Pregenerated sensors for SEC61A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030082Ensembl transcript IDs: ENSMUST00000032168.7
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGCTGTGGACTCCAGGCCTGACACTCCCCAGCACAGCCCAGAGCTaGGGACTCTGCACCTGCTTGCCAGAAGCTGTGGAGTCCCTAGGG | + |
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Preference number: 1 (lower is better) Translates to: RLWTPGLTLPSTAQS*GLCTCLPEAVESLG Trigger: CCCTAGGGACTCCACAGCTTCTGGCAAGCAGGTGCAGAGTCCCCAGCTCTGGGCTGTGCTGGGGAGTGTCAGGCCTGGAGTCCACAGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR TCA 90 bp | CCACTGAGGTGTGGTGGACCCAGGTGTCTTGCTGCTGGCAGGCTGTaGCCACATGGCTGCACACCCACCAGAGCTCCTGCCCCCTTGTGT | + |
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Preference number: 1 (lower is better) Translates to: PLRCGGPRCLAAGRL*PHGCTPTRAPAPLC Trigger: ACACAAGGGGGCAGGAGCTCTGGTGGGTGTGCAGCCATGTGGTCACAGCCTGCCAGCAGCAAGACACCTGGGTCCACCACACCTCAGTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR GCA 90 bp | GGGCAGTGGGAAGACCCTGTGGACTGGGAGGGCACCAGGCTCCTCTaGTCAGGACTGGGTCTAGACAAGGCCACGTGTGATATGGTGTGC | + |
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Preference number: 1 (lower is better) Translates to: GQWEDPVDWEGTRLL*SGLGLDKATCDMVC Trigger: GCACACCATATCACACGTGGCCTTGTCTAGACCCAGTCCTGAGCAGAGGAGCCTGGTGCCCTCCCAGTCCACAGGGTCTTCCCACTGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR CCA 90 bp | AGCCCCGGGTCAGGGAGGCATTCTGCTACTTCCACTGAGGTGTGGTaGACCCAGGTGTCTTGCTGCTGGCAGGCTGTGACCACATGGCTG | + |
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Preference number: 1 (lower is better) Translates to: SPGSGRHSATSTEVW*TQVSCCWQAVTTWL Trigger: CAGCCATGTGGTCACAGCCTGCCAGCAGCAAGACACCTGGGTCCACCACACCTCAGTGGAAGTAGCAGAATGCCTCCCTGACCCGGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR CCA 90 bp | TCTGCTACTTCCACTGAGGTGTGGTGGACCCAGGTGTCTTGCTGCTaGCAGGCTGTGACCACATGGCTGCACACCCACCAGAGCTCCTGC | + |
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Preference number: 1 (lower is better) Translates to: SATSTEVWWTQVSCC*QAVTTWLHTHQSSC Trigger: GCAGGAGCTCTGGTGGGTGTGCAGCCATGTGGTCACAGCCTGCCAGCAGCAAGACACCTGGGTCCACCACACCTCAGTGGAAGTAGCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR CCA 90 bp | AAGAGCCCCGGGTCAGGGAGGCATTCTGCTACTTCCACTGAGGTGTaGTGGACCCAGGTGTCTTGCTGCTGGCAGGCTGTGACCACATGG | + |
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Preference number: 1 (lower is better) Translates to: KSPGSGRHSATSTEV*WTQVSCCWQAVTTW Trigger: CCATGTGGTCACAGCCTGCCAGCAGCAAGACACCTGGGTCCACCACACCTCAGTGGAAGTAGCAGAATGCCTCCCTGACCCGGGGCTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR GCA 90 bp | CATTCTGCTACTTCCACTGAGGTGTGGTGGACCCAGGTGTCTTGCTaGTGGCAGGCTGTGACCACATGGCTGCACACCCACCAGAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: HSATSTEVWWTQVSC*WQAVTTWLHTHQSS Trigger: GGAGCTCTGGTGGGTGTGCAGCCATGTGGTCACAGCCTGCCAGCAGCAAGACACCTGGGTCCACCACACCTCAGTGGAAGTAGCAGAATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR GCA 90 bp | AGGCATTCTGCTACTTCCACTGAGGTGTGGTGGACCCAGGTGTCTTaGTGCTGGCAGGCTGTGACCACATGGCTGCACACCCACCAGAGC | + |
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Preference number: 1 (lower is better) Translates to: RHSATSTEVWWTQVS*CWQAVTTWLHTHQS Trigger: GCTCTGGTGGGTGTGCAGCCATGTGGTCACAGCCTGCCAGCAGCAAGACACCTGGGTCCACCACACCTCAGTGGAAGTAGCAGAATGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR-3UTR TCA 90 bp | ACTCCAGGCCTGACACTCCCCAGCACAGCCCAGAGCTGGGGACTCTGCACCTGCGCTGCTGGCAGGCTGTaGCCACATGGCTGCACACCC | + |
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Preference number: 2 (lower is better) Translates to: TPGLTLPSTAQSWGLCTCAAGRL*PHGCTP Trigger: GGGTGTGCAGCCATGTGGTCACAGCCTGCCAGCAGC...GCAGGTGCAGAGTCCCCAGCTCTGGGCTGTGCTGGGGAGTGTCAGGCCTGGAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR-3UTR CCA 90 bp | ACTCCAGGCCTGACACTCCCCAGCACAGCCCAGAGCTGGGGACTCTGCACCTGCAGTGGGAAGACCCTGTaGACTGGGAGGGCACCAGGC | + |
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Preference number: 2 (lower is better) Translates to: TPGLTLPSTAQSWGLCTCSGKTL*TGRAPG Trigger: GCCTGGTGCCCTCCCAGTCCACAGGGTCTTCCCACT...GCAGGTGCAGAGTCCCCAGCTCTGGGCTGTGCTGGGGAGTGTCAGGCCTGGAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR-3UTR GCA 90 bp | CCTGACACTCCCCAGCACAGCCCAGAGCTGGGGACTCTGCACCTGCTTGCCAGAGGCAGCTGGGACCCTTaGAGCTGCCAGGCACTGAGA | + |
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Preference number: 2 (lower is better) Translates to: PDTPQHSPELGTLHLLARGSWDP*SCQALR Trigger: TCTCAGTGCCTGGCAGCTGCAAGGGTCCCAGCTGCC...TCTGGCAAGCAGGTGCAGAGTCCCCAGCTCTGGGCTGTGCTGGGGAGTGTCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR-3UTR CCA 90 bp | ACTCCAGGCCTGACACTCCCCAGCACAGCCCAGAGCTGGGGACTCTGCACCTGCCTTCCTGGGCAGTTCTaGAGCCTGTGCCCTCACCCT | + |
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Preference number: 2 (lower is better) Translates to: TPGLTLPSTAQSWGLCTCLPGQF*SLCPHP Trigger: AGGGTGAGGGCACAGGCTCCAGAACTGCCCAGGAAG...GCAGGTGCAGAGTCCCCAGCTCTGGGCTGTGCTGGGGAGTGTCAGGCCTGGAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR-3UTR CCA 90 bp | ACTCCAGGCCTGACACTCCCCAGCACAGCCCAGAGCTGGGGACTCTGCACCTGCTCCACTGAGGTGTGGTaGACCCAGGTGTCTTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: TPGLTLPSTAQSWGLCTCSTEVW*TQVSCC Trigger: GCAGCAAGACACCTGGGTCCACCACACCTCAGTGGA...GCAGGTGCAGAGTCCCCAGCTCTGGGCTGTGCTGGGGAGTGTCAGGCCTGGAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR-3UTR TCA 90 bp | AGAGCCCCGGGTCAGGGAGGCATTCTGCTACTTCCACTGAGGTGTGGTGGACCCTCCTGCCCCCTTGTGTaGACAGCTGGACCCTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: RAPGQGGILLLPLRCGGPSCPLV*TAGPSV Trigger: CACAGAGGGTCCAGCTGTTCACACAAGGGGGCAGGA...GGGTCCACCACACCTCAGTGGAAGTAGCAGAATGCCTCCCTGACCCGGGGCTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR-3UTR GCA 90 bp | ACTCCAGGCCTGACACTCCCCAGCACAGCCCAGAGCTGGGGACTCTGCACCTGCACGTGTGATATGGTGTaGGCCCTGGGCTGTGTGCAA | + |
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Preference number: 2 (lower is better) Translates to: TPGLTLPSTAQSWGLCTCTCDMV*ALGCVQ Trigger: TTGCACACAGCCCAGGGCGCACACCATATCACACGT...GCAGGTGCAGAGTCCCCAGCTCTGGGCTGTGCTGGGGAGTGTCAGGCCTGGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR-3UTR CCA 90 bp | AGAGCCCCGGGTCAGGGAGGCATTCTGCTACTTCCACTGAGGTGTGGTGGACCCCAGGCTGTGACCACATaGCTGCACACCCACCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: RAPGQGGILLLPLRCGGPQAVTT*LHTHQS Trigger: GCTCTGGTGGGTGTGCAGCCATGTGGTCACAGCCTG...GGGTCCACCACACCTCAGTGGAAGTAGCAGAATGCCTCCCTGACCCGGGGCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR-3UTR GCA 90 bp | AGTGGGAAGACCCTGTGGACTGGGAGGGCACCAGGCTCCTCTGCTCAGGACTGGTATGCCACAGTAGCATaGTCCAGCAGTAAGAGCACC | + |
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Preference number: 2 (lower is better) Translates to: SGKTLWTGRAPGSSAQDWYATVA*SSSKST Trigger: GGTGCTCTTACTGCTGGAGCATGCTACTGTGGCATA...CCAGTCCTGAGCAGAGGAGCCTGGTGCCCTCCCAGTCCACAGGGTCTTCCCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR-3UTR CCA 90 bp | CTGGGTCTAGACAAGGCCACGTGTGATATGGTGTGCGCCCTGGGCTGTGTGCAAAGTGACCCCCTTTGCTaGCAACAGCAGACACGTGGA | + |
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Preference number: 2 (lower is better) Translates to: LGLDKATCDMVCALGCVQSDPLC*QQQTRG Trigger: TCCACGTGTCTGCTGTTGCCAGCAAAGGGGGTCACT...TTGCACACAGCCCAGGGCGCACACCATATCACACGTGGCCTTGTCTAGACCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR-3UTR TCA 90 bp | ACTCCAGGCCTGACACTCCCCAGCACAGCCCAGAGCTGGGGACTCTGCACCTGCTCCCTAAGAGATCTCTaGACCTGTGATTTCCTTACA | + |
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Preference number: 2 (lower is better) Translates to: TPGLTLPSTAQSWGLCTCSLRDL*TCDFLT Trigger: TGTAAGGAAATCACAGGTTCAGAGATCTCTTAGGGA...GCAGGTGCAGAGTCCCCAGCTCTGGGCTGTGCTGGGGAGTGTCAGGCCTGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR-3UTR GCA 90 bp | CTGGGTCTAGACAAGGCCACGTGTGATATGGTGTGCGCCCTGGGCTGTGTGCAACAGACATCTAGTTTGTaGTTCCTTCAACCAGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: LGLDKATCDMVCALGCVQQTSSL*FLQPGP Trigger: TGGCCCTGGTTGAAGGAAGCACAAACTAGATGTCTG...TTGCACACAGCCCAGGGCGCACACCATATCACACGTGGCCTTGTCTAGACCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR-3UTR CCA 90 bp | AGCAGACACGTGGACCCTGCTGATCCTCACCTGTCTGCACGCCCAGATGAGATGTGTTATCACACCCCCTaGCCATCAGCTAACAATTCA | + |
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Preference number: 2 (lower is better) Translates to: SRHVDPADPHLSARPDEMCYHTP*PSANNS Trigger: TGAATTGTTAGCTGATGGCCAGGGGGTGTGATAACA...CATCTCATCTGGGCGTGCAGACAGGTGAGGATCAGCAGGGTCCACGTGTCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR-3UTR GCA 90 bp | CAAACTACAGCCTTTGTACCCTTGCTGTTAAACCGTTTCTGTCTTAAGAGGGGCGCCAGTGACCCCCTTTaGTGGCAACAGCAGACACGT | + |
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Preference number: 2 (lower is better) Translates to: QTTAFVPLLLNRFCLKRGASDPL*WQQQTR Trigger: ACGTGTCTGCTGTTGCCAGCAAAGGGGGTCACTGGC...GCCCCTCTTAAGACAGAAACGGTTTAACAGCAAGGGTACAAAGGCTGTAGTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR-3UTR CCA 90 bp | AAGCTGACAAGCGCTAATTGCTCTGGCCTCAAACTACAGCCTTTGTACCCTTGCGAAAATTCTAAAACCTaGAACAGGAAGTTCTCAGTA | + |
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Preference number: 2 (lower is better) Translates to: KLTSANCSGLKLQPLYPCENSKT*NRKFSV Trigger: TACTGAGAACTTCCTGTTCCAGGTTTTAGAATTTTC...GCAAGGGTACAAAGGCTGTAGTTTGAGGCCAGAGCAATTAGCGCTTGTCAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR-3UTR GCA 90 bp | CAAACTACAGCCTTTGTACCCTTGCTGTTAAACCGTTTCTGTCTTAAGAGGGGCCCAGGCACTGAGAAGTaGAAGGGTTTAAATAAAAAT | + |
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Preference number: 2 (lower is better) Translates to: QTTAFVPLLLNRFCLKRGPGTEK*KGLNKN Trigger: ATTTTTATTTAAACCCTTGCACTTCTCAGTGCCTGG...GCCCCTCTTAAGACAGAAACGGTTTAACAGCAAGGGTACAAAGGCTGTAGTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR-3UTR CAA 90 bp | CCTGACACTCCCCAGCACAGCCCAGAGCTGGGGACTCTGCACCTGCTTGCCAGAGGGCAGCTGGGACCCTaGCAGCTGCCAGGCACTGAG | + |
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Preference number: 3 (lower is better) Translates to: PDTPQHSPELGTLHLLARGQLGP*QLPGTE Trigger: CTCAGTGCCTGGCAGCTGCAAGGGTCCCAGCTGCCC...TCTGGCAAGCAGGTGCAGAGTCCCCAGCTCTGGGCTGTGCTGGGGAGTGTCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR GCA 72 bp | CTGACACTCCCCAGCACAGCCCAGAGCTGGGGACTCTaGACCTGCTTGCCAGAAGCTGTGGAGTCCCTAGGG | + |
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Preference number: 3 (lower is better) Translates to: LTLPSTAQSWGL*TCLPEAVESLG Trigger: CCCTAGGGACTCCACAGCTTCTGGCAAGCAGGTGCAGAGTCCCCAGCTCTGGGCTGTGCTGGGGAGTGTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR CCA 72 bp | TCCTTCAACCAGGGCCACAGACTGCCTCGGGGCAGCTaGGACCCTTGCAGCTGCCAGGCACTGAGAAGTGCA | + |
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Preference number: 3 (lower is better) Translates to: SFNQGHRLPRGS*DPCSCQALRSA Trigger: TGCACTTCTCAGTGCCTGGCAGCTGCAAGGGTCCCAGCTGCCCCGAGGCAGTCTGTGGCCCTGGTTGAAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR TCA 72 bp | GAGCCCCGGGTCAGGGAGGCATTCTGCTACTTCCACTaGGGTGTGGTGGACCCAGGTGTCTTGCTGCTGGCA | + |
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Preference number: 3 (lower is better) Translates to: EPRVREAFCYFH*GVVDPGVLLLA Trigger: TGCCAGCAGCAAGACACCTGGGTCCACCACACCTCAGTGGAAGTAGCAGAATGCCTCCCTGACCCGGGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR CCA 72 bp | TCCACTGAGGTGTGGTGGACCCAGGTGTCTTGCTGCTaGCAGGCTGTGACCACATGGCTGCACACCCACCAG | + |
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Preference number: 3 (lower is better) Translates to: STEVWWTQVSCC*QAVTTWLHTHQ Trigger: CTGGTGGGTGTGCAGCCATGTGGTCACAGCCTGCCAGCAGCAAGACACCTGGGTCCACCACACCTCAGTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR GCA 72 bp | ACTTCCACTGAGGTGTGGTGGACCCAGGTGTCTTGCTaGTGGCAGGCTGTGACCACATGGCTGCACACCCAC | + |
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Preference number: 3 (lower is better) Translates to: TSTEVWWTQVSC*WQAVTTWLHTH Trigger: GTGGGTGTGCAGCCATGTGGTCACAGCCTGCCAGCAGCAAGACACCTGGGTCCACCACACCTCAGTGGAAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR GCA 72 bp | GCTACTTCCACTGAGGTGTGGTGGACCCAGGTGTCTTaGTGCTGGCAGGCTGTGACCACATGGCTGCACACC | + |
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Preference number: 3 (lower is better) Translates to: ATSTEVWWTQVS*CWQAVTTWLHT Trigger: GGTGTGCAGCCATGTGGTCACAGCCTGCCAGCAGCAAGACACCTGGGTCCACCACACCTCAGTGGAAGTAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR GCA 72 bp | GAAGACCCTGTGGACTGGGAGGGCACCAGGCTCCTCTaGTCAGGACTGGGTCTAGACAAGGCCACGTGTGAT | + |
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Preference number: 3 (lower is better) Translates to: EDPVDWEGTRLL*SGLGLDKATCD Trigger: ATCACACGTGGCCTTGTCTAGACCCAGTCCTGAGCAGAGGAGCCTGGTGCCCTCCCAGTCCACAGGGTCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR CCA 72 bp | GGGTCAGGGAGGCATTCTGCTACTTCCACTGAGGTGTaGTGGACCCAGGTGTCTTGCTGCTGGCAGGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: GSGRHSATSTEV*WTQVSCCWQAV Trigger: CACAGCCTGCCAGCAGCAAGACACCTGGGTCCACCACACCTCAGTGGAAGTAGCAGAATGCCTCCCTGACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR TCA 72 bp | CCTCTGCTCAGGACTGGGTCTAGACAAGGCCACGTGTaGTATGGTGTGCGCCCTGGGCTGTGTGCAAGGGAT | + |
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Preference number: 3 (lower is better) Translates to: PLLRTGSRQGHV*YGVRPGLCARD Trigger: ATCCCTTGCACACAGCCCAGGGCGCACACCATATCACACGTGGCCTTGTCTAGACCCAGTCCTGAGCAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR CCA 72 bp | TCAGGGAGGCATTCTGCTACTTCCACTGAGGTGTGGTaGACCCAGGTGTCTTGCTGCTGGCAGGCTGTGACC | + |
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Preference number: 3 (lower is better) Translates to: SGRHSATSTEVW*TQVSCCWQAVT Trigger: GGTCACAGCCTGCCAGCAGCAAGACACCTGGGTCCACCACACCTCAGTGGAAGTAGCAGAATGCCTCCCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR-3UTR CAA 90 bp | ACTCCAGGCCTGACACTCCCCAGCACAGCCCAGAGCTGGGGACTCTGCACCTGCATACTTGAGGACAATTaGTTATCACACCCCCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: TPGLTLPSTAQSWGLCTCILEDN*LSHPLA Trigger: GGCCAGGGGGTGTGATAACAAATTGTCCTCAAGTAT...GCAGGTGCAGAGTCCCCAGCTCTGGGCTGTGCTGGGGAGTGTCAGGCCTGGAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR GCA 72 bp | TCTGCACGCCCAGATGAGATGCAGACATCTAGTTTGTaGTTCCTTCAACCAGGGCCACAGACTGCCTCGGGG | + |
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Preference number: 3 (lower is better) Translates to: SARPDEMQTSSL*FLQPGPQTASG Trigger: CCCCGAGGCAGTCTGTGGCCCTGGTTGAAGGAAGCACAAACTAGATGTCTGCATCTCATCTGGGCGTGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR TCA 72 bp | GCTGACCTGTGTCGGGGCAAGTGGCTAATTGTCCCTTaGTTGCCATTTGCTGGCAAGCATAGCAGCAAGAGT | + |
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Preference number: 3 (lower is better) Translates to: ADLCRGKWLIVP*LPFAGKHSSKS Trigger: ACTCTTGCTGCTATGCTTGCCAGCAAATGGCAATCAAGGGACAATTAGCCACTTGCCCCGACACAGGTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR TCA 72 bp | TGTGAACAGCTGGACCCTCTGTGTTGTAAGGTAAGCTaGCAAGCGCTAATTGCTCTGGCCTCAAACTACAGC | + |
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Preference number: 3 (lower is better) Translates to: CEQLDPLCCKVS*QALIALASNYS Trigger: GCTGTAGTTTGAGGCCAGAGCAATTAGCGCTTGTCAGCTTACCTTACAACACAGAGGGTCCAGCTGTTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR CCA 72 bp | ATGGGATACTTGAGGACAATTTGTTATCACACCCCCTaGCCATCAGCTAACAATTCACTTCTACTGGTTTTT | + |
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Preference number: 3 (lower is better) Translates to: MGYLRTICYHTP*PSANNSLLLVF Trigger: AAAAACCAGTAGAAGTGAATTGTTAGCTGATGGCCAGGGGGTGTGATAACAAATTGTCCTCAAGTATCCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR GCA 90 bp | CCTGACACTCCCCAGCACAGCCCAGAGCTGGGGACTCTGCACCTGCTTGCCAGACAGCCCACCAAAGGCTaGGGCTGTGGGGATGTACCG | + |
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Preference number: 4 (lower is better) Translates to: PDTPQHSPELGTLHLLARQPTKG*GCGDVP Trigger: CGGTACATCCCCACAGCCGCAGCCTTTGGTGGGCTG...TCTGGCAAGCAGGTGCAGAGTCCCCAGCTCTGGGCTGTGCTGGGGAGTGTCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR CAA 72 bp | CCAGGGCCACAGACTGCCTCGGGGCAGCTGGGACCCTaGCAGCTGCCAGGCACTGAGAAGTGCAAGGGTTTA | + |
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Preference number: 4 (lower is better) Translates to: PGPQTASGQLGP*QLPGTEKCKGL Trigger: TAAACCCTTGCACTTCTCAGTGCCTGGCAGCTGCAAGGGTCCCAGCTGCCCCGAGGCAGTCTGTGGCCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR GCA 90 bp | CCTGACACTCCCCAGCACAGCCCAGAGCTGGGGACTCTGCACCTGCTTGCCAGACAGAGAGGGCCCCAATaGACAGCCCACCAAAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: PDTPQHSPELGTLHLLARQRGPQ*TAHQRL Trigger: CAGCCTTTGGTGGGCTGTGCATTGGGGCCCTCTCTG...TCTGGCAAGCAGGTGCAGAGTCCCCAGCTCTGGGCTGTGCTGGGGAGTGTCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR TCA 90 bp | AGCAGACACGTGGACCCTGCTGATCCTCACCTGTCTGCACGCCCAGATGAGATGGGCTGGGCCCCCAGATaGTGTATCCGACCAGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: SRHVDPADPHLSARPDEMGWAPR*CIRPGA Trigger: GGCACCTGGTCGGATACATCATCTGGGGGCCCAGCC...CATCTCATCTGGGCGTGCAGACAGGTGAGGATCAGCAGGGTCCACGTGTCTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR TCA 90 bp | CCTGACACTCCCCAGCACAGCCCAGAGCTGGGGACTCTGCACCTGCTTGCCAGACACAGGAGCCCAGCATaGACACGATGTACACGACCG | + |
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Preference number: 4 (lower is better) Translates to: PDTPQHSPELGTLHLLARHRSPA*TRCTRP Trigger: CGGTCGTGTACATCGTGTTCATGCTGGGCTCCTGTG...TCTGGCAAGCAGGTGCAGAGTCCCCAGCTCTGGGCTGTGCTGGGGAGTGTCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR GCA 90 bp | AGTGGGAAGACCCTGTGGACTGGGAGGGCACCAGGCTCCTCTGCTCAGGACTGGGTTCTGGCGGTAGAATaGCTCTCGAAGGGCTCGGAC | + |
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Preference number: 4 (lower is better) Translates to: SGKTLWTGRAPGSSAQDWVLAVE*LSKGSD Trigger: GTCCGAGCCCTTCGAGAGGCATTCTACCGCCAGAAC...CCAGTCCTGAGCAGAGGAGCCTGGTGCCCTCCCAGTCCACAGGGTCTTCCCACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR GCA 90 bp | AGTGGGAAGACCCTGTGGACTGGGAGGGCACCAGGCTCCTCTGCTCAGGACTGGAGAGAAGGGCTCCCATaGTGCCCACCTCGCTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: SGKTLWTGRAPGSSAQDWREGLP*CPPRSV Trigger: AACAGAGCGAGGTGGGCAGCATGGGAGCCCTTCTCT...CCAGTCCTGAGCAGAGGAGCCTGGTGCCCTCCCAGTCCACAGGGTCTTCCCACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR CCA 90 bp | CCTGACACTCCCCAGCACAGCCCAGAGCTGGGGACTCTGCACCTGCTTGCCAGAACGCGCCGACTTGATTaGAAGGTCCACTCGGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: PDTPQHSPELGTLHLLARTRRLD*KVHSEA Trigger: GGCTTCCGAGTGGACCTTCCAATCAAGTCGGCGCGT...TCTGGCAAGCAGGTGCAGAGTCCCCAGCTCTGGGCTGTGCTGGGGAGTGTCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR TCA 90 bp | AGCCCCGGGTCAGGGAGGCATTCTGCTACTTCCACTGAGGTGTGGTGGACCCAGGCCACTGAAGCGTGCTaGCAGCATCTGGGAGATGAC | + |
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Preference number: 4 (lower is better) Translates to: SPGSGRHSATSTEVWWTQATEAC*QHLGDD Trigger: GTCATCTCCCAGATGCTGTCAGCACGCTTCAGTGGC...CTGGGTCCACCACACCTCAGTGGAAGTAGCAGAATGCCTCCCTGACCCGGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR GCA 90 bp | CCTGACACTCCCCAGCACAGCCCAGAGCTGGGGACTCTGCACCTGCTTGCCAGACCCCTCATCACCATCTaGTGCTCCTTCAGCTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: PDTPQHSPELGTLHLLARPLITI*CSFSCF Trigger: AAAGCAGCTGAAGGAGCAGCAGATGGTGATGAGGGG...TCTGGCAAGCAGGTGCAGAGTCCCCAGCTCTGGGCTGTGCTGGGGAGTGTCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR TCA 90 bp | CCTGACACTCCCCAGCACAGCCCAGAGCTGGGGACTCTGCACCTGCTTGCCAGACTGAGTCTGAAGACATaGTGCCAAACAGGGGGATCT | + |
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Preference number: 4 (lower is better) Translates to: PDTPQHSPELGTLHLLARLSLKT*CQTGGS Trigger: AGATCCCCCTGTTTGGCATCATGTCTTCAGACTCAG...TCTGGCAAGCAGGTGCAGAGTCCCCAGCTCTGGGCTGTGCTGGGGAGTGTCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR TCA 90 bp | CCTGACACTCCCCAGCACAGCCCAGAGCTGGGGACTCTGCACCTGCTTGCCAGACAAAGAGCTGAATGGTaGTCAGCAGGCAGATTCCAG | + |
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Preference number: 4 (lower is better) Translates to: PDTPQHSPELGTLHLLARQRAEW*SAGRFQ Trigger: CTGGAATCTGCCTGCTGATCACCATTCAGCTCTTTG...TCTGGCAAGCAGGTGCAGAGTCCCCAGCTCTGGGCTGTGCTGGGGAGTGTCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR TCA 90 bp | AGAGCCCCGGGTCAGGGAGGCATTCTGCTACTTCCACTGAGGTGTGGTGGACCCCCAGCAACAAAGAGCTaGATGGTGATCAGCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: RAPGQGGILLLPLRCGGPPATKS*MVISRQ Trigger: CTGCCTGCTGATCACCATTCAGCTCTTTGTTGCTGG...GGGTCCACCACACCTCAGTGGAAGTAGCAGAATGCCTCCCTGACCCGGGGCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR TCA 90 bp | AGCAGACACGTGGACCCTGCTGATCCTCACCTGTCTGCACGCCCAGATGAGATGGGTAACGCGCCGACTTaGTTGGAAGGTCCACTCGGA | + |
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Preference number: 4 (lower is better) Translates to: SRHVDPADPHLSARPDEMGNAPT*LEGPLG Trigger: TCCGAGTGGACCTTCCAATCAAGTCGGCGCGTTACC...CATCTCATCTGGGCGTGCAGACAGGTGAGGATCAGCAGGGTCCACGTGTCTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR TCA 90 bp | AGCCCCGGGTCAGGGAGGCATTCTGCTACTTCCACTGAGGTGTGGTGGACCCAGCCTCGCTCTGTTCCTTaGCGAAGATCTCAAAGTACT | + |
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Preference number: 4 (lower is better) Translates to: SPGSGRHSATSTEVWWTQPRSVP*RRSQST Trigger: AGTACTTTGAGATCTTCGTCAAGGAACAGAGCGAGG...CTGGGTCCACCACACCTCAGTGGAAGTAGCAGAATGCCTCCCTGACCCGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR GCA 90 bp | CTGGGTCTAGACAAGGCCACGTGTGATATGGTGTGCGCCCTGGGCTGTGTGCAAAGTGGTGGGGCTGAATaGCTTCCACACAATGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: LGLDKATCDMVCALGCVQSGGAE*LPHNGL Trigger: GAGACCATTGTGTGGAAGGCATTCAGCCCCACCACT...TTGCACACAGCCCAGGGCGCACACCATATCACACGTGGCCTTGTCTAGACCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR GCA 90 bp | AGTGGGAAGACCCTGTGGACTGGGAGGGCACCAGGCTCCTCTGCTCAGGACTGGTGTTTTGGAGAAGAATaGACAGGAGCCCAGCATGAA | + |
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Preference number: 4 (lower is better) Translates to: SGKTLWTGRAPGSSAQDWCFGEE*TGAQHE Trigger: TTCATGCTGGGCTCCTGTGCATTCTTCTCCAAAACA...CCAGTCCTGAGCAGAGGAGCCTGGTGCCCTCCCAGTCCACAGGGTCTTCCCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| 3UTR CAA 72 bp | CTGTCTGCACGCCCAGATGAGATGCAGACATCTAGTTaGTGCTTCCTTCAACCAGGGCCACAGACTGCCTCG | + |
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Preference number: 4 (lower is better) Translates to: LSARPDEMQTSS*CFLQPGPQTAS Trigger: CGAGGCAGTCTGTGGCCCTGGTTGAAGGAAGCACAAACTAGATGTCTGCATCTCATCTGGGCGTGCAGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR TCA 90 bp | AGTGGGAAGACCCTGTGGACTGGGAGGGCACCAGGCTCCTCTGCTCAGGACTGGACTTTCTCCTTAAACTaGATCTTTCTCTCTGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: SGKTLWTGRAPGSSAQDWTFSLN*IFLSGF Trigger: GAAGCCAGAGAGAAAGATTCAGTTTAAGGAGAAAGT...CCAGTCCTGAGCAGAGGAGCCTGGTGCCCTCCCAGTCCACAGGGTCTTCCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR CCA 90 bp | AAGCTGACAAGCGCTAATTGCTCTGGCCTCAAACTACAGCCTTTGTACCCTTGCCCTTGTCTGTGCGGGTaGCCAGCAGGTGGAATAGCG | + |
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Preference number: 4 (lower is better) Translates to: KLTSANCSGLKLQPLYPCPCLCG*PAGGIA Trigger: CGCTATTCCACCTGCTGGCCACCCGCACAGACAAGG...GCAAGGGTACAAAGGCTGTAGTTTGAGGCCAGAGCAATTAGCGCTTGTCAGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR TCA 90 bp | CTGGGTCTAGACAAGGCCACGTGTGATATGGTGTGCGCCCTGGGCTGTGTGCAATTTCTCTCTGGCTTCTaGATTTCCGGCAAGATGACA | + |
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Preference number: 4 (lower is better) Translates to: LGLDKATCDMVCALGCVQFLSGF*ISGKMT Trigger: TGTCATCTTGCCGGAAATTCAGAAGCCAGAGAGAAA...TTGCACACAGCCCAGGGCGCACACCATATCACACGTGGCCTTGTCTAGACCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR TCA 90 bp | ACATCTAGTTTGTGCTTCCTTCAACCAGGGCCACAGACTGCCTCGGGGCAGCTGAGCCCTGGAAATAGATaGCAACGGCAAAGACGAAGA | + |
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Preference number: 4 (lower is better) Translates to: TSSLCFLQPGPQTASGQLSPGNR*QRQRRR Trigger: TCTTCGTCTTTGCCGTTGTCATCTATTTCCAGGGCT...CAGCTGCCCCGAGGCAGTCTGTGGCCCTGGTTGAAGGAAGCACAAACTAGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR GCA 90 bp | CAAACTACAGCCTTTGTACCCTTGCTGTTAAACCGTTTCTGTCTTAAGAGGGGCCTCGGACCTTGTCTGTaGGGGTGGCCAGCAGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: QTTAFVPLLLNRFCLKRGLGPCL*GWPAGG Trigger: TCCACCTGCTGGCCACCCGCACAGACAAGGTCCGAG...GCCCCTCTTAAGACAGAAACGGTTTAACAGCAAGGGTACAAAGGCTGTAGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR CCA 90 bp | CTGGGTCTAGACAAGGCCACGTGTGATATGGTGTGCGCCCTGGGCTGTGTGCAAATTCCAAACAACTTCTaGGCTCCATTGAAGAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: LGLDKATCDMVCALGCVQIPNNF*APLKRA Trigger: AGCTCTCTTCAATGGAGCCCAGAAGTTGTTTGGAAT...TTGCACACAGCCCAGGGCGCACACCATATCACACGTGGCCTTGTCTAGACCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR CCA 90 bp | CAAACTACAGCCTTTGTACCCTTGCTGTTAAACCGTTTCTGTCTTAAGAGGGGCATGGAGGTCTCCCTGTaGCCCCTCATCACCATCTGC | + |
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Preference number: 4 (lower is better) Translates to: QTTAFVPLLLNRFCLKRGMEVSL*PLITIC Trigger: GCAGATGGTGATGAGGGGCCACAGGGAGACCTCCAT...GCCCCTCTTAAGACAGAAACGGTTTAACAGCAAGGGTACAAAGGCTGTAGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR GCA 90 bp | GGACCCTTGCAGCTGCCAGGCACTGAGAAGTGCAAGGGTTTAAATAAAAATTACTACCGGTTGAGCTCATaGACCATGGAGGTCTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: GPLQLPGTEKCKGLNKNYYRLSS*TMEVSL Trigger: CAGGGAGACCTCCATGGTGCATGAGCTCAACCGGTA...GTAATTTTTATTTAAACCCTTGCACTTCTCAGTGCCTGGCAGCTGCAAGGGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR TCA 90 bp | CAAACTACAGCCTTTGTACCCTTGCTGTTAAACCGTTTCTGTCTTAAGAGGGGCCCAAACAGGGGGATCTaGCAGCATACTAAGAAGATG | + |
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Preference number: 4 (lower is better) Translates to: QTTAFVPLLLNRFCLKRGPNRGI*QHTKKM Trigger: CATCTTCTTAGTATGCTGTCAGATCCCCCTGTTTGG...GCCCCTCTTAAGACAGAAACGGTTTAACAGCAAGGGTACAAAGGCTGTAGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR GCA 90 bp | CAAACTACAGCCTTTGTACCCTTGCTGTTAAACCGTTTCTGTCTTAAGAGGGGCTGCTGCTCCTTCAGCTaGTTTGCAACATCTTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: QTTAFVPLLLNRFCLKRGCCSFS*FATSLA Trigger: TGCCAAAGATGTTGCAAAGCAGCTGAAGGAGCAGCA...GCCCCTCTTAAGACAGAAACGGTTTAACAGCAAGGGTACAAAGGCTGTAGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR GCA 90 bp | GGACCCTTGCAGCTGCCAGGCACTGAGAAGTGCAAGGGTTTAAATAAAAATTACCTCCTTCAGCTGCTTTaGAACATCTTTGGCAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: GPLQLPGTEKCKGLNKNYLLQLL*NIFGRR Trigger: TCTTCTGCCAAAGATGTTGCAAAGCAGCTGAAGGAG...GTAATTTTTATTTAAACCCTTGCACTTCTCAGTGCCTGGCAGCTGCAAGGGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR CCA 90 bp | GGACCCTTGCAGCTGCCAGGCACTGAGAAGTGCAAGGGTTTAAATAAAAATTACGCTTTGCAACATCTTTaGCAGAAGAACCTGAGACTT | + |
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Preference number: 4 (lower is better) Translates to: GPLQLPGTEKCKGLNKNYALQHL*QKNLRL Trigger: AAGTCTCAGGTTCTTCTGCCAAAGATGTTGCAAAGC...GTAATTTTTATTTAAACCCTTGCACTTCTCAGTGCCTGGCAGCTGCAAGGGTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR CAA 90 bp | TTCCTTCAACCAGGGCCACAGACTGCCTCGGGGCAGCTGGGACCCTTGCAGCTGCGAAGGGCTCGGACCTaGTCTGTGCGGGTGGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: FLQPGPQTASGQLGPLQLRRART*SVRVAS Trigger: GCTGGCCACCCGCACAGACAAGGTCCGAGCCCTTCG...CAGCTGCAAGGGTCCCAGCTGCCCCGAGGCAGTCTGTGGCCCTGGTTGAAGGAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS CCA 90 bp | GCCTCTCGAAGGGCTCGGACCTTGTCTGTGCGGGTGGCCAGCAGGTaGAATAGCGCTATGATGGCGCCTTCGAATTCCATCCCTCGGCCA | + |
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Preference number: 5 (lower is better) Translates to: ASRRARTLSVRVASR*NSAMMAPSNSIPRP Trigger: TGGCCGAGGGATGGAATTCGAAGGCGCCATCATAGCGCTATTCCACCTGCTGGCCACCCGCACAGACAAGGTCCGAGCCCTTCGAGAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR CAA 90 bp | AGAGCCCCGGGTCAGGGAGGCATTCTGCTACTTCCACTGAGGTGTGGTGGACCCAGGCTAACCAGCAGGTaGCCACTGAAGCGTGCTGAC | + |
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Preference number: 5 (lower is better) Translates to: RAPGQGGILLLPLRCGGPRLTSR*PLKRAD Trigger: GTCAGCACGCTTCAGTGGCAACCTGCTGGTTAGCCT...GGGTCCACCACACCTCAGTGGAAGTAGCAGAATGCCTCCCTGACCCGGGGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR CAA 90 bp | ACTCCAGGCCTGACACTCCCCAGCACAGCCCAGAGCTGGGGACTCTGCACCTGCTGCTTTGCAACATCTTaGGCAGAAGAACCTGAGACT | + |
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Preference number: 5 (lower is better) Translates to: TPGLTLPSTAQSWGLCTCCFATS*AEEPET Trigger: AGTCTCAGGTTCTTCTGCCAAAGATGTTGCAAAGCA...GCAGGTGCAGAGTCCCCAGCTCTGGGCTGTGCTGGGGAGTGTCAGGCCTGGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR CAA 90 bp | TTCCTTCAACCAGGGCCACAGACTGCCTCGGGGCAGCTGGGACCCTTGCAGCTGACCTCGCTCTGTTCCTaGACGAAGATCTCAAAGTAC | + |
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Preference number: 5 (lower is better) Translates to: FLQPGPQTASGQLGPLQLTSLCS*TKISKY Trigger: GTACTTTGAGATCTTCGTCAAGGAACAGAGCGAGGT...CAGCTGCAAGGGTCCCAGCTGCCCCGAGGCAGTCTGTGGCCCTGGTTGAAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR CAA 90 bp | CTGGGTCTAGACAAGGCCACGTGTGATATGGTGTGCGCCCTGGGCTGTGTGCAAGAGATGACATACAGGTaGGACACCAGAGCAGACTGC | + |
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Preference number: 5 (lower is better) Translates to: LGLDKATCDMVCALGCVQEMTYR*DTRADC Trigger: GCAGTCTGCTCTGGTGTCCAACCTGTATGTCATCTC...TTGCACACAGCCCAGGGCGCACACCATATCACACGTGGCCTTGTCTAGACCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR CAA 90 bp | ACATCTAGTTTGTGCTTCCTTCAACCAGGGCCACAGACTGCCTCGGGGCAGCTGGCTCCTTCAGCTGCTTaGCAACATCTTTGGCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: TSSLCFLQPGPQTASGQLAPSAA*QHLWQK Trigger: CTTCTGCCAAAGATGTTGCAAAGCAGCTGAAGGAGC...CAGCTGCCCCGAGGCAGTCTGTGGCCCTGGTTGAAGGAAGCACAAACTAGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR CAA 90 bp | CTGGGTCTAGACAAGGCCACGTGTGATATGGTGTGCGCCCTGGGCTGTGTGCAACAAGCCGTACCCTTTTaGCAGAAGTTCATCCAAAAG | + |
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Preference number: 5 (lower is better) Translates to: LGLDKATCDMVCALGCVQQAVPF*QKFIQK Trigger: CTTTTGGATGAACTTCTGCAAAAAGGGTACGGCTTG...TTGCACACAGCCCAGGGCGCACACCATATCACACGTGGCCTTGTCTAGACCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS-3UTR CAA 90 bp | GGACCCTTGCAGCTGCCAGGCACTGAGAAGTGCAAGGGTTTAAATAAAAATTACATCCCTCGGCCAGTGTaGACAGTGGTGGGGCTGAAT | + |
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Preference number: 5 (lower is better) Translates to: GPLQLPGTEKCKGLNKNYIPRPV*TVVGLN Trigger: ATTCAGCCCCACCACTGTCAACACTGGCCGAGGGAT...GTAATTTTTATTTAAACCCTTGCACTTCTCAGTGCCTGGCAGCTGCAAGGGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS CCA 72 bp | AGGGCTCGGACCTTGTCTGTGCGGGTGGCCAGCAGGTaGAATAGCGCTATGATGGCGCCTTCGAATTCCATC | + |
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Preference number: 6 (lower is better) Translates to: RARTLSVRVASR*NSAMMAPSNSI Trigger: GATGGAATTCGAAGGCGCCATCATAGCGCTATTCCACCTGCTGGCCACCCGCACAGACAAGGTCCGAGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS CCA 72 bp | CAGGAGCCCAGCATGAACACGATGTACACGACCGCATaGACAGGGTCCTCCAGCACTGAGCCGAACGATTCC | + |
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Preference number: 6 (lower is better) Translates to: QEPSMNTMYTTA*TGSSSTEPNDS Trigger: GGAATCGTTCGGCTCAGTGCTGGAGGACCCTGTCCATGCGGTCGTGTACATCGTGTTCATGCTGGGCTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS TCA 72 bp | GATGTACACGACCGCATGGACAGGGTCCTCCAGCACTaGGCCGAACGATTCCGGAGGAGACAGGTAGTAACA | + |
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Preference number: 6 (lower is better) Translates to: DVHDRMDRVLQH*AERFRRRQVVT Trigger: TGTTACTACCTGTCTCCTCCGGAATCGTTCGGCTCAGTGCTGGAGGACCCTGTCCATGCGGTCGTGTACATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS CAA 72 bp | ATGATGGCGCCTTCGAATTCCATCCCTCGGCCAGTGTaGACAGTGGTGGGGCTGAATGCCTTCCACACAATG | + |
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Preference number: 6 (lower is better) Translates to: MMAPSNSIPRPV*TVVGLNAFHTM Trigger: CATTGTGTGGAAGGCATTCAGCCCCACCACTGTCAACACTGGCCGAGGGATGGAATTCGAAGGCGCCATCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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| CDS TCA 72 bp | CAACGGCAAAGACGAAGATGGTGGCAATCAGGTTCATaGGGTTGGGGAGGTTCTGGCGGTAGAATGCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: QRQRRRWWQSGS*GWGGSGGRMPL Trigger: GAGAGGCATTCTACCGCCAGAACCTCCCCAACCTCATGAACCTGATTGCCACCATCTTCGTCTTTGCCGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032168.7 |
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