCAACAACTTGATTCTGTTTGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| 3UTR-3UTR CAA 90 bp | ACACACAGAATCTTAATTCAATGTCTCGAGTCTTCTCAAAAATCCCAACAGTTTGCAAACAGAATCAAGTaGTTGGAATTTCCAATCATG | + |
|
Preference number: 3 (lower is better) Translates to: THRILIQCLESSQKSQQFANRIK*LEFPIM Trigger: CATGATTGGAAATTCCAACAACTTGATTCTGTTTGC...AAACTGTTGGGATTTTTGAGAAGACTCGAGACATTGAATTAAGATTCTGTGTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR TCA 90 bp | GAAAGCCTCAGTACACTGCCTCATTCCACATGGCAGGAACTGGTGTCGGACAGGGCCCCACGAAGGAGGTaGGGAAGTAGAAGAAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ESLSTLPHSTWQELVSDRAPRRR*GSRRRC Trigger: ACACCTTCTTCTACTTCCTCACCTCCTTCGTGGGGC...CCTGTCCGACACCAGTTCCTGCCATGTGGAATGAGGCAGTGTACTGAGGCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR TCA 90 bp | GCACAGCTCTGGCTGTTCATCTCTGCTCACCTGACACAGCTGACTCCCTCCCTCTTCTGCTGCTTTGCCTaGGGTAAGGGTACAGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AQLWLFISAHLTQLTPSLFCCFA*GKGTVV Trigger: CACAACTGTACCCTTACCTCAGGCAAAGCAGCAGAA...GAGGGAGGGAGTCAGCTGTGTCAGGTGAGCAGAGATGAACAGCCAGAGCTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR TCA 90 bp | GCACAGCTCTGGCTGTTCATCTCTGCTCACCTGACACAGCTGACTCCCTCCCTCACAGGCTTGGCCTCATaGACTTCCAACTTCAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AQLWLFISAHLTQLTPSLTGLAS*TSNFSG Trigger: ACCACTGAAGTTGGAAGTTCATGAGGCCAAGCCTGT...GAGGGAGGGAGTCAGCTGTGTCAGGTGAGCAGAGATGAACAGCCAGAGCTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR TCA 90 bp | GCACAGCTCTGGCTGTTCATCTCTGCTCACCTGACACAGCTGACTCCCTCCCTCAGGGTGTGTTATCTTTaGCTTGGTCTCCAGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AQLWLFISAHLTQLTPSLRVCYL*LGLQKS Trigger: GCTCTTCTGGAGACCAAGTCAAAGATAACACACCCT...GAGGGAGGGAGTCAGCTGTGTCAGGTGAGCAGAGATGAACAGCCAGAGCTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR TCA 90 bp | AGCAGGACAGTACCACTCAACAGCCTGTTCTTCTCCACCCCTAGGGCATGCTGGTCCACTATATCGTATTaGCCGATACCACCAAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRTVPLNSLFFSTPRACWSTISY*PIPPRA Trigger: GGCTCTTGGTGGTATCGGTCAATACGATATAGTGGA...CCAGCATGCCCTAGGGGTGGAGAAGAACAGGCTGTTGAGTGGTACTGTCCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR GCA 90 bp | TCAGTACACTGCCTCATTCCACATGGCAGGAACTGGTGTCGGACAGGCCCGAACCCTTTGTTCTTCTGCTaGCATCCTCCTTTTGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SVHCLIPHGRNWCRTGPNPLFFC*HPPFAL Trigger: CAAGGCAAAAGGAGGATGGCAGCAGAAGAACAAAGG...GTTCGGGCCTGTCCGACACCAGTTCCTGCCATGTGGAATGAGGCAGTGTACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR CCA 90 bp | GCACAGCTCTGGCTGTTCATCTCTGCTCACCTGACACAGCTGACTCCCTCCCTCAGCTTGAGGCCCATCTaGATTTCCAAATTCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AQLWLFISAHLTQLTPSLSLRPI*ISKFFP Trigger: TGGGAAGAATTTGGAAATCCAGATGGGCCTCAAGCT...GAGGGAGGGAGTCAGCTGTGTCAGGTGAGCAGAGATGAACAGCCAGAGCTGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| 3UTR CAA 72 bp | CTTTCAGAGGGCAAAGAGCCACTAGAGAAGCGGTCCTaGAGCCTGGCTCCCTCAGGAAAACTAGGAAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSEGKEPLEKRS*SLAPSGKLGNV Trigger: CACATTTCCTAGTTTTCCTGAGGGAGCCAGGCTCAAGGACCGCTTCTCTAGTGGCTCTTTGCCCTCTGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR TCA 90 bp | GCACAGCTCTGGCTGTTCATCTCTGCTCACCTGACACAGCTGACTCCCTCCCTCATCATCCAAGACCTGTaGTTTTATGTCCATGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AQLWLFISAHLTQLTPSLIIQDL*FYVHGH Trigger: GTGACCATGGACATAAAATCACAGGTCTTGGATGAT...GAGGGAGGGAGTCAGCTGTGTCAGGTGAGCAGAGATGAACAGCCAGAGCTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR CCA 90 bp | ATCAGCCCTCACTGCTGCTGCTTTATGACCTCTCACAGAGCAGCAATGTTTGCAGGCCTTCAGGCTGTATaGACAGGTGAGTGGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISPHCCCFMTSHRAAMFAGLQAV*TGEWRF Trigger: GAACCTCCACTCACCTGTCCATACAGCCTGAAGGCC...TGCAAACATTGCTGCTCTGTGAGAGGTCATAAAGCAGCAGCAGTGAGGGCTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR CCA 90 bp | TCAGTACACTGCCTCATTCCACATGGCAGGAACTGGTGTCGGACAGGCCCGAACACAGTAAAAGAACTCTaGCCTTCAGGCTGTATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SVHCLIPHGRNWCRTGPNTVKEL*PSGCMD Trigger: GTCCATACAGCCTGAAGGCCAGAGTTCTTTTACTGT...GTTCGGGCCTGTCCGACACCAGTTCCTGCCATGTGGAATGAGGCAGTGTACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR TCA 90 bp | GAAAGCCTCAGTACACTGCCTCATTCCACATGGCAGGAACTGGTGTCGGACAGGATCCTCCTTTTGCCTTaGTCTTGTTGGCATCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: ESLSTLPHSTWQELVSDRILLLP*SCWHHS Trigger: AGAGTGATGCCAACAAGATCAAGGCAAAAGGAGGAT...CCTGTCCGACACCAGTTCCTGCCATGTGGAATGAGGCAGTGTACTGAGGCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR TCA 90 bp | GCACAGCTCTGGCTGTTCATCTCTGCTCACCTGACACAGCTGACTCCCTCCCTCACATTAACCATTTCTTaGAGCAGAGCAGGACATTTT | + |
|
Preference number: 4 (lower is better) Translates to: AQLWLFISAHLTQLTPSLTLTIS*SRAGHF Trigger: AAAATGTCCTGCTCTGCTTCAAGAAATGGTTAATGT...GAGGGAGGGAGTCAGCTGTGTCAGGTGAGCAGAGATGAACAGCCAGAGCTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR GCA 90 bp | TCAGCCTTCGCACCTGCCACACTTTCCACTAGCAGGAAGACCCCTTGTGGAAAGAGCTGCATATGCTTTTaGTATCCTCATGAACATGAC | + |
|
Preference number: 4 (lower is better) Translates to: SAFAPATLSTSRKTPCGKSCICF*YPHEHD Trigger: GTCATGTTCATGAGGATAGCAAAAGCATATGCAGCT...CTTTCCACAAGGGGTCTTCCTGCTAGTGGAAAGTGTGGCAGGTGCGAAGGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR CCA 90 bp | TCAGTACACTGCCTCATTCCACATGGCAGGAACTGGTGTCGGACAGGCCCGAACAGAATTGAATTTTTCTaGTCAACTATCCAAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SVHCLIPHGRNWCRTGPNRIEFF*STIQAG Trigger: GCCAGCTTGGATAGTTGACCAGAAAAATTCAATTCT...GTTCGGGCCTGTCCGACACCAGTTCCTGCCATGTGGAATGAGGCAGTGTACTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR CCA 90 bp | TCAGCCTTCGCACCTGCCACACTTTCCACTAGCAGGAAGACCCCTTGTGGAAAGATTTGGGCATTTTCTTaGGTCCTTTGTTCTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SAFAPATLSTSRKTPCGKIWAFS*VLCSSA Trigger: AGCAGAAGAACAAAGGACCCAAGAAAATGCCCAAAT...CTTTCCACAAGGGGTCTTCCTGCTAGTGGAAAGTGTGGCAGGTGCGAAGGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR CCA 90 bp | TCAGTACACTGCCTCATTCCACATGGCAGGAACTGGTGTCGGACAGGCCCGAACGTACGTATTAGAATCTaGTCTCCACTATATCGTATT | + |
|
Preference number: 4 (lower is better) Translates to: SVHCLIPHGRNWCRTGPNVRIRI*SPLYRI Trigger: AATACGATATAGTGGAGACCAGATTCTAATACGTAC...GTTCGGGCCTGTCCGACACCAGTTCCTGCCATGTGGAATGAGGCAGTGTACTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR GCA 90 bp | ATCAGCCCTCACTGCTGCTGCTTTATGACCTCTCACAGAGCAGCAATGTTTGCAGAACAGTGCCCATCCTaGAAGCAGAACTATTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ISPHCCCFMTSHRAAMFAEQCPS*KQNYFL Trigger: AAGAAAATAGTTCTGCTTGCAGGATGGGCACTGTTC...TGCAAACATTGCTGCTCTGTGAGAGGTCATAAAGCAGCAGCAGTGAGGGCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR CCA 90 bp | GAAAGCCTCAGTACACTGCCTCATTCCACATGGCAGGAACTGGTGTCGGACAGGATTCTCGGTCTGTTTTaGAAACTTTGTATGCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ESLSTLPHSTWQELVSDRILGLF*KLCMQE Trigger: TTCTTGCATACAAAGTTTCCAAAACAGACCGAGAAT...CCTGTCCGACACCAGTTCCTGCCATGTGGAATGAGGCAGTGTACTGAGGCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR TCA 90 bp | AATGAGAGAGAAGAGTTCTTCCTCCTGGGCTTTCCAAGAGTAGACAGAGATAGCGCCCATATAGGAGTCTaGTCTCAGGAACACTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: NEREEFFLLGFPRVDRDSAHIGV*SQEHCI Trigger: TATACAGTGTTCCTGAGATCAGACTCCTATATGGGC...GCTATCTCTGTCTACTCTTGGAAAGCCCAGGAGGAAGAACTCTTCTCTCTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| 3UTR CAA 72 bp | AATCCTCACCAGAGACTCTCAAGCCAGAGAAGCCAGTaGTTTGAACAGTCTGTATACCTTTCAGAGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NPHQRLSSQRSQ*FEQSVYLSEGK Trigger: TTTGCCCTCTGAAAGGTATACAGACTGTTCAAACAACTGGCTTCTCTGGCTTGAGAGTCTCTGGTGAGGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR TCA 90 bp | TCTTCTCAAAAATCCCAACAGTTTAGAGACTGCGAACATCTGCTTTTGGGTCTGTCCCAAGGACCGCCATaGCCTCTTCATACTTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSQKSQQFRDCEHLLLGLSQGPP*PLHTFH Trigger: ATGAAAAGTATGAAGAGGTCATGGCGGTCCTTGGGA...CAGACCCAAAAGCAGATGTTCGCAGTCTCTAAACTGTTGGGATTTTTGAGAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR GCA 90 bp | AATACAAAAGTGCCTCCTTTGTATGCTGTAGTTACTGTCTTCAGAAGGCTTCGGCTGCCATCCTCCTTTTaGCTTGATCTTGTTGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: NTKVPPLYAVVTVFRRLRLPSSF*LDLVGI Trigger: GATGCCAACAAGATCAAGGCAAAAGGAGGATGGCAG...CCGAAGCCTTCTGAAGACAGTAACTACAGCATACAAAGGAGGCACTTTTGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR GCA 90 bp | CATCTCAAGACACACTTAGCTAACCACTGCACAGCTGGTAAAATGTCATGCTTCCCTCTTCAGAATCACTaGCCTTGTCAGAAATGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: HLKTHLANHCTAGKMSCFPLQNH*PCQKCR Trigger: ACGACATTTCTGACAAGGGCAGTGATTCTGAAGAGG...GAAGCATGACATTTTACCAGCTGTGCAGTGGTTAGCTAAGTGTGTCTTGAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR CCA 90 bp | AATGAGAGAGAAGAGTTCTTCCTCCTGGGCTTTCCAAGAGTAGACAGAGATAGCGTCAACTATCCAAGCTaGCAAAGCAATTCCAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NEREEFFLLGFPRVDRDSVNYPS*QSNSKA Trigger: AGCTTTGGAATTGCTTTGCCAGCTTGGATAGTTGAC...GCTATCTCTGTCTACTCTTGGAAAGCCCAGGAGGAAGAACTCTTCTCTCTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR CCA 90 bp | CTAACCACTGCACAGCTGGTAAAATGTCATGCTTCGGTTCACTGGTCGTTGTTTGTGATTTTATGTCCATaGTCACATACGGGAAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LTTAQLVKCHASVHWSLFVILCP*SHTGNS Trigger: GGAGTTTCCCGTATGTGACCATGGACATAAAATCAC...AAACAACGACCAGTGAACCGAAGCATGACATTTTACCAGCTGTGCAGTGGTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR CCA 90 bp | AATGAGAGAGAAGAGTTCTTCCTCCTGGGCTTTCCAAGAGTAGACAGAGATAGCGTGTTATCTTTGACTTaGTCTCCAGAAGAGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NEREEFFLLGFPRVDRDSVLSLT*SPEELS Trigger: AGAGAGCTCTTCTGGAGACCAAGTCAAAGATAACAC...GCTATCTCTGTCTACTCTTGGAAAGCCCAGGAGGAAGAACTCTTCTCTCTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR CCA 90 bp | TCTTCTCAAAAATCCCAACAGTTTAGAGACTGCGAACATCTGCTTTTGGGTCTGCCTTCACTGTCTTCCTaGTCTTCGTCACCTTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: SSQKSQQFRDCEHLLLGLPSLSS*SSSPSI Trigger: GATAGAAGGTGACGAAGACCAGGAAGACAGTGAAGG...CAGACCCAAAAGCAGATGTTCGCAGTCTCTAAACTGTTGGGATTTTTGAGAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR TCA 90 bp | CATCTCAAGACACACTTAGCTAACCACTGCACAGCTGGTAAAATGTCATGCTTCCCTCCTTTATCTGGATaGTATTTAAGTGACAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: HLKTHLANHCTAGKMSCFPPLSG*YLSDNK Trigger: CTTGTTGTCACTTAAATATCATCCAGATAAAGGAGG...GAAGCATGACATTTTACCAGCTGTGCAGTGGTTAGCTAAGTGTGTCTTGAGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR TCA 90 bp | CATCTCAAGACACACTTAGCTAACCACTGCACAGCTGGTAAAATGTCATGCTTCTTCATTCTAGCAAGATaGGACAGTAAAAGAACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HLKTHLANHCTAGKMSCFFILAR*DSKRTL Trigger: CAGAGTTCTTTTACTGTCTCATCTTGCTAGAATGAA...GAAGCATGACATTTTACCAGCTGTGCAGTGGTTAGCTAAGTGTGTCTTGAGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR GCA 90 bp | ACACACAGAATCTTAATTCAATGTCTCGAGTCTTCTCAAAAATCCCAACAGTTTGATAATTTCCAGGCTTaGCGGGTGCGGGAAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: THRILIQCLESSQKSQQFDNFQA*RVRETS Trigger: TGAAGTTTCCCGCACCCGGCAAGCCTGGAAATTATC...AAACTGTTGGGATTTTTGAGAAGACTCGAGACATTGAATTAAGATTCTGTGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| 3UTR CAA 72 bp | CTCAGTAACAGGATAATGTACAAGGTGGCATCTGTTTaGTTTGTTAAGGTTTGTAAAATAGCCCTAGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSNRIMYKVASV*FVKVCKIALVS Trigger: TGACACTAGGGCTATTTTACAAACCTTAACAAACAAAACAGATGCCACCTTGTACATTATCCTGTTACTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR TCA 90 bp | ACACACAGAATCTTAATTCAATGTCTCGAGTCTTCTCAAAAATCCCAACAGTTTTGCTGCCAATTTCCCTaGTTAGCTGTGGTATTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: THRILIQCLESSQKSQQFCCQFP*LAVVLK Trigger: TTTTAATACCACAGCTAATCAGGGAAATTGGCAGCA...AAACTGTTGGGATTTTTGAGAAGACTCGAGACATTGAATTAAGATTCTGTGTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR CCA 90 bp | ACACACAGAATCTTAATTCAATGTCTCGAGTCTTCTCAAAAATCCCAACAGTTTCTGTTGGCCTGCTTGTaGAATCTTTATTATACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: THRILIQCLESSQKSQQFLLACL*NLYYTE Trigger: CTCAGTATAATAAAGATTCCACAAGCAGGCCAACAG...AAACTGTTGGGATTTTTGAGAAGACTCGAGACATTGAATTAAGATTCTGTGTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR CAA 90 bp | GAAAGCCTCAGTACACTGCCTCATTCCACATGGCAGGAACTGGTGTCGGACAGGCCTTTTGCCTTGATCTaGTTGGCATCACTCTGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: ESLSTLPHSTWQELVSDRPFALI*LASLCP Trigger: CGGGCAGAGTGATGCCAACAAGATCAAGGCAAAAGG...CCTGTCCGACACCAGTTCCTGCCATGTGGAATGAGGCAGTGTACTGAGGCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR CAA 90 bp | AGCAGGACAGTACCACTCAACAGCCTGTTCTTCTCCACCCCTAGGGCATGCTGGCTCCACTATATCGTATaGACCGATACCACCAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SRTVPLNSLFFSTPRACWLHYIV*TDTTKS Trigger: GCTCTTGGTGGTATCGGTCAATACGATATAGTGGAG...CCAGCATGCCCTAGGGGTGGAGAAGAACAGGCTGTTGAGTGGTACTGTCCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR CAA 90 bp | TCAGCCTTCGCACCTGCCACACTTTCCACTAGCAGGAAGACCCCTTGTGGAAAGCATCCTCCTTTTGCCTaGATCTTGTTGGCATCACTC | + |
|
Preference number: 5 (lower is better) Translates to: SAFAPATLSTSRKTPCGKHPPFA*ILLASL Trigger: GAGTGATGCCAACAAGATCAAGGCAAAAGGAGGATG...CTTTCCACAAGGGGTCTTCCTGCTAGTGGAAAGTGTGGCAGGTGCGAAGGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR CAA 90 bp | TCAGTACACTGCCTCATTCCACATGGCAGGAACTGGTGTCGGACAGGCCCGAACGATTTGGGCATTTTCTaGGGTCCTTTGTTCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SVHCLIPHGRNWCRTGPNDLGIF*GPLFFC Trigger: GCAGAAGAACAAAGGACCCAAGAAAATGCCCAAATC...GTTCGGGCCTGTCCGACACCAGTTCCTGCCATGTGGAATGAGGCAGTGTACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR CAA 90 bp | GAAAGCCTCAGTACACTGCCTCATTCCACATGGCAGGAACTGGTGTCGGACAGGTCCATTTGCTTGCTTTaGCTTCTGCTGCTTTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ESLSTLPHSTWQELVSDRSICLL*LLLLCL Trigger: CAGGCAAAGCAGCAGAAGCAAAAGCAAGCAAATGGA...CCTGTCCGACACCAGTTCCTGCCATGTGGAATGAGGCAGTGTACTGAGGCTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR CAA 90 bp | TCAGTACACTGCCTCATTCCACATGGCAGGAACTGGTGTCGGACAGGCCCGAACTTTCAGCATGAACTGTaGATCTTCTTCCAGTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SVHCLIPHGRNWCRTGPNFQHEL*IFFQCL Trigger: GAGACACTGGAAGAAGATCAACAGTTCATGCTGAAA...GTTCGGGCCTGTCCGACACCAGTTCCTGCCATGTGGAATGAGGCAGTGTACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR CAA 90 bp | ATCAGCCCTCACTGCTGCTGCTTTATGACCTCTCACAGAGCAGCAATGTTTGCATCCAAAGCTTGTAGCTaGAGGCCCATCTGGATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ISPHCCCFMTSHRAAMFASKACS*RPIWIS Trigger: GGAAATCCAGATGGGCCTCAAGCTACAAGCTTTGGA...TGCAAACATTGCTGCTCTGTGAGAGGTCATAAAGCAGCAGCAGTGAGGGCTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR CAA 90 bp | GCACAGCTCTGGCTGTTCATCTCTGCTCACCTGACACAGCTGACTCCCTCCCTCTATCTGTTGGCCTGCTaGTGGAATCTTTATTATACT | + |
|
Preference number: 5 (lower is better) Translates to: AQLWLFISAHLTQLTPSLYLLAC*WNLYYT Trigger: AGTATAATAAAGATTCCACAAGCAGGCCAACAGATA...GAGGGAGGGAGTCAGCTGTGTCAGGTGAGCAGAGATGAACAGCCAGAGCTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR CAA 90 bp | GAAAGCCTCAGTACACTGCCTCATTCCACATGGCAGGAACTGGTGTCGGACAGGTATTCTCGGTCTGTTTaGGAAACTTTGTATGCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: ESLSTLPHSTWQELVSDRYSRSV*ETLYAR Trigger: TCTTGCATACAAAGTTTCCAAAACAGACCGAGAATA...CCTGTCCGACACCAGTTCCTGCCATGTGGAATGAGGCAGTGTACTGAGGCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR CAA 90 bp | TCAGCCTTCGCACCTGCCACACTTTCCACTAGCAGGAAGACCCCTTGTGGAAAGTACATTAACCATTTCTaGAAGCAGAGCAGGACATTT | + |
|
Preference number: 5 (lower is better) Translates to: SAFAPATLSTSRKTPCGKYINHF*KQSRTF Trigger: AAATGTCCTGCTCTGCTTCAAGAAATGGTTAATGTA...CTTTCCACAAGGGGTCTTCCTGCTAGTGGAAAGTGTGGCAGGTGCGAAGGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS GCA 90 bp | AGGAGTCTGATCTCAGGAACACTGTATACTGATAATTTCCAGGCTTaGCGGGTGCGGGAAACTTCAGTTCTACCTCTTCTGTATCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RSLISGTLYTDNFQA*RVRETSVLPLLYPS Trigger: TGAAGGATACAGAAGAGGTAGAACTGAAGTTTCCCGCACCCGGCAAGCCTGGAAATTATCAGTATACAGTGTTCCTGAGATCAGACTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
||
| CDS-3UTR CAA 90 bp | CATCTCAAGACACACTTAGCTAACCACTGCACAGCTGGTAAAATGTCATGCTTCTCAGAATCACTGCCCTaGTCAGAAATGTCGTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: HLKTHLANHCTAGKMSCFSESLP*SEMSSS Trigger: AGAAGACGACATTTCTGACAAGGGCAGTGATTCTGA...GAAGCATGACATTTTACCAGCTGTGCAGTGGTTAGCTAAGTGTGTCTTGAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| CDS-3UTR CAA 90 bp | AATACAAAAGTGCCTCCTTTGTATGCTGTAGTTACTGTCTTCAGAAGGCTTCGGCAGGGTGTGTTATCTTaGACTTGGTCTCCAGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: NTKVPPLYAVVTVFRRLRQGVLS*TWSPEE Trigger: CTCTTCTGGAGACCAAGTCAAAGATAACACACCCTG...CCGAAGCCTTCTGAAGACAGTAACTACAGCATACAAAGGAGGCACTTTTGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| CDS TCA 90 bp | GATGAGACAGTAAAAGAACTCTGGCCTTCAGGCTGTATGGACAGGTaGGTGGAGGTTCATTCTTCTTTAAATTTATGCTGCCAATTTCCC | + |
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Preference number: 5 (lower is better) Translates to: DETVKELWPSGCMDR*VEVHSSLNLCCQFP Trigger: GGGAAATTGGCAGCATAAATTTAAAGAAGAATGAACCTCCACTCACCTGTCCATACAGCCTGAAGGCCAGAGTTCTTTTACTGTCTCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| CDS-3UTR CAA 90 bp | TCTTCTCAAAAATCCCAACAGTTTAGAGACTGCGAACATCTGCTTTTGGGTCTGCTTCTTCCTCCTTTATaGCAGCTTCACTCCCAACAA | + |
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Preference number: 5 (lower is better) Translates to: SSQKSQQFRDCEHLLLGLLLPPL*QLHSQQ Trigger: TTGTTGGGAGTGAAGCTGCAATAAAGGAGGAAGAAG...CAGACCCAAAAGCAGATGTTCGCAGTCTCTAAACTGTTGGGATTTTTGAGAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| CDS TCA 90 bp | TTTGCTATCCTCATGAACATGACTTCATCACCTCCTTTATCTGGATaGTATTTAAGTGACAACAAGCGATACTGTTTCTTAATTTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: FAILMNMTSSPPLSG*YLSDNKRYCFLISA Trigger: GGCAGAAATTAAGAAACAGTATCGCTTGTTGTCACTTAAATATCATCCAGATAAAGGAGGTGATGAAGTCATGTTCATGAGGATAGCAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| CDS CCA 90 bp | CCTGCAAGCAGAACTATTTTCTTTACTGTAGGAATAATATTTGGCTaGGGTTTTAATAACCGTAAACGATACCACATACATCTTCCATAT | + |
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Preference number: 5 (lower is better) Translates to: PASRTIFFTVGIIFG*GFNNRKRYHIHLPY Trigger: ATATGGAAGATGTATGTGGTATCGTTTACGGTTATTAAAACCCCAGCCAAATATTATTCCTACAGTAAAGAAAATAGTTCTGCTTGCAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| CDS GCA 72 bp | CATCCTCCTTTTGCCTTGATCTTGTTGGCATCACTCTaGCCGTCTTCTGTGGGCTGCTCCTCAGCGGCGCAG | + |
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Preference number: 6 (lower is better) Translates to: HPPFALILLASL*PSSVGCSSAAQ Trigger: CTGCGCCGCTGAGGAGCAGCCCACAGAAGACGGGCAGAGTGATGCCAACAAGATCAAGGCAAAAGGAGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| CDS GCA 72 bp | GAACACTGTATACTGATAATTTCCAGGCTTGCCGGGTaGGGGAAACTTCAGTTCTACCTCTTCTGTATCCTT | + |
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Preference number: 6 (lower is better) Translates to: EHCILIISRLAG*GKLQFYLFCIL Trigger: AAGGATACAGAAGAGGTAGAACTGAAGTTTCCCGCACCCGGCAAGCCTGGAAATTATCAGTATACAGTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| CDS TCA 72 bp | AGGAAAGTAGAGACTATAGACAGGGTGTGTTATCTTTaGCTTGGTCTCCAGAAGAGCTCTCTCTTTCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: RKVETIDRVCYL*LGLQKSSLFPL Trigger: CAGAGGAAAGAGAGAGCTCTTCTGGAGACCAAGTCAAAGATAACACACCCTGTCTATAGTCTCTACTTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| CDS CAA 72 bp | TTGTACGTATTAGAATCTGGTCTCCACTATATCGTATaGACCGATACCACCAAGAGCCCACCACAACAGGAA | + |
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Preference number: 6 (lower is better) Translates to: LYVLESGLHYIV*TDTTKSPPQQE Trigger: TTCCTGTTGTGGTGGGCTCTTGGTGGTATCGGTCAATACGATATAGTGGAGACCAGATTCTAATACGTACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| CDS CAA 72 bp | CAGGAAAGTAGAGACTATAGACAGGGTGTGTTATCTTaGACTTGGTCTCCAGAAGAGCTCTCTCTTTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: QESRDYRQGVLS*TWSPEELSLSS Trigger: AGAGGAAAGAGAGAGCTCTTCTGGAGACCAAGTCAAAGATAACACACCCTGTCTATAGTCTCTACTTTCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| CDS TCA 72 bp | TCTTCCAGTGTCTCAGGAATTTTCATTCTAGCAAGATaGGACAGTAAAAGAACTCTGGCCTTCAGGCTGTAT | + |
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Preference number: 6 (lower is better) Translates to: SSSVSGIFILAR*DSKRTLAFRLY Trigger: ATACAGCCTGAAGGCCAGAGTTCTTTTACTGTCTCATCTTGCTAGAATGAAAATTCCTGAGACACTGGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| CDS TCA 72 bp | GACTTCATCACCTCCTTTATCTGGATGATATTTAAGTaGCAACAAGCGATACTGTTTCTTAATTTCTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: DFITSFIWMIFK*QQAILFLNFCH Trigger: GTGGCAGAAATTAAGAAACAGTATCGCTTGTTGTCACTTAAATATCATCCAGATAAAGGAGGTGATGAAGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| CDS TCA 72 bp | CTCATGAACATGACTTCATCACCTCCTTTATCTGGATaGTATTTAAGTGACAACAAGCGATACTGTTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: LMNMTSSPPLSG*YLSDNKRYCFL Trigger: TAAGAAACAGTATCGCTTGTTGTCACTTAAATATCATCCAGATAAAGGAGGTGATGAAGTCATGTTCATGAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| CDS CCA 72 bp | GCTGTGGTATTAAAATATTATCTGTTGGCCTGCTTGTaGAATCTTTATTATACTGAGGGTCAAATTCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: AVVLKYYLLACL*NLYYTEGQIQK Trigger: CTTCTGAATTTGACCCTCAGTATAATAAAGATTCCACAAGCAGGCCAACAGATAATATTTTAATACCACAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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| CDS CAA 72 bp | TTAGCTGTGGTATTAAAATATTATCTGTTGGCCTGCTaGTGGAATCTTTATTATACTGAGGGTCAAATTCAG | + |
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Preference number: 6 (lower is better) Translates to: LAVVLKYYLLAC*WNLYYTEGQIQ Trigger: CTGAATTTGACCCTCAGTATAATAAAGATTCCACAAGCAGGCCAACAGATAATATTTTAATACCACAGCTAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019937.5 |
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