Pregenerated sensors for SEC61A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025816Ensembl transcript IDs: ENSMUST00000026926.5, ENSMUST00000102981.10, ENSMUST00000132908.4, ENSMUST00000193792.6
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TACTCATTGCTCACTTCCACTCAACTACAGACACTGCTTGAGAACTaGGTCTTGCTTTGGGGACGAGGGGAGAGAGGAAATACTTGGGGG | + |
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Preference number: 1 (lower is better) Translates to: YSLLTSTQLQTLLEN*VLLWGRGERGNTWG Trigger: CCCCCAAGTATTTCCTCTCTCCCCTCGTCCCCAAAGCAAGACCCAGTTCTCAAGCAGTGTCTGTAGTTGAGTGGAAGTGAGCAATGAGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| 3UTR TCA 90 bp | ACAGGCTTAGCTCTGTGCCCACTTCAGAAATGGGACAGTGAGCACTaGAAACAACAAACTGAGGGAAGAAAGGGGAACCAGCATTATTTG | + |
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Preference number: 1 (lower is better) Translates to: TGLALCPLQKWDSEH*KQQTEGRKGNQHYL Trigger: CAAATAATGCTGGTTCCCCTTTCTTCCCTCAGTTTGTTGTTTTCAGTGCTCACTGTCCCATTTCTGAAGTGGGCACAGAGCTAAGCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102981.10 ENSMUST00000132908.4 ENSMUST00000193792.6 |
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| 3UTR TCA 90 bp | TTGTCTACTGTTTACACTTGGGTCCTGCTATGCATATCACAGACATaGAGTCCTTGCATGAATACTCATTGCTCACTTCCACTCAACTAC | + |
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Preference number: 1 (lower is better) Translates to: LSTVYTWVLLCISQT*SPCMNTHCSLPLNY Trigger: GTAGTTGAGTGGAAGTGAGCAATGAGTATTCATGCAAGGACTTCATGTCTGTGATATGCATAGCAGGACCCAAGTGTAAACAGTAGACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| 3UTR-3UTR CCA 90 bp | TACAGCTGGACAGCACTCGTAGCTGTCACCAGGAAAAGAGGACAAATGAAAAGCCCCATCCAGGCTGAGTaGCAGTTTGGGGATAGGATG | + |
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Preference number: 2 (lower is better) Translates to: YSWTALVAVTRKRGQMKSPIQAE*QFGDRM Trigger: CATCCTATCCCCAAACTGCCACTCAGCCTGGATGGG...GCTTTTCATTTGTCCTCTTTTCCTGGTGACAGCTACGAGTGCTGTCCAGCTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| 3UTR-3UTR GCA 90 bp | TTTTTGCCCATCCAGGCTGAGTGGCAGTTTGGGGATAGGATGAATCAAGTAGGGACAGGCTTAGCTCTGTaGCCACTTCAGAAATGGGAC | + |
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Preference number: 2 (lower is better) Translates to: FLPIQAEWQFGDRMNQVGTGLAL*PLQKWD Trigger: GTCCCATTTCTGAAGTGGGCACAGAGCTAAGCCTGT...CCCTACTTGATTCATCCTATCCCCAAACTGCCACTCAGCCTGGATGGGCAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| 3UTR-3UTR TCA 90 bp | GAAATAACTTCAATGCTTGATTTTTGCCCATCCAGGCTGAGTGGCAGTTTGGGGCACTGTCTTGCTGTCTaGCCAACAGCGAGGCAGATA | + |
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Preference number: 2 (lower is better) Translates to: EITSMLDFCPSRLSGSLGHCLAV*PTARQI Trigger: TATCTGCCTCGCTGTTGGTCAGACAGCAAGACAGTG...CCCCAAACTGCCACTCAGCCTGGATGGGCAAAAATCAAGCATTGAAGTTATTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| 3UTR-3UTR GCA 90 bp | TACAGCTGGACAGCACTCGTAGCTGTCACCAGGAAAAGAGGACAAATGAAAAGCACAGGCTTAGCTCTGTaGCCACTTCAGAAATGGGAC | + |
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Preference number: 2 (lower is better) Translates to: YSWTALVAVTRKRGQMKSTGLAL*PLQKWD Trigger: GTCCCATTTCTGAAGTGGGCACAGAGCTAAGCCTGT...GCTTTTCATTTGTCCTCTTTTCCTGGTGACAGCTACGAGTGCTGTCCAGCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| 3UTR-3UTR CCA 90 bp | GAATACTCATTGCTCACTTCCACTCAACTACAGACACTGCTTGAGAACTGGGTCCATGGCCAATACAGCTaGACAGCACTCGTAGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: EYSLLTSTQLQTLLENWVHGQYS*TALVAV Trigger: GACAGCTACGAGTGCTGTCCAGCTGTATTGGCCATG...GACCCAGTTCTCAAGCAGTGTCTGTAGTTGAGTGGAAGTGAGCAATGAGTATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| 3UTR-3UTR CCA 90 bp | TCCACTCAACTACAGACACTGCTTGAGAACTGGGTCTTGCTTTGGGGACGAGGGCAAAATACTGGAAAGTaGCAATCTGCACTGCACTTA | + |
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Preference number: 2 (lower is better) Translates to: STQLQTLLENWVLLWGRGQNTGK*QSALHL Trigger: TAAGTGCAGTGCAGATTGCCACTTTCCAGTATTTTG...CCCTCGTCCCCAAAGCAAGACCCAGTTCTCAAGCAGTGTCTGTAGTTGAGTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| 3UTR-3UTR CCA 90 bp | GACATGAAGTCCTTGCATGAATACTCATTGCTCACTTCCACTCAACTACAGACACCCATCCAGGCTGAGTaGCAGTTTGGGGATAGGATG | + |
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Preference number: 2 (lower is better) Translates to: DMKSLHEYSLLTSTQLQTPIQAE*QFGDRM Trigger: CATCCTATCCCCAAACTGCCACTCAGCCTGGATGGG...TGTCTGTAGTTGAGTGGAAGTGAGCAATGAGTATTCATGCAAGGACTTCATGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| 3UTR-3UTR CCA 90 bp | AATACTTGGGGGCATTGGAGTAGAAGGCATGGCCAATACAGCTGGACAGCACTCAGCAGAAAAGGGAATTaGAAGCAATTGTGTCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: NTWGHWSRRHGQYSWTALSRKGN*KQLCPV Trigger: CACTGGACACAATTGCTTCCAATTCCCTTTTCTGCT...GAGTGCTGTCCAGCTGTATTGGCCATGCCTTCTACTCCAATGCCCCCAAGTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| 3UTR-3UTR GCA 90 bp | GAATACTCATTGCTCACTTCCACTCAACTACAGACACTGCTTGAGAACTGGGTCTCAATGCTTGATTTTTaGCCATCCAGGCTGAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: EYSLLTSTQLQTLLENWVSMLDF*PSRLSG Trigger: GCCACTCAGCCTGGATGGGCAAAAATCAAGCATTGA...GACCCAGTTCTCAAGCAGTGTCTGTAGTTGAGTGGAAGTGAGCAATGAGTATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| 3UTR-3UTR GCA 90 bp | ACAGACATGAAGTCCTTGCATGAATACTCATTGCTCACTTCCACTCAACTACAGTTGAGAACTGGGTCTTaGTTTGGGGACGAGGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: TDMKSLHEYSLLTSTQLQLRTGS*FGDEGR Trigger: TCTCCCCTCGTCCCCAAAGCAAGACCCAGTTCTCAA...CTGTAGTTGAGTGGAAGTGAGCAATGAGTATTCATGCAAGGACTTCATGTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| 3UTR CAA 90 bp | CCTGCTATGCATATCACAGACATGAAGTCCTTGCATGAATACTCATaGCTCACTTCCACTCAACTACAGACACTGCTTGAGAACTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: PAMHITDMKSLHEYS*LTSTQLQTLLENWV Trigger: GACCCAGTTCTCAAGCAGTGTCTGTAGTTGAGTGGAAGTGAGCAATGAGTATTCATGCAAGGACTTCATGTCTGTGATATGCATAGCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| 3UTR-3UTR TCA 90 bp | ACACTGCTTCCCAGCGTCATGGCTAACACTAGATGGACAGTGTCAACAAATAATTGGGACAGTGAGCACTaGAAACAACAAACTGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: TLLPSVMANTRWTVSTNNWDSEH*KQQTEG Trigger: TCCCTCAGTTTGTTGTTTTCAGTGCTCACTGTCCCA...ATTATTTGTTGACACTGTCCATCTAGTGTTAGCCATGACGCTGGGAAGCAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| 3UTR-3UTR TCA 90 bp | TGCATGAATACTCATTGCTCACTTCCACTCAACTACAGACACTGCTTGAGAACTTGGGACAGTGAGCACTaGAAACAACAAACTGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: CMNTHCSLPLNYRHCLRTWDSEH*KQQTEG Trigger: TCCCTCAGTTTGTTGTTTTCAGTGCTCACTGTCCCA...AGTTCTCAAGCAGTGTCTGTAGTTGAGTGGAAGTGAGCAATGAGTATTCATGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| 3UTR-3UTR GCA 90 bp | TTACACTTGGGTCCTGCTATGCATATCACAGACATGAAGTCCTTGCATGAATACCTCAACTACAGACACTaGTTGAGAACTGGGTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: LHLGPAMHITDMKSLHEYLNYRH*LRTGSC Trigger: GCAAGACCCAGTTCTCAAGCAGTGTCTGTAGTTGAG...GTATTCATGCAAGGACTTCATGTCTGTGATATGCATAGCAGGACCCAAGTGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| 3UTR CAA 90 bp | TGTTTACACTTGGGTCCTGCTATGCATATCACAGACATGAAGTCCTaGCATGAATACTCATTGCTCACTTCCACTCAACTACAGACACTG | + |
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Preference number: 2 (lower is better) Translates to: CLHLGPAMHITDMKS*HEYSLLTSTQLQTL Trigger: CAGTGTCTGTAGTTGAGTGGAAGTGAGCAATGAGTATTCATGCAAGGACTTCATGTCTGTGATATGCATAGCAGGACCCAAGTGTAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| 3UTR-3UTR TCA 90 bp | ATACACTGCTTCCCAGCGTCATGGCTAACACTAGATGGACAGTGTCAACAAATATCAGAAATGGGACAGTaGGCACTGAAAACAACAAAC | + |
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Preference number: 2 (lower is better) Translates to: IHCFPASWLTLDGQCQQISEMGQ*ALKTTN Trigger: GTTTGTTGTTTTCAGTGCTCACTGTCCCATTTCTGA...TATTTGTTGACACTGTCCATCTAGTGTTAGCCATGACGCTGGGAAGCAGTGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| 3UTR-3UTR CCA 90 bp | TTACACTTGGGTCCTGCTATGCATATCACAGACATGAAGTCCTTGCATGAATACGGAAGCTCAAAATACTaGAAAGTGGCAATCTGCACT | + |
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Preference number: 2 (lower is better) Translates to: LHLGPAMHITDMKSLHEYGSSKY*KVAICT Trigger: AGTGCAGATTGCCACTTTCCAGTATTTTGAGCTTCC...GTATTCATGCAAGGACTTCATGTCTGTGATATGCATAGCAGGACCCAAGTGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| 3UTR-3UTR TCA 90 bp | TGCATGAATACTCATTGCTCACTTCCACTCAACTACAGACACTGCTTGAGAACTAATAACTTCAATGCTTaGTTTTTGCCCATCCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: CMNTHCSLPLNYRHCLRTNNFNA*FLPIQA Trigger: AGCCTGGATGGGCAAAAATCAAGCATTGAAGTTATT...AGTTCTCAAGCAGTGTCTGTAGTTGAGTGGAAGTGAGCAATGAGTATTCATGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| 3UTR-3UTR TCA 90 bp | AAGTTTATTGTCTACTGTTTACACTTGGGTCCTGCTATGCATATCACAGACATGTCAGAAATGGGACAGTaGGCACTGAAAACAACAAAC | + |
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Preference number: 2 (lower is better) Translates to: KFIVYCLHLGPAMHITDMSEMGQ*ALKTTN Trigger: GTTTGTTGTTTTCAGTGCTCACTGTCCCATTTCTGA...CATGTCTGTGATATGCATAGCAGGACCCAAGTGTAAACAGTAGACAATAAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| 3UTR TCA 72 bp | GTGTGCGAAGCTAATCCACATCACTGTCTTGCTGTCTaGCCAACAGCGAGGCAGATACACTGCTTCCCAGCG | + |
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Preference number: 3 (lower is better) Translates to: VCEANPHHCLAV*PTARQIHCFPA Trigger: CGCTGGGAAGCAGTGTATCTGCCTCGCTGTTGGTCAGACAGCAAGACAGTGATGTGGATTAGCTTCGCACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| 3UTR GCA 72 bp | CCACTCAACTACAGACACTGCTTGAGAACTGGGTCTTaGTTTGGGGACGAGGGGAGAGAGGAAATACTTGGG | + |
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Preference number: 3 (lower is better) Translates to: PLNYRHCLRTGS*FGDEGREEILG Trigger: CCCAAGTATTTCCTCTCTCCCCTCGTCCCCAAAGCAAGACCCAGTTCTCAAGCAGTGTCTGTAGTTGAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| 3UTR-3UTR CAA 90 bp | AGCGAGGCAGATACACTGCTTCCCAGCGTCATGGCTAACACTAGATGGACAGTGGGGAACCAGCATTATTaGACAGAAACAGTATGTCAA | + |
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Preference number: 3 (lower is better) Translates to: SEADTLLPSVMANTRWTVGNQHY*TETVCQ Trigger: TTGACATACTGTTTCTGTCAAATAATGCTGGTTCCC...CACTGTCCATCTAGTGTTAGCCATGACGCTGGGAAGCAGTGTATCTGCCTCGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| 3UTR-3UTR CAA 90 bp | CTGATGCTGCACACAGGCTTAGCTCTGTGCCCACTTCAGAAATGGGACAGTGAGGGGAACCAGCATTATTaGACAGAAACAGTATGTCAA | + |
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Preference number: 3 (lower is better) Translates to: LMLHTGLALCPLQKWDSEGNQHY*TETVCQ Trigger: TTGACATACTGTTTCTGTCAAATAATGCTGGTTCCC...CTCACTGTCCCATTTCTGAAGTGGGCACAGAGCTAAGCCTGTGTGCAGCATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102981.10 ENSMUST00000132908.4 ENSMUST00000193792.6 |
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| 3UTR TCA 72 bp | GCAATTGTGTCCAGTGACAGAAATAACTTCAATGCTTaGTTTTTGCCCATCCAGGCTGAGTGGCAGTTTGGG | + |
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Preference number: 3 (lower is better) Translates to: AIVSSDRNNFNA*FLPIQAEWQFG Trigger: CCCAAACTGCCACTCAGCCTGGATGGGCAAAAATCAAGCATTGAAGTTATTTCTGTCACTGGACACAATTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| 3UTR GCA 72 bp | TGTCCAGTGACAGAAATAACTTCAATGCTTGATTTTTaGCCATCCAGGCTGAGTGGCAGTTTGGGGATAGGA | + |
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Preference number: 3 (lower is better) Translates to: CPVTEITSMLDF*PSRLSGSLGIG Trigger: TCCTATCCCCAAACTGCCACTCAGCCTGGATGGGCAAAAATCAAGCATTGAAGTTATTTCTGTCACTGGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| 3UTR-3UTR CAA 90 bp | GAAATAACTTCAATGCTTGATTTTTGCCCATCCAGGCTGAGTGGCAGTTTGGGGGGGAACCAGCATTATTaGACAGAAACAGTATGTCAA | + |
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Preference number: 3 (lower is better) Translates to: EITSMLDFCPSRLSGSLGGNQHY*TETVCQ Trigger: TTGACATACTGTTTCTGTCAAATAATGCTGGTTCCC...CCCCAAACTGCCACTCAGCCTGGATGGGCAAAAATCAAGCATTGAAGTTATTTC 43% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| 3UTR-3UTR CAA 90 bp | AAGTTTATTGTCTACTGTTTACACTTGGGTCCTGCTATGCATATCACAGACATGATCCACATCACTGTCTaGCTGTCTGACCAACAGCGA | + |
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Preference number: 3 (lower is better) Translates to: KFIVYCLHLGPAMHITDMIHITV*LSDQQR Trigger: TCGCTGTTGGTCAGACAGCAAGACAGTGATGTGGAT...CATGTCTGTGATATGCATAGCAGGACCCAAGTGTAAACAGTAGACAATAAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| 3UTR TCA 72 bp | TCCTGCTATGCATATCACAGACATGAAGTCCTTGCATaGATACTCATTGCTCACTTCCACTCAACTACAGAC | + |
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Preference number: 3 (lower is better) Translates to: SCYAYHRHEVLA*ILIAHFHSTTD Trigger: GTCTGTAGTTGAGTGGAAGTGAGCAATGAGTATTCATGCAAGGACTTCATGTCTGTGATATGCATAGCAGGA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| 3UTR TCA 72 bp | GTTTACACTTGGGTCCTGCTATGCATATCACAGACATaGAGTCCTTGCATGAATACTCATTGCTCACTTCCA | + |
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Preference number: 3 (lower is better) Translates to: VYTWVLLCISQT*SPCMNTHCSLP Trigger: TGGAAGTGAGCAATGAGTATTCATGCAAGGACTTCATGTCTGTGATATGCATAGCAGGACCCAAGTGTAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| 3UTR-3UTR CAA 90 bp | AAAGTTTATTGTCTACTGTTTACACTTGGGTCCTGCTATGCATATCACAGACATATCCACATCACTGTCTaGCTGTCTGACCAACAGCGA | + |
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Preference number: 3 (lower is better) Translates to: KVYCLLFTLGSCYAYHRHIHITV*LSDQQR Trigger: TCGCTGTTGGTCAGACAGCAAGACAGTGATGTGGAT...ATGTCTGTGATATGCATAGCAGGACCCAAGTGTAAACAGTAGACAATAAACTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| 3UTR-3UTR CAA 90 bp | GACATGAAGTCCTTGCATGAATACTCATTGCTCACTTCCACTCAACTACAGACAAAGCAGAAAAGGGAATaGGAAGCAATTGTGTCCAGT | + |
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Preference number: 3 (lower is better) Translates to: DMKSLHEYSLLTSTQLQTKQKRE*EAIVSS Trigger: ACTGGACACAATTGCTTCCAATTCCCTTTTCTGCTT...TGTCTGTAGTTGAGTGGAAGTGAGCAATGAGTATTCATGCAAGGACTTCATGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| 3UTR-3UTR CAA 90 bp | AAAGTTTATTGTCTACTGTTTACACTTGGGTCCTGCTATGCATATCACAGACATAAGCAGAAAAGGGAATaGGAAGCAATTGTGTCCAGT | + |
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Preference number: 3 (lower is better) Translates to: KVYCLLFTLGSCYAYHRHKQKRE*EAIVSS Trigger: ACTGGACACAATTGCTTCCAATTCCCTTTTCTGCTT...ATGTCTGTGATATGCATAGCAGGACCCAAGTGTAAACAGTAGACAATAAACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| CDS-3UTR TCA 90 bp | TCCCAGACCCCAAGCCGTAACCCTTCTGTAGCAGCTCATCTAACAGCAGCACAACGTACATCCCCGTCATaGCATACACAATGGCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: SQTPSRNPSVAAHLTAAQRTSPS*HTQWLA Trigger: GGCAAGCCATTGTGTATGTCATGACGGGGATGTACG...TTGTGCTGCTGTTAGATGAGCTGCTACAGAAGGGTTACGGCTTGGGGTCTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026926.5 |
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| CDS-3UTR TCA 90 bp | TTCAGTTTTAAGGCAGCTGGTACTGATGCTGCACACAGGCTTAGCTCTGTGCCCATGGAGGTATCTCTGTaGCCCCTCATCACCATCTGC | + |
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Preference number: 4 (lower is better) Translates to: FSFKAAGTDAAHRLSSVPMEVSL*PLITIC Trigger: GCAGATGGTGATGAGGGGTCACAGAGATACCTCCAT...GGGCACAGAGCTAAGCCTGTGTGCAGCATCAGTACCAGCTGCCTTAAAACTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102981.10 ENSMUST00000132908.4 ENSMUST00000193792.6 |
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| CDS-3UTR CCA 90 bp | CTGATGCTGCACACAGGCTTAGCTCTGTGCCCACTTCAGAAATGGGACAGTGAGTACCTGTTCAGCTCATaGACCATGGAGGTATCTCTG | + |
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Preference number: 4 (lower is better) Translates to: LMLHTGLALCPLQKWDSEYLFSS*TMEVSL Trigger: CAGAGATACCTCCATGGTCCATGAGCTGAACAGGTA...CTCACTGTCCCATTTCTGAAGTGGGCACAGAGCTAAGCCTGTGTGCAGCATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102981.10 ENSMUST00000132908.4 ENSMUST00000193792.6 |
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| 3UTR CAA 72 bp | TCCACTCAACTACAGACACTGCTTGAGAACTGGGTCTaGCTTTGGGGACGAGGGGAGAGAGGAAATACTTGG | + |
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Preference number: 4 (lower is better) Translates to: STQLQTLLENWV*LWGRGERGNTW Trigger: CCAAGTATTTCCTCTCTCCCCTCGTCCCCAAAGCAAGACCCAGTTCTCAAGCAGTGTCTGTAGTTGAGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| CDS-3UTR TCA 90 bp | GGGAAATCCCAGACCCCAAGCCGTAACCCTTCTGTAGCAGCTCATCTAACAGCAATTTCTGGGCTCCATTaGACAGAGCTCTATCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: GKSQTPSRNPSVAAHLTAISGLH*TELYLW Trigger: CCAAAGATAGAGCTCTGTTCAATGGAGCCCAGAAAT...TGCTGTTAGATGAGCTGCTACAGAAGGGTTACGGCTTGGGGTCTGGGATTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026926.5 |
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| CDS-3UTR TCA 90 bp | TCCACTCAACTACAGACACTGCTTGAGAACTGGGTCTTGCTTTGGGGACGAGGGAATGAAACAGAGCTATaGCTGCACCTTCAAACTCCG | + |
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Preference number: 4 (lower is better) Translates to: STQLQTLLENWVLLWGRGNETEL*LHLQTP Trigger: CGGAGTTTGAAGGTGCAGTCATAGCTCTGTTTCATT...CCCTCGTCCCCAAAGCAAGACCCAGTTCTCAAGCAGTGTCTGTAGTTGAGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| CDS-3UTR TCA 90 bp | TACAGCTGGACAGCACTCGTAGCTGTCACCAGGAAAAGAGGACAAATGAAAAGCATGGAGGTATCTCTGTaGCCCCTCATCACCATCTGC | + |
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Preference number: 4 (lower is better) Translates to: YSWTALVAVTRKRGQMKSMEVSL*PLITIC Trigger: GCAGATGGTGATGAGGGGTCACAGAGATACCTCCAT...GCTTTTCATTTGTCCTCTTTTCCTGGTGACAGCTACGAGTGCTGTCCAGCTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| CDS-3UTR GCA 90 bp | CTGATGCTGCACACAGGCTTAGCTCTGTGCCCACTTCAGAAATGGGACAGTGAGCCCCTCATCACCATCTaGTGTTCTTTAAGTTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: LMLHTGLALCPLQKWDSEPLITI*CSLSCL Trigger: CAAGCAACTTAAAGAACAGCAGATGGTGATGAGGGG...CTCACTGTCCCATTTCTGAAGTGGGCACAGAGCTAAGCCTGTGTGCAGCATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102981.10 ENSMUST00000132908.4 ENSMUST00000193792.6 |
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| CDS-3UTR CCA 90 bp | TTTTTGCCCATCCAGGCTGAGTGGCAGTTTGGGGATAGGATGAATCAAGTAGGGCCTTGTCTGTCCTGGTaGCCAGCAAATGAAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLPIQAEWQFGDRMNQVGPCLSW*PANETE Trigger: CTCTGTTTCATTTGCTGGCCACCAGGACAGACAAGG...CCCTACTTGATTCATCCTATCCCCAAACTGCCACTCAGCCTGGATGGGCAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
||
| CDS-3UTR TCA 90 bp | AATACTTGGGGGCATTGGAGTAGAAGGCATGGCCAATACAGCTGGACAGCACTCATTTCTGGGCTCCATTaGACAGAGCTCTATCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NTWGHWSRRHGQYSWTALISGLH*TELYLW Trigger: CCAAAGATAGAGCTCTGTTCAATGGAGCCCAGAAAT...GAGTGCTGTCCAGCTGTATTGGCCATGCCTTCTACTCCAATGCCCCCAAGTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
||
| CDS-3UTR TCA 90 bp | CTGATGCTGCACACAGGCTTAGCTCTGTGCCCACTTCAGAAATGGGACAGTGAGCATCCTGAAAATAGATaGCGACAGCAAACACGAACA | + |
|
Preference number: 4 (lower is better) Translates to: LMLHTGLALCPLQKWDSEHPENR*RQQTRT Trigger: TGTTCGTGTTTGCTGTCGTCATCTATTTTCAGGATG...CTCACTGTCCCATTTCTGAAGTGGGCACAGAGCTAAGCCTGTGTGCAGCATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193792.6 |
||
| CDS-3UTR GCA 90 bp | TCCCAGACCCCAAGCCGTAACCCTTCTGTAGCAGCTCATCTAACAGCAGCACAAGCTCCAGCTAACAACTaGATAATCAAACCAGACGTT | + |
|
Preference number: 4 (lower is better) Translates to: SQTPSRNPSVAAHLTAAQAPANN*IIKPDV Trigger: AACGTCTGGTTTGATTATGCAGTTGTTAGCTGGAGC...TTGTGCTGCTGTTAGATGAGCTGCTACAGAAGGGTTACGGCTTGGGGTCTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026926.5 |
||
| CDS-3UTR GCA 90 bp | GTACTGATGCTGCACACAGGCTTAGCTCTGTGCCCACTTCAGAAATGGGACAGTAAACAGAGCTATGACTaGACCTTCAAACTCCGTACC | + |
|
Preference number: 4 (lower is better) Translates to: VLMLHTGLALCPLQKWDSKQSYD*TFKLRT Trigger: GGTACGGAGTTTGAAGGTGCAGTCATAGCTCTGTTT...ACTGTCCCATTTCTGAAGTGGGCACAGAGCTAAGCCTGTGTGCAGCATCAGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
||
| CDS-3UTR CCA 90 bp | CAGCTGGTACTGATGCTGCACACAGGCTTAGCTCTGTGCCCACTTCAGAAATGGCGAACAGACAGCATCTaGGAAATGACGTACAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QLVLMLHTGLALCPLQKWRTDSI*EMTYKF Trigger: AAACTTGTACGTCATTTCCCAGATGCTGTCTGTTCG...CCATTTCTGAAGTGGGCACAGAGCTAAGCCTGTGTGCAGCATCAGTACCAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000132908.4 |
||
| CDS-3UTR TCA 90 bp | AAATCCCAGACCCCAAGCCGTAACCCTTCTGTAGCAGCTCATCTAACAGCAGCATTCCTTTCAGGCTTCTaGATTTCTGGTAGAACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KSQTPSRNPSVAAHLTAAFLSGF*ISGRTA Trigger: TGCAGTTCTACCAGAAATTCAGAAGCCTGAAAGGAA...TGCTGCTGTTAGATGAGCTGCTACAGAAGGGTTACGGCTTGGGGTCTGGGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026926.5 |
||
| CDS-3UTR TCA 90 bp | AATACTTGGGGGCATTGGAGTAGAAGGCATGGCCAATACAGCTGGACAGCACTCTTCCTTTCAGGCTTCTaGATTTCTGGTAGAACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NTWGHWSRRHGQYSWTALFLSGF*ISGRTA Trigger: TGCAGTTCTACCAGAAATTCAGAAGCCTGAAAGGAA...GAGTGCTGTCCAGCTGTATTGGCCATGCCTTCTACTCCAATGCCCCCAAGTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
||
| CDS-3UTR TCA 90 bp | ACACTGCTTCCCAGCGTCATGGCTAACACTAGATGGACAGTGTCAACAAATAATCGTACATCCCCGTCATaGCATACACAATGGCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLLPSVMANTRWTVSTNNRTSPS*HTQWLA Trigger: GGCAAGCCATTGTGTATGTCATGACGGGGATGTACG...ATTATTTGTTGACACTGTCCATCTAGTGTTAGCCATGACGCTGGGAAGCAGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
||
| CDS-3UTR TCA 90 bp | CAGCTGGTACTGATGCTGCACACAGGCTTAGCTCTGTGCCCACTTCAGAAATGGACAGCATCTGGGAAATaGCGTACAAGTTTGAAACTA | + |
|
Preference number: 4 (lower is better) Translates to: QLVLMLHTGLALCPLQKWTASGK*RTSLKL Trigger: TAGTTTCAAACTTGTACGTCATTTCCCAGATGCTGT...CCATTTCTGAAGTGGGCACAGAGCTAAGCCTGTGTGCAGCATCAGTACCAGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000132908.4 |
||
| CDS-3UTR CCA 90 bp | GAATACTCATTGCTCACTTCCACTCAACTACAGACACTGCTTGAGAACTGGGTCGCACCTTGTCTGTCCTaGTGGCCAGCAAATGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: EYSLLTSTQLQTLLENWVAPCLS*WPANET Trigger: TGTTTCATTTGCTGGCCACCAGGACAGACAAGGTGC...GACCCAGTTCTCAAGCAGTGTCTGTAGTTGAGTGGAAGTGAGCAATGAGTATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
||
| CDS-3UTR TCA 90 bp | GATGTTGGTGGCAATAAAGAGGGAAATCCCAGACCCCAAGCCGTAACCCTTCTGACCTTCTCTCTAAACTaGATTTTCCTTTCAGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DVGGNKEGNPRPQAVTLLTFSLN*IFLSGF Trigger: GAAGCCTGAAAGGAAAATTCAGTTTAGAGAGAAGGT...CAGAAGGGTTACGGCTTGGGGTCTGGGATTTCCCTCTTTATTGCCACCAACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026926.5 |
||
| CDS-3UTR TCA 90 bp | ATGCTCCATAACTCATTAGGGAAGCTCAAAATACTGGAAAGTGGCAATCTGCACCGTACATCCCCGTCATaGCATACACAATGGCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: MLHNSLGKLKILESGNLHRTSPS*HTQWLA Trigger: GGCAAGCCATTGTGTATGTCATGACGGGGATGTACG...GTGCAGATTGCCACTTTCCAGTATTTTGAGCTTCCCTAATGAGTTATGGAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
||
| CDS-3UTR TCA 90 bp | TACAGCTGGACAGCACTCGTAGCTGTCACCAGGAAAAGAGGACAAATGAAAAGCGGCCACATCTTTGGCTaGAGAACCAGAAACTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: YSWTALVAVTRKRGQMKSGHIFG*RTRNFY Trigger: ATAGAAGTTTCTGGTTCTTCAGCCAAAGATGTGGCC...GCTTTTCATTTGTCCTCTTTTCCTGGTGACAGCTACGAGTGCTGTCCAGCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
||
| CDS-3UTR TCA 90 bp | TGCATGAATACTCATTGCTCACTTCCACTCAACTACAGACACTGCTTGAGAACTATGGAGGTATCTCTGTaGCCCCTCATCACCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CMNTHCSLPLNYRHCLRTMEVSL*PLITIC Trigger: GCAGATGGTGATGAGGGGTCACAGAGATACCTCCAT...AGTTCTCAAGCAGTGTCTGTAGTTGAGTGGAAGTGAGCAATGAGTATTCATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
||
| CDS-3UTR GCA 90 bp | AAATCCCAGACCCCAAGCCGTAACCCTTCTGTAGCAGCTCATCTAACAGCAGCATGTTCCTCTGTTGGATaGAAGAATAACTCTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: KSQTPSRNPSVAAHLTAACSSVG*KNNSHP Trigger: TGGATGAGAGTTATTCTTGCATCCAACAGAGGAACA...TGCTGCTGTTAGATGAGCTGCTACAGAAGGGTTACGGCTTGGGGTCTGGGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026926.5 |
||
| CDS-3UTR GCA 90 bp | GTACTGATGCTGCACACAGGCTTAGCTCTGTGCCCACTTCAGAAATGGGACAGTTGTTCCTCTGTTGGATaGAAGAATAACTCTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLMLHTGLALCPLQKWDSCSSVG*KNNSHP Trigger: TGGATGAGAGTTATTCTTGCATCCAACAGAGGAACA...ACTGTCCCATTTCTGAAGTGGGCACAGAGCTAAGCCTGTGTGCAGCATCAGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
||
| CDS-3UTR CCA 90 bp | AAATCCCAGACCCCAAGCCGTAACCCTTCTGTAGCAGCTCATCTAACAGCAGCAACCAGACGTTACAATTaGGGAAATACCCAATTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KSQTPSRNPSVAAHLTAATRRYN*GNTQFH Trigger: ATGGAATTGGGTATTTCCCCAATTGTAACGTCTGGT...TGCTGCTGTTAGATGAGCTGCTACAGAAGGGTTACGGCTTGGGGTCTGGGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026926.5 |
||
| CDS-3UTR CCA 90 bp | GGGAAATCCCAGACCCCAAGCCGTAACCCTTCTGTAGCAGCTCATCTAACAGCAATACCAAATAATTTCTaGGCTCCATTGAACAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GKSQTPSRNPSVAAHLTAIPNNF*APLNRA Trigger: AGCTCTGTTCAATGGAGCCCAGAAATTATTTGGTAT...TGCTGTTAGATGAGCTGCTACAGAAGGGTTACGGCTTGGGGTCTGGGATTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026926.5 |
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| CDS-3UTR CCA 90 bp | CTGATGCTGCACACAGGCTTAGCTCTGTGCCCACTTCAGAAATGGGACAGTGAGATACCAAATAATTTCTaGGCTCCATTGAACAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LMLHTGLALCPLQKWDSEIPNNF*APLNRA Trigger: AGCTCTGTTCAATGGAGCCCAGAAATTATTTGGTAT...CTCACTGTCCCATTTCTGAAGTGGGCACAGAGCTAAGCCTGTGTGCAGCATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
||
| CDS-3UTR CCA 90 bp | ATACACTGCTTCCCAGCGTCATGGCTAACACTAGATGGACAGTGTCAACAAATAGCACCTTGTCTGTCCTaGTGGCCAGCAAATGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: IHCFPASWLTLDGQCQQIAPCLS*WPANET Trigger: TGTTTCATTTGCTGGCCACCAGGACAGACAAGGTGC...TATTTGTTGACACTGTCCATCTAGTGTTAGCCATGACGCTGGGAAGCAGTGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| CDS-3UTR CCA 90 bp | TTTTTGCCCATCCAGGCTGAGTGGCAGTTTGGGGATAGGATGAATCAAGTAGGGCGAACAGACAGCATCTaGGAAATGACGTACAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FLPIQAEWQFGDRMNQVGRTDSI*EMTYKF Trigger: AAACTTGTACGTCATTTCCCAGATGCTGTCTGTTCG...CCCTACTTGATTCATCCTATCCCCAAACTGCCACTCAGCCTGGATGGGCAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102981.10 |
||
| CDS-3UTR CCA 90 bp | TACAGCTGGACAGCACTCGTAGCTGTCACCAGGAAAAGAGGACAAATGAAAAGCGCTTGGCCACATCTTTaGCTGAAGAACCAGAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: YSWTALVAVTRKRGQMKSAWPHL*LKNQKL Trigger: AAGTTTCTGGTTCTTCAGCCAAAGATGTGGCCAAGC...GCTTTTCATTTGTCCTCTTTTCCTGGTGACAGCTACGAGTGCTGTCCAGCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
||
| CDS-3UTR CCA 90 bp | GAAATAACTTCAATGCTTGATTTTTGCCCATCCAGGCTGAGTGGCAGTTTGGGGTACCTGTTCAGCTCATaGACCATGGAGGTATCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EITSMLDFCPSRLSGSLGYLFSS*TMEVSL Trigger: CAGAGATACCTCCATGGTCCATGAGCTGAACAGGTA...CCCCAAACTGCCACTCAGCCTGGATGGGCAAAAATCAAGCATTGAAGTTATTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| CDS-3UTR TCA 90 bp | CAGACCCCAAGCCGTAACCCTTCTGTAGCAGCTCATCTAACAGCAGCACAATCAAATGTAAGCAATCCCTaGATAATGATAAGGAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: QTPSRNPSVAAHLTAAQSNVSNP*IMIRRQ Trigger: CTGTCTCCTTATCATTATTCAGGGATTGCTTACATT...TGATTGTGCTGCTGTTAGATGAGCTGCTACAGAAGGGTTACGGCTTGGGGTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026926.5 |
||
| CDS-3UTR TCA 90 bp | GACATGAAGTCCTTGCATGAATACTCATTGCTCACTTCCACTCAACTACAGACACTGGTGGCCAGCAAATaGAACAGAGCTATGACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DMKSLHEYSLLTSTQLQTLVASK*NRAMTA Trigger: TGCAGTCATAGCTCTGTTTCATTTGCTGGCCACCAG...TGTCTGTAGTTGAGTGGAAGTGAGCAATGAGTATTCATGCAAGGACTTCATGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| CDS-3UTR GCA 90 bp | ATACAGCTGGACAGCACTCGTAGCTGTCACCAGGAAAAGAGGACAAATGAAAAGCCCCTCATCACCATCTaGTGTTCTTTAAGTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IQLDSTRSCHQEKRTNEKPLITI*CSLSCL Trigger: CAAGCAACTTAAAGAACAGCAGATGGTGATGAGGGG...CTTTTCATTTGTCCTCTTTTCCTGGTGACAGCTACGAGTGCTGTCCAGCTGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
||
| CDS-3UTR GCA 90 bp | CAGCTGGTACTGATGCTGCACACAGGCTTAGCTCTGTGCCCACTTCAGAAATGGATAAATAATAGTGACTaGAAGCAGAATTCCAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: QLVLMLHTGLALCPLQKWINNSD*KQNSST Trigger: GGTACTGGAATTCTGCTTGCAGTCACTATTATTTAT...CCATTTCTGAAGTGGGCACAGAGCTAAGCCTGTGTGCAGCATCAGTACCAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102981.10 ENSMUST00000132908.4 ENSMUST00000193792.6 |
||
| CDS-3UTR CCA 90 bp | TTACACTTGGGTCCTGCTATGCATATCACAGACATGAAGTCCTTGCATGAATACCCTTGTCTGTCCTGGTaGCCAGCAAATGAAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LHLGPAMHITDMKSLHEYPCLSW*PANETE Trigger: CTCTGTTTCATTTGCTGGCCACCAGGACAGACAAGG...GTATTCATGCAAGGACTTCATGTCTGTGATATGCATAGCAGGACCCAAGTGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
||
| CDS-3UTR GCA 90 bp | GTACTGATGCTGCACACAGGCTTAGCTCTGTGCCCACTTCAGAAATGGGACAGTATAAATAATAGTGACTaGAAGCAGAATTCCAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: VLMLHTGLALCPLQKWDSINNSD*KQNSST Trigger: GGTACTGGAATTCTGCTTGCAGTCACTATTATTTAT...ACTGTCCCATTTCTGAAGTGGGCACAGAGCTAAGCCTGTGTGCAGCATCAGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102981.10 ENSMUST00000132908.4 ENSMUST00000193792.6 |
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| CDS-3UTR CCA 90 bp | GACATGAAGTCCTTGCATGAATACTCATTGCTCACTTCCACTCAACTACAGACATACCTGTTCAGCTCATaGACCATGGAGGTATCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DMKSLHEYSLLTSTQLQTYLFSS*TMEVSL Trigger: CAGAGATACCTCCATGGTCCATGAGCTGAACAGGTA...TGTCTGTAGTTGAGTGGAAGTGAGCAATGAGTATTCATGCAAGGACTTCATGTC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
||
| CDS-3UTR TCA 90 bp | ATGCTCCATAACTCATTAGGGAAGCTCAAAATACTGGAAAGTGGCAATCTGCACAATGAAACAGAGCTATaGCTGCACCTTCAAACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: MLHNSLGKLKILESGNLHNETEL*LHLQTP Trigger: CGGAGTTTGAAGGTGCAGTCATAGCTCTGTTTCATT...GTGCAGATTGCCACTTTCCAGTATTTTGAGCTTCCCTAATGAGTTATGGAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
||
| CDS-3UTR TCA 90 bp | AAGTTTATTGTCTACTGTTTACACTTGGGTCCTGCTATGCATATCACAGACATGCTGGTGGCCAGCAAATaGAACAGAGCTATGACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KFIVYCLHLGPAMHITDMLVASK*NRAMTA Trigger: TGCAGTCATAGCTCTGTTTCATTTGCTGGCCACCAG...CATGTCTGTGATATGCATAGCAGGACCCAAGTGTAAACAGTAGACAATAAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
||
| CDS-3UTR TCA 90 bp | TTACACTTGGGTCCTGCTATGCATATCACAGACATGAAGTCCTTGCATGAATACGGCCACATCTTTGGCTaGAGAACCAGAAACTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: LHLGPAMHITDMKSLHEYGHIFG*RTRNFY Trigger: ATAGAAGTTTCTGGTTCTTCAGCCAAAGATGTGGCC...GTATTCATGCAAGGACTTCATGTCTGTGATATGCATAGCAGGACCCAAGTGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
||
| CDS-3UTR GCA 90 bp | ACACTGCTTCCCAGCGTCATGGCTAACACTAGATGGACAGTGTCAACAAATAATGCTCCAGCTAACAACTaGATAATCAAACCAGACGTT | + |
|
Preference number: 4 (lower is better) Translates to: TLLPSVMANTRWTVSTNNAPANN*IIKPDV Trigger: AACGTCTGGTTTGATTATGCAGTTGTTAGCTGGAGC...ATTATTTGTTGACACTGTCCATCTAGTGTTAGCCATGACGCTGGGAAGCAGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
||
| CDS-3UTR GCA 90 bp | TTACACTTGGGTCCTGCTATGCATATCACAGACATGAAGTCCTTGCATGAATACCCCCTCATCACCATCTaGTGTTCTTTAAGTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LHLGPAMHITDMKSLHEYPLITI*CSLSCL Trigger: CAAGCAACTTAAAGAACAGCAGATGGTGATGAGGGG...GTATTCATGCAAGGACTTCATGTCTGTGATATGCATAGCAGGACCCAAGTGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
||
| CDS-3UTR CCA 90 bp | CATCTAACAGCAGCACAATCAAACCAGCAACAAACAATCTCAAAACCCTACGTTCACACACTGATCCAATaGCTCTTCAGTGTAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: HLTAAQSNQQQTISKPYVHTLIQ*LFSVAT Trigger: TGTGGCTACACTGAAGAGCCATTGGATCAGTGTGTG...AACGTAGGGTTTTGAGATTGTTTGTTGCTGGTTTGATTGTGCTGCTGTTAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026926.5 |
||
| CDS-3UTR CCA 90 bp | TTACACTTGGGTCCTGCTATGCATATCACAGACATGAAGTCCTTGCATGAATACGCTTGGCCACATCTTTaGCTGAAGAACCAGAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: LHLGPAMHITDMKSLHEYAWPHL*LKNQKL Trigger: AAGTTTCTGGTTCTTCAGCCAAAGATGTGGCCAAGC...GTATTCATGCAAGGACTTCATGTCTGTGATATGCATAGCAGGACCCAAGTGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
||
| CDS-3UTR TCA 90 bp | GACATGAAGTCCTTGCATGAATACTCATTGCTCACTTCCACTCAACTACAGACATTCCTTTCAGGCTTCTaGATTTCTGGTAGAACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DMKSLHEYSLLTSTQLQTFLSGF*ISGRTA Trigger: TGCAGTTCTACCAGAAATTCAGAAGCCTGAAAGGAA...TGTCTGTAGTTGAGTGGAAGTGAGCAATGAGTATTCATGCAAGGACTTCATGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
||
| CDS-3UTR CCA 90 bp | CACTTGGGTCCTGCTATGCATATCACAGACATGAAGTCCTTGCATGAATACTCAACCAGACGTTACAATTaGGGAAATACCCAATTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HLGPAMHITDMKSLHEYSTRRYN*GNTQFH Trigger: ATGGAATTGGGTATTTCCCCAATTGTAACGTCTGGT...TGAGTATTCATGCAAGGACTTCATGTCTGTGATATGCATAGCAGGACCCAAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
||
| CDS-3UTR CCA 90 bp | ATGCTCCATAACTCATTAGGGAAGCTCAAAATACTGGAAAGTGGCAATCTGCACCAGACTGGAGGATTATaGGAATATTCGACGTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: MLHNSLGKLKILESGNLHQTGGL*EYSTCR Trigger: TCTACACGTCGAATATTCCCATAATCCTCCAGTCTG...GTGCAGATTGCCACTTTCCAGTATTTTGAGCTTCCCTAATGAGTTATGGAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102981.10 |
||
| CDS-3UTR TCA 90 bp | TTACACTTGGGTCCTGCTATGCATATCACAGACATGAAGTCCTTGCATGAATACACCTTCTCTCTAAACTaGATTTTCCTTTCAGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LHLGPAMHITDMKSLHEYTFSLN*IFLSGF Trigger: GAAGCCTGAAAGGAAAATTCAGTTTAGAGAGAAGGT...GTATTCATGCAAGGACTTCATGTCTGTGATATGCATAGCAGGACCCAAGTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
||
| CDS-3UTR TCA 90 bp | AAGTTTATTGTCTACTGTTTACACTTGGGTCCTGCTATGCATATCACAGACATGATTTCTGGGCTCCATTaGACAGAGCTCTATCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KFIVYCLHLGPAMHITDMISGLH*TELYLW Trigger: CCAAAGATAGAGCTCTGTTCAATGGAGCCCAGAAAT...CATGTCTGTGATATGCATAGCAGGACCCAAGTGTAAACAGTAGACAATAAACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
||
| CDS-3UTR TCA 90 bp | CATAACTCATTAGGGAAGCTCAAAATACTGGAAAGTGGCAATCTGCACTGCACTACAGCATCTGGGAAATaGCGTACAAGTTTGAAACTA | + |
|
Preference number: 4 (lower is better) Translates to: HNSLGKLKILESGNLHCTTASGK*RTSLKL Trigger: TAGTTTCAAACTTGTACGTCATTTCCCAGATGCTGT...AGTGCAGTGCAGATTGCCACTTTCCAGTATTTTGAGCTTCCCTAATGAGTTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102981.10 |
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| CDS-3UTR GCA 90 bp | TGCATGAATACTCATTGCTCACTTCCACTCAACTACAGACACTGCTTGAGAACTTGTTCCTCTGTTGGATaGAAGAATAACTCTCATCCA | + |
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Preference number: 4 (lower is better) Translates to: CMNTHCSLPLNYRHCLRTCSSVG*KNNSHP Trigger: TGGATGAGAGTTATTCTTGCATCCAACAGAGGAACA...AGTTCTCAAGCAGTGTCTGTAGTTGAGTGGAAGTGAGCAATGAGTATTCATGCA 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| CDS-3UTR GCA 90 bp | AAGTTTATTGTCTACTGTTTACACTTGGGTCCTGCTATGCATATCACAGACATGAAACAGAGCTATGACTaGACCTTCAAACTCCGTACC | + |
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Preference number: 4 (lower is better) Translates to: KFIVYCLHLGPAMHITDMKQSYD*TFKLRT Trigger: GGTACGGAGTTTGAAGGTGCAGTCATAGCTCTGTTT...CATGTCTGTGATATGCATAGCAGGACCCAAGTGTAAACAGTAGACAATAAACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| CDS-3UTR GCA 90 bp | GAATACTCATTGCTCACTTCCACTCAACTACAGACACTGCTTGAGAACTGGGTCATAAATAATAGTGACTaGAAGCAGAATTCCAGTACC | + |
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Preference number: 4 (lower is better) Translates to: EYSLLTSTQLQTLLENWVINNSD*KQNSST Trigger: GGTACTGGAATTCTGCTTGCAGTCACTATTATTTAT...GACCCAGTTCTCAAGCAGTGTCTGTAGTTGAGTGGAAGTGAGCAATGAGTATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| CDS-3UTR TCA 90 bp | AAAGTTTATTGTCTACTGTTTACACTTGGGTCCTGCTATGCATATCACAGACATACCCCTGAAAATAGATaGCGACAGCAAACACGAACA | + |
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Preference number: 4 (lower is better) Translates to: KVYCLLFTLGSCYAYHRHTPENR*RQQTRT Trigger: TGTTCGTGTTTGCTGTCGTCATCTATTTTCAGGGGT...ATGTCTGTGATATGCATAGCAGGACCCAAGTGTAAACAGTAGACAATAAACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102981.10 |
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| CDS-3UTR CCA 90 bp | AAAGTTTATTGTCTACTGTTTACACTTGGGTCCTGCTATGCATATCACAGACATACCAGACGTTACAATTaGGGAAATACCCAATTCCAT | + |
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Preference number: 4 (lower is better) Translates to: KVYCLLFTLGSCYAYHRHTRRYN*GNTQFH Trigger: ATGGAATTGGGTATTTCCCCAATTGTAACGTCTGGT...ATGTCTGTGATATGCATAGCAGGACCCAAGTGTAAACAGTAGACAATAAACTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| CDS-3UTR CAA 90 bp | CTGATGCTGCACACAGGCTTAGCTCTGTGCCCACTTCAGAAATGGGACAGTGAGCTGCTGTTCTTTAAGTaGCTTGGCCACGGCCCACTG | + |
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Preference number: 5 (lower is better) Translates to: LMLHTGLALCPLQKWDSELLFFK*LGHGPL Trigger: CAGTGGGCCGTGGCCAAGCAACTTAAAGAACAGCAG...CTCACTGTCCCATTTCTGAAGTGGGCACAGAGCTAAGCCTGTGTGCAGCATCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132908.4 |
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| CDS-3UTR CAA 90 bp | GGGAAATCCCAGACCCCAAGCCGTAACCCTTCTGTAGCAGCTCATCTAACAGCAAACAGAGCTCTATCTTaGGGTGTGTCTCCAACTTCA | + |
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Preference number: 5 (lower is better) Translates to: GKSQTPSRNPSVAAHLTANRALS*GVSPTS Trigger: TGAAGTTGGAGACACACCCAAAGATAGAGCTCTGTT...TGCTGTTAGATGAGCTGCTACAGAAGGGTTACGGCTTGGGGTCTGGGATTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026926.5 |
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| CDS-3UTR CAA 90 bp | TCCACTCAACTACAGACACTGCTTGAGAACTGGGTCTTGCTTTGGGGACGAGGGAATTTCTGGGCTCCATaGAACAGAGCTCTATCTTTG | + |
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Preference number: 5 (lower is better) Translates to: STQLQTLLENWVLLWGRGNFWAP*NRALSL Trigger: CAAAGATAGAGCTCTGTTCAATGGAGCCCAGAAATT...CCCTCGTCCCCAAAGCAAGACCCAGTTCTCAAGCAGTGTCTGTAGTTGAGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| CDS-3UTR CAA 90 bp | AAATCCCAGACCCCAAGCCGTAACCCTTCTGTAGCAGCTCATCTAACAGCAGCAAACCAGACGTTACAATaGGGGAAATACCCAATTCCA | + |
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Preference number: 5 (lower is better) Translates to: KSQTPSRNPSVAAHLTAANQTLQ*GKYPIP Trigger: TGGAATTGGGTATTTCCCCAATTGTAACGTCTGGTT...TGCTGCTGTTAGATGAGCTGCTACAGAAGGGTTACGGCTTGGGGTCTGGGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026926.5 |
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| CDS-3UTR CAA 90 bp | GATGTTGGTGGCAATAAAGAGGGAAATCCCAGACCCCAAGCCGTAACCCTTCTGAATTTCTGGGCTCCATaGAACAGAGCTCTATCTTTG | + |
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Preference number: 5 (lower is better) Translates to: DVGGNKEGNPRPQAVTLLNFWAP*NRALSL Trigger: CAAAGATAGAGCTCTGTTCAATGGAGCCCAGAAATT...CAGAAGGGTTACGGCTTGGGGTCTGGGATTTCCCTCTTTATTGCCACCAACATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026926.5 |
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| CDS-3UTR CAA 90 bp | TACAGCTGGACAGCACTCGTAGCTGTCACCAGGAAAAGAGGACAAATGAAAAGCTGCTTGGCCACATCTTaGGCTGAAGAACCAGAAACT | + |
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Preference number: 5 (lower is better) Translates to: YSWTALVAVTRKRGQMKSCLATS*AEEPET Trigger: AGTTTCTGGTTCTTCAGCCAAAGATGTGGCCAAGCA...GCTTTTCATTTGTCCTCTTTTCCTGGTGACAGCTACGAGTGCTGTCCAGCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| CDS-3UTR CAA 90 bp | TACAGCTGGACAGCACTCGTAGCTGTCACCAGGAAAAGAGGACAAATGAAAAGCAACCAGACGTTACAATaGGGGAAATACCCAATTCCA | + |
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Preference number: 5 (lower is better) Translates to: YSWTALVAVTRKRGQMKSNQTLQ*GKYPIP Trigger: TGGAATTGGGTATTTCCCCAATTGTAACGTCTGGTT...GCTTTTCATTTGTCCTCTTTTCCTGGTGACAGCTACGAGTGCTGTCCAGCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| CDS-3UTR CAA 90 bp | GTACTGATGCTGCACACAGGCTTAGCTCTGTGCCCACTTCAGAAATGGGACAGTAAGTTTACTAAGAAGTaGCCACTAAATCGAACAGAC | + |
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Preference number: 5 (lower is better) Translates to: VLMLHTGLALCPLQKWDSKFTKK*PLNRTD Trigger: GTCTGTTCGATTTAGTGGCAACTTCTTAGTAAACTT...ACTGTCCCATTTCTGAAGTGGGCACAGAGCTAAGCCTGTGTGCAGCATCAGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000132908.4 |
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| CDS-3UTR CAA 90 bp | CACTTGGGTCCTGCTATGCATATCACAGACATGAAGTCCTTGCATGAATACTCACTGCTGTTCTTTAAGTaGCTTGGCCACATCTTTGGC | + |
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Preference number: 5 (lower is better) Translates to: HLGPAMHITDMKSLHEYSLLFFK*LGHIFG Trigger: GCCAAAGATGTGGCCAAGCAACTTAAAGAACAGCAG...TGAGTATTCATGCAAGGACTTCATGTCTGTGATATGCATAGCAGGACCCAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| CDS-3UTR CAA 90 bp | ATACAGCTGGACAGCACTCGTAGCTGTCACCAGGAAAAGAGGACAAATGAAAAGTGTTCTTTAAGTTGCTaGGCCACATCTTTGGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: IQLDSTRSCHQEKRTNEKCSLSC*ATSLAE Trigger: TTCAGCCAAAGATGTGGCCAAGCAACTTAAAGAACA...CTTTTCATTTGTCCTCTTTTCCTGGTGACAGCTACGAGTGCTGTCCAGCTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| CDS-3UTR CAA 90 bp | TTACACTTGGGTCCTGCTATGCATATCACAGACATGAAGTCCTTGCATGAATACAACAGAGCTCTATCTTaGGGTGTGTCTCCAACTTCA | + |
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Preference number: 5 (lower is better) Translates to: LHLGPAMHITDMKSLHEYNRALS*GVSPTS Trigger: TGAAGTTGGAGACACACCCAAAGATAGAGCTCTGTT...GTATTCATGCAAGGACTTCATGTCTGTGATATGCATAGCAGGACCCAAGTGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| CDS-3UTR CAA 90 bp | AAGTTTATTGTCTACTGTTTACACTTGGGTCCTGCTATGCATATCACAGACATGTGCTTGGCCACATCTTaGGCTGAAGAACCAGAAACT | + |
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Preference number: 5 (lower is better) Translates to: KFIVYCLHLGPAMHITDMCLATS*AEEPET Trigger: AGTTTCTGGTTCTTCAGCCAAAGATGTGGCCAAGCA...CATGTCTGTGATATGCATAGCAGGACCCAAGTGTAAACAGTAGACAATAAACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| CDS-3UTR CAA 90 bp | CATAACTCATTAGGGAAGCTCAAAATACTGGAAAGTGGCAATCTGCACTGCACTTGTTCTTTAAGTTGCTaGGCCACATCTTTGGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: HNSLGKLKILESGNLHCTCSLSC*ATSLAE Trigger: TTCAGCCAAAGATGTGGCCAAGCAACTTAAAGAACA...AGTGCAGTGCAGATTGCCACTTTCCAGTATTTTGAGCTTCCCTAATGAGTTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| CDS-3UTR CAA 90 bp | AAAGTTTATTGTCTACTGTTTACACTTGGGTCCTGCTATGCATATCACAGACATCTGCTGTTCTTTAAGTaGCTTGGCCACATCTTTGGC | + |
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Preference number: 5 (lower is better) Translates to: KVYCLLFTLGSCYAYHRHLLFFK*LGHIFG Trigger: GCCAAAGATGTGGCCAAGCAACTTAAAGAACAGCAG...ATGTCTGTGATATGCATAGCAGGACCCAAGTGTAAACAGTAGACAATAAACTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| CDS-3UTR CAA 90 bp | AAGTTTATTGTCTACTGTTTACACTTGGGTCCTGCTATGCATATCACAGACATGAATTTCTGGGCTCCATaGAACAGAGCTCTATCTTTG | + |
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Preference number: 5 (lower is better) Translates to: KFIVYCLHLGPAMHITDMNFWAP*NRALSL Trigger: CAAAGATAGAGCTCTGTTCAATGGAGCCCAGAAATT...CATGTCTGTGATATGCATAGCAGGACCCAAGTGTAAACAGTAGACAATAAACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| CDS-3UTR CAA 90 bp | GACATGAAGTCCTTGCATGAATACTCATTGCTCACTTCCACTCAACTACAGACAAAGTTTACTAAGAAGTaGCCACTAAATCGAACAGAC | + |
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Preference number: 5 (lower is better) Translates to: DMKSLHEYSLLTSTQLQTKFTKK*PLNRTD Trigger: GTCTGTTCGATTTAGTGGCAACTTCTTAGTAAACTT...TGTCTGTAGTTGAGTGGAAGTGAGCAATGAGTATTCATGCAAGGACTTCATGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102981.10 |
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| CDS-3UTR CAA 90 bp | AAAGTTTATTGTCTACTGTTTACACTTGGGTCCTGCTATGCATATCACAGACATAACCAGACGTTACAATaGGGGAAATACCCAATTCCA | + |
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Preference number: 5 (lower is better) Translates to: KVYCLLFTLGSCYAYHRHNQTLQ*GKYPIP Trigger: TGGAATTGGGTATTTCCCCAATTGTAACGTCTGGTT...ATGTCTGTGATATGCATAGCAGGACCCAAGTGTAAACAGTAGACAATAAACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| CDS GCA 72 bp | CTTGATAGGATAGCTACTGTACTGTCCACGATACCGTaGCGACTTAATGGGCAAGTCAACACGAAACCCCTG | + |
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Preference number: 6 (lower is better) Translates to: LDRIATVLSTIP*RLNGQVNTKPL Trigger: CAGGGGTTTCGTGTTGACTTGCCCATTAAGTCGGCACGGTATCGTGGACAGTACAGTAGCTATCCTATCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102981.10 |
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| CDS CAA 90 bp | CCCCCACTGACATCGGCCCACTGTCCTAGTAAGTTTACTAAGAAGTaGCCACTAAATCGAACAGACAGCATCTGGGAAATGACGTACAAG | + |
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Preference number: 6 (lower is better) Translates to: PPLTSAHCPSKFTKK*PLNRTDSIWEMTYK Trigger: CTTGTACGTCATTTCCCAGATGCTGTCTGTTCGATTTAGTGGCAACTTCTTAGTAAACTTACTAGGACAGTGGGCCGATGTCAGTGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102981.10 |
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| CDS CAA 90 bp | AGTTGCTTGGCCACGGCCCACTGTCCTAGTAAGTTTACTAAGAAGTaGCCACTAAATCGAACAGACAGCATCTGGGAAATGACGTACAAG | + |
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Preference number: 6 (lower is better) Translates to: SCLATAHCPSKFTKK*PLNRTDSIWEMTYK Trigger: CTTGTACGTCATTTCCCAGATGCTGTCTGTTCGATTTAGTGGCAACTTCTTAGTAAACTTACTAGGACAGTGGGCCGTGGCCAAGCAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132908.4 |
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| CDS TCA 72 bp | TCATCCAGTAGAAGGGATCTGCAGAGTCCGATGACATaGTCCCAAACAGCGGAATCTGACAGCATACTAAGA | + |
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Preference number: 6 (lower is better) Translates to: SSSRRDLQSPMT*SQTAESDSILR Trigger: TCTTAGTATGCTGTCAGATTCCGCTGTTTGGGATCATGTCATCGGACTCTGCAGATCCCTTCTACTGGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026926.5 ENSMUST00000102981.10 ENSMUST00000193792.6 |
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| CDS CAA 72 bp | GCCACGGCCCACTGTCCTAGTAAGTTTACTAAGAAGTaGCCACTAAATCGAACAGACAGCATCTGGGAAATG | + |
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Preference number: 6 (lower is better) Translates to: ATAHCPSKFTKK*PLNRTDSIWEM Trigger: CATTTCCCAGATGCTGTCTGTTCGATTTAGTGGCAACTTCTTAGTAAACTTACTAGGACAGTGGGCCGTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132908.4 |
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| CDS CAA 72 bp | ACATCGGCCCACTGTCCTAGTAAGTTTACTAAGAAGTaGCCACTAAATCGAACAGACAGCATCTGGGAAATG | + |
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Preference number: 6 (lower is better) Translates to: TSAHCPSKFTKK*PLNRTDSIWEM Trigger: CATTTCCCAGATGCTGTCTGTTCGATTTAGTGGCAACTTCTTAGTAAACTTACTAGGACAGTGGGCCGATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102981.10 |
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