Pregenerated sensors for SEC61G (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078974Ensembl transcript IDs: ENSMUST00000109641.2, ENSMUST00000109642.8, ENSMUST00000109643.8, ENSMUST00000166950.8, ENSMUST00000178855.8
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTGCTAGCTGTCCATTTCCTGCTCTCTCAGGCACAATCAAAGTATaGGTTGGCAACAAGTCCTTTGCAGGATGCTGGAACCTGAACACT | + |
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Preference number: 1 (lower is better) Translates to: AASCPFPALSGTIKV*VGNKSFAGCWNLNT Trigger: AGTGTTCAGGTTCCAGCATCCTGCAAAGGACTTGTTGCCAACTCATACTTTGATTGTGCCTGAGAGAGCAGGAAATGGACAGCTAGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109643.8 |
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| 3UTR TCA 90 bp | AACCTGCTGGCACTGCTACACTTGGCTTTCATGGCTCTCAGGATGTaGAAAGGGAATCCTCTCCCTACAAACTACTCAGCTTCGAGTTAT | + |
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Preference number: 1 (lower is better) Translates to: NLLALLHLAFMALRM*KGNPLPTNYSASSY Trigger: ATAACTCGAAGCTGAGTAGTTTGTAGGGAGAGGATTCCCTTTTCACATCCTGAGAGCCATGAAAGCCAAGTGTAGCAGTGCCAGCAGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109642.8 ENSMUST00000109643.8 |
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| 3UTR TCA 90 bp | AAATTCAGAATCAATAAACTCAGAACGGTGATATTCACGGAGGTGTaGCTGGTTAGCACTTTGTGGGGAAAGACGTTCACTTCCAGACTT | + |
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Preference number: 1 (lower is better) Translates to: KFRINKLRTVIFTEV*LVSTLWGKTFTSRL Trigger: AAGTCTGGAAGTGAACGTCTTTCCCCACAAAGTGCTAACCAGTCACACCTCCGTGAATATCACCGTTCTGAGTTTATTGATTCTGAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109643.8 |
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| 3UTR TCA 90 bp | TCAAAGTATGAGTTGGCAACAAGTCCTTTGCAGGATGCTGGAACCTaGACACTGTTCCCAATGTTCAGAACTCTTAAGTTTTTAGTAAGT | + |
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Preference number: 1 (lower is better) Translates to: SKYELATSPLQDAGT*TLFPMFRTLKFLVS Trigger: ACTTACTAAAAACTTAAGAGTTCTGAACATTGGGAACAGTGTTCAGGTTCCAGCATCCTGCAAAGGACTTGTTGCCAACTCATACTTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109643.8 |
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| 3UTR GCA 90 bp | TTAACCAGATTTTCAGAAAGCTGCTTCAAATATCACCTCAACTGCTaGATTATCTGTCTACAATTTAAGTGCAATGTGGACAAAATCACT | + |
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Preference number: 1 (lower is better) Translates to: LTRFSESCFKYHLNC*IICLQFKCNVDKIT Trigger: AGTGATTTTGTCCACATTGCACTTAAATTGTAGACAGATAATGCAGCAGTTGAGGTGATATTTGAAGCAGCTTTCTGAAAATCTGGTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109643.8 |
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| 3UTR GCA 90 bp | ACTTTAACCAGATTTTCAGAAAGCTGCTTCAAATATCACCTCAACTaGTGCATTATCTGTCTACAATTTAAGTGCAATGTGGACAAAATC | + |
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Preference number: 1 (lower is better) Translates to: TLTRFSESCFKYHLN*CIICLQFKCNVDKI Trigger: GATTTTGTCCACATTGCACTTAAATTGTAGACAGATAATGCAGCAGTTGAGGTGATATTTGAAGCAGCTTTCTGAAAATCTGGTTAAAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109643.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCCCATCATTTACCCACTGTTTCTACTACAGCAGAACATCTCAGAAAATGCTAGGCAGAAAAGCATCTaGATTTACAATGTTTCAGCA | + |
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Preference number: 2 (lower is better) Translates to: FPIIYPLFLLQQNISENARQKSI*IYNVSA Trigger: TGCTGAAACATTGTAAATTCAGATGCTTTTCTGCCT...AGCATTTTCTGAGATGTTCTGCTGTAGTAGAAACAGTGGGTAAATGATGGGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109643.8 |
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| 3UTR TCA 72 bp | GCACTGCTACACTTGGCTTTCATGGCTCTCAGGATGTaGAAAGGGAATCCTCTCCCTACAAACTACTCAGCT | + |
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Preference number: 3 (lower is better) Translates to: ALLHLAFMALRM*KGNPLPTNYSA Trigger: AGCTGAGTAGTTTGTAGGGAGAGGATTCCCTTTTCACATCCTGAGAGCCATGAAAGCCAAGTGTAGCAGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109642.8 ENSMUST00000109643.8 |
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| 3UTR CCA 72 bp | TTGGGTCACACAGGGTCCTCCTTACCTGAGGGATTATaGCCACTATTAAAGCCTCTTCGTACATCTCCTTGT | + |
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Preference number: 3 (lower is better) Translates to: LGHTGSSLPEGL*PLLKPLRTSPC Trigger: ACAAGGAGATGTACGAAGAGGCTTTAATAGTGGCCATAATCCCTCAGGTAAGGAGGACCCTGTGTGACCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109643.8 |
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| 3UTR TCA 72 bp | TGTCCATTTCCTGCTCTCTCAGGCACAATCAAAGTATaGGTTGGCAACAAGTCCTTTGCAGGATGCTGGAAC | + |
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Preference number: 3 (lower is better) Translates to: CPFPALSGTIKV*VGNKSFAGCWN Trigger: GTTCCAGCATCCTGCAAAGGACTTGTTGCCAACTCATACTTTGATTGTGCCTGAGAGAGCAGGAAATGGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109643.8 |
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| 3UTR GCA 72 bp | AGGCACAATCAAAGTATGAGTTGGCAACAAGTCCTTTaGAGGATGCTGGAACCTGAACACTGTTCCCAATGT | + |
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Preference number: 3 (lower is better) Translates to: RHNQSMSWQQVL*RMLEPEHCSQC Trigger: ACATTGGGAACAGTGTTCAGGTTCCAGCATCCTGCAAAGGACTTGTTGCCAACTCATACTTTGATTGTGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109643.8 |
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| 3UTR CCA 72 bp | ATTTCCTGCTCTCTCAGGCACAATCAAAGTATGAGTTaGCAACAAGTCCTTTGCAGGATGCTGGAACCTGAA | + |
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Preference number: 3 (lower is better) Translates to: ISCSLRHNQSMS*QQVLCRMLEPE Trigger: TTCAGGTTCCAGCATCCTGCAAAGGACTTGTTGCCAACTCATACTTTGATTGTGCCTGAGAGAGCAGGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109643.8 |
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| 3UTR TCA 72 bp | ATCAATAAACTCAGAACGGTGATATTCACGGAGGTGTaGCTGGTTAGCACTTTGTGGGGAAAGACGTTCACT | + |
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Preference number: 3 (lower is better) Translates to: INKLRTVIFTEV*LVSTLWGKTFT Trigger: AGTGAACGTCTTTCCCCACAAAGTGCTAACCAGTCACACCTCCGTGAATATCACCGTTCTGAGTTTATTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109643.8 |
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| 3UTR GCA 72 bp | CACCTCAACTGCTGCATTATCTGTCTACAATTTAAGTaGAATGTGGACAAAATCACTATCCTACCTCAAAAG | + |
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Preference number: 3 (lower is better) Translates to: HLNCCIICLQFK*NVDKITILPQK Trigger: CTTTTGAGGTAGGATAGTGATTTTGTCCACATTGCACTTAAATTGTAGACAGATAATGCAGCAGTTGAGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109643.8 |
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| 3UTR GCA 72 bp | TTTTCAGAAAGCTGCTTCAAATATCACCTCAACTGCTaGATTATCTGTCTACAATTTAAGTGCAATGTGGAC | + |
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Preference number: 3 (lower is better) Translates to: FSESCFKYHLNC*IICLQFKCNVD Trigger: GTCCACATTGCACTTAAATTGTAGACAGATAATGCAGCAGTTGAGGTGATATTTGAAGCAGCTTTCTGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109643.8 |
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| 3UTR GCA 72 bp | AGATTTTCAGAAAGCTGCTTCAAATATCACCTCAACTaGTGCATTATCTGTCTACAATTTAAGTGCAATGTG | + |
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Preference number: 3 (lower is better) Translates to: RFSESCFKYHLN*CIICLQFKCNV Trigger: CACATTGCACTTAAATTGTAGACAGATAATGCAGCAGTTGAGGTGATATTTGAAGCAGCTTTCTGAAAATCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109643.8 |
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| 3UTR CCA 72 bp | ACTGCTGCATTATCTGTCTACAATTTAAGTGCAATGTaGACAAAATCACTATCCTACCTCAAAAGTAATGGT | + |
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Preference number: 3 (lower is better) Translates to: TAALSVYNLSAM*TKSLSYLKSNG Trigger: ACCATTACTTTTGAGGTAGGATAGTGATTTTGTCCACATTGCACTTAAATTGTAGACAGATAATGCAGCAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109643.8 |
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| CDS-3UTR CCA 90 bp | ATTCAGGCAACGCTTTACTTCATGCCCTTTCCCCCGCTCTGGCTCACTCGTCCCAACGGAACCGGAAGCTaGCAACCCACAGCCCGCCCA | + |
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Preference number: 4 (lower is better) Translates to: IQATLYFMPFPPLWLTRPNGTGS*QPTARP Trigger: TGGGCGGGCTGTGGGTTGCCAGCTTCCGGTTCCGTT...GGGACGAGTGAGCCAGAGCGGGGGAAAGGGCATGAAGTAAAGCGTTGCCTGAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166950.8 |
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| CDS-3UTR CCA 90 bp | CCACACAGCATTCAGGCAACGCTTTACTTCATGCCCTTTCCCCCGCTCTGGCTCGCCATGGCAATCTTCTaGAATTCTTTTCTGTCGGGT | + |
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Preference number: 4 (lower is better) Translates to: PHSIQATLYFMPFPPLWLAMAIF*NSFLSG Trigger: ACCCGACAGAAAAGAATTCCAGAAGATTGCCATGGC...GAGCCAGAGCGGGGGAAAGGGCATGAAGTAAAGCGTTGCCTGAATGCTGTGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000109641.2 ENSMUST00000109642.8 ENSMUST00000109643.8 ENSMUST00000166950.8 ENSMUST00000178855.8 |
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| 3UTR CAA 72 bp | GAGTTGAGTGGTAGGCCCAGACAATTACTAAGCAGCTaGCAGCTGCTAGCTGTCCATTTCCTGCTCTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: ELSGRPRQLLSS*QLLAVHFLLSQ Trigger: CTGAGAGAGCAGGAAATGGACAGCTAGCAGCTGCAAGCTGCTTAGTAATTGTCTGGGCCTACCACTCAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109643.8 |
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| 3UTR CAA 72 bp | CAGGGATATTTAATCTCCAGCTATGAGAGCGGGTATTaGGGTGATTGGGTCACACAGGGTCCTCCTTACCTG | + |
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Preference number: 4 (lower is better) Translates to: QGYLISSYESGY*GDWVTQGPPYL Trigger: CAGGTAAGGAGGACCCTGTGTGACCCAATCACCCAAATACCCGCTCTCATAGCTGGAGATTAAATATCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109643.8 |
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| CDS-3UTR CCA 90 bp | CCTGAACCTGCTGGCACTGCTACACTTGGCTTTCATGGCTCTCAGGATGTGAAAGCCATGGCAATCTTCTaGAATTCTTTTCTGTCGGGT | + |
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Preference number: 4 (lower is better) Translates to: PEPAGTATLGFHGSQDVKAMAIF*NSFLSG Trigger: ACCCGACAGAAAAGAATTCCAGAAGATTGCCATGGC...TTTCACATCCTGAGAGCCATGAAAGCCAAGTGTAGCAGTGCCAGCAGGTTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109642.8 ENSMUST00000109643.8 |
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| CDS-3UTR CCA 90 bp | AAGGAGGAAGAAACAAAACACCACACAGCATTCAGGCAACGCTTTACTTCATGCGCCATGGCAATCTTCTaGAATTCTTTTCTGTCGGGT | + |
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Preference number: 4 (lower is better) Translates to: KEEETKHHTAFRQRFTSCAMAIF*NSFLSG Trigger: ACCCGACAGAAAAGAATTCCAGAAGATTGCCATGGC...GCATGAAGTAAAGCGTTGCCTGAATGCTGTGTGGTGTTTTGTTTCTTCCTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000109641.2 ENSMUST00000109642.8 ENSMUST00000109643.8 ENSMUST00000166950.8 ENSMUST00000178855.8 |
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| CDS-3UTR CCA 90 bp | AAGAAACAAAACACCACACAGCATTCAGGCAACGCTTTACTTCATGCCCTTTCCGCCATGGCAATCTTCTaGAATTCTTTTCTGTCGGGT | + |
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Preference number: 4 (lower is better) Translates to: KKQNTTQHSGNALLHALSAMAIF*NSFLSG Trigger: ACCCGACAGAAAAGAATTCCAGAAGATTGCCATGGC...GGAAAGGGCATGAAGTAAAGCGTTGCCTGAATGCTGTGTGGTGTTTTGTTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000109641.2 ENSMUST00000109642.8 ENSMUST00000109643.8 ENSMUST00000166950.8 ENSMUST00000178855.8 |
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| CDS-3UTR CCA 90 bp | GAAGGAGGAAGAAACAAAACACCACACAGCATTCAGGCAACGCTTTACTTCATGGCCATGGCAATCTTCTaGAATTCTTTTCTGTCGGGT | + |
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Preference number: 4 (lower is better) Translates to: EGGRNKTPHSIQATLYFMAMAIF*NSFLSG Trigger: ACCCGACAGAAAAGAATTCCAGAAGATTGCCATGGC...CATGAAGTAAAGCGTTGCCTGAATGCTGTGTGGTGTTTTGTTTCTTCCTCCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000109641.2 ENSMUST00000109642.8 ENSMUST00000109643.8 ENSMUST00000166950.8 ENSMUST00000178855.8 |
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| CDS-3UTR TCA 90 bp | ATAGGAAGGAGGAAGAAACAAAACACCACACAGCATTCAGGCAACGCTTTACTTACAAACTGCATTACCTaGTCCATGTTTGTTGGATGG | + |
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Preference number: 4 (lower is better) Translates to: IGRRKKQNTTQHSGNALLTNCIT*SMFVGW Trigger: CCATCCAACAAACATGGATCAGGTAATGCAGTTTGT...AAGTAAAGCGTTGCCTGAATGCTGTGTGGTGTTTTGTTTCTTCCTCCTTCCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166950.8 |
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| CDS-3UTR CAA 90 bp | AGCATTCAGGCAACGCTTTACTTCATGCCCTTTCCCCCGCTCTGGCTCACTCGTTCTTTTCTGTCGGGTTaGGTGCATCTTTTAACCAGC | + |
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Preference number: 5 (lower is better) Translates to: SIQATLYFMPFPPLWLTRSFLSG*VHLLTS Trigger: GCTGGTTAAAAGATGCACCAAACCCGACAGAAAAGA...ACGAGTGAGCCAGAGCGGGGGAAAGGGCATGAAGTAAAGCGTTGCCTGAATGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000109641.2 ENSMUST00000109642.8 ENSMUST00000109643.8 ENSMUST00000166950.8 ENSMUST00000178855.8 |
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| CDS-3UTR CAA 90 bp | CACAGCATTCAGGCAACGCTTTACTTCATGCCCTTTCCCCCGCTCTGGCTCACTTCTTTTCTGTCGGGTTaGGTGCATCTTTTAACCAGC | + |
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Preference number: 5 (lower is better) Translates to: HSIQATLYFMPFPPLWLTSFLSG*VHLLTS Trigger: GCTGGTTAAAAGATGCACCAAACCCGACAGAAAAGA...AGTGAGCCAGAGCGGGGGAAAGGGCATGAAGTAAAGCGTTGCCTGAATGCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000109641.2 ENSMUST00000109642.8 ENSMUST00000109643.8 ENSMUST00000166950.8 ENSMUST00000178855.8 |
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| CDS-3UTR CAA 90 bp | AACACCACACAGCATTCAGGCAACGCTTTACTTCATGCCCTTTCCCCCGCTCTGTCTTTTCTGTCGGGTTaGGTGCATCTTTTAACCAGC | + |
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Preference number: 5 (lower is better) Translates to: NTTQHSGNALLHALSPALSFLSG*VHLLTS Trigger: GCTGGTTAAAAGATGCACCAAACCCGACAGAAAAGA...CAGAGCGGGGGAAAGGGCATGAAGTAAAGCGTTGCCTGAATGCTGTGTGGTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000109641.2 ENSMUST00000109642.8 ENSMUST00000109643.8 ENSMUST00000166950.8 ENSMUST00000178855.8 |
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| CDS-3UTR CAA 90 bp | GAAGAAACAAAACACCACACAGCATTCAGGCAACGCTTTACTTCATGCCCTTTCCCTGATCCATGTTTGTaGGATGGCGGATTGAGAGCG | + |
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Preference number: 5 (lower is better) Translates to: EETKHHTAFRQRFTSCPFPDPCL*DGGLRA Trigger: CGCTCTCAATCCGCCATCCAACAAACATGGATCAGG...GAAAGGGCATGAAGTAAAGCGTTGCCTGAATGCTGTGTGGTGTTTTGTTTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166950.8 |
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| CDS-3UTR CAA 90 bp | CCTCATAGGAAGGAGGAAGAAACAAAACACCACACAGCATTCAGGCAACGCTTTTCTTTTCTGTCGGGTTaGGTGCATCTTTTAACCAGC | + |
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Preference number: 5 (lower is better) Translates to: PHRKEEETKHHTAFRQRFSFLSG*VHLLTS Trigger: GCTGGTTAAAAGATGCACCAAACCCGACAGAAAAGA...AAAGCGTTGCCTGAATGCTGTGTGGTGTTTTGTTTCTTCCTCCTTCCTATGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000109641.2 ENSMUST00000109642.8 ENSMUST00000109643.8 ENSMUST00000166950.8 ENSMUST00000178855.8 |
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| CDS-3UTR CAA 90 bp | GAAGAAACAAAACACCACACAGCATTCAGGCAACGCTTTACTTCATGCCCTTTCTCTTTTCTGTCGGGTTaGGTGCATCTTTTAACCAGC | + |
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Preference number: 5 (lower is better) Translates to: EETKHHTAFRQRFTSCPFSFLSG*VHLLTS Trigger: GCTGGTTAAAAGATGCACCAAACCCGACAGAAAAGA...GAAAGGGCATGAAGTAAAGCGTTGCCTGAATGCTGTGTGGTGTTTTGTTTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000109641.2 ENSMUST00000109642.8 ENSMUST00000109643.8 ENSMUST00000166950.8 ENSMUST00000178855.8 |
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| CDS TCA 72 bp | ACAAACTGCCGGCTGGGCTCCACAAACTGCATTACCTaGTCCATGTTTGTTGGATGGCGGATTGAGAGCGTA | + |
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Preference number: 6 (lower is better) Translates to: TNCRLGSTNCIT*SMFVGWRIESV Trigger: TACGCTCTCAATCCGCCATCCAACAAACATGGATCAGGTAATGCAGTTTGTGGAGCCCAGCCGGCAGTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166950.8 |
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