Pregenerated sensors for SEC24D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039234Ensembl transcript IDs: ENSMUST00000047923.12, ENSMUST00000200333.2
Found 170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CAAATTGTGTCAGCTTTAGAAATTAGAAGCTGGACAGCCAGTAATGGACTCTTCGTCTCCTCAGGAATGTaGCCTCAGAGGGAGAGCCGA | + |
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Preference number: 2 (lower is better) Translates to: QIVSALEIRSWTASNGLFVSSGM*PQRESR Trigger: TCGGCTCTCCCTCTGAGGTCACATTCCTGAGGAGAC...GAAGAGTCCATTACTGGCTGTCCAGCTTCTAATTTCTAAAGCTGACACAATTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| 3UTR-3UTR CAA 90 bp | TACCCCCACACCTCCACGGGCTTGCCACCTGAGCACTCCGAGCTGAAGGTCTGTAAATTAGGCACCAAGTaGGAGACTGTCTCCTCAGGA | + |
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Preference number: 3 (lower is better) Translates to: YPHTSTGLPPEHSELKVCKLGTK*ETVSSG Trigger: TCCTGAGGAGACAGTCTCCAACTTGGTGCCTAATTT...ACAGACCTTCAGCTCGGAGTGCTCAGGTGGCAAGCCCGTGGAGGTGTGGGGGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| 3UTR CCA 72 bp | GAAATGCAAATTGTGTCAGCTTTAGAAATTAGAAGCTaGACAGCCAGTAATGGACTCTTCCCTTTACAGTAC | + |
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Preference number: 3 (lower is better) Translates to: EMQIVSALEIRS*TASNGLFPLQY Trigger: GTACTGTAAAGGGAAGAGTCCATTACTGGCTGTCCAGCTTCTAATTTCTAAAGCTGACACAATTTGCATTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | TACCCCCACACCTCCACGGGCTTGCCACCTGAGCACTCCGAGCTGAAGGTCTGTGGCCGTTCAGGGCAGTaGGGGGTGGCGGCGGAACCT | + |
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Preference number: 4 (lower is better) Translates to: YPHTSTGLPPEHSELKVCGRSGQ*GVAAEP Trigger: AGGTTCCGCCGCCACCCCCCACTGCCCTGAACGGCC...ACAGACCTTCAGCTCGGAGTGCTCAGGTGGCAAGCCCGTGGAGGTGTGGGGGTA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR GCA 90 bp | TACCCCCACACCTCCACGGGCTTGCCACCTGAGCACTCCGAGCTGAAGGTCTGTCCCCGGGCACTCTGCTaGCTTCAGGGCCTCCATGCC | + |
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Preference number: 4 (lower is better) Translates to: YPHTSTGLPPEHSELKVCPRALC*LQGLHA Trigger: GGCATGGAGGCCCTGAAGGCAGCAGAGTGCCCGGGG...ACAGACCTTCAGCTCGGAGTGCTCAGGTGGCAAGCCCGTGGAGGTGTGGGGGTA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR TCA 90 bp | TACCCCCACACCTCCACGGGCTTGCCACCTGAGCACTCCGAGCTGAAGGTCTGTGACTGCCCAGCTGGGTaGCAGAGGAAGTGGACCCAG | + |
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Preference number: 4 (lower is better) Translates to: YPHTSTGLPPEHSELKVCDCPAG*QRKWTQ Trigger: CTGGGTCCACTTCCTCTGTCACCCAGCTGGGCAGTC...ACAGACCTTCAGCTCGGAGTGCTCAGGTGGCAAGCCCGTGGAGGTGTGGGGGTA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | TACCCCCACACCTCCACGGGCTTGCCACCTGAGCACTCCGAGCTGAAGGTCTGTGGCGTTCAGAGGAGCTaGCCCAGGAAGGCCATCTTG | + |
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Preference number: 4 (lower is better) Translates to: YPHTSTGLPPEHSELKVCGVQRS*PRKAIL Trigger: CAAGATGGCCTTCCTGGGCCAGCTCCTCTGAACGCC...ACAGACCTTCAGCTCGGAGTGCTCAGGTGGCAAGCCCGTGGAGGTGTGGGGGTA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR TCA 90 bp | TACCCCCACACCTCCACGGGCTTGCCACCTGAGCACTCCGAGCTGAAGGTCTGTGTCACCACCATCATCTaGGGCTGGGCCAGATTACTC | + |
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Preference number: 4 (lower is better) Translates to: YPHTSTGLPPEHSELKVCVTTII*GWARLL Trigger: GAGTAATCTGGCCCAGCCTCAGATGATGGTGGTGAC...ACAGACCTTCAGCTCGGAGTGCTCAGGTGGCAAGCCCGTGGAGGTGTGGGGGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| 3UTR CAA 72 bp | CTCTTCCCTTTACAGTACCCCCACACCTCCACGGGCTaGCCACCTGAGCACTCCGAGCTGAAGGTCTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: LFPLQYPHTSTG*PPEHSELKVCV Trigger: CACACAGACCTTCAGCTCGGAGTGCTCAGGTGGCAAGCCCGTGGAGGTGTGGGGGTACTGTAAAGGGAAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR TCA 90 bp | CAGAAAATTAGGCACCAAGTTGGAGACTGTCTCCTCAGGAATGTGACCTCAGAGCTGGAAGGCGCCTGCTaGCTGGGGGCCAGGCGGACC | + |
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Preference number: 4 (lower is better) Translates to: QKIRHQVGDCLLRNVTSELEGAC*LGARRT Trigger: GGTCCGCCTGGCCCCCAGTCAGCAGGCGCCTTCCAG...CTCTGAGGTCACATTCCTGAGGAGACAGTCTCCAACTTGGTGCCTAATTTTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR GCA 90 bp | TACCCCCACACCTCCACGGGCTTGCCACCTGAGCACTCCGAGCTGAAGGTCTGTCAGTATAAGCTGGCTTaGTGCAGACGGACTCGCACA | + |
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Preference number: 4 (lower is better) Translates to: YPHTSTGLPPEHSELKVCQYKLA*CRRTRT Trigger: TGTGCGAGTCCGTCTGCAGCAAGCCAGCTTATACTG...ACAGACCTTCAGCTCGGAGTGCTCAGGTGGCAAGCCCGTGGAGGTGTGGGGGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | CAGAAAATTAGGCACCAAGTTGGAGACTGTCTCCTCAGGAATGTGACCTCAGAGGCCGGCCCAGCCATCTaGGCAGGACCTCCAGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: QKIRHQVGDCLLRNVTSEAGPAI*AGPPGN Trigger: GTTCCCTGGAGGTCCTGCCCAGATGGCTGGGCCGGC...CTCTGAGGTCACATTCCTGAGGAGACAGTCTCCAACTTGGTGCCTAATTTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | TACCCCCACACCTCCACGGGCTTGCCACCTGAGCACTCCGAGCTGAAGGTCTGTCATCCACAAACTGACTaGGGAAGAGGAACAGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: YPHTSTGLPPEHSELKVCHPQTD*GRGTES Trigger: TGACTCTGTTCCTCTTCCCCAGTCAGTTTGTGGATG...ACAGACCTTCAGCTCGGAGTGCTCAGGTGGCAAGCCCGTGGAGGTGTGGGGGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR TCA 90 bp | TACCCCCACACCTCCACGGGCTTGCCACCTGAGCACTCCGAGCTGAAGGTCTGTACATTAAATATTCCCTaGATCAGCTCTGGTGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: YPHTSTGLPPEHSELKVCTLNIP*ISSGGL Trigger: CAGCCCACCAGAGCTGATTCAGGGAATATTTAATGT...ACAGACCTTCAGCTCGGAGTGCTCAGGTGGCAAGCCCGTGGAGGTGTGGGGGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR TCA 90 bp | GCTGAAGGTCTGTGTGCTGTCCAGGCAAGCTGTCCTGAAAGTGATCAAGAAATTAGGGCCTGGGTAAGATaGCTGTGGCAGGGTCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: AEGLCAVQASCPESDQEIRAWVR*LWQGLA Trigger: GGCCAGACCCTGCCACAGTCATCTTACCCAGGCCCT...AATTTCTTGATCACTTTCAGGACAGCTTGCCTGGACAGCACACAGACCTTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR TCA 90 bp | CAGAAAATTAGGCACCAAGTTGGAGACTGTCTCCTCAGGAATGTGACCTCAGAGGGTGGAGGTGGGGGCTaGTACTGGGCGTTCAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: QKIRHQVGDCLLRNVTSEGGGGG*YWAFRG Trigger: TCCTCTGAACGCCCAGTATCAGCCCCCACCTCCACC...CTCTGAGGTCACATTCCTGAGGAGACAGTCTCCAACTTGGTGCCTAATTTTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | CAGAAAATTAGGCACCAAGTTGGAGACTGTCTCCTCAGGAATGTGACCTCAGAGCTGGCCTGGTGGAGGTaGGGGCTGATACTGGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: QKIRHQVGDCLLRNVTSELAWWR*GLILGV Trigger: AACGCCCAGTATCAGCCCCCACCTCCACCAGGCCAG...CTCTGAGGTCACATTCCTGAGGAGACAGTCTCCAACTTGGTGCCTAATTTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | CAGAAAATTAGGCACCAAGTTGGAGACTGTCTCCTCAGGAATGTGACCTCAGAGCAGGGTCTGGCCTGGTaGAGGTGGGGGCTGATACTG | + |
|
Preference number: 4 (lower is better) Translates to: QKIRHQVGDCLLRNVTSEQGLAW*RWGLIL Trigger: CAGTATCAGCCCCCACCTCCACCAGGCCAGACCCTG...CTCTGAGGTCACATTCCTGAGGAGACAGTCTCCAACTTGGTGCCTAATTTTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | CAGAAAATTAGGCACCAAGTTGGAGACTGTCTCCTCAGGAATGTGACCTCAGAGGGATCCAGCTTCCTCTaGAGCTGTGGTGCCGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: QKIRHQVGDCLLRNVTSEGSSFL*SCGAGP Trigger: TGGGCCGGCACCACAGCTCCAGAGGAAGCTGGATCC...CTCTGAGGTCACATTCCTGAGGAGACAGTCTCCAACTTGGTGCCTAATTTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | TACCCCCACACCTCCACGGGCTTGCCACCTGAGCACTCCGAGCTGAAGGTCTGTACAGCTGTTTGGGGCTaGAAAAGTATCTTCTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: YPHTSTGLPPEHSELKVCTAVWG*KSIFSL Trigger: CAAAGAGAAGATACTTTTCCAGCCCCAAACAGCTGT...ACAGACCTTCAGCTCGGAGTGCTCAGGTGGCAAGCCCGTGGAGGTGTGGGGGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | TACCCCCACACCTCCACGGGCTTGCCACCTGAGCACTCCGAGCTGAAGGTCTGTTCGGTCAGAAACCTTTaGCTATCTGAATGTATCTGG | + |
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Preference number: 4 (lower is better) Translates to: YPHTSTGLPPEHSELKVCSVRNL*LSECIW Trigger: CCAGATACATTCAGATAGCCAAAGGTTTCTGACCGA...ACAGACCTTCAGCTCGGAGTGCTCAGGTGGCAAGCCCGTGGAGGTGTGGGGGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR TCA 90 bp | TACCCCCACACCTCCACGGGCTTGCCACCTGAGCACTCCGAGCTGAAGGTCTGTCTGTGGTGTTGTTCATaGATATTCCACCAAAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: YPHTSTGLPPEHSELKVCLWCCS*IFHQRN Trigger: ATTTCTTTGGTGGAATATTCATGAACAACACCACAG...ACAGACCTTCAGCTCGGAGTGCTCAGGTGGCAAGCCCGTGGAGGTGTGGGGGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR GCA 90 bp | CAAATTGTGTCAGCTTTAGAAATTAGAAGCTGGACAGCCAGTAATGGACTCTTCCCTCTGGAGCTGTGGTaGCGGCCCAGCCATCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: QIVSALEIRSWTASNGLFPLELW*RPSHLG Trigger: GCCCAGATGGCTGGGCCGGCACCACAGCTCCAGAGG...GAAGAGTCCATTACTGGCTGTCCAGCTTCTAATTTCTAAAGCTGACACAATTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | GCTGAAGGTCTGTGTGCTGTCCAGGCAAGCTGTCCTGAAAGTGATCAAGAAATTGGATGGCCTGGAGTATaGGCTCCATTGGGGCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: AEGLCAVQASCPESDQEIGWPGV*APLGPN Trigger: GTTTGGCCCCAATGGAGCCCATACTCCAGGCCATCC...AATTTCTTGATCACTTTCAGGACAGCTTGCCTGGACAGCACACAGACCTTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | GCTGAAGGTCTGTGTGCTGTCCAGGCAAGCTGTCCTGAAAGTGATCAAGAAATTGATGACGGCAGCCAGTaGGATCTGAGCTTGCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: AEGLCAVQASCPESDQEIDDGSQ*DLSLLG Trigger: GCCAAGCAAGCTCAGATCCCACTGGCTGCCGTCATC...AATTTCTTGATCACTTTCAGGACAGCTTGCCTGGACAGCACACAGACCTTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR TCA 90 bp | CAGAAAATTAGGCACCAAGTTGGAGACTGTCTCCTCAGGAATGTGACCTCAGAGGAGGAACAGAGTCACTaGGCAGCTGTTGGCCACACA | + |
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Preference number: 4 (lower is better) Translates to: QKIRHQVGDCLLRNVTSEEEQSH*AAVGHT Trigger: TGTGTGGCCAACAGCTGCTCAGTGACTCTGTTCCTC...CTCTGAGGTCACATTCCTGAGGAGACAGTCTCCAACTTGGTGCCTAATTTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR TCA 90 bp | GCTGAAGGTCTGTGTGCTGTCCAGGCAAGCTGTCCTGAAAGTGATCAAGAAATTAAAGAGTTCCTCCCGTaGGCAGAGGAACCAGACCCA | + |
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Preference number: 4 (lower is better) Translates to: AEGLCAVQASCPESDQEIKEFLP*AEEPDP Trigger: TGGGTCTGGTTCCTCTGCTCACGGGAGGAACTCTTT...AATTTCTTGATCACTTTCAGGACAGCTTGCCTGGACAGCACACAGACCTTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR TCA 90 bp | GTCTGTGTGCTGTCCAGGCAAGCTGTCCTGAAAGTGATCAAGAAATTAAAACTACCACGCCCATGGTCATaGCCAGCTGCCGCTGGTAAG | + |
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Preference number: 4 (lower is better) Translates to: VCVLSRQAVLKVIKKLKLPRPWS*PAAAGK Trigger: CTTACCAGCGGCAGCTGGTCATGACCATGGGCGTGG...TAGTTTTAATTTCTTGATCACTTTCAGGACAGCTTGCCTGGACAGCACACAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR GCA 90 bp | GCTGAAGGTCTGTGTGCTGTCCAGGCAAGCTGTCCTGAAAGTGATCAAGAAATTCAGAATAGATGGCTGTaGAGGTTGTGGAGGCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: AEGLCAVQASCPESDQEIQNRWL*RLWRPL Trigger: CAGGGGCCTCCACAACCTGCACAGCCATCTATTCTG...AATTTCTTGATCACTTTCAGGACAGCTTGCCTGGACAGCACACAGACCTTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR GCA 90 bp | GTCTGTGTGCTGTCCAGGCAAGCTGTCCTGAAAGTGATCAAGAAATTAAAACTACTTCCCCGGGCACTCTaGTGCCTTCAGGGCCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: VCVLSRQAVLKVIKKLKLLPRAL*CLQGLH Trigger: ATGGAGGCCCTGAAGGCAGCAGAGTGCCCGGGGAAG...TAGTTTTAATTTCTTGATCACTTTCAGGACAGCTTGCCTGGACAGCACACAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | CAGAAAATTAGGCACCAAGTTGGAGACTGTCTCCTCAGGAATGTGACCTCAGAGTGGCTTCATCACGCCTaGTGGAGAGGATGCATGGGA | + |
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Preference number: 4 (lower is better) Translates to: QKIRHQVGDCLLRNVTSEWLHHA*WRGCMG Trigger: TCCCATGCATCCTCTCCACCAGGCGTGATGAAGCCA...CTCTGAGGTCACATTCCTGAGGAGACAGTCTCCAACTTGGTGCCTAATTTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | CAAATTGTGTCAGCTTTAGAAATTAGAAGCTGGACAGCCAGTAATGGACTCTTCTGGCTGTGCAGGTTGTaGAGGCCCCTGGAAGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: QIVSALEIRSWTASNGLFWLCRL*RPLEGA Trigger: GGCGCCTTCCAGGGGCCTCCACAACCTGCACAGCCA...GAAGAGTCCATTACTGGCTGTCCAGCTTCTAATTTCTAAAGCTGACACAATTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | GTCTGTGTGCTGTCCAGGCAAGCTGTCCTGAAAGTGATCAAGAAATTAAAACTACTCGGTGGTGACCAGTaGAGGTACCTGGCCCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: VCVLSRQAVLKVIKKLKLLGGDQ*RYLAPG Trigger: ACCAGGGGCCAGGTACCTCCACTGGTCACCACCGAG...TAGTTTTAATTTCTTGATCACTTTCAGGACAGCTTGCCTGGACAGCACACAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | TACCCCCACACCTCCACGGGCTTGCCACCTGAGCACTCCGAGCTGAAGGTCTGTTTCACGTTAAAGAAGTaGAGAACTTTGTTGTATGTG | + |
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Preference number: 4 (lower is better) Translates to: YPHTSTGLPPEHSELKVCFTLKK*RTLLYV Trigger: CACATACAACAAAGTTCTCCACTTCTTTAACGTGAA...ACAGACCTTCAGCTCGGAGTGCTCAGGTGGCAAGCCCGTGGAGGTGTGGGGGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | CAAATTGTGTCAGCTTTAGAAATTAGAAGCTGGACAGCCAGTAATGGACTCTTCGCAGCGGACGGCTGGTaGCAGCGCTGCACTCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: QIVSALEIRSWTASNGLFAADGW*QRCTLH Trigger: GTGAAGAGTGCAGCGCTGCCACCAGCCGTCCGCTGC...GAAGAGTCCATTACTGGCTGTCCAGCTTCTAATTTCTAAAGCTGACACAATTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | TTAATTCATCTTACAACTCTCAGGTCAGACCTCACCATTGAGGGAATTCAGGGCGGAGGCAGGAACTGGTaGAGAGGATGCATGGGACGG | + |
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Preference number: 4 (lower is better) Translates to: LIHLTTLRSDLTIEGIQGGGRNW*RGCMGR Trigger: CCGTCCCATGCATCCTCTCCACCAGTTCCTGCCTCC...GCCCTGAATTCCCTCAATGGTGAGGTCTGACCTGAGAGTTGTAAGATGAATTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200333.2 |
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| CDS-3UTR TCA 90 bp | GCTGAAGGTCTGTGTGCTGTCCAGGCAAGCTGTCCTGAAAGTGATCAAGAAATTGGTCCTGGAAATCTTTaGGGAGGATGGCCTGGAGTA | + |
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Preference number: 4 (lower is better) Translates to: AEGLCAVQASCPESDQEIGPGNL*GGWPGV Trigger: TACTCCAGGCCATCCTCCTCAAAGATTTCCAGGACC...AATTTCTTGATCACTTTCAGGACAGCTTGCCTGGACAGCACACAGACCTTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR TCA 90 bp | CAAATTGTGTCAGCTTTAGAAATTAGAAGCTGGACAGCCAGTAATGGACTCTTCTGGCAGGGTCTGGCCTaGCGCATAAGAGGGTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: QIVSALEIRSWTASNGLFWQGLA*RIRGCH Trigger: GTGGCACCCTCTTATGCGTCAGGCCAGACCCTGCCA...GAAGAGTCCATTACTGGCTGTCCAGCTTCTAATTTCTAAAGCTGACACAATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR TCA 90 bp | GCTGAAGGTCTGTGTGCTGTCCAGGCAAGCTGTCCTGAAAGTGATCAAGAAATTGCTTGTCATCGTGCTTaGACTCCACTGTCACGGCTT | + |
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Preference number: 4 (lower is better) Translates to: AEGLCAVQASCPESDQEIACHRA*TPLSRL Trigger: AAGCCGTGACAGTGGAGTTCAAGCACGATGACAAGC...AATTTCTTGATCACTTTCAGGACAGCTTGCCTGGACAGCACACAGACCTTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | CAGAAAATTAGGCACCAAGTTGGAGACTGTCTCCTCAGGAATGTGACCTCAGAGGACAGGTGGGGGTCCTaGAAATCTTTGAGGAGGATG | + |
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Preference number: 4 (lower is better) Translates to: QKIRHQVGDCLLRNVTSEDRWGS*KSLRRM Trigger: CATCCTCCTCAAAGATTTCCAGGACCCCCACCTGTC...CTCTGAGGTCACATTCCTGAGGAGACAGTCTCCAACTTGGTGCCTAATTTTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | CAGAAAATTAGGCACCAAGTTGGAGACTGTCTCCTCAGGAATGTGACCTCAGAGTTGCCTGTGAGTTGGTaGAGACATAGGAGAGGCACC | + |
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Preference number: 4 (lower is better) Translates to: QKIRHQVGDCLLRNVTSELPVSW*RHRRGT Trigger: GGTGCCTCTCCTATGTCTCCACCAACTCACAGGCAA...CTCTGAGGTCACATTCCTGAGGAGACAGTCTCCAACTTGGTGCCTAATTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | GCTGAAGGTCTGTGTGCTGTCCAGGCAAGCTGTCCTGAAAGTGATCAAGAAATTCTTGTCCACCTCTGGTaGCCCTGTCATTCTCGATCA | + |
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Preference number: 4 (lower is better) Translates to: AEGLCAVQASCPESDQEILVHLW*PCHSRS Trigger: TGATCGAGAATGACAGGGCCACCAGAGGTGGACAAG...AATTTCTTGATCACTTTCAGGACAGCTTGCCTGGACAGCACACAGACCTTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | CAGAAAATTAGGCACCAAGTTGGAGACTGTCTCCTCAGGAATGTGACCTCAGAGTCCCAGCGACAGCTCTaGCTTCTCATAGTGGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: QKIRHQVGDCLLRNVTSESQRQL*LLIVVQ Trigger: TTGGACCACTATGAGAAGCCAGAGCTGTCGCTGGGA...CTCTGAGGTCACATTCCTGAGGAGACAGTCTCCAACTTGGTGCCTAATTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | GCTGAAGGTCTGTGTGCTGTCCAGGCAAGCTGTCCTGAAAGTGATCAAGAAATTTCACTGAGCAGCTGTTaGCCACACAGTCTTTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: AEGLCAVQASCPESDQEISLSSC*PHSLWP Trigger: TGGCCAAAGACTGTGTGGCCAACAGCTGCTCAGTGA...AATTTCTTGATCACTTTCAGGACAGCTTGCCTGGACAGCACACAGACCTTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | CAGAAAATTAGGCACCAAGTTGGAGACTGTCTCCTCAGGAATGTGACCTCAGAGGAGTTGTTGAGAGTGTaGACTTCCCACCTCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: QKIRHQVGDCLLRNVTSEELLRV*TSHLRQ Trigger: CTGCCTGAGGTGGGAAGTCCACACTCTCAACAACTC...CTCTGAGGTCACATTCCTGAGGAGACAGTCTCCAACTTGGTGCCTAATTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR TCA 90 bp | CAAATTGTGTCAGCTTTAGAAATTAGAAGCTGGACAGCCAGTAATGGACTCTTCGGTGGCGGCGGAACCTaGTGTCCTGGCTGCAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: QIVSALEIRSWTASNGLFGGGGT*CPGCRI Trigger: TATTCTGCAGCCAGGACATCAGGTTCCGCCGCCACC...GAAGAGTCCATTACTGGCTGTCCAGCTTCTAATTTCTAAAGCTGACACAATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS-3UTR GCA 90 bp | CAGAAAATTAGGCACCAAGTTGGAGACTGTCTCCTCAGGAATGTGACCTCAGAGCTGAGCTTGTCATCGTaGTTGAACTCCACTGTCACG | + |
|
Preference number: 4 (lower is better) Translates to: QKIRHQVGDCLLRNVTSELSLSS*LNSTVT Trigger: CGTGACAGTGGAGTTCAAGCACGATGACAAGCTCAG...CTCTGAGGTCACATTCCTGAGGAGACAGTCTCCAACTTGGTGCCTAATTTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | CAGAAAATTAGGCACCAAGTTGGAGACTGTCTCCTCAGGAATGTGACCTCAGAGGATTGGCAGGAGCAGTaGATAGAAGAAGAGCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QKIRHQVGDCLLRNVTSEDWQEQ*IEEELG Trigger: TCCCAGCTCTTCTTCTATCCACTGCTCCTGCCAATC...CTCTGAGGTCACATTCCTGAGGAGACAGTCTCCAACTTGGTGCCTAATTTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS-3UTR TCA 90 bp | CAAATTGTGTCAGCTTTAGAAATTAGAAGCTGGACAGCCAGTAATGGACTCTTCTGCATGGAGCTGAACTaGCTGCCCAGCTGGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: QIVSALEIRSWTASNGLFCMELN*LPSWVT Trigger: TGTCACCCAGCTGGGCAGTCAGTTCAGCTCCATGCA...GAAGAGTCCATTACTGGCTGTCCAGCTTCTAATTTCTAAAGCTGACACAATTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | GCTGAAGGTCTGTGTGCTGTCCAGGCAAGCTGTCCTGAAAGTGATCAAGAAATTCACACTATTGACAGGTaGGGGTCCTGGAAATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AEGLCAVQASCPESDQEIHTIDR*GSWKSL Trigger: CAAAGATTTCCAGGACCCCCACCTGTCAATAGTGTG...AATTTCTTGATCACTTTCAGGACAGCTTGCCTGGACAGCACACAGACCTTCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | CAAATTGTGTCAGCTTTAGAAATTAGAAGCTGGACAGCCAGTAATGGACTCTTCGTTGGTTGCTTGCTGTaGAGGGTAGCCAGGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QIVSALEIRSWTASNGLFVGCLL*RVARTQ Trigger: CTGGGTCCTGGCTACCCTCCACAGCAAGCAACCAAC...GAAGAGTCCATTACTGGCTGTCCAGCTTCTAATTTCTAAAGCTGACACAATTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | CAAATTGTGTCAGCTTTAGAAATTAGAAGCTGGACAGCCAGTAATGGACTCTTCACAAGGGGGTCTCGTTaGGCGGAATGTCAGCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QIVSALEIRSWTASNGLFTRGSR*AECQRR Trigger: CCTTCGCTGACATTCCGCCCAACGAGACCCCCTTGT...GAAGAGTCCATTACTGGCTGTCCAGCTTCTAATTTCTAAAGCTGACACAATTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR TCA 90 bp | CAAATTGTGTCAGCTTTAGAAATTAGAAGCTGGACAGCCAGTAATGGACTCTTCGAGTGGCCTTGGTCTTaGATCACACACTCGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QIVSALEIRSWTASNGLFEWPWS*ITHSVV Trigger: CACCACCGAGTGTGTGATTCAAGACCAAGGCCACTC...GAAGAGTCCATTACTGGCTGTCCAGCTTCTAATTTCTAAAGCTGACACAATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR GCA 90 bp | GTCTGTGTGCTGTCCAGGCAAGCTGTCCTGAAAGTGATCAAGAAATTAAAACTAGGCACATGTAGGCTTTaGACCTGTTGCACCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: VCVLSRQAVLKVIKKLKLGTCRL*TCCTSL Trigger: CAGTGAGGTGCAACAGGTGCAAAGCCTACATGTGCC...TAGTTTTAATTTCTTGATCACTTTCAGGACAGCTTGCCTGGACAGCACACAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS-3UTR GCA 90 bp | CAAATTGTGTCAGCTTTAGAAATTAGAAGCTGGACAGCCAGTAATGGACTCTTCCTTGAGCTTCCCCGGTaGTTCGGCAGTAGGCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QIVSALEIRSWTASNGLFLELPR*FGSRQR Trigger: TCTTTGCCTACTGCCGAAGCACCGGGGAAGCTCAAG...GAAGAGTCCATTACTGGCTGTCCAGCTTCTAATTTCTAAAGCTGACACAATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS-3UTR TCA 90 bp | CAAATTGTGTCAGCTTTAGAAATTAGAAGCTGGACAGCCAGTAATGGACTCTTCAAGAGGAATGGAAGATaGAGAGCTTCCCCGGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: QIVSALEIRSWTASNGLFKRNGR*RASPGT Trigger: AGTGCCCGGGGAAGCTCTTCATCTTCCATTCCTCTT...GAAGAGTCCATTACTGGCTGTCCAGCTTCTAATTTCTAAAGCTGACACAATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS-3UTR TCA 90 bp | CAAATTGTGTCAGCTTTAGAAATTAGAAGCTGGACAGCCAGTAATGGACTCTTCAGAAATCAGTGGCCCTaGAACCTGTGCTGGTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: QIVSALEIRSWTASNGLFRNQWP*NLCWSE Trigger: TTCGGACCAGCACAGGTTTCAGGGCCACTGATTTCT...GAAGAGTCCATTACTGGCTGTCCAGCTTCTAATTTCTAAAGCTGACACAATTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS-3UTR GCA 90 bp | CAAATTGTGTCAGCTTTAGAAATTAGAAGCTGGACAGCCAGTAATGGACTCTTCAGGCTTTGCACCTGTTaGACCTCACTGGTCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: QIVSALEIRSWTASNGLFRLCTC*TSLVHS Trigger: AGAGTGGACCAGTGAGGTGCAACAGGTGCAAAGCCT...GAAGAGTCCATTACTGGCTGTCCAGCTTCTAATTTCTAAAGCTGACACAATTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS-3UTR GCA 90 bp | CAAATTGTGTCAGCTTTAGAAATTAGAAGCTGGACAGCCAGTAATGGACTCTTCTATAAGCTGGCTTGCTaGAGACGGACTCGCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QIVSALEIRSWTASNGLFYKLAC*RRTRTV Trigger: CACTGTGCGAGTCCGTCTGCAGCAAGCCAGCTTATA...GAAGAGTCCATTACTGGCTGTCCAGCTTCTAATTTCTAAAGCTGACACAATTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS-3UTR CCA 90 bp | CAAATTGTGTCAGCTTTAGAAATTAGAAGCTGGACAGCCAGTAATGGACTCTTCTACAGATCCGCTAGCTaGGTGCTGCAGTTTAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: QIVSALEIRSWTASNGLFYRSAS*VLQFKA Trigger: CGCCTTAAACTGCAGCACCCAGCTAGCGGATCTGTA...GAAGAGTCCATTACTGGCTGTCCAGCTTCTAATTTCTAAAGCTGACACAATTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR TCA 90 bp | GTCTGTGTGCTGTCCAGGCAAGCTGTCCTGAAAGTGATCAAGAAATTAAAACTATATGGGCAGTCTGATTaGCTAGAATTTCCCGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: VCVLSRQAVLKVIKKLKLYGQSD*LEFPGW Trigger: CCATCCGGGAAATTCTAGTCAATCAGACTGCCCATA...TAGTTTTAATTTCTTGATCACTTTCAGGACAGCTTGCCTGGACAGCACACAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR TCA 90 bp | GTCTGTGTGCTGTCCAGGCAAGCTGTCCTGAAAGTGATCAAGAAATTAAAACTAAGCATATGGGCAGTCTaGTTGACTAGAATTTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VCVLSRQAVLKVIKKLKLSIWAV*LTRISR Trigger: CCGGGAAATTCTAGTCAATCAGACTGCCCATATGCT...TAGTTTTAATTTCTTGATCACTTTCAGGACAGCTTGCCTGGACAGCACACAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS-3UTR TCA 90 bp | GCTGAAGGTCTGTGTGCTGTCCAGGCAAGCTGTCCTGAAAGTGATCAAGAAATTATGTCATATCTGTGTTaGTATGTGCAAACGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AEGLCAVQASCPESDQEIMSYLC*YVQTMA Trigger: TGCCATCGTTTGCACATATCAACACAGATATGACAT...AATTTCTTGATCACTTTCAGGACAGCTTGCCTGGACAGCACACAGACCTTCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR TCA 90 bp | GTCTGTGTGCTGTCCAGGCAAGCTGTCCTGAAAGTGATCAAGAAATTAAAACTAATCATTCTGAGTTGTTaGGAGTGTGGACTTCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: VCVLSRQAVLKVIKKLKLIILSC*ECGLPT Trigger: GGTGGGAAGTCCACACTCTCAACAACTCAGAATGAT...TAGTTTTAATTTCTTGATCACTTTCAGGACAGCTTGCCTGGACAGCACACAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | GTCTGTGTGCTGTCCAGGCAAGCTGTCCTGAAAGTGATCAAGAAATTAAAACTACATGAAGATGAAGGCTaGTGGGCTGGGAGGTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: VCVLSRQAVLKVIKKLKLHEDEG*WAGRFI Trigger: AATAAACCTCCCAGCCCACCAGCCTTCATCTTCATG...TAGTTTTAATTTCTTGATCACTTTCAGGACAGCTTGCCTGGACAGCACACAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | GTCTGTGTGCTGTCCAGGCAAGCTGTCCTGAAAGTGATCAAGAAATTAAAACTACACCTTCATGGAATCTaGCAGTATAAGCTGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VCVLSRQAVLKVIKKLKLHLHGI*QYKLAC Trigger: GCAAGCCAGCTTATACTGCCAGATTCCATGAAGGTG...TAGTTTTAATTTCTTGATCACTTTCAGGACAGCTTGCCTGGACAGCACACAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR GCA 90 bp | CAAATTGTGTCAGCTTTAGAAATTAGAAGCTGGACAGCCAGTAATGGACTCTTCCTTCATTCACACAGCTaGAGAATCCGCACTGATAGC | + |
|
Preference number: 4 (lower is better) Translates to: QIVSALEIRSWTASNGLFLHSHS*RIRTDS Trigger: GCTATCAGTGCGGATTCTGCAGCTGTGTGAATGAAG...GAAGAGTCCATTACTGGCTGTCCAGCTTCTAATTTCTAAAGCTGACACAATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | CAAATTGTGTCAGCTTTAGAAATTAGAAGCTGGACAGCCAGTAATGGACTCTTCGAAGATGAAGGCTGGTaGGCTGGGAGGTTTATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QIVSALEIRSWTASNGLFEDEGW*AGRFIL Trigger: AAGAATAAACCTCCCAGCCCACCAGCCTTCATCTTC...GAAGAGTCCATTACTGGCTGTCCAGCTTCTAATTTCTAAAGCTGACACAATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | CAGAAAATTAGGCACCAAGTTGGAGACTGTCTCCTCAGGAATGTGACCTCAGAGAACATCTCAGGAATCTaGTCCAATAAATTGTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: QKIRHQVGDCLLRNVTSENISGI*SNKLWI Trigger: GATCCACAATTTATTGGACCAGATTCCTGAGATGTT...CTCTGAGGTCACATTCCTGAGGAGACAGTCTCCAACTTGGTGCCTAATTTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR TCA 90 bp | GTCTGTGTGCTGTCCAGGCAAGCTGTCCTGAAAGTGATCAAGAAATTAAAACTAAAACCTTTGGCTATCTaGATGTATCTGGAAAACGTT | + |
|
Preference number: 4 (lower is better) Translates to: VCVLSRQAVLKVIKKLKLKPLAI*MYLENV Trigger: AACGTTTTCCAGATACATTCAGATAGCCAAAGGTTT...TAGTTTTAATTTCTTGATCACTTTCAGGACAGCTTGCCTGGACAGCACACAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | GTCTGTGTGCTGTCCAGGCAAGCTGTCCTGAAAGTGATCAAGAAATTAAAACTAATGTTGGAAATAGAATaGTGGGACTTCATTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: VCVLSRQAVLKVIKKLKLMLEIE*WDFIHT Trigger: TGTGTGAATGAAGTCCCACCATTCTATTTCCAACAT...TAGTTTTAATTTCTTGATCACTTTCAGGACAGCTTGCCTGGACAGCACACAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CCA 90 bp | GTCTGTGTGCTGTCCAGGCAAGCTGTCCTGAAAGTGATCAAGAAATTAAAACTAGATATGTGCAAACGATaGCACATTAAATATTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VCVLSRQAVLKVIKKLKLDMCKR*HIKYSL Trigger: CAGGGAATATTTAATGTGCCATCGTTTGCACATATC...TAGTTTTAATTTCTTGATCACTTTCAGGACAGCTTGCCTGGACAGCACACAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR TCA 90 bp | CAAATTGTGTCAGCTTTAGAAATTAGAAGCTGGACAGCCAGTAATGGACTCTTCTATTCATTATCATTCTaGGTTGTTGAGAGTGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QIVSALEIRSWTASNGLFYSLSF*VVESVD Trigger: GTCCACACTCTCAACAACTCAGAATGATAATGAATA...GAAGAGTCCATTACTGGCTGTCCAGCTTCTAATTTCTAAAGCTGACACAATTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR GCA 90 bp | CAAATTGTGTCAGCTTTAGAAATTAGAAGCTGGACAGCCAGTAATGGACTCTTCATCTGTGTTGATATGTaGAAACGATGGCACATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: QIVSALEIRSWTASNGLFICVDM*KRWHIK Trigger: TTTAATGTGCCATCGTTTGCACATATCAACACAGAT...GAAGAGTCCATTACTGGCTGTCCAGCTTCTAATTTCTAAAGCTGACACAATTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS CCA 90 bp | TTGCTGTGGAGGGTAGCCAGGACCCAGGGTCTGGCCTGGTGGAGGTaGGGGCTGATACTGGGCGTTCAGAGGAGCTGGCCCAGGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLWRVARTQGLAWWR*GLILGVQRSWPRKA Trigger: GGCCTTCCTGGGCCAGCTCCTCTGAACGCCCAGTATCAGCCCCCACCTCCACCAGGCCAGACCCTGGGTCCTGGCTACCCTCCACAGCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS CCA 90 bp | GGTTGCTTGCTGTGGAGGGTAGCCAGGACCCAGGGTCTGGCCTGGTaGAGGTGGGGGCTGATACTGGGCGTTCAGAGGAGCTGGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GCLLWRVARTQGLAW*RWGLILGVQRSWPR Trigger: CCTGGGCCAGCTCCTCTGAACGCCCAGTATCAGCCCCCACCTCCACCAGGCCAGACCCTGGGTCCTGGCTACCCTCCACAGCAAGCAACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS CCA 90 bp | GTTGGTTGCTTGCTGTGGAGGGTAGCCAGGACCCAGGGTCTGGCCTaGTGGAGGTGGGGGCTGATACTGGGCGTTCAGAGGAGCTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VGCLLWRVARTQGLA*WRWGLILGVQRSWP Trigger: GGGCCAGCTCCTCTGAACGCCCAGTATCAGCCCCCACCTCCACCAGGCCAGACCCTGGGTCCTGGCTACCCTCCACAGCAAGCAACCAAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS CCA 90 bp | CTGGCCTGGTGGAGGTGGGGGCTGATACTGGGCGTTCAGAGGAGCTaGCCCAGGAAGGCCATCTTGCCTGTGAGTTGGTGGAGACATAGG | + |
|
Preference number: 5 (lower is better) Translates to: LAWWRWGLILGVQRS*PRKAILPVSWWRHR Trigger: CCTATGTCTCCACCAACTCACAGGCAAGATGGCCTTCCTGGGCCAGCTCCTCTGAACGCCCAGTATCAGCCCCCACCTCCACCAGGCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS CCA 90 bp | TGGTGCCGGCCCAGCCATCTGGGCAGGACCTCCAGGGAACCCTCCTaGGTAAGACATCTGTGCACCTCCCATCTGCGGTCCATAGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: WCRPSHLGRTSREPS*VRHLCTSHLRSIVG Trigger: ACCAACTATGGACCGCAGATGGGAGGTGCACAGATGTCTTACCCAGGAGGGTTCCCTGGAGGTCCTGCCCAGATGGCTGGGCCGGCACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS TCA 90 bp | GCAGTGGATAGAAGAAGAGCTGGGAGTCAGCCACGCCCATGGTCATaGCCAGCTGCCGCTGGTAAGCCCGCTCATCAGGGGAGATCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: AVDRRRAGSQPRPWS*PAAAGKPAHQGRSP Trigger: CGGAGATCTCCCCTGATGAGCGGGCTTACCAGCGGCAGCTGGTCATGACCATGGGCGTGGCTGACTCCCAGCTCTTCTTCTATCCACTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS-3UTR CAA 90 bp | TACCCCCACACCTCCACGGGCTTGCCACCTGAGCACTCCGAGCTGAAGGTCTGTGGGGCTCGAGTGGCCTaGGTCTTGAATCACACACTC | + |
|
Preference number: 5 (lower is better) Translates to: YPHTSTGLPPEHSELKVCGARVA*VLNHTL Trigger: GAGTGTGTGATTCAAGACCAAGGCCACTCGAGCCCC...ACAGACCTTCAGCTCGGAGTGCTCAGGTGGCAAGCCCGTGGAGGTGTGGGGGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS GCA 90 bp | CATCTGGGCAGGACCTCCAGGGAACCCTCCTGGGTAAGACATCTGTaGACCTCCCATCTGCGGTCCATAGTTGGTTGCTTGCTGTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: HLGRTSREPSWVRHL*TSHLRSIVGCLLWR Trigger: CCTCCACAGCAAGCAACCAACTATGGACCGCAGATGGGAGGTGCACAGATGTCTTACCCAGGAGGGTTCCCTGGAGGTCCTGCCCAGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS CCA 90 bp | GTCCTGGAAATCTTTGAGGAGGATGGCCTGGAGTATGGGCTCCATTaGGGCCAAACTGTGGGGGTCCAGGAGGTAAAGGACCTGGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VLEIFEEDGLEYGLH*GQTVGVQEVKDLGA Trigger: TGCCCCCAGGTCCTTTACCTCCTGGACCCCCACAGTTTGGCCCCAATGGAGCCCATACTCCAGGCCATCCTCCTCAAAGATTTCCAGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS TCA 90 bp | ACTGTGGCAGGGTCTGGCCTGACGCATAAGAGGGTGCCACACTATTaGCAGGTGGGGGTCCTGGAAATCTTTGAGGAGGATGGCCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TVAGSGLTHKRVPHY*QVGVLEIFEEDGLE Trigger: CTCCAGGCCATCCTCCTCAAAGATTTCCAGGACCCCCACCTGTCAATAGTGTGGCACCCTCTTATGCGTCAGGCCAGACCCTGCCACAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS TCA 90 bp | AGCGGGGGCTCGAGTGGCCTTGGTCTTGAATCACACACTCGGTGGTaGCCAGTGGAGGTACCTGGCCCCTGGTATTGGTCGTATAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: SGGSSGLGLESHTRW*PVEVPGPWYWSYRL Trigger: AAGTCTATACGACCAATACCAGGGGCCAGGTACCTCCACTGGTCACCACCGAGTGTGTGATTCAAGACCAAGGCCACTCGAGCCCCCGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS GCA 90 bp | GCACACTGGATCAGGGCCCCGACATCTTCACTGAGCTTGTCATCGTaGTTGAACTCCACTGTCACGGCTTTATCGCAGTCGATGGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: AHWIRAPTSSLSLSS*LNSTVTALSQSMAA Trigger: GGCGGCCATCGACTGCGATAAAGCCGTGACAGTGGAGTTCAAGCACGATGACAAGCTCAGTGAAGATGTCGGGGCCCTGATCCAGTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS TCA 90 bp | GGCGGAATGTCAGCGAAGGGTTTGATGACGGCAGCCAGTGGGATCTaGGCTTGCTTGGCCATGTCGGACGTGCACGGAAAGCAATACGTA | + |
|
Preference number: 5 (lower is better) Translates to: GGMSAKGLMTAASGI*ACLAMSDVHGKQYV Trigger: TACGTATTGCTTTCCGTGCACGTCCGACATGGCCAAGCAAGCTCAGATCCCACTGGCTGCCGTCATCAAACCCTTCGCTGACATTCCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS CCA 90 bp | GCTCGAGTGGCCTTGGTCTTGAATCACACACTCGGTGGTGACCAGTaGAGGTACCTGGCCCCTGGTATTGGTCGTATAGACTTGTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: ARVALVLNHTLGGDQ*RYLAPGIGRIDLST Trigger: GGTGGACAAGTCTATACGACCAATACCAGGGGCCAGGTACCTCCACTGGTCACCACCGAGTGTGTGATTCAAGACCAAGGCCACTCGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS-3UTR CAA 90 bp | TACCCCCACACCTCCACGGGCTTGCCACCTGAGCACTCCGAGCTGAAGGTCTGTACATCTTCACTGAGCTaGTCATCGTGCTTGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: YPHTSTGLPPEHSELKVCTSSLS*SSCLNS Trigger: GGAGTTCAAGCACGATGACAAGCTCAGTGAAGATGT...ACAGACCTTCAGCTCGGAGTGCTCAGGTGGCAAGCCCGTGGAGGTGTGGGGGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS TCA 90 bp | TGCAGTTTAAGGCGAGATTGTGAATCCGGAGTCTTCGCTGACCACTaGTGGTCGTGTAGAGCACAGCACACTGGATCAGGGCCCCGACAT | + |
|
Preference number: 5 (lower is better) Translates to: CSLRRDCESGVFADH*WSCRAQHTGSGPRH Trigger: ATGTCGGGGCCCTGATCCAGTGTGCTGTGCTCTACACGACCATCAGTGGTCAGCGAAGACTCCGGATTCACAATCTCGCCTTAAACTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS-3UTR CAA 90 bp | TACCCCCACACCTCCACGGGCTTGCCACCTGAGCACTCCGAGCTGAAGGTCTGTGATGTCATATCTGTGTaGATATGTGCAAACGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: YPHTSTGLPPEHSELKVCDVISV*ICANDG Trigger: GCCATCGTTTGCACATATCAACACAGATATGACATC...ACAGACCTTCAGCTCGGAGTGCTCAGGTGGCAAGCCCGTGGAGGTGTGGGGGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS-3UTR CAA 90 bp | TACCCCCACACCTCCACGGGCTTGCCACCTGAGCACTCCGAGCTGAAGGTCTGTCATTATCATTCTGAGTaGTTGAGAGTGTGGACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: YPHTSTGLPPEHSELKVCHYHSE*LRVWTS Trigger: GGAAGTCCACACTCTCAACAACTCAGAATGATAATG...ACAGACCTTCAGCTCGGAGTGCTCAGGTGGCAAGCCCGTGGAGGTGTGGGGGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS TCA 90 bp | GGAAGCCACATCCACAAACTGACTGGGGAAGAGGAACAGAGTCACTaGGCAGCTGTTGGCCACACAGTCTTTGGCCAGAGATTCGTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GSHIHKLTGEEEQSH*AAVGHTVFGQRFVD Trigger: GTCTACGAATCTCTGGCCAAAGACTGTGTGGCCAACAGCTGCTCAGTGACTCTGTTCCTCTTCCCCAGTCAGTTTGTGGATGTGGCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS GCA 90 bp | GGGCATCAGTTTCACAGCTCTTGTACAGATCCGCTAGCTGGGTGCTaGAGTTTAAGGCGAGATTGTGAATCCGGAGTCTTCGCTGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: GHQFHSSCTDPLAGC*SLRRDCESGVFADH Trigger: GTGGTCAGCGAAGACTCCGGATTCACAATCTCGCCTTAAACTGCAGCACCCAGCTAGCGGATCTGTACAAGAGCTGTGAAACTGATGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS CCA 90 bp | TTGCATGAACGGGCACATGTAGGCTTTGCACCTGTTGCACCTCACTaGTCCACTCTCCCCATGGTTTACCAAGTACAAGGGGGTCTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: LHERAHVGFAPVAPH*STLPMVYQVQGGLV Trigger: AACGAGACCCCCTTGTACTTGGTAAACCATGGGGAGAGTGGACCAGTGAGGTGCAACAGGTGCAAAGCCTACATGTGCCCGTTCATGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS CCA 90 bp | CCACAAACTGACTGGGGAAGAGGAACAGAGTCACTGAGCAGCTGTTaGCCACACAGTCTTTGGCCAGAGATTCGTAGACAGCTGTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PQTDWGRGTESLSSC*PHSLWPEIRRQLFG Trigger: CCCAAACAGCTGTCTACGAATCTCTGGCCAAAGACTGTGTGGCCAACAGCTGCTCAGTGACTCTGTTCCTCTTCCCCAGTCAGTTTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS-3UTR CAA 90 bp | GCTGAAGGTCTGTGTGCTGTCCAGGCAAGCTGTCCTGAAAGTGATCAAGAAATTGAGGGTGCCACACTATaGACAGGTGGGGGTCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: AEGLCAVQASCPESDQEIEGATL*TGGGPG Trigger: TCCAGGACCCCCACCTGTCAATAGTGTGGCACCCTC...AATTTCTTGATCACTTTCAGGACAGCTTGCCTGGACAGCACACAGACCTTCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS TCA 90 bp | TCGCACAGTGCTTCCGGTAACACGCCAGCATATGGGCAGTCTGATTaGCTAGAATTTCCCGGATGGCCTTCAAGGGCTGGTTCAAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: SHSASGNTPAYGQSD*LEFPGWPSRAGSKL Trigger: CAGTTTTGAACCAGCCCTTGAAGGCCATCCGGGAAATTCTAGTCAATCAGACTGCCCATATGCTGGCGTGTTACCGGAAGCACTGTGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS GCA 90 bp | TTGTTGTATGTGATGAAACCAACTCGGATTGCAGACGTCTCCTCATaGTCCTCCTTGGGTAGCCGCTTCAGCGCGGTCTTCAGCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLYVMKPTRIADVSS*SSLGSRFSAVFSSS Trigger: TGAAGAGCTGAAGACCGCGCTGAAGCGGCTACCCAAGGAGGAGCATGAGGAGACGTCTGCAATCCGAGTTGGTTTCATCACATACAACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS-3UTR CAA 90 bp | TACCCCCACACCTCCACGGGCTTGCCACCTGAGCACTCCGAGCTGAAGGTCTGTATTGTGGATCACAGATaGAGATTCTTCATAGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: YPHTSTGLPPEHSELKVCIVDHR*RFFIVD Trigger: GTCAACTATGAAGAATCTCAATCTGTGATCCACAAT...ACAGACCTTCAGCTCGGAGTGCTCAGGTGGCAAGCCCGTGGAGGTGTGGGGGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS-3UTR CAA 90 bp | TACCCCCACACCTCCACGGGCTTGCCACCTGAGCACTCCGAGCTGAAGGTCTGTAAAAGTATCTTCTCTTaGTCTGTGTTCACCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: YPHTSTGLPPEHSELKVCKSIFS*SVFTSF Trigger: AAAGCTGGTGAACACAGACAAAGAGAAGATACTTTT...ACAGACCTTCAGCTCGGAGTGCTCAGGTGGCAAGCCCGTGGAGGTGTGGGGGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS-3UTR CAA 90 bp | GCTGAAGGTCTGTGTGCTGTCCAGGCAAGCTGTCCTGAAAGTGATCAAGAAATTGTCACTGAGCAGCTGTaGGCCACACAGTCTTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AEGLCAVQASCPESDQEIVTEQL*ATQSLA Trigger: GGCCAAAGACTGTGTGGCCAACAGCTGCTCAGTGAC...AATTTCTTGATCACTTTCAGGACAGCTTGCCTGGACAGCACACAGACCTTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS-3UTR CAA 90 bp | CAGAAAATTAGGCACCAAGTTGGAGACTGTCTCCTCAGGAATGTGACCTCAGAGGGGTCCTGGAAATCTTaGAGGAGGATGGCCTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: QKIRHQVGDCLLRNVTSEGSWKS*RRMAWS Trigger: ACTCCAGGCCATCCTCCTCAAAGATTTCCAGGACCC...CTCTGAGGTCACATTCCTGAGGAGACAGTCTCCAACTTGGTGCCTAATTTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS TCA 90 bp | AACAAAGGAACAAAGACCTCTCCGACATCCGTCACCACCATCATCTaGGGCTGGGCCAGATTACTCTTCACGTTAAAGAAGTGGAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: NKGTKTSPTSVTTII*GWARLLFTLKKWRT Trigger: AGTTCTCCACTTCTTTAACGTGAAGAGTAATCTGGCCCAGCCTCAGATGATGGTGGTGACGGATGTCGGAGAGGTCTTTGTTCCTTTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS GCA 90 bp | TGGACTTCCCACCTCAGGCAGCGATGTCATATCTGTGTTGATATGTaGAAACGATGGCACATTAAATATTCCCTGAATCAGCTCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WTSHLRQRCHICVDM*KRWHIKYSLNQLWW Trigger: CCACCAGAGCTGATTCAGGGAATATTTAATGTGCCATCGTTTGCACATATCAACACAGATATGACATCGCTGCCTGAGGTGGGAAGTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS CCA 90 bp | GTAATCCAATGTAGCAACATATTCATAGGATCCCAGCGACAGCTCTaGCTTCTCATAGTGGTCCAATCTCCTTCCAATGTGGTCCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: VIQCSNIFIGSQRQL*LLIVVQSPSNVVQM Trigger: CATCTGGACCACATTGGAAGGAGATTGGACCACTATGAGAAGCCAGAGCTGTCGCTGGGATCCTATGAATATGTTGCTACATTGGATTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS-3UTR CAA 90 bp | CAAATTGTGTCAGCTTTAGAAATTAGAAGCTGGACAGCCAGTAATGGACTCTTCTCCATAGTTGGTTGCTaGCTGTGGAGGGTAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QIVSALEIRSWTASNGLFSIVGC*LWRVAR Trigger: CCTGGCTACCCTCCACAGCAAGCAACCAACTATGGA...GAAGAGTCCATTACTGGCTGTCCAGCTTCTAATTTCTAAAGCTGACACAATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS-3UTR CAA 90 bp | CAGAAAATTAGGCACCAAGTTGGAGACTGTCTCCTCAGGAATGTGACCTCAGAGTTCGTAGACAGCTGTTaGGGGCTGGAAAAGTATCTT | + |
|
Preference number: 5 (lower is better) Translates to: QKIRHQVGDCLLRNVTSEFVDSC*GLEKYL Trigger: AAGATACTTTTCCAGCCCCAAACAGCTGTCTACGAA...CTCTGAGGTCACATTCCTGAGGAGACAGTCTCCAACTTGGTGCCTAATTTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS-3UTR CAA 90 bp | GTCTGTGTGCTGTCCAGGCAAGCTGTCCTGAAAGTGATCAAGAAATTAAAACTAAGCTTGTCATCGTGCTaGAACTCCACTGTCACGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VCVLSRQAVLKVIKKLKLSLSSC*NSTVTA Trigger: AGCCGTGACAGTGGAGTTCAAGCACGATGACAAGCT...TAGTTTTAATTTCTTGATCACTTTCAGGACAGCTTGCCTGGACAGCACACAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS-3UTR CAA 90 bp | GTCTGTGTGCTGTCCAGGCAAGCTGTCCTGAAAGTGATCAAGAAATTAAAACTATCCGCCTTCGATGAATaGCATGAACGGGCACATGTA | + |
|
Preference number: 5 (lower is better) Translates to: VCVLSRQAVLKVIKKLKLSAFDE*HERAHV Trigger: TACATGTGCCCGTTCATGCAATTCATCGAAGGCGGA...TAGTTTTAATTTCTTGATCACTTTCAGGACAGCTTGCCTGGACAGCACACAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS-3UTR CAA 90 bp | GCTGAAGGTCTGTGTGCTGTCCAGGCAAGCTGTCCTGAAAGTGATCAAGAAATTTCTTCACATATGAGCTaGACGAGGCCATTCTTTATG | + |
|
Preference number: 5 (lower is better) Translates to: AEGLCAVQASCPESDQEISSHMS*TRPFFM Trigger: CATAAAGAATGGCCTCGTCAAGCTCATATGTGAAGA...AATTTCTTGATCACTTTCAGGACAGCTTGCCTGGACAGCACACAGACCTTCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS TCA 90 bp | AGCCATCTCCCGCTGCTCTCGCTGTTTAACCACGATGAGCTTCATTaGGTATGGCTTCTTTTGCTGGATATTATTCATTATCATTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SHLPLLSLFNHDELH*VWLLLLDIIHYHSE Trigger: CTCAGAATGATAATGAATAATATCCAGCAAAAGAAGCCATACTCAATGAAGCTCATCGTGGTTAAACAGCGAGAGCAGCGGGAGATGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS TCA 90 bp | TCATTGAGTATGGCTTCTTTTGCTGGATATTATTCATTATCATTCTaGGTTGTTGAGAGTGTGGACTTCCCACCTCAGGCAGCGATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLSMASFAGYYSLSF*VVESVDFPPQAAMS Trigger: TGACATCGCTGCCTGAGGTGGGAAGTCCACACTCTCAACAACTCAGAATGATAATGAATAATATCCAGCAAAAGAAGCCATACTCAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS-3UTR CAA 90 bp | CAAATTGTGTCAGCTTTAGAAATTAGAAGCTGGACAGCCAGTAATGGACTCTTCTATCATTCTGAGTTGTaGAGAGTGTGGACTTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: QIVSALEIRSWTASNGLFYHSEL*RVWTSH Trigger: GTGGGAAGTCCACACTCTCAACAACTCAGAATGATA...GAAGAGTCCATTACTGGCTGTCCAGCTTCTAATTTCTAAAGCTGACACAATTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS-3UTR CAA 90 bp | CAAATTGTGTCAGCTTTAGAAATTAGAAGCTGGACAGCCAGTAATGGACTCTTCGCTTTAAAAGCTGACTaGGCAAAGAAGTTGATAAGG | + |
|
Preference number: 5 (lower is better) Translates to: QIVSALEIRSWTASNGLFALKAD*AKKLIR Trigger: CCTTATCAACTTCTTTGCCAAGTCAGCTTTTAAAGC...GAAGAGTCCATTACTGGCTGTCCAGCTTCTAATTTCTAAAGCTGACACAATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS CCA 72 bp | TGCAGAATAGATGGCTGTGCAGGTTGTGGAGGCCCCTaGAAGGCGCCTGCTGACTGGGGGCCAGGCGGACCC | + |
|
Preference number: 6 (lower is better) Translates to: CRIDGCAGCGGP*KAPADWGPGGP Trigger: GGGTCCGCCTGGCCCCCAGTCAGCAGGCGCCTTCCAGGGGCCTCCACAACCTGCACAGCCATCTATTCTGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS CCA 72 bp | CTGTGGAGGGTAGCCAGGACCCAGGGTCTGGCCTGGTaGAGGTGGGGGCTGATACTGGGCGTTCAGAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LWRVARTQGLAW*RWGLILGVQRS Trigger: GCTCCTCTGAACGCCCAGTATCAGCCCCCACCTCCACCAGGCCAGACCCTGGGTCCTGGCTACCCTCCACAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS CCA 72 bp | ATAGGGCTGGGGATGGAGTCCGGATCCAGCTTCCTCTaGAGCTGTGGTGCCGGCCCAGCCATCTGGGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: IGLGMESGSSFL*SCGAGPAIWAG Trigger: TCCTGCCCAGATGGCTGGGCCGGCACCACAGCTCCAGAGGAAGCTGGATCCGGACTCCATCCCCAGCCCTAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS CCA 72 bp | CCCAGCCATCTGGGCAGGACCTCCAGGGAACCCTCCTaGGTAAGACATCTGTGCACCTCCCATCTGCGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PSHLGRTSREPS*VRHLCTSHLRS Trigger: GGACCGCAGATGGGAGGTGCACAGATGTCTTACCCAGGAGGGTTCCCTGGAGGTCCTGCCCAGATGGCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS TCA 72 bp | AGAAGAAGAGCTGGGAGTCAGCCACGCCCATGGTCATaGCCAGCTGCCGCTGGTAAGCCCGCTCATCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RRRAGSQPRPWS*PAAAGKPAHQG Trigger: CCCCTGATGAGCGGGCTTACCAGCGGCAGCTGGTCATGACCATGGGCGTGGCTGACTCCCAGCTCTTCTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS CAA 72 bp | CTGTGCACCTCCCATCTGCGGTCCATAGTTGGTTGCTaGCTGTGGAGGGTAGCCAGGACCCAGGGTCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LCTSHLRSIVGC*LWRVARTQGLA Trigger: GGCCAGACCCTGGGTCCTGGCTACCCTCCACAGCAAGCAACCAACTATGGACCGCAGATGGGAGGTGCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS GCA 72 bp | AGGCCCCAATGGCTTCATCACGCCTGGTGGAGAGGATaGATGGGACGGGTCCCCATAGTGTCCGTAGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RPQWLHHAWWRG*MGRVPIVSVVR Trigger: CCTCACTACGGACACTATGGGGACCCGTCCCATGCATCCTCTCCACCAGGCGTGATGAAGCCATTGGGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS CAA 90 bp | GTAAGACATCTGTGCACCTCCCATCTGCGGTCCATAGTTGGTTGCTaGCTGTGGAGGGTAGCCAGGACCCAGGGTCTGGCCTGGTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: VRHLCTSHLRSIVGC*LWRVARTQGLAWWR Trigger: CCTCCACCAGGCCAGACCCTGGGTCCTGGCTACCCTCCACAGCAAGCAACCAACTATGGACCGCAGATGGGAGGTGCACAGATGTCTTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS CCA 72 bp | AGGTGGGGGTCCTGGAAATCTTTGAGGAGGATGGCCTaGAGTATGGGCTCCATTGGGGCCAAACTGTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RWGSWKSLRRMA*SMGSIGAKLWG Trigger: CCCCCACAGTTTGGCCCCAATGGAGCCCATACTCCAGGCCATCCTCCTCAAAGATTTCCAGGACCCCCACCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS CCA 72 bp | GGGCACTCTGCTGCCTTCAGGGCCTCCATGCCGGCCTaGATGACCGGGGCAAAGACTGTCTCGTTTTCATTA | + |
|
Preference number: 6 (lower is better) Translates to: GHSAAFRASMPA*MTGAKTVSFSL Trigger: TAATGAAAACGAGACAGTCTTTGCCCCGGTCATCCAGGCCGGCATGGAGGCCCTGAAGGCAGCAGAGTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS CAA 72 bp | GCAGCGGATATAGCGGGGGCTCGAGTGGCCTTGGTCTaGAATCACACACTCGGTGGTGACCAGTGGAGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: AADIAGARVALV*NHTLGGDQWRY Trigger: GTACCTCCACTGGTCACCACCGAGTGTGTGATTCAAGACCAAGGCCACTCGAGCCCCCGCTATATCCGCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS CAA 72 bp | CGTAGTGCAGCGGATATAGCGGGGGCTCGAGTGGCCTaGGTCTTGAATCACACACTCGGTGGTGACCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RSAADIAGARVA*VLNHTLGGDQW Trigger: CCACTGGTCACCACCGAGTGTGTGATTCAAGACCAAGGCCACTCGAGCCCCCGCTATATCCGCTGCACTACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS CAA 90 bp | ACTGGTCCACTCTCCCCATGGTTTACCAAGTACAAGGGGGTCTCGTaGGGCGGAATGTCAGCGAAGGGTTTGATGACGGCAGCCAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: TGPLSPWFTKYKGVS*GGMSAKGLMTAASG Trigger: CCCACTGGCTGCCGTCATCAAACCCTTCGCTGACATTCCGCCCAACGAGACCCCCTTGTACTTGGTAAACCATGGGGAGAGTGGACCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS TCA 72 bp | TCGAGTGGCCTTGGTCTTGAATCACACACTCGGTGGTaGCCAGTGGAGGTACCTGGCCCCTGGTATTGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: SSGLGLESHTRW*PVEVPGPWYWS Trigger: CGACCAATACCAGGGGCCAGGTACCTCCACTGGTCACCACCGAGTGTGTGATTCAAGACCAAGGCCACTCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS TCA 72 bp | TCAGCGAAGGGTTTGATGACGGCAGCCAGTGGGATCTaGGCTTGCTTGGCCATGTCGGACGTGCACGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SAKGLMTAASGI*ACLAMSDVHGK Trigger: CTTTCCGTGCACGTCCGACATGGCCAAGCAAGCTCAGATCCCACTGGCTGCCGTCATCAAACCCTTCGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS CAA 72 bp | CCAACTCGGATTGCAGACGTCTCCTCATGCTCCTCCTaGGGTAGCCGCTTCAGCGCGGTCTTCAGCTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PTRIADVSSCSS*GSRFSAVFSSS Trigger: TGAAGAGCTGAAGACCGCGCTGAAGCGGCTACCCAAGGAGGAGCATGAGGAGACGTCTGCAATCCGAGTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS TCA 72 bp | GCCACACTATTGACAGGTGGGGGTCCTGGAAATCTTTaGGGAGGATGGCCTGGAGTATGGGCTCCATTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: ATLLTGGGPGNL*GGWPGVWAPLG Trigger: CCCCAATGGAGCCCATACTCCAGGCCATCCTCCTCAAAGATTTCCAGGACCCCCACCTGTCAATAGTGTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS TCA 72 bp | TGTCCACCTCTGGTGGCCCTGTCATTCTCGATCACTTaGATAGGGCTGGGGATGGAGTCCGGATCCAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: CPPLVALSFSIT*IGLGMESGSSF Trigger: GAAGCTGGATCCGGACTCCATCCCCAGCCCTATTCAAGTGATCGAGAATGACAGGGCCACCAGAGGTGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS GCA 72 bp | AGGACCTCCAGGGAACCCTCCTGGGTAAGACATCTGTaGACCTCCCATCTGCGGTCCATAGTTGGTTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RTSREPSWVRHL*TSHLRSIVGCL Trigger: CAAGCAACCAACTATGGACCGCAGATGGGAGGTGCACAGATGTCTTACCCAGGAGGGTTCCCTGGAGGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS GCA 72 bp | GTGATGAAACCAACTCGGATTGCAGACGTCTCCTCATaGTCCTCCTTGGGTAGCCGCTTCAGCGCGGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VMKPTRIADVSS*SSLGSRFSAVF Trigger: GAAGACCGCGCTGAAGCGGCTACCCAAGGAGGAGCATGAGGAGACGTCTGCAATCCGAGTTGGTTTCATCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS CCA 72 bp | ATCTTTGAGGAGGATGGCCTGGAGTATGGGCTCCATTaGGGCCAAACTGTGGGGGTCCAGGAGGTAAAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: IFEEDGLEYGLH*GQTVGVQEVKD Trigger: GTCCTTTACCTCCTGGACCCCCACAGTTTGGCCCCAATGGAGCCCATACTCCAGGCCATCCTCCTCAAAGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS CAA 90 bp | CGTATAGACTTGTCCACCTCTGGTGGCCCTGTCATTCTCGATCACTaGAATAGGGCTGGGGATGGAGTCCGGATCCAGCTTCCTCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RIDLSTSGGPVILDH*NRAGDGVRIQLPLE Trigger: CTCCAGAGGAAGCTGGATCCGGACTCCATCCCCAGCCCTATTCAAGTGATCGAGAATGACAGGGCCACCAGAGGTGGACAAGTCTATACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS CAA 90 bp | ACAGCTGCAGAATCCGCACTGATAGCGCCGTCCGCCTTCGATGAATaGCATGAACGGGCACATGTAGGCTTTGCACCTGTTGCACCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: TAAESALIAPSAFDE*HERAHVGFAPVAPH Trigger: GTGAGGTGCAACAGGTGCAAAGCCTACATGTGCCCGTTCATGCAATTCATCGAAGGCGGACGGCGCTATCAGTGCGGATTCTGCAGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS CAA 90 bp | CACTGGATCAGGGCCCCGACATCTTCACTGAGCTTGTCATCGTGCTaGAACTCCACTGTCACGGCTTTATCGCAGTCGATGGCCGCCATT | + |
|
Preference number: 6 (lower is better) Translates to: HWIRAPTSSLSLSSC*NSTVTALSQSMAAI Trigger: AATGGCGGCCATCGACTGCGATAAAGCCGTGACAGTGGAGTTCAAGCACGATGACAAGCTCAGTGAAGATGTCGGGGCCCTGATCCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
||
| CDS TCA 72 bp | GGGTCTGGCCTGACGCATAAGAGGGTGCCACACTATTaGCAGGTGGGGGTCCTGGAAATCTTTGAGGAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: GSGLTHKRVPHY*QVGVLEIFEED Trigger: ATCCTCCTCAAAGATTTCCAGGACCCCCACCTGTCAATAGTGTGGCACCCTCTTATGCGTCAGGCCAGACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS TCA 72 bp | AGGCGAGATTGTGAATCCGGAGTCTTCGCTGACCACTaGTGGTCGTGTAGAGCACAGCACACTGGATCAGGG | + |
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Preference number: 6 (lower is better) Translates to: RRDCESGVFADH*WSCRAQHTGSG Trigger: CCCTGATCCAGTGTGCTGTGCTCTACACGACCATCAGTGGTCAGCGAAGACTCCGGATTCACAATCTCGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS CCA 72 bp | GCCTTGGTCTTGAATCACACACTCGGTGGTGACCAGTaGAGGTACCTGGCCCCTGGTATTGGTCGTATAGAC | + |
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Preference number: 6 (lower is better) Translates to: ALVLNHTLGGDQ*RYLAPGIGRID Trigger: GTCTATACGACCAATACCAGGGGCCAGGTACCTCCACTGGTCACCACCGAGTGTGTGATTCAAGACCAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS CCA 72 bp | CGGGCACATGTAGGCTTTGCACCTGTTGCACCTCACTaGTCCACTCTCCCCATGGTTTACCAAGTACAAGGG | + |
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Preference number: 6 (lower is better) Translates to: RAHVGFAPVAPH*STLPMVYQVQG Trigger: CCCTTGTACTTGGTAAACCATGGGGAGAGTGGACCAGTGAGGTGCAACAGGTGCAAAGCCTACATGTGCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS CAA 72 bp | TGCCACACTATTGACAGGTGGGGGTCCTGGAAATCTTaGAGGAGGATGGCCTGGAGTATGGGCTCCATTGGG | + |
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Preference number: 6 (lower is better) Translates to: CHTIDRWGSWKS*RRMAWSMGSIG Trigger: CCCAATGGAGCCCATACTCCAGGCCATCCTCCTCAAAGATTTCCAGGACCCCCACCTGTCAATAGTGTGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS CAA 72 bp | TTGTCCACCTCTGGTGGCCCTGTCATTCTCGATCACTaGAATAGGGCTGGGGATGGAGTCCGGATCCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: LSTSGGPVILDH*NRAGDGVRIQL Trigger: AAGCTGGATCCGGACTCCATCCCCAGCCCTATTCAAGTGATCGAGAATGACAGGGCCACCAGAGGTGGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS CAA 72 bp | GAAGGGTTTGATGACGGCAGCCAGTGGGATCTGAGCTaGCTTGGCCATGTCGGACGTGCACGGAAAGCAATA | + |
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Preference number: 6 (lower is better) Translates to: EGFDDGSQWDLS*LGHVGRARKAI Trigger: TATTGCTTTCCGTGCACGTCCGACATGGCCAAGCAAGCTCAGATCCCACTGGCTGCCGTCATCAAACCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS CAA 90 bp | ATAAGAGGGTGCCACACTATTGACAGGTGGGGGTCCTGGAAATCTTaGAGGAGGATGGCCTGGAGTATGGGCTCCATTGGGGCCAAACTG | + |
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Preference number: 6 (lower is better) Translates to: IRGCHTIDRWGSWKS*RRMAWSMGSIGAKL Trigger: CAGTTTGGCCCCAATGGAGCCCATACTCCAGGCCATCCTCCTCAAAGATTTCCAGGACCCCCACCTGTCAATAGTGTGGCACCCTCTTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS CAA 90 bp | AATGTCAGCGAAGGGTTTGATGACGGCAGCCAGTGGGATCTGAGCTaGCTTGGCCATGTCGGACGTGCACGGAAAGCAATACGTAGTGCA | + |
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Preference number: 6 (lower is better) Translates to: NVSEGFDDGSQWDLS*LGHVGRARKAIRSA Trigger: TGCACTACGTATTGCTTTCCGTGCACGTCCGACATGGCCAAGCAAGCTCAGATCCCACTGGCTGCCGTCATCAAACCCTTCGCTGACATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS TCA 72 bp | GCTTCCGGTAACACGCCAGCATATGGGCAGTCTGATTaGCTAGAATTTCCCGGATGGCCTTCAAGGGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: ASGNTPAYGQSD*LEFPGWPSRAG Trigger: ACCAGCCCTTGAAGGCCATCCGGGAAATTCTAGTCAATCAGACTGCCCATATGCTGGCGTGTTACCGGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS CCA 72 bp | ATAAGAGGGTGCCACACTATTGACAGGTGGGGGTCCTaGAAATCTTTGAGGAGGATGGCCTGGAGTATGGGC | + |
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Preference number: 6 (lower is better) Translates to: IRGCHTIDRWGS*KSLRRMAWSMG Trigger: GCCCATACTCCAGGCCATCCTCCTCAAAGATTTCCAGGACCCCCACCTGTCAATAGTGTGGCACCCTCTTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS CCA 72 bp | GACTGGGGAAGAGGAACAGAGTCACTGAGCAGCTGTTaGCCACACAGTCTTTGGCCAGAGATTCGTAGACAG | + |
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Preference number: 6 (lower is better) Translates to: DWGRGTESLSSC*PHSLWPEIRRQ Trigger: CTGTCTACGAATCTCTGGCCAAAGACTGTGTGGCCAACAGCTGCTCAGTGACTCTGTTCCTCTTCCCCAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS CAA 72 bp | GAATCCGCACTGATAGCGCCGTCCGCCTTCGATGAATaGCATGAACGGGCACATGTAGGCTTTGCACCTGTT | + |
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Preference number: 6 (lower is better) Translates to: ESALIAPSAFDE*HERAHVGFAPV Trigger: AACAGGTGCAAAGCCTACATGTGCCCGTTCATGCAATTCATCGAAGGCGGACGGCGCTATCAGTGCGGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS CAA 72 bp | AGGGCCCCGACATCTTCACTGAGCTTGTCATCGTGCTaGAACTCCACTGTCACGGCTTTATCGCAGTCGATG | + |
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Preference number: 6 (lower is better) Translates to: RAPTSSLSLSSC*NSTVTALSQSM Trigger: CATCGACTGCGATAAAGCCGTGACAGTGGAGTTCAAGCACGATGACAAGCTCAGTGAAGATGTCGGGGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS TCA 72 bp | ATCCACAAACTGACTGGGGAAGAGGAACAGAGTCACTaGGCAGCTGTTGGCCACACAGTCTTTGGCCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: IHKLTGEEEQSH*AAVGHTVFGQR Trigger: TCTCTGGCCAAAGACTGTGTGGCCAACAGCTGCTCAGTGACTCTGTTCCTCTTCCCCAGTCAGTTTGTGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS GCA 72 bp | GTTGGAAATAGAATGGTGGGACTTCATTCACACAGCTaGAGAATCCGCACTGATAGCGCCGTCCGCCTTCGA | + |
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Preference number: 6 (lower is better) Translates to: VGNRMVGLHSHS*RIRTDSAVRLR Trigger: TCGAAGGCGGACGGCGCTATCAGTGCGGATTCTGCAGCTGTGTGAATGAAGTCCCACCATTCTATTTCCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS CCA 72 bp | ACTGTTCATGTACACAGGCAGCACCTTCATGGAATCTaGCAGTATAAGCTGGCTTGCTGCAGACGGACTCGC | + |
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Preference number: 6 (lower is better) Translates to: TVHVHRQHLHGI*QYKLACCRRTR Trigger: GCGAGTCCGTCTGCAGCAAGCCAGCTTATACTGCCAGATTCCATGAAGGTGCTGCCTGTGTACATGAACAGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS GCA 72 bp | CAGTTTCACAGCTCTTGTACAGATCCGCTAGCTGGGTaGTGCAGTTTAAGGCGAGATTGTGAATCCGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: QFHSSCTDPLAG*CSLRRDCESGV Trigger: GACTCCGGATTCACAATCTCGCCTTAAACTGCAGCACCCAGCTAGCGGATCTGTACAAGAGCTGTGAAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS TCA 72 bp | ACAAAGACCTCTCCGACATCCGTCACCACCATCATCTaGGGCTGGGCCAGATTACTCTTCACGTTAAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: TKTSPTSVTTII*GWARLLFTLKK Trigger: CTTCTTTAACGTGAAGAGTAATCTGGCCCAGCCTCAGATGATGGTGGTGACGGATGTCGGAGAGGTCTTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS GCA 72 bp | TTTCACAGCTCTTGTACAGATCCGCTAGCTGGGTGCTaGAGTTTAAGGCGAGATTGTGAATCCGGAGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: FHSSCTDPLAGC*SLRRDCESGVF Trigger: GAAGACTCCGGATTCACAATCTCGCCTTAAACTGCAGCACCCAGCTAGCGGATCTGTACAAGAGCTGTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS CAA 90 bp | ATCTTCTCTTTGTCTGTGTTCACCAGCTTTTTGTCGTCTCTGTTCTaGAGCTTCCCCGGTGCTTCGGCAGTAGGCAAAGAGGAATGGAAG | + |
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Preference number: 6 (lower is better) Translates to: IFSLSVFTSFLSSLF*SFPGASAVGKEEWK Trigger: CTTCCATTCCTCTTTGCCTACTGCCGAAGCACCGGGGAAGCTCAAGAACAGAGACGACAAAAAGCTGGTGAACACAGACAAAGAGAAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS CAA 90 bp | GCTGACTTGGCAAAGAAGTTGATAAGGGCATCAGTTTCACAGCTCTaGTACAGATCCGCTAGCTGGGTGCTGCAGTTTAAGGCGAGATTG | + |
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Preference number: 6 (lower is better) Translates to: ADLAKKLIRASVSQL*YRSASWVLQFKARL Trigger: CAATCTCGCCTTAAACTGCAGCACCCAGCTAGCGGATCTGTACAAGAGCTGTGAAACTGATGCCCTTATCAACTTCTTTGCCAAGTCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS TCA 72 bp | TCTGGAAAACGTTGTATTTGTAAAGAGTTCCTCCCGTaGGCAGAGGAACCAGACCCAAGGAAGCCACATCCA | + |
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Preference number: 6 (lower is better) Translates to: SGKRCICKEFLP*AEEPDPRKPHP Trigger: TGGATGTGGCTTCCTTGGGTCTGGTTCCTCTGCTCACGGGAGGAACTCTTTACAAATACAACGTTTTCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS CAA 90 bp | TGGCTTCTCATAGTGGTCCAATCTCCTTCCAATGTGGTCCAGATGTaGGAAATAGAATGGTGGGACTTCATTCACACAGCTGCAGAATCC | + |
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Preference number: 6 (lower is better) Translates to: WLLIVVQSPSNVVQM*EIEWWDFIHTAAES Trigger: GGATTCTGCAGCTGTGTGAATGAAGTCCCACCATTCTATTTCCAACATCTGGACCACATTGGAAGGAGATTGGACCACTATGAGAAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS CAA 90 bp | TTGGGTAGCCGCTTCAGCGCGGTCTTCAGCTCTTCACATATGAGCTaGACGAGGCCATTCTTTATGTTACTATATGAGACATCAATCATG | + |
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Preference number: 6 (lower is better) Translates to: LGSRFSAVFSSSHMS*TRPFFMLLYETSIM Trigger: CATGATTGATGTCTCATATAGTAACATAAAGAATGGCCTCGTCAAGCTCATATGTGAAGAGCTGAAGACCGCGCTGAAGCGGCTACCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS CAA 72 bp | CGCTTCAGCGCGGTCTTCAGCTCTTCACATATGAGCTaGACGAGGCCATTCTTTATGTTACTATATGAGACA | + |
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Preference number: 6 (lower is better) Translates to: RFSAVFSSSHMS*TRPFFMLLYET Trigger: TGTCTCATATAGTAACATAAAGAATGGCCTCGTCAAGCTCATATGTGAAGAGCTGAAGACCGCGCTGAAGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS CAA 72 bp | GGACTTCCCACCTCAGGCAGCGATGTCATATCTGTGTaGATATGTGCAAACGATGGCACATTAAATATTCCC | + |
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Preference number: 6 (lower is better) Translates to: GLPTSGSDVISV*ICANDGTLNIP Trigger: GGGAATATTTAATGTGCCATCGTTTGCACATATCAACACAGATATGACATCGCTGCCTGAGGTGGGAAGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS CAA 72 bp | ATAGTGGTCCAATCTCCTTCCAATGTGGTCCAGATGTaGGAAATAGAATGGTGGGACTTCATTCACACAGCT | + |
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Preference number: 6 (lower is better) Translates to: IVVQSPSNVVQM*EIEWWDFIHTA Trigger: AGCTGTGTGAATGAAGTCCCACCATTCTATTTCCAACATCTGGACCACATTGGAAGGAGATTGGACCACTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS GCA 72 bp | CACCTCAGGCAGCGATGTCATATCTGTGTTGATATGTaGAAACGATGGCACATTAAATATTCCCTGAATCAG | + |
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Preference number: 6 (lower is better) Translates to: HLRQRCHICVDM*KRWHIKYSLNQ Trigger: CTGATTCAGGGAATATTTAATGTGCCATCGTTTGCACATATCAACACAGATATGACATCGCTGCCTGAGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS TCA 72 bp | CCGCTGCTCTCGCTGTTTAACCACGATGAGCTTCATTaGGTATGGCTTCTTTTGCTGGATATTATTCATTAT | + |
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Preference number: 6 (lower is better) Translates to: PLLSLFNHDELH*VWLLLLDIIHY Trigger: ATAATGAATAATATCCAGCAAAAGAAGCCATACTCAATGAAGCTCATCGTGGTTAAACAGCGAGAGCAGCGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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| CDS CCA 72 bp | TTCTCAATATCATTCCGGAGGTCGGTCAGAAACCTTTaGCTATCTGAATGTATCTGGAAAACGTTGTATTTG | + |
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Preference number: 6 (lower is better) Translates to: FSISFRRSVRNL*LSECIWKTLYL Trigger: CAAATACAACGTTTTCCAGATACATTCAGATAGCCAAAGGTTTCTGACCGACCTCCGGAATGATATTGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047923.12 |
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