Pregenerated sensors for SEC24B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001052Ensembl transcript IDs: ENSMUST00000001079.15, ENSMUST00000165873.8, ENSMUST00000168644.3
Found 250 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCGTGGTCCTCAGGTCTGCTGGCTGGCAGAGGGGCACCGCACTGCTaGTCTCCTGAGAGGACGCAAAAACCGACTCTGTCTGCTGCCTCA | + |
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Preference number: 1 (lower is better) Translates to: PWSSGLLAGRGAPHC*SPERTQKPTLSAAS Trigger: TGAGGCAGCAGACAGAGTCGGTTTTTGCGTCCTCTCAGGAGAGCAGCAGTGCGGTGCCCCTCTGCCAGCCAGCAGACCTGAGGACCACGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| 3UTR GCA 90 bp | TATCTAGTTCCAGAGCATGACATGTCATTCCGTGGTCCTCAGGTCTaGTGGCTGGCAGAGGGGCACCGCACTGCTGCTCTCCTGAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: YLVPEHDMSFRGPQV*WLAEGHRTAALLRG Trigger: TCCTCTCAGGAGAGCAGCAGTGCGGTGCCCCTCTGCCAGCCAGCAGACCTGAGGACCACGGAATGACATGTCATGCTCTGGAACTAGATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| 3UTR TCA 90 bp | GTCCAGAATGCTAACTGTACGATGACTCTATCTAGTTCCAGAGCATaGCATGTCATTCCGTGGTCCTCAGGTCTGCTGGCTGGCAGAGGG | + |
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Preference number: 1 (lower is better) Translates to: VQNANCTMTLSSSRA*HVIPWSSGLLAGRG Trigger: CCCTCTGCCAGCCAGCAGACCTGAGGACCACGGAATGACATGTCATGCTCTGGAACTAGATAGAGTCATCGTACAGTTAGCATTCTGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| 3UTR CCA 90 bp | TTGGAGGGGCTCTGCTGTGTCTTGTTCTCTCTTCCCCTTAATCTCTaGCCCAAGCCTCAGAGTGATGTGCATCGTTCTTCTAGCAGCAAA | + |
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Preference number: 1 (lower is better) Translates to: LEGLCCVLFSLPLNL*PKPQSDVHRSSSSK Trigger: TTTGCTGCTAGAAGAACGATGCACATCACTCTGAGGCTTGGGCCAGAGATTAAGGGGAAGAGAGAACAAGACACAGCAGAGCCCCTCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| 3UTR GCA 90 bp | GAGTCGTTCCTGTTAAGAAGTAATTCATACAAGCGAGTACCACAGTaGCGCTGCCCTTCGGCATCTCTCATCAGAGTTCAAGTCCAGAAT | + |
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Preference number: 1 (lower is better) Translates to: ESFLLRSNSYKRVPQ*RCPSASLIRVQVQN Trigger: ATTCTGGACTTGAACTCTGATGAGAGATGCCGAAGGGCAGCGGCACTGTGGTACTCGCTTGTATGAATTACTTCTTAACAGGAACGACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| 3UTR TCA 90 bp | CGGCATCTCTCATCAGAGTTCAAGTCCAGAATGCTAACTGTACGATaGCTCTATCTAGTTCCAGAGCATGACATGTCATTCCGTGGTCCT | + |
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Preference number: 1 (lower is better) Translates to: RHLSSEFKSRMLTVR*LYLVPEHDMSFRGP Trigger: AGGACCACGGAATGACATGTCATGCTCTGGAACTAGATAGAGTCATCGTACAGTTAGCATTCTGGACTTGAACTCTGATGAGAGATGCCG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| 3UTR GCA 90 bp | TTCCTGTTAAGAAGTAATTCATACAAGCGAGTACCACAGTGCCGCTaGCCTTCGGCATCTCTCATCAGAGTTCAAGTCCAGAATGCTAAC | + |
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Preference number: 1 (lower is better) Translates to: FLLRSNSYKRVPQCR*PSASLIRVQVQNAN Trigger: GTTAGCATTCTGGACTTGAACTCTGATGAGAGATGCCGAAGGGCAGCGGCACTGTGGTACTCGCTTGTATGAATTACTTCTTAACAGGAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| 3UTR GCA 90 bp | GAATTACAAAGTCTCATGTTTCTTTTGTGGACTCAATTCATAATATaGATTAGTCAACCTCATTCCCTCACTGTGACAGAGTTGTCAGCC | + |
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Preference number: 1 (lower is better) Translates to: ELQSLMFLLWTQFII*ISQPHSLTVTELSA Trigger: GGCTGACAACTCTGTCACAGTGAGGGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAAGAAACATGAGACTTTGTAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| 3UTR-3UTR GCA 90 bp | CGCTGCCCTTCGGCATCTCTCATCAGAGTTCAAGTCCAGAATGCTAACTGTACGCGTGGTCCTCAGGTCTaGTGGCTGGCAGAGGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: RCPSASLIRVQVQNANCTRGPQV*WLAEGH Trigger: GTGCCCCTCTGCCAGCCAGCAGACCTGAGGACCACG...CGTACAGTTAGCATTCTGGACTTGAACTCTGATGAGAGATGCCGAAGGGCAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| 3UTR-3UTR GCA 90 bp | CGCTGCCCTTCGGCATCTCTCATCAGAGTTCAAGTCCAGAATGCTAACTGTACGAGAGGGGCACCGCACTaGTGCTCTCCTGAGAGGACG | + |
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Preference number: 2 (lower is better) Translates to: RCPSASLIRVQVQNANCTRGAPH*CSPERT Trigger: CGTCCTCTCAGGAGAGCAGCAGTGCGGTGCCCCTCT...CGTACAGTTAGCATTCTGGACTTGAACTCTGATGAGAGATGCCGAAGGGCAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| 3UTR-3UTR CCA 90 bp | GTCAGCCAACATTGCAGCACAGTTGAAGCAATTCATCTTCTTAGTTACAGCTTAGGTCCTCAGGTCTGCTaGCTGGCAGAGGGGCACCGC | + |
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Preference number: 2 (lower is better) Translates to: VSQHCSTVEAIHLLSYSLGPQVC*LAEGHR Trigger: GCGGTGCCCCTCTGCCAGCCAGCAGACCTGAGGACC...TAAGCTGTAACTAAGAAGATGAATTGCTTCAACTGTGCTGCAATGTTGGCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| 3UTR-3UTR GCA 90 bp | AATGGATCATCACCAATCTTTATAGTAAACAGCCTGCTGGGAACGACAGAATTCAAAACCGACTCTGTCTaGTGCCTCAGCGTCCTTGGA | + |
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Preference number: 2 (lower is better) Translates to: NGSSPIFIVNSLLGTTEFKTDSV*CLSVLG Trigger: TCCAAGGACGCTGAGGCAGCAGACAGAGTCGGTTTT...GAATTCTGTCGTTCCCAGCAGGCTGTTTACTATAAAGATTGGTGATGATCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| 3UTR-3UTR CCA 90 bp | CCAATCTTTATAGTAAACAGCCTGCTGGGAACGACAGAATTCCTGATCAGAACACTTCCCCTTAATCTCTaGCCCAAGCCTCAGAGTGAT | + |
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Preference number: 2 (lower is better) Translates to: PIFIVNSLLGTTEFLIRTLPLNL*PKPQSD Trigger: ATCACTCTGAGGCTTGGGCCAGAGATTAAGGGGAAG...TGTTCTGATCAGGAATTCTGTCGTTCCCAGCAGGCTGTTTACTATAAAGATTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| 3UTR-3UTR GCA 90 bp | AATGGATCATCACCAATCTTTATAGTAAACAGCCTGCTGGGAACGACAGAATTCTCCTTGGAGGGGCTCTaGTGTGTCTTGTTCTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: NGSSPIFIVNSLLGTTEFSLEGL*CVLFSL Trigger: AAGAGAGAACAAGACACAGCAGAGCCCCTCCAAGGA...GAATTCTGTCGTTCCCAGCAGGCTGTTTACTATAAAGATTGGTGATGATCCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| 3UTR-3UTR GCA 90 bp | CCAATCTTTATAGTAAACAGCCTGCTGGGAACGACAGAATTCCTGATCAGAACAGTTGTCAGCCAACATTaGAGCACAGTTGAAGCAATT | + |
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Preference number: 2 (lower is better) Translates to: PIFIVNSLLGTTEFLIRTVVSQH*STVEAI Trigger: AATTGCTTCAACTGTGCTGCAATGTTGGCTGACAAC...TGTTCTGATCAGGAATTCTGTCGTTCCCAGCAGGCTGTTTACTATAAAGATTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| 3UTR CAA 90 bp | TTCATAATATGCATTAGTCAACCTCATTCCCTCACTGTGACAGAGTaGTCAGCCAACATTGCAGCACAGTTGAAGCAATTCATCTTCTTA | + |
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Preference number: 2 (lower is better) Translates to: FIICISQPHSLTVTE*SANIAAQLKQFIFL Trigger: TAAGAAGATGAATTGCTTCAACTGTGCTGCAATGTTGGCTGACAACTCTGTCACAGTGAGGGAATGAGGTTGACTAATGCATATTATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| 3UTR TCA 72 bp | GCTGGCTGGCAGAGGGGCACCGCACTGCTGCTCTCCTaGGAGGACGCAAAAACCGACTCTGTCTGCTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: AGWQRGTALLLS*EDAKTDSVCCL Trigger: GAGGCAGCAGACAGAGTCGGTTTTTGCGTCCTCTCAGGAGAGCAGCAGTGCGGTGCCCCTCTGCCAGCCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| 3UTR GCA 72 bp | CCAGAGCATGACATGTCATTCCGTGGTCCTCAGGTCTaGTGGCTGGCAGAGGGGCACCGCACTGCTGCTCTC | + |
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Preference number: 3 (lower is better) Translates to: PEHDMSFRGPQV*WLAEGHRTAAL Trigger: GAGAGCAGCAGTGCGGTGCCCCTCTGCCAGCCAGCAGACCTGAGGACCACGGAATGACATGTCATGCTCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| 3UTR CCA 72 bp | GAGCATGACATGTCATTCCGTGGTCCTCAGGTCTGCTaGCTGGCAGAGGGGCACCGCACTGCTGCTCTCCTG | + |
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Preference number: 3 (lower is better) Translates to: EHDMSFRGPQVC*LAEGHRTAALL Trigger: CAGGAGAGCAGCAGTGCGGTGCCCCTCTGCCAGCCAGCAGACCTGAGGACCACGGAATGACATGTCATGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| 3UTR GCA 72 bp | TCAGGTCTGCTGGCTGGCAGAGGGGCACCGCACTGCTaGTCTCCTGAGAGGACGCAAAAACCGACTCTGTCT | + |
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Preference number: 3 (lower is better) Translates to: SGLLAGRGAPHC*SPERTQKPTLS Trigger: AGACAGAGTCGGTTTTTGCGTCCTCTCAGGAGAGCAGCAGTGCGGTGCCCCTCTGCCAGCCAGCAGACCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| 3UTR CCA 72 bp | CGCAAAAACCGACTCTGTCTGCTGCCTCAGCGTCCTTaGAGGGGCTCTGCTGTGTCTTGTTCTCTCTTCCCC | + |
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Preference number: 3 (lower is better) Translates to: RKNRLCLLPQRP*RGSAVSCSLFP Trigger: GGGGAAGAGAGAACAAGACACAGCAGAGCCCCTCCAAGGACGCTGAGGCAGCAGACAGAGTCGGTTTTTGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| 3UTR GCA 72 bp | ACTCTGTCTGCTGCCTCAGCGTCCTTGGAGGGGCTCTaGTGTGTCTTGTTCTCTCTTCCCCTTAATCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: TLSAASASLEGL*CVLFSLPLNLW Trigger: CCAGAGATTAAGGGGAAGAGAGAACAAGACACAGCAGAGCCCCTCCAAGGACGCTGAGGCAGCAGACAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| 3UTR-3UTR CAA 90 bp | TGTGACAGAGTTGTCAGCCAACATTGCAGCACAGTTGAAGCAATTCATCTTCTTGCTGCCTCAGCGTCCTaGGAGGGGCTCTGCTGTGTC | + |
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Preference number: 3 (lower is better) Translates to: CDRVVSQHCSTVEAIHLLAASAS*EGLCCV Trigger: GACACAGCAGAGCCCCTCCAAGGACGCTGAGGCAGC...AAGAAGATGAATTGCTTCAACTGTGCTGCAATGTTGGCTGACAACTCTGTCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| 3UTR TCA 72 bp | GCTAACTGTACGATGACTCTATCTAGTTCCAGAGCATaGCATGTCATTCCGTGGTCCTCAGGTCTGCTGGCT | + |
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Preference number: 3 (lower is better) Translates to: ANCTMTLSSSRA*HVIPWSSGLLA Trigger: AGCCAGCAGACCTGAGGACCACGGAATGACATGTCATGCTCTGGAACTAGATAGAGTCATCGTACAGTTAGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| 3UTR GCA 72 bp | AGAAGTAATTCATACAAGCGAGTACCACAGTGCCGCTaGCCTTCGGCATCTCTCATCAGAGTTCAAGTCCAG | + |
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Preference number: 3 (lower is better) Translates to: RSNSYKRVPQCR*PSASLIRVQVQ Trigger: CTGGACTTGAACTCTGATGAGAGATGCCGAAGGGCAGCGGCACTGTGGTACTCGCTTGTATGAATTACTTCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| 3UTR CCA 72 bp | CTCTGCTGTGTCTTGTTCTCTCTTCCCCTTAATCTCTaGCCCAAGCCTCAGAGTGATGTGCATCGTTCTTCT | + |
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Preference number: 3 (lower is better) Translates to: LCCVLFSLPLNL*PKPQSDVHRSS Trigger: AGAAGAACGATGCACATCACTCTGAGGCTTGGGCCAGAGATTAAGGGGAAGAGAGAACAAGACACAGCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| 3UTR GCA 72 bp | CTGTTAAGAAGTAATTCATACAAGCGAGTACCACAGTaGCGCTGCCCTTCGGCATCTCTCATCAGAGTTCAA | + |
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Preference number: 3 (lower is better) Translates to: LLRSNSYKRVPQ*RCPSASLIRVQ Trigger: TTGAACTCTGATGAGAGATGCCGAAGGGCAGCGGCACTGTGGTACTCGCTTGTATGAATTACTTCTTAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| 3UTR-3UTR CAA 90 bp | GTCAGCCAACATTGCAGCACAGTTGAAGCAATTCATCTTCTTAGTTACAGCTTAGGGCTCTGCTGTGTCTaGTTCTCTCTTCCCCTTAAT | + |
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Preference number: 3 (lower is better) Translates to: VSQHCSTVEAIHLLSYSLGLCCV*FSLPLN Trigger: ATTAAGGGGAAGAGAGAACAAGACACAGCAGAGCCC...TAAGCTGTAACTAAGAAGATGAATTGCTTCAACTGTGCTGCAATGTTGGCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| 3UTR GCA 72 bp | TCATTCCCTCACTGTGACAGAGTTGTCAGCCAACATTaGAGCACAGTTGAAGCAATTCATCTTCTTAGTTAC | + |
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Preference number: 3 (lower is better) Translates to: SFPHCDRVVSQH*STVEAIHLLSY Trigger: GTAACTAAGAAGATGAATTGCTTCAACTGTGCTGCAATGTTGGCTGACAACTCTGTCACAGTGAGGGAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| 3UTR GCA 72 bp | AGTCTCATGTTTCTTTTGTGGACTCAATTCATAATATaGATTAGTCAACCTCATTCCCTCACTGTGACAGAG | + |
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Preference number: 3 (lower is better) Translates to: SLMFLLWTQFII*ISQPHSLTVTE Trigger: CTCTGTCACAGTGAGGGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAAGAAACATGAGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR TCA 90 bp | CCGTGGTCCTCAGGTCTGCTGGCTGGCAGAGGGGCACCGCACTGCTGCTCTCCTGCCACCTTGGCTGGCTaGGCTGCAGGGGGAGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: PWSSGLLAGRGAPHCCSPATLAG*AAGGVG Trigger: CCCCACTCCCCCTGCAGCTCAGCCAGCCAAGGTGGC...AGGAGAGCAGCAGTGCGGTGCCCCTCTGCCAGCCAGCAGACCTGAGGACCACGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR GCA 90 bp | GGTCCTCAGGTCTGCTGGCTGGCAGAGGGGCACCGCACTGCTGCTCTCCTGAGAGTTCTGCTGCGGCGGTaGCAGGCCGGAGACAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GPQVCWLAEGHRTAALLRVLLRR*QAGDSS Trigger: GGAGCTGTCTCCGGCCTGGCACCGCCGCAGCAGAAC...TCTCAGGAGAGCAGCAGTGCGGTGCCCCTCTGCCAGCCAGCAGACCTGAGGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CCA 90 bp | CCGTGGTCCTCAGGTCTGCTGGCTGGCAGAGGGGCACCGCACTGCTGCTCTCCTGATTCGGATCTTCTCTaGACTGCAGAAGTCCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: PWSSGLLAGRGAPHCCSPDSDLL*TAEVLP Trigger: GGGCAGGACTTCTGCAGTCCAGAGAAGATCCGAATC...AGGAGAGCAGCAGTGCGGTGCCCCTCTGCCAGCCAGCAGACCTGAGGACCACGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CCA 90 bp | GGTCCTCAGGTCTGCTGGCTGGCAGAGGGGCACCGCACTGCTGCTCTCCTGAGAAAACATCTGCCCATATaGCTCACTGGCAGGCAGCGA | + |
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Preference number: 4 (lower is better) Translates to: GPQVCWLAEGHRTAALLRKHLPI*LTGRQR Trigger: TCGCTGCCTGCCAGTGAGCCATATGGGCAGATGTTT...TCTCAGGAGAGCAGCAGTGCGGTGCCCCTCTGCCAGCCAGCAGACCTGAGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CCA 90 bp | GGTCCTCAGGTCTGCTGGCTGGCAGAGGGGCACCGCACTGCTGCTCTCCTGAGACCCAACTGGGTGACTTaGAGCAGGTGGCATTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: GPQVCWLAEGHRTAALLRPNWVT*SRWHSC Trigger: ACAAGAATGCCACCTGCTCCAAGTCACCCAGTTGGG...TCTCAGGAGAGCAGCAGTGCGGTGCCCCTCTGCCAGCCAGCAGACCTGAGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR TCA 90 bp | CCGTGGTCCTCAGGTCTGCTGGCTGGCAGAGGGGCACCGCACTGCTGCTCTCCTCCTCACGATGGTGTTTaGGGTTATCACTGGCAATTG | + |
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Preference number: 4 (lower is better) Translates to: PWSSGLLAGRGAPHCCSPPHDGV*GYHWQL Trigger: CAATTGCCAGTGATAACCTCAAACACCATCGTGAGG...AGGAGAGCAGCAGTGCGGTGCCCCTCTGCCAGCCAGCAGACCTGAGGACCACGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR TCA 90 bp | GGTCCTCAGGTCTGCTGGCTGGCAGAGGGGCACCGCACTGCTGCTCTCCTGAGATTGGTACTCGACCTCTaGTTCGGATCTTCTCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: GPQVCWLAEGHRTAALLRLVLDL*FGSSLD Trigger: GTCCAGAGAAGATCCGAATCAGAGGTCGAGTACCAA...TCTCAGGAGAGCAGCAGTGCGGTGCCCCTCTGCCAGCCAGCAGACCTGAGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CCA 90 bp | GCCTCAGCGTCCTTGGAGGGGCTCTGCTGTGTCTTGTTCTCTCTTCCCCTTAATGAGCTGCAGGGGGAGTaGGGGCTGCAGACAGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: ASASLEGLCCVLFSLPLNELQGE*GLQTEP Trigger: AGGCTCTGTCTGCAGCCCCCACTCCCCCTGCAGCTC...ATTAAGGGGAAGAGAGAACAAGACACAGCAGAGCCCCTCCAAGGACGCTGAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CCA 90 bp | CTGTCTGCTGCCTCAGCGTCCTTGGAGGGGCTCTGCTGTGTCTTGTTCTCTCTTCGGATGAGGCTGTCTTaGGCTGGTGGAAGGGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: LSAASASLEGLCCVLFSLRMRLS*AGGRAG Trigger: TCCAGCCCTTCCACCAGCCCAAGACAGCCTCATCCG...AAGAGAGAACAAGACACAGCAGAGCCCCTCCAAGGACGCTGAGGCAGCAGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CCA 90 bp | CTGTCTGCTGCCTCAGCGTCCTTGGAGGGGCTCTGCTGTGTCTTGTTCTCTCTTGATGTGCTGCGGGCATaGGTGGTGGTGCTGCGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LSAASASLEGLCCVLFSLDVLRA*VVVLRS Trigger: AGAACGCAGCACCACCACCCATGCCCGCAGCACATC...AAGAGAGAACAAGACACAGCAGAGCCCCTCCAAGGACGCTGAGGCAGCAGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CCA 90 bp | CTGTCTGCTGCCTCAGCGTCCTTGGAGGGGCTCTGCTGTGTCTTGTTCTCTCTTGGTCCACAGCCATGTTaGCGAGAAGGCAGACAGCGG | + |
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Preference number: 4 (lower is better) Translates to: LSAASASLEGLCCVLFSLGPQPC*REGRQR Trigger: CCGCTGTCTGCCTTCTCGCCAACATGGCTGTGGACC...AAGAGAGAACAAGACACAGCAGAGCCCCTCCAAGGACGCTGAGGCAGCAGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CCA 90 bp | CTGTCTGCTGCCTCAGCGTCCTTGGAGGGGCTCTGCTGTGTCTTGTTCTCTCTTTTGGTGCTGTCAGGGTaGAGCGGGGCACACTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: LSAASASLEGLCCVLFSLLVLSG*SGAHLP Trigger: TGGCAAGTGTGCCCCGCTCCACCCTGACAGCACCAA...AAGAGAGAACAAGACACAGCAGAGCCCCTCCAAGGACGCTGAGGCAGCAGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR GCA 90 bp | GACATGTCATTCCGTGGTCCTCAGGTCTGCTGGCTGGCAGAGGGGCACCGCACTGGTCAGGAACAGGGCTaGTTGCTGAAGAAGAATGCA | + |
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Preference number: 4 (lower is better) Translates to: DMSFRGPQVCWLAEGHRTGQEQG*LLKKNA Trigger: TGCATTCTTCTTCAGCAAGCAGCCCTGTTCCTGACC...AGTGCGGTGCCCCTCTGCCAGCCAGCAGACCTGAGGACCACGGAATGACATGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR GCA 90 bp | CTGTCTGCTGCCTCAGCGTCCTTGGAGGGGCTCTGCTGTGTCTTGTTCTCTCTTCATGGGTGGTGGTGCTaGGTTCTGATAGGCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LSAASASLEGLCCVLFSLHGWWC*VLIGRL Trigger: CAGCCTGCCTATCAGAACGCAGCACCACCACCCATG...AAGAGAGAACAAGACACAGCAGAGCCCCTCCAAGGACGCTGAGGCAGCAGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR GCA 90 bp | TGTTCTCTCTTCCCCTTAATCTCTGGCCCAAGCCTCAGAGTGATGTGCATCGTTGCCGCTGGGATGTGCTaGGGGCATGGGTGGTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: CSLFPLISGPSLRVMCIVAAGMC*GHGWWC Trigger: GCACCACCACCCATGCCCGCAGCACATCCCAGCGGC...AACGATGCACATCACTCTGAGGCTTGGGCCAGAGATTAAGGGGAAGAGAGAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR GCA 90 bp | GACTCTGTCTGCTGCCTCAGCGTCCTTGGAGGGGCTCTGCTGTGTCTTGTTCTCGGATCTTCTCTGGACTaGAGAAGTCCTGCCCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: DSVCCLSVLGGALLCLVLGSSLD*RSPAPK Trigger: CTTGGGGGCAGGACTTCTGCAGTCCAGAGAAGATCC...GAGAACAAGACACAGCAGAGCCCCTCCAAGGACGCTGAGGCAGCAGACAGAGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CCA 90 bp | CGCTGCCCTTCGGCATCTCTCATCAGAGTTCAAGTCCAGAATGCTAACTGTACGGAGCCTGGGCGAGGGTaGGACTGGGTTCCAGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: RCPSASLIRVQVQNANCTEPGRG*DWVPGH Trigger: ATGCCCTGGAACCCAGTCCCACCCTCGCCCAGGCTC...CGTACAGTTAGCATTCTGGACTTGAACTCTGATGAGAGATGCCGAAGGGCAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR TCA 90 bp | GGTCCTCAGGTCTGCTGGCTGGCAGAGGGGCACCGCACTGCTGCTCTCCTGAGACATTTTCTGTGGTATTaGTGCAAAGTCAGGGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: GPQVCWLAEGHRTAALLRHFLWY*CKVRVS Trigger: GGATACCCTGACTTTGCATCAATACCACAGAAAATG...TCTCAGGAGAGCAGCAGTGCGGTGCCCCTCTGCCAGCCAGCAGACCTGAGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR CCA 90 bp | TGTTCTCTCTTCCCCTTAATCTCTGGCCCAAGCCTCAGAGTGATGTGCATCGTTGGGCGAGGGTGGGACTaGGTTCCAGGGCATGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CSLFPLISGPSLRVMCIVGRGWD*VPGHGQ Trigger: CTGACCATGCCCTGGAACCCAGTCCCACCCTCGCCC...AACGATGCACATCACTCTGAGGCTTGGGCCAGAGATTAAGGGGAAGAGAGAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| 3UTR CAA 72 bp | ACGCAAAAACCGACTCTGTCTGCTGCCTCAGCGTCCTaGGAGGGGCTCTGCTGTGTCTTGTTCTCTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TQKPTLSAASAS*EGLCCVLFSLP Trigger: GGGAAGAGAGAACAAGACACAGCAGAGCCCCTCCAAGGACGCTGAGGCAGCAGACAGAGTCGGTTTTTGCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR GCA 90 bp | GGTCCTCAGGTCTGCTGGCTGGCAGAGGGGCACCGCACTGCTGCTCTCCTGAGACTCTATAACACAGGTTaGATTTCCATCTTCGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GPQVCWLAEGHRTAALLRLYNTG*ISIFAD Trigger: ATCAGCGAAGATGGAAATGCAACCTGTGTTATAGAG...TCTCAGGAGAGCAGCAGTGCGGTGCCCCTCTGCCAGCCAGCAGACCTGAGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR CCA 90 bp | CTGTCTGCTGCCTCAGCGTCCTTGGAGGGGCTCTGCTGTGTCTTGTTCTCTCTTAAGCACTGCTGGTGGTaGAAGAGCTGTCAACACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSAASASLEGLCCVLFSLKHCWW*KSCQHL Trigger: CAGGTGTTGACAGCTCTTCCACCACCAGCAGTGCTT...AAGAGAGAACAAGACACAGCAGAGCCCCTCCAAGGACGCTGAGGCAGCAGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CCA 90 bp | GACTCTGTCTGCTGCCTCAGCGTCCTTGGAGGGGCTCTGCTGTGTCTTGTTCTCACCGGCACCTCACGATaGTGTTTGAGGTTATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: DSVCCLSVLGGALLCLVLTGTSR*CLRLSL Trigger: CAGTGATAACCTCAAACACCATCGTGAGGTGCCGGT...GAGAACAAGACACAGCAGAGCCCCTCCAAGGACGCTGAGGCAGCAGACAGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR CCA 90 bp | ACAAGCGAGTACCACAGTGCCGCTGCCCTTCGGCATCTCTCATCAGAGTTCAAGGTTGCAGGGCCAAGATaGTGCACCACCTTGGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: TSEYHSAAALRHLSSEFKVAGPR*CTTLVL Trigger: GAGTACCAAGGTGGTGCACCATCTTGGCCCTGCAAC...CTTGAACTCTGATGAGAGATGCCGAAGGGCAGCGGCACTGTGGTACTCGCTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CCA 90 bp | GACTCTGTCTGCTGCCTCAGCGTCCTTGGAGGGGCTCTGCTGTGTCTTGTTCTCACCCTGCAGAGTACTTaGACATGCAAGCCAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DSVCCLSVLGGALLCLVLTLQST*TCKPEK Trigger: CTTCTCTGGCTTGCATGTCCAAGTACTCTGCAGGGT...GAGAACAAGACACAGCAGAGCCCCTCCAAGGACGCTGAGGCAGCAGACAGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR CCA 90 bp | GACTCTGTCTGCTGCCTCAGCGTCCTTGGAGGGGCTCTGCTGTGTCTTGTTCTCGAGACAGTAAGTCGGTaGAGCGGACAAAGAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DSVCCLSVLGGALLCLVLETVSR*SGQRSS Trigger: GGAACTTCTTTGTCCGCTCCACCGACTTACTGTCTC...GAGAACAAGACACAGCAGAGCCCCTCCAAGGACGCTGAGGCAGCAGACAGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR TCA 90 bp | CGCTGCCCTTCGGCATCTCTCATCAGAGTTCAAGTCCAGAATGCTAACTGTACGACAGGCCCAACTGGGTaGCTTGGAGCAGGTGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: RCPSASLIRVQVQNANCTTGPTG*LGAGGI Trigger: AATGCCACCTGCTCCAAGTCACCCAGTTGGGCCTGT...CGTACAGTTAGCATTCTGGACTTGAACTCTGATGAGAGATGCCGAAGGGCAGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR TCA 90 bp | GACTCTGTCTGCTGCCTCAGCGTCCTTGGAGGGGCTCTGCTGTGTCTTGTTCTCAACAGGGCTGCTTGCTaGAGAAGAATGCATATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DSVCCLSVLGGALLCLVLNRAAC*RRMHIW Trigger: CCAGATATGCATTCTTCTTCAGCAAGCAGCCCTGTT...GAGAACAAGACACAGCAGAGCCCCTCCAAGGACGCTGAGGCAGCAGACAGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR GCA 90 bp | GACATGTCATTCCGTGGTCCTCAGGTCTGCTGGCTGGCAGAGGGGCACCGCACTAAATCCACTGCAGTTTaGTGCCCTGAGCAATCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: DMSFRGPQVCWLAEGHRTKSTAV*CPEQSK Trigger: TTTAGATTGCTCAGGGCAGCAAACTGCAGTGGATTT...AGTGCGGTGCCCCTCTGCCAGCCAGCAGACCTGAGGACCACGGAATGACATGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR GCA 90 bp | GACTCTGTCTGCTGCCTCAGCGTCCTTGGAGGGGCTCTGCTGTGTCTTGTTCTCCAGAGTACTTGGACATaGAAGCCAGAGAAGCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: DSVCCLSVLGGALLCLVLQSTWT*KPEKQG Trigger: ACCTTGCTTCTCTGGCTTGCATGTCCAAGTACTCTG...GAGAACAAGACACAGCAGAGCCCCTCCAAGGACGCTGAGGCAGCAGACAGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR GCA 90 bp | GACTCTGTCTGCTGCCTCAGCGTCCTTGGAGGGGCTCTGCTGTGTCTTGTTCTCTTCCCGTGGAAAGTGTaGATTGAGAGCCCTTTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: DSVCCLSVLGGALLCLVLFPWKV*IESPLV Trigger: CACTAAAGGGCTCTCAATGCACACTTTCCACGGGAA...GAGAACAAGACACAGCAGAGCCCCTCCAAGGACGCTGAGGCAGCAGACAGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR TCA 90 bp | ACAAGCGAGTACCACAGTGCCGCTGCCCTTCGGCATCTCTCATCAGAGTTCAAGGAACTATATCCTGAATaGCTCTGCTGCTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TSEYHSAAALRHLSSEFKELYPE*LCCCCC Trigger: GCAGCAGCAGCAGCAGAGTCATTCAGGATATAGTTC...CTTGAACTCTGATGAGAGATGCCGAAGGGCAGCGGCACTGTGGTACTCGCTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR GCA 90 bp | CCAATCTTTATAGTAAACAGCCTGCTGGGAACGACAGAATTCCTGATCAGAACACTTGGCTGGCTGAGCTaGAGGGGGAGTGGGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PIFIVNSLLGTTEFLIRTLGWLS*RGSGGC Trigger: GCAGCCCCCACTCCCCCTGCAGCTCAGCCAGCCAAG...TGTTCTGATCAGGAATTCTGTCGTTCCCAGCAGGCTGTTTACTATAAAGATTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CCA 90 bp | CTGTCTGCTGCCTCAGCGTCCTTGGAGGGGCTCTGCTGTGTCTTGTTCTCTCTTACACTGGCTATCCAATaGCAAGGAGGTCATTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSAASASLEGLCCVLFSLTLAIQ*QGGHFP Trigger: GGGAAAATGACCTCCTTGCCATTGGATAGCCAGTGT...AAGAGAGAACAAGACACAGCAGAGCCCCTCCAAGGACGCTGAGGCAGCAGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR CCA 90 bp | TTCCTGTTAAGAAGTAATTCATACAAGCGAGTACCACAGTGCCGCTGCCCTTCGCTGGTGCTGAGAAGGTaGAGGTGGAGGTCTCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLLRSNSYKRVPQCRCPSLVLRR*RWRSRG Trigger: CCCTCGAGACCTCCACCTCCACCTTCTCAGCACCAG...CGAAGGGCAGCGGCACTGTGGTACTCGCTTGTATGAATTACTTCTTAACAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CCA 90 bp | TTCCTGTTAAGAAGTAATTCATACAAGCGAGTACCACAGTGCCGCTGCCCTTCGAAGGCTTTGCCACCTTaGCTGGCTGAGCTGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLLRSNSYKRVPQCRCPSKALPP*LAELQG Trigger: CCCCTGCAGCTCAGCCAGCCAAGGTGGCAAAGCCTT...CGAAGGGCAGCGGCACTGTGGTACTCGCTTGTATGAATTACTTCTTAACAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR TCA 90 bp | TGTTCTCTCTTCCCCTTAATCTCTGGCCCAAGCCTCAGAGTGATGTGCATCGTTTGGGAGCAGCTTAAGTaGGCTTGGTGCTGTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CSLFPLISGPSLRVMCIVWEQLK*AWCCQG Trigger: ACCCTGACAGCACCAAGCTCACTTAAGCTGCTCCCA...AACGATGCACATCACTCTGAGGCTTGGGCCAGAGATTAAGGGGAAGAGAGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR TCA 90 bp | TGTGACAGAGTTGTCAGCCAACATTGCAGCACAGTTGAAGCAATTCATCTTCTTCTGAGCCGCAGTCCATaGGGAAAGCGCCTTCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: CDRVVSQHCSTVEAIHLLLSRSP*GKRLLG Trigger: CCCGAGAAGGCGCTTTCCTCATGGACTGCGGCTCAG...AAGAAGATGAATTGCTTCAACTGTGCTGCAATGTTGGCTGACAACTCTGTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR GCA 90 bp | GCCTCAGCGTCCTTGGAGGGGCTCTGCTGTGTCTTGTTCTCTCTTCCCCTTAATGATACAATCAACATCTaGGGCTGGGATAACCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASASLEGLCCVLFSLPLNDTINI*GWDNPS Trigger: AGAAGGGTTATCCCAGCCGCAGATGTTGATTGTATC...ATTAAGGGGAAGAGAGAACAAGACACAGCAGAGCCCCTCCAAGGACGCTGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR GCA 90 bp | CTGTCTGCTGCCTCAGCGTCCTTGGAGGGGCTCTGCTGTGTCTTGTTCTCTCTTATGGATAGTAGAATATaGACCCTGCAGAGTACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSAASASLEGLCCVLFSLMDSRI*TLQSTW Trigger: CCAAGTACTCTGCAGGGTGCATATTCTACTATCCAT...AAGAGAGAACAAGACACAGCAGAGCCCCTCCAAGGACGCTGAGGCAGCAGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR GCA 90 bp | TGTTCTCTCTTCCCCTTAATCTCTGGCCCAAGCCTCAGAGTGATGTGCATCGTTGGCAAGCACAGTGTATaGACTCGAATTCTCCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: CSLFPLISGPSLRVMCIVGKHSV*TRILRS Trigger: CGAGCGGAGAATTCGAGTGCATACACTGTGCTTGCC...AACGATGCACATCACTCTGAGGCTTGGGCCAGAGATTAAGGGGAAGAGAGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR GCA 90 bp | ACAAGCGAGTACCACAGTGCCGCTGCCCTTCGGCATCTCTCATCAGAGTTCAAGATCATTTTCATGAGATaGACAAGCGGCTGCGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: TSEYHSAAALRHLSSEFKIIFMR*TSGCDF Trigger: GAAGTCGCAGCCGCTTGTGCATCTCATGAAAATGAT...CTTGAACTCTGATGAGAGATGCCGAAGGGCAGCGGCACTGTGGTACTCGCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR GCA 90 bp | ATTCATTCACTAATGAATGAGACTTGGTATTGCATCTTCTCCAAGCGGCAAATTTGGGCCGCTGGGATGTaGTGCGGGCATGGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IHSLMNETWYCIFSKRQIWAAGM*CGHGWW Trigger: CCACCACCCATGCCCGCAGCACATCCCAGCGGCCCA...AATTTGCCGCTTGGAGAAGATGCAATACCAAGTCTCATTCATTAGTGAATGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CCA 90 bp | CGCTGCCCTTCGGCATCTCTCATCAGAGTTCAAGTCCAGAATGCTAACTGTACGAGTAAAGCCTGTGTCTaGGGGATACTGGTCAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RCPSASLIRVQVQNANCTSKACV*GILVKV Trigger: TACCTTGACCAGTATCCCCCAGACACAGGCTTTACT...CGTACAGTTAGCATTCTGGACTTGAACTCTGATGAGAGATGCCGAAGGGCAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CCA 90 bp | CGCTGCCCTTCGGCATCTCTCATCAGAGTTCAAGTCCAGAATGCTAACTGTACGAGAATTCTGGACTTCTaGCCGTTTATGAGGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RCPSASLIRVQVQNANCTRILDF*PFMRLS Trigger: GGAGAGCCTCATAAACGGCCAGAAGTCCAGAATTCT...CGTACAGTTAGCATTCTGGACTTGAACTCTGATGAGAGATGCCGAAGGGCAGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CCA 90 bp | GACTCTGTCTGCTGCCTCAGCGTCCTTGGAGGGGCTCTGCTGTGTCTTGTTCTCTCTTCAAGCAAATGCTaGAAAAAGTCTGTTTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DSVCCLSVLGGALLCLVLSSSKC*KKSVLA Trigger: TGCCAAAACAGACTTTTTCCAGCATTTGCTTGAAGA...GAGAACAAGACACAGCAGAGCCCCTCCAAGGACGCTGAGGCAGCAGACAGAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR TCA 90 bp | TTCCTGTTAAGAAGTAATTCATACAAGCGAGTACCACAGTGCCGCTGCCCTTCGGGATACTACGGAGCTTaGCTTGGGAGGTTGGACATT | + |
|
Preference number: 4 (lower is better) Translates to: FLLRSNSYKRVPQCRCPSGYYGA*LGRLDI Trigger: AATGTCCAACCTCCCAAGTCAAGCTCCGTAGTATCC...CGAAGGGCAGCGGCACTGTGGTACTCGCTTGTATGAATTACTTCTTAACAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CCA 90 bp | TGTGACAGAGTTGTCAGCCAACATTGCAGCACAGTTGAAGCAATTCATCTTCTTCTGAGAAGGTGGAGGTaGAGGTCTCGAGGGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CDRVVSQHCSTVEAIHLLLRRWR*RSRGVG Trigger: ACCTACCCCTCGAGACCTCCACCTCCACCTTCTCAG...AAGAAGATGAATTGCTTCAACTGTGCTGCAATGTTGGCTGACAACTCTGTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CCA 90 bp | CGCTGCCCTTCGGCATCTCTCATCAGAGTTCAAGTCCAGAATGCTAACTGTACGAGAAGAATGCATATCTaGGTAGCTGCCTCCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RCPSASLIRVQVQNANCTRRMHI*VAASFQ Trigger: TTGGAAGGAGGCAGCTACCCAGATATGCATTCTTCT...CGTACAGTTAGCATTCTGGACTTGAACTCTGATGAGAGATGCCGAAGGGCAGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CCA 90 bp | ATTCATTCACTAATGAATGAGACTTGGTATTGCATCTTCTCCAAGCGGCAAATTGCTGCAGACAGAGCCTaGGCGAGGGTGGGACTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: IHSLMNETWYCIFSKRQIAADRA*ARVGLG Trigger: ACCCAGTCCCACCCTCGCCCAGGCTCTGTCTGCAGC...AATTTGCCGCTTGGAGAAGATGCAATACCAAGTCTCATTCATTAGTGAATGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CCA 90 bp | ATCATCACCAATCTTTATAGTAAACAGCCTGCTGGGAACGACAGAATTCCTGATCTTTGCCACCTTGGCTaGCTGAGCTGCAGGGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: IITNLYSKQPAGNDRIPDLCHLG*LSCRGS Trigger: ACTCCCCCTGCAGCTCAGCCAGCCAAGGTGGCAAAG...ATCAGGAATTCTGTCGTTCCCAGCAGGCTGTTTACTATAAAGATTGGTGATGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CCA 90 bp | GTCAGCCAACATTGCAGCACAGTTGAAGCAATTCATCTTCTTAGTTACAGCTTATCACCAGGGCATCCCTaGCATCCGACAGGCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: VSQHCSTVEAIHLLSYSLSPGHP*HPTGSM Trigger: CATCGAGCCTGTCGGATGCCAGGGATGCCCTGGTGA...TAAGCTGTAACTAAGAAGATGAATTGCTTCAACTGTGCTGCAATGTTGGCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR TCA 90 bp | TTCCTGTTAAGAAGTAATTCATACAAGCGAGTACCACAGTGCCGCTGCCCTTCGACCCAGCATCAGGATTaGTGTTGGCAAGAGACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FLLRSNSYKRVPQCRCPSTQHQD*CWQETV Trigger: TACTGTCTCTTGCCAACATCAATCCTGATGCTGGGT...CGAAGGGCAGCGGCACTGTGGTACTCGCTTGTATGAATTACTTCTTAACAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR GCA 90 bp | GTCAGCCAACATTGCAGCACAGTTGAAGCAATTCATCTTCTTAGTTACAGCTTAGAAGGCAGCCTGAAGTaGAGGTCCAAGGGCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VSQHCSTVEAIHLLSYSLEGSLK*RSKGTV Trigger: CACAGTGCCCTTGGACCTGCACTTCAGGCTGCCTTC...TAAGCTGTAACTAAGAAGATGAATTGCTTCAACTGTGCTGCAATGTTGGCTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR CCA 90 bp | GCCTCAGCGTCCTTGGAGGGGCTCTGCTGTGTCTTGTTCTCTCTTCCCCTTAATTGTTGGTACTGTATATaGACGAGAGTAGTAACTATC | + |
|
Preference number: 4 (lower is better) Translates to: ASASLEGLCCVLFSLPLNCWYCI*TRVVTI Trigger: GATAGTTACTACTCTCGTCCATATACAGTACCAACA...ATTAAGGGGAAGAGAGAACAAGACACAGCAGAGCCCCTCCAAGGACGCTGAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR CCA 90 bp | ATTCATTCACTAATGAATGAGACTTGGTATTGCATCTTCTCCAAGCGGCAAATTGGGCACAGGCCCAACTaGGTGACTTGGAGCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IHSLMNETWYCIFSKRQIGHRPN*VTWSRW Trigger: CCACCTGCTCCAAGTCACCCAGTTGGGCCTGTGCCC...AATTTGCCGCTTGGAGAAGATGCAATACCAAGTCTCATTCATTAGTGAATGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR CCA 90 bp | CCAATCTTTATAGTAAACAGCCTGCTGGGAACGACAGAATTCCTGATCAGAACAGCGAAGCACTGCTGGTaGTGGAAGAGCTGTCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: PIFIVNSLLGTTEFLIRTAKHCW*WKSCQH Trigger: GTGTTGACAGCTCTTCCACCACCAGCAGTGCTTCGC...TGTTCTGATCAGGAATTCTGTCGTTCCCAGCAGGCTGTTTACTATAAAGATTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR CCA 90 bp | TTGTCAGCCAACATTGCAGCACAGTTGAAGCAATTCATCTTCTTAGTTACAGCTGGCAGGCTGCAGAGCTaGGTAGCCATAGCCAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSANIAAQLKQFIFLVTAGRLQS*VAIAKR Trigger: CCTTTTGGCTATGGCTACCCAGCTCTGCAGCCTGCC...AGCTGTAACTAAGAAGATGAATTGCTTCAACTGTGCTGCAATGTTGGCTGACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR CCA 90 bp | GTCTTGTTCTCTCTTCCCCTTAATCTCTGGCCCAAGCCTCAGAGTGATGTGCATACAAAGAAGTTCCCGTaGAAAGTGTGCATTGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLFSLPLNLWPKPQSDVHTKKFP*KVCIES Trigger: GCTCTCAATGCACACTTTCCACGGGAACTTCTTTGT...ATGCACATCACTCTGAGGCTTGGGCCAGAGATTAAGGGGAAGAGAGAACAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR TCA 90 bp | TGGACTCAATTCATAATATGCATTAGTCAACCTCATTCCCTCACTGTGACAGAGCCATTTGGTTTCGGATaGGGCTGTCTTGGGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: WTQFIICISQPHSLTVTEPFGFG*GCLGLV Trigger: CACCAGCCCAAGACAGCCTCATCCGAAACCAAATGG...CTCTGTCACAGTGAGGGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR CCA 90 bp | TGTTCTCTCTTCCCCTTAATCTCTGGCCCAAGCCTCAGAGTGATGTGCATCGTTCCCCGAATTTTGTGTTaGTACTGTATATGGACGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CSLFPLISGPSLRVMCIVPRILC*YCIWTR Trigger: TCTCGTCCATATACAGTACCAACACAAAATTCGGGG...AACGATGCACATCACTCTGAGGCTTGGGCCAGAGATTAAGGGGAAGAGAGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR CCA 90 bp | ACAAGCGAGTACCACAGTGCCGCTGCCCTTCGGCATCTCTCATCAGAGTTCAAGCTTGACTTGGGAGGTTaGACATTTTCATTATTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TSEYHSAAALRHLSSEFKLDLGG*TFSLLV Trigger: AACTAATAATGAAAATGTCCAACCTCCCAAGTCAAG...CTTGAACTCTGATGAGAGATGCCGAAGGGCAGCGGCACTGTGGTACTCGCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR CCA 90 bp | TTGTCAGCCAACATTGCAGCACAGTTGAAGCAATTCATCTTCTTAGTTACAGCTAGGGCGAAGCACTGCTaGTGGTGGAAGAGCTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSANIAAQLKQFIFLVTARAKHC*WWKSCQ Trigger: TTGACAGCTCTTCCACCACCAGCAGTGCTTCGCCCT...AGCTGTAACTAAGAAGATGAATTGCTTCAACTGTGCTGCAATGTTGGCTGACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR TCA 90 bp | TGGACTCAATTCATAATATGCATTAGTCAACCTCATTCCCTCACTGTGACAGAGGAAGGTAACTGTGTCTaGAATACAGACACGCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: WTQFIICISQPHSLTVTEEGNCV*NTDTRP Trigger: CGGCCGCGTGTCTGTATTTCAGACACAGTTACCTTC...CTCTGTCACAGTGAGGGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR GCA 90 bp | AATGGATCATCACCAATCTTTATAGTAAACAGCCTGCTGGGAACGACAGAATTCAGAGCTGTCAACACCTaGTTCCTCATCCTCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NGSSPIFIVNSLLGTTEFRAVNT*FLILLL Trigger: CAGGAGGAGGATGAGGAAGCAGGTGTTGACAGCTCT...GAATTCTGTCGTTCCCAGCAGGCTGTTTACTATAAAGATTGGTGATGATCCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| 3UTR CAA 72 bp | TGCATTAGTCAACCTCATTCCCTCACTGTGACAGAGTaGTCAGCCAACATTGCAGCACAGTTGAAGCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: CISQPHSLTVTE*SANIAAQLKQF Trigger: GAATTGCTTCAACTGTGCTGCAATGTTGGCTGACAACTCTGTCACAGTGAGGGAATGAGGTTGACTAATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR TCA 90 bp | TTCCTGTTAAGAAGTAATTCATACAAGCGAGTACCACAGTGCCGCTGCCCTTCGCATTTCCATCTTCGCTaGTCAATGAAGGACACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FLLRSNSYKRVPQCRCPSHFHLR*SMKDTK Trigger: TTTTGTGTCCTTCATTGATCAGCGAAGATGGAAATG...CGAAGGGCAGCGGCACTGTGGTACTCGCTTGTATGAATTACTTCTTAACAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR TCA 90 bp | ATCATCACCAATCTTTATAGTAAACAGCCTGCTGGGAACGACAGAATTCCTGATTACAGCAGGGCTGTCTaGAAGCACACTAAGGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: IITNLYSKQPAGNDRIPDYSRAV*KHTKAV Trigger: TACTGCCTTAGTGTGCTTTCAGACAGCCCTGCTGTA...ATCAGGAATTCTGTCGTTCCCAGCAGGCTGTTTACTATAAAGATTGGTGATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR GCA 90 bp | TATAGTAAACAGCCTGCTGGGAACGACAGAATTCCTGATCAGAACAAAAATCTCTCCACTGCAGTTTGCTaGCCTGAGCAATCTAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: YSKQPAGNDRIPDQNKNLSTAVC*PEQSKA Trigger: CGCTTTAGATTGCTCAGGGCAGCAAACTGCAGTGGA...GAGATTTTTGTTCTGATCAGGAATTCTGTCGTTCCCAGCAGGCTGTTTACTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR GCA 90 bp | TGTTCTCTCTTCCCCTTAATCTCTGGCCCAAGCCTCAGAGTGATGTGCATCGTTTGTCCCTGTTCTAAATaGTTTCTGTTTAAGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CSLFPLISGPSLRVMCIVCPCSK*FLFKKC Trigger: GCACTTCTTAAACAGAAAGCATTTAGAACAGGGACA...AACGATGCACATCACTCTGAGGCTTGGGCCAGAGATTAAGGGGAAGAGAGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR CCA 90 bp | ATTCATTCACTAATGAATGAGACTTGGTATTGCATCTTCTCCAAGCGGCAAATTTGCTGTGCTCCTGGTTaGTTTGCTGAGCTGGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: IHSLMNETWYCIFSKRQICCAPG*FAELGV Trigger: GACTCCCAGCTCAGCAAACCAACCAGGAGCACAGCA...AATTTGCCGCTTGGAGAAGATGCAATACCAAGTCTCATTCATTAGTGAATGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR CCA 90 bp | TTCCTGTTAAGAAGTAATTCATACAAGCGAGTACCACAGTGCCGCTGCCCTTCGATTTTCATTATTAGTTaGGTGGCTGTTCGCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLLRSNSYKRVPQCRCPSIFIIS*VAVRCS Trigger: GCTACAGCGAACAGCCACCCAACTAATAATGAAAAT...CGAAGGGCAGCGGCACTGTGGTACTCGCTTGTATGAATTACTTCTTAACAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR CCA 90 bp | TGGACTCAATTCATAATATGCATTAGTCAACCTCATTCCCTCACTGTGACAGAGGCAGACTATCCGGCGTaGGCAGAAAAACATCGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: WTQFIICISQPHSLTVTEADYPA*AEKHRL Trigger: TAGACGATGTTTTTCTGCCCACGCCGGATAGTCTGC...CTCTGTCACAGTGAGGGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR TCA 90 bp | TTGTCAGCCAACATTGCAGCACAGTTGAAGCAATTCATCTTCTTAGTTACAGCTGTAGAGGGATATCCCTaGGAAGCAACAGAAGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LSANIAAQLKQFIFLVTAVEGYP*EATEAL Trigger: CAATGCTTCTGTTGCTTCTCAGGGATATCCCTCTAC...AGCTGTAACTAAGAAGATGAATTGCTTCAACTGTGCTGCAATGTTGGCTGACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR TCA 90 bp | GTCAGCCAACATTGCAGCACAGTTGAAGCAATTCATCTTCTTAGTTACAGCTTAGATGAATCATTTTCATaGGATGCACAAGCGGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: VSQHCSTVEAIHLLSYSLDESFS*DAQAAA Trigger: CGCAGCCGCTTGTGCATCTCATGAAAATGATTCATC...TAAGCTGTAACTAAGAAGATGAATTGCTTCAACTGTGCTGCAATGTTGGCTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR GCA 90 bp | TATAGTAAACAGCCTGCTGGGAACGACAGAATTCCTGATCAGAACAAAAATCTCGTTATCACTGGCAATTaGGTCAGGTCTCTGAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: YSKQPAGNDRIPDQNKNLVITGN*VRSLKG Trigger: TCCCTTCAGAGACCTGACGCAATTGCCAGTGATAAC...GAGATTTTTGTTCTGATCAGGAATTCTGTCGTTCCCAGCAGGCTGTTTACTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR GCA 90 bp | ATCATCACCAATCTTTATAGTAAACAGCCTGCTGGGAACGACAGAATTCCTGATCTTATAAAAGTCGGTTaGAGGGCCAAGATGGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: IITNLYSKQPAGNDRIPDLIKVG*RAKMVH Trigger: GTGCACCATCTTGGCCCTGCAACCGACTTTTATAAG...ATCAGGAATTCTGTCGTTCCCAGCAGGCTGTTTACTATAAAGATTGGTGATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR CCA 90 bp | TATAGTAAACAGCCTGCTGGGAACGACAGAATTCCTGATCAGAACAAAAATCTCAGATGGAACTTGCATTaGACTCTGTGCTGGACCGTT | + |
|
Preference number: 4 (lower is better) Translates to: YSKQPAGNDRIPDQNKNLRWNLH*TLCWTV Trigger: AACGGTCCAGCACAGAGTCCAATGCAAGTTCCATCT...GAGATTTTTGTTCTGATCAGGAATTCTGTCGTTCCCAGCAGGCTGTTTACTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR CCA 90 bp | TTGTCAGCCAACATTGCAGCACAGTTGAAGCAATTCATCTTCTTAGTTACAGCTGCTTGCGAAGGATTGTaGGTAGAGTGGAAAGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSANIAAQLKQFIFLVTAACEGL*VEWKDG Trigger: TCCATCTTTCCACTCTACCCACAATCCTTCGCAAGC...AGCTGTAACTAAGAAGATGAATTGCTTCAACTGTGCTGCAATGTTGGCTGACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR TCA 90 bp | TATAGTAAACAGCCTGCTGGGAACGACAGAATTCCTGATCAGAACAAAAATCTCTCCTATTCTTGTTCGTaGATCTCCAGGAAGCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YSKQPAGNDRIPDQNKNLSYSCS*ISRKLV Trigger: GACAAGCTTCCTGGAGATTCACGAACAAGAATAGGA...GAGATTTTTGTTCTGATCAGGAATTCTGTCGTTCCCAGCAGGCTGTTTACTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR TCA 90 bp | TATAGTAAACAGCCTGCTGGGAACGACAGAATTCCTGATCAGAACAAAAATCTCATCCAATCTTCCTCGTaGGGTACCGTTTTAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YSKQPAGNDRIPDQNKNLIQSSS*GTVLGL Trigger: AAGACCTAAAACGGTACCTCACGAGGAAGATTGGAT...GAGATTTTTGTTCTGATCAGGAATTCTGTCGTTCCCAGCAGGCTGTTTACTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR GCA 90 bp | TATAGTAAACAGCCTGCTGGGAACGACAGAATTCCTGATCAGAACAAAAATCTCAGGTCTCTGAAGGGATaGAACAGCAATCCTAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YSKQPAGNDRIPDQNKNLRSLKG*NSNPKG Trigger: TCCTTTAGGATTGCTGTTGCATCCCTTCAGAGACCT...GAGATTTTTGTTCTGATCAGGAATTCTGTCGTTCCCAGCAGGCTGTTTACTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR TCA 90 bp | TTGTCAGCCAACATTGCAGCACAGTTGAAGCAATTCATCTTCTTAGTTACAGCTGCTTCCACTGCGTTATaGGACACATCTAAAACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSANIAAQLKQFIFLVTAASTAL*DTSKTN Trigger: GTTTGTTTTAGATGTGTCTCATAACGCAGTGGAAGC...AGCTGTAACTAAGAAGATGAATTGCTTCAACTGTGCTGCAATGTTGGCTGACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR TCA 90 bp | CCAATCTTTATAGTAAACAGCCTGCTGGGAACGACAGAATTCCTGATCAGAACATGCTGTCAAAAGTCATaGATCCTATTCTTGTTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: PIFIVNSLLGTTEFLIRTCCQKS*ILFLFV Trigger: CACGAACAAGAATAGGATTCATGACTTTTGACAGCA...TGTTCTGATCAGGAATTCTGTCGTTCCCAGCAGGCTGTTTACTATAAAGATTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR CCA 90 bp | TTGTCAGCCAACATTGCAGCACAGTTGAAGCAATTCATCTTCTTAGTTACAGCTGGTAGAGTGGAAAGATaGATAGTAGAATATGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: LSANIAAQLKQFIFLVTAGRVER*IVEYAP Trigger: GGGTGCATATTCTACTATCCATCTTTCCACTCTACC...AGCTGTAACTAAGAAGATGAATTGCTTCAACTGTGCTGCAATGTTGGCTGACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR GCA 90 bp | ATTCATTCACTAATGAATGAGACTTGGTATTGCATCTTCTCCAAGCGGCAAATTGTAGAATATGCACCCTaGAGAGTACTTGGACATGCA | + |
|
Preference number: 4 (lower is better) Translates to: IHSLMNETWYCIFSKRQIVEYAP*RVLGHA Trigger: TGCATGTCCAAGTACTCTGCAGGGTGCATATTCTAC...AATTTGCCGCTTGGAGAAGATGCAATACCAAGTCTCATTCATTAGTGAATGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| 3UTR CAA 72 bp | ACTGTGACAGAGTTGTCAGCCAACATTGCAGCACAGTaGAAGCAATTCATCTTCTTAGTTACAGCTTACATT | + |
|
Preference number: 4 (lower is better) Translates to: TVTELSANIAAQ*KQFIFLVTAYI Trigger: AATGTAAGCTGTAACTAAGAAGATGAATTGCTTCAACTGTGCTGCAATGTTGGCTGACAACTCTGTCACAGT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR GCA 90 bp | GTCAGCCAACATTGCAGCACAGTTGAAGCAATTCATCTTCTTAGTTACAGCTTATTTCTGTTTAAGAAGTaGCAAAACATAGAGTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VSQHCSTVEAIHLLSYSLFLFKK*QNIEWE Trigger: CTCCCACTCTATGTTTTGGCACTTCTTAAACAGAAA...TAAGCTGTAACTAAGAAGATGAATTGCTTCAACTGTGCTGCAATGTTGGCTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CCA 90 bp | TATAGTAAACAGCCTGCTGGGAACGACAGAATTCCTGATCAGAACAAAAATCTCAAAATATTTTTCTCCTaGGTGAGGTTGACAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YSKQPAGNDRIPDQNKNLKIFFS*VRLTGL Trigger: AAGACCTGTCAACCTCACCCAGGAGAAAAATATTTT...GAGATTTTTGTTCTGATCAGGAATTCTGTCGTTCCCAGCAGGCTGTTTACTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR TCA 90 bp | ATTCATTCACTAATGAATGAGACTTGGTATTGCATCTTCTCCAAGCGGCAAATTTTGAGAGTAATGTCCTaGAGGGACCATATAGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: IHSLMNETWYCIFSKRQILRVMS*RDHIVL Trigger: CAAAACTATATGGTCCCTTCAGGACATTACTCTCAA...AATTTGCCGCTTGGAGAAGATGCAATACCAAGTCTCATTCATTAGTGAATGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| 3UTR CAA 72 bp | CGTGTAATGAAGCTCTATTGTCCTTACAGGGAAATGTaGAATTCATTTCATGAACATGAGTCGTTCCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RVMKLYCPYREM*NSFHEHESFLL Trigger: TAACAGGAACGACTCATGTTCATGAAATGAATTCAACATTTCCCTGTAAGGACAATAGAGCTTCATTACACG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS CCA 90 bp | CGTTCTGCTGCGGCGGTGCCAGGCCGGAGACAGCTCCGCCGAGCTTaGGCGGCATCCGGGCGCCGGCGGCCGGGTGAGGGGACCCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RSAAAVPGRRQLRRA*AASGRRRPGEGTRR Trigger: CCGCCGGGTCCCCTCACCCGGCCGCCGGCGCCCGGATGCCGCCCAAGCTCGGCGGAGCTGTCTCCGGCCTGGCACCGCCGCAGCAGAACG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR CAA 90 bp | CCGTGGTCCTCAGGTCTGCTGGCTGGCAGAGGGGCACCGCACTGCTGCTCTCCTTCGGATGAGGCTGTCTaGGGCTGGTGGAAGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PWSSGLLAGRGAPHCCSPSDEAV*GWWKGW Trigger: CCAGCCCTTCCACCAGCCCAAGACAGCCTCATCCGA...AGGAGAGCAGCAGTGCGGTGCCCCTCTGCCAGCCAGCAGACCTGAGGACCACGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS GCA 90 bp | AGTGTACGCTGGGCCGCTGGGATGTGCTGCGGGCATGGGTGGTGGTaGTGCGTTCTGATAGGCAGGCTGCAGAGCTGGGTAGCCATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SVRWAAGMCCGHGWW*CVLIGRLQSWVAIA Trigger: GGCTATGGCTACCCAGCTCTGCAGCCTGCCTATCAGAACGCAGCACCACCACCCATGCCCGCAGCACATCCCAGCGGCCCAGCGTACACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 ENSMUST00000168644.3 |
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| CDS CCA 90 bp | ATGAGGCAGCCCATACCCAGATGGAACTTGCATTGGACTCTGTGCTaGACCGTTCTGCTGCGGCGGTGCCAGGCCGGAGACAGCTCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: MRQPIPRWNLHWTLC*TVLLRRCQAGDSSA Trigger: GGCGGAGCTGTCTCCGGCCTGGCACCGCCGCAGCAGAACGGTCCAGCACAGAGTCCAATGCAAGTTCCATCTGGGTATGGGCTGCCTCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS CCA 90 bp | CTGCTGCTGCTGCTGCTGCTGCTGCTGGTGCTGAGAAGGTGGAGGTaGAGGTCTCGAGGGGTAGGTAAGAGCTGTGCTGGGGCCAGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: LLLLLLLLLVLRRWR*RSRGVGKSCAGARV Trigger: TACTCTGGCCCCAGCACAGCTCTTACCTACCCCTCGAGACCTCCACCTCCACCTTCTCAGCACCAGCAGCAGCAGCAGCAGCAGCAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000168644.3 |
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| CDS GCA 90 bp | TTGATGAGGCAGCCCATACCCAGATGGAACTTGCATTGGACTCTGTaGTGGACCGTTCTGCTGCGGCGGTGCCAGGCCGGAGACAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LMRQPIPRWNLHWTL*WTVLLRRCQAGDSS Trigger: GGAGCTGTCTCCGGCCTGGCACCGCCGCAGCAGAACGGTCCAGCACAGAGTCCAATGCAAGTTCCATCTGGGTATGGGCTGCCTCATCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS GCA 90 bp | TGGGTAATGCTGAGGATATCCAGTGTACGCTGGGCCGCTGGGATGTaGTGCGGGCATGGGTGGTGGTGCTGCGTTCTGATAGGCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WVMLRISSVRWAAGM*CGHGWWCCVLIGRL Trigger: CAGCCTGCCTATCAGAACGCAGCACCACCACCCATGCCCGCAGCACATCCCAGCGGCCCAGCGTACACTGGATATCCTCAGCATTACCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 ENSMUST00000168644.3 |
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| CDS CCA 90 bp | TGTAGGCAGACAGGGGATCCACCACAGCGTTCACCAGGGCATCCCTaGCATCCGACAGGCTCGATGACACTGAGCGGTCCACAGCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: CRQTGDPPQRSPGHP*HPTGSMTLSGPQPC Trigger: ACATGGCTGTGGACCGCTCAGTGTCATCGAGCCTGTCGGATGCCAGGGATGCCCTGGTGAACGCTGTGGTGGATCCCCTGTCTGCCTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR CAA 90 bp | GACATGTCATTCCGTGGTCCTCAGGTCTGCTGGCTGGCAGAGGGGCACCGCACTGCCCAACTGGGTGACTaGGAGCAGGTGGCATTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: DMSFRGPQVCWLAEGHRTAQLGD*EQVAFL Trigger: CAAGAATGCCACCTGCTCCAAGTCACCCAGTTGGGC...AGTGCGGTGCCCCTCTGCCAGCCAGCAGACCTGAGGACCACGGAATGACATGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS CCA 90 bp | AGCGCCTTCTCGGGTCAGCTTCTCTGCAGACAGCTTCTGAAGCGGTaGCTGAGGTACTACCCTGTCATTCACGTGGATGGCGCCCTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: SAFSGQLLCRQLLKR*LRYYPVIHVDGALV Trigger: GACGAGGGCGCCATCCACGTGAATGACAGGGTAGTACCTCAGCCACCGCTTCAGAAGCTGTCTGCAGAGAAGCTGACCCGAGAAGGCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS GCA 90 bp | GGGCGAGGGTGGGACTGGGTTCCAGGGCATGGTCAGGAACAGGGCTaGTTGCTGAAGAAGAATGCATATCTGGGTAGCTGCCTCCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GRGWDWVPGHGQEQG*LLKKNAYLGSCLLP Trigger: TGGAAGGAGGCAGCTACCCAGATATGCATTCTTCTTCAGCAAGCAGCCCTGTTCCTGACCATGCCCTGGAACCCAGTCCCACCCTCGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 ENSMUST00000168644.3 |
||
| CDS CCA 90 bp | GCTGGTGGTGGAAGAGCTGTCAACACCTTTATTTGCGAACTTCTCTaGGGGGCGTTCCCTCATCCGACCGATGCAAGCTCCCCACAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AGGGRAVNTFICELL*GAFPHPTDASSPQS Trigger: GGACTGTGGGGAGCTTGCATCGGTCGGATGAGGGAACGCCCCCCAGAGAAGTTCGCAAATAAAGGTGTTGACAGCTCTTCCACCACCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168644.3 |
||
| CDS TCA 90 bp | ACAGACACGCGGCCGCCCGTGGGAGACATGAGTTTGAAGGCAGCCTaGAGTGCAGGTCCAAGGGCACTGTGTGTTTCTCTGGTATTGATG | + |
|
Preference number: 5 (lower is better) Translates to: TDTRPPVGDMSLKAA*SAGPRALCVSLVLM Trigger: CATCAATACCAGAGAAACACACAGTGCCCTTGGACCTGCACTTCAGGCTGCCTTCAAACTCATGTCTCCCACGGGCGGCCGCGTGTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 |
||
| CDS CCA 90 bp | CATATAGTTTTGATGAGGCAGCCCATACCCAGATGGAACTTGCATTaGACTCTGTGCTGGACCGTTCTGCTGCGGCGGTGCCAGGCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: HIVLMRQPIPRWNLH*TLCWTVLLRRCQAG Trigger: TCCGGCCTGGCACCGCCGCAGCAGAACGGTCCAGCACAGAGTCCAATGCAAGTTCCATCTGGGTATGGGCTGCCTCATCAAAACTATATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS CCA 90 bp | CTCCTTCCAAGGCATCGTAACTGTTGGGCAAGGGCGAAGCACTGCTaGTGGTGGAAGAGCTGTCAACACCTGCTTCCTCATCCTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLPRHRNCWARAKHC*WWKSCQHLLPHPPP Trigger: AGGAGGAGGATGAGGAAGCAGGTGTTGACAGCTCTTCCACCACCAGCAGTGCTTCGCCCTTGCCCAACAGTTACGATGCCTTGGAAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS GCA 90 bp | TGGGTGAGGTTGACAGGTCTTAGGCTTTCTGGCTGTGGAGAACTCTaGAGGCTTAGTCCTCCGAGACCTGAGGACAGCTGGTTCACACCT | + |
|
Preference number: 5 (lower is better) Translates to: WVRLTGLRLSGCGEL*RLSPPRPEDSWFTP Trigger: AGGTGTGAACCAGCTGTCCTCAGGTCTCGGAGGACTAAGCCTGCAGAGTTCTCCACAGCCAGAAAGCCTAAGACCTGTCAACCTCACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 ENSMUST00000168644.3 |
||
| CDS GCA 90 bp | AGCCATGTTGGCGAGAAGGCAGACAGCGGCTTGCACATCCACTCCTaGATAAACGTCAGCGAGGGAACTTACGACTGGCAAGCACAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SHVGEKADSGLHIHS*INVSEGTYDWQAQC Trigger: ACACTGTGCTTGCCAGTCGTAAGTTCCCTCGCTGACGTTTATGCAGGAGTGGATGTGCAAGCCGCTGTCTGCCTTCTCGCCAACATGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 |
||
| CDS CCA 90 bp | GCTTCTGAAGCGGTGGCTGAGGTACTACCCTGTCATTCACGTGGATaGCGCCCTCGTCTGTCAGCCTGTCTATCCTGTATAAGTTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ASEAVAEVLPCHSRG*RPRLSACLSCISWD Trigger: ATCCCAACTTATACAGGATAGACAGGCTGACAGACGAGGGCGCCATCCACGTGAATGACAGGGTAGTACCTCAGCCACCGCTTCAGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR CAA 90 bp | GACTCTGTCTGCTGCCTCAGCGTCCTTGGAGGGGCTCTGCTGTGTCTTGTTCTCAACCCAGCATCAGGATaGATGTTGGCAAGAGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: DSVCCLSVLGGALLCLVLNPASG*MLARDS Trigger: ACTGTCTCTTGCCAACATCAATCCTGATGCTGGGTT...GAGAACAAGACACAGCAGAGCCCCTCCAAGGACGCTGAGGCAGCAGACAGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS TCA 90 bp | TTTCTGTTTAAGAAGTGCCAAAACATAGAGTGGGAGCAGCTTAAGTaGGCTTGGTGCTGTCAGGGTGGAGCGGGGCACACTTGCCACGGC | + |
|
Preference number: 5 (lower is better) Translates to: FLFKKCQNIEWEQLK*AWCCQGGAGHTCHG Trigger: GCCGTGGCAAGTGTGCCCCGCTCCACCCTGACAGCACCAAGCTCACTTAAGCTGCTCCCACTCTATGTTTTGGCACTTCTTAAACAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS TCA 90 bp | CACAGCCTTTGCCAACCCAAATGTAGAAAACTGAGCCGCAGTCCATaGGGAAAGCGCCTTCTCGGGTCAGCTTCTCTGCAGACAGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HSLCQPKCRKLSRSP*GKRLLGSASLQTAS Trigger: AGAAGCTGTCTGCAGAGAAGCTGACCCGAGAAGGCGCTTTCCTCATGGACTGCGGCTCAGTTTTCTACATTTGGGTTGGCAAAGGCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS CCA 90 bp | TCATTATTAGTTGGGTGGCTGTTCGCTGTAGCCAAGGATCCCATTTaGTTTCGGATGAGGCTGTCTTGGGCTGGTGGAAGGGCTGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: SLLVGWLFAVAKDPI*FRMRLSWAGGRAGP Trigger: AGGTCCAGCCCTTCCACCAGCCCAAGACAGCCTCATCCGAAACCAAATGGGATCCTTGGCTACAGCGAACAGCCACCCAACTAATAATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 ENSMUST00000168644.3 |
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| CDS CCA 90 bp | GATGGTGCACCACCTTGGTACTCGACCTCTGATTCGGATCTTCTCTaGACTGCAGAAGTCCTGCCCCCAAGGAAGGTAACTGTGTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: DGAPPWYSTSDSDLL*TAEVLPPRKVTVSE Trigger: TTCAGACACAGTTACCTTCCTTGGGGGCAGGACTTCTGCAGTCCAGAGAAGATCCGAATCAGAGGTCGAGTACCAAGGTGGTGCACCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 |
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| CDS CCA 90 bp | CTTCCAAGGCATCGTAACTGTTGGGCAAGGGCGAAGCACTGCTGGTaGTGGAAGAGCTGTCAACACCTTTATTTGCGAACTTCTCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LPRHRNCWARAKHCW*WKSCQHLYLRTSLG Trigger: CCCCAGAGAAGTTCGCAAATAAAGGTGTTGACAGCTCTTCCACCACCAGCAGTGCTTCGCCCTTGCCCAACAGTTACGATGCCTTGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168644.3 |
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| CDS-3UTR CAA 90 bp | ACAAGCGAGTACCACAGTGCCGCTGCCCTTCGGCATCTCTCATCAGAGTTCAAGTGGATACTACGGAGCTaGACTTGGGAGGTTGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: TSEYHSAAALRHLSSEFKWILRS*TWEVGH Trigger: ATGTCCAACCTCCCAAGTCAAGCTCCGTAGTATCCA...CTTGAACTCTGATGAGAGATGCCGAAGGGCAGCGGCACTGTGGTACTCGCTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CAA 90 bp | CGCTGCCCTTCGGCATCTCTCATCAGAGTTCAAGTCCAGAATGCTAACTGTACGAAGGCAGACAGCGGCTaGCACATCCACTCCTGCATA | + |
|
Preference number: 5 (lower is better) Translates to: RCPSASLIRVQVQNANCTKADSG*HIHSCI Trigger: TATGCAGGAGTGGATGTGCAAGCCGCTGTCTGCCTT...CGTACAGTTAGCATTCTGGACTTGAACTCTGATGAGAGATGCCGAAGGGCAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS TCA 90 bp | GGAAGGACCTCTGCCATACATCTGCTGTGCTCCTGGTTGGTTTGCTaGGCTGGGAGTCCCCGAATTTTGTGTTGGTACTGTATATGGACG | + |
|
Preference number: 5 (lower is better) Translates to: GRTSAIHLLCSWLVC*AGSPRILCWYCIWT Trigger: CGTCCATATACAGTACCAACACAAAATTCGGGGACTCCCAGCTCAGCAAACCAACCAGGAGCACAGCAGATGTATGGCAGAGGTCCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS GCA 90 bp | TGCCTCCTTCCAAGGCATCGTAACTGTTGGGCAAGGGCGAAGCACTaGTGGTGGTGGAAGAGCTGTCAACACCTTTATTTGCGAACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CLLPRHRNCWARAKH*WWWKSCQHLYLRTS Trigger: AGAAGTTCGCAAATAAAGGTGTTGACAGCTCTTCCACCACCAGCAGTGCTTCGCCCTTGCCCAACAGTTACGATGCCTTGGAAGGAGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168644.3 |
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| CDS CCA 90 bp | TTCGCTGTAGCCAAGGATCCCATTTGGTTTCGGATGAGGCTGTCTTaGGCTGGTGGAAGGGCTGGACCTGACCATGGTAGAGAACTATAT | + |
|
Preference number: 5 (lower is better) Translates to: FAVAKDPIWFRMRLS*AGGRAGPDHGRELY Trigger: ATATAGTTCTCTACCATGGTCAGGTCCAGCCCTTCCACCAGCCCAAGACAGCCTCATCCGAAACCAAATGGGATCCTTGGCTACAGCGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 ENSMUST00000168644.3 |
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| CDS CCA 90 bp | TTGCACATCCACTCCTGCATAAACGTCAGCGAGGGAACTTACGACTaGCAAGCACAGTGTATGCACTCGAATTCTCCGCTCGCCTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LHIHSCINVSEGTYD*QAQCMHSNSPLAFA Trigger: AGCAAAGGCGAGCGGAGAATTCGAGTGCATACACTGTGCTTGCCAGTCGTAAGTTCCCTCGCTGACGTTTATGCAGGAGTGGATGTGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 |
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| CDS CCA 90 bp | CTCCTTCCAAGGCATCGTAACTGTTGGGCAAGGGCGAAGCACTGCTaGTGGTGGAAGAGCTGTCAACACCTTTATTTGCGAACTTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLPRHRNCWARAKHC*WWKSCQHLYLRTSL Trigger: CAGAGAAGTTCGCAAATAAAGGTGTTGACAGCTCTTCCACCACCAGCAGTGCTTCGCCCTTGCCCAACAGTTACGATGCCTTGGAAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168644.3 |
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| CDS TCA 90 bp | CGAATTCTCCGCTCGCCTTTGCTAGATGTGTACAGCAGGGCTGTCTaGAAGCACACTAAGGCAGTATCTGTCAGGCTCTCTTCGATTGAC | + |
|
Preference number: 5 (lower is better) Translates to: RILRSPLLDVYSRAV*KHTKAVSVRLSSID Trigger: GTCAATCGAAGAGAGCCTGACAGATACTGCCTTAGTGTGCTTTCAGACAGCCCTGCTGTACACATCTAGCAAAGGCGAGCGGAGAATTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 |
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| CDS CCA 90 bp | GACCTCTGCCATACATCTGCTGTGCTCCTGGTTGGTTTGCTGAGCTaGGAGTCCCCGAATTTTGTGTTGGTACTGTATATGGACGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: DLCHTSAVLLVGLLS*ESPNFVLVLYMDES Trigger: ACTCTCGTCCATATACAGTACCAACACAAAATTCGGGGACTCCCAGCTCAGCAAACCAACCAGGAGCACAGCAGATGTATGGCAGAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CAA 90 bp | CCAATCTTTATAGTAAACAGCCTGCTGGGAACGACAGAATTCCTGATCAGAACAGTGCTCCTGGTTGGTTaGCTGAGCTGGGAGTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PIFIVNSLLGTTEFLIRTVLLVG*LSWESP Trigger: CGGGGACTCCCAGCTCAGCAAACCAACCAGGAGCAC...TGTTCTGATCAGGAATTCTGTCGTTCCCAGCAGGCTGTTTACTATAAAGATTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS TCA 90 bp | ATGGCGCCCTCGTCTGTCAGCCTGTCTATCCTGTATAAGTTGGGATaGATCATTTTCATGAGATGCACAAGCGGCTGCGACTTCATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: MAPSSVSLSILYKLG*IIFMRCTSGCDFIW Trigger: CCAGATGAAGTCGCAGCCGCTTGTGCATCTCATGAAAATGATTCATCCCAACTTATACAGGATAGACAGGCTGACAGACGAGGGCGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS TCA 90 bp | CAATGGCAAGGAGGTCATTTTCCCAGGTCCTTGAGAGTAATGTCCTaGAGGGACCATATAGTTTTGATGAGGCAGCCCATACCCAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: QWQGGHFPRSLRVMS*RDHIVLMRQPIPRW Trigger: CCATCTGGGTATGGGCTGCCTCATCAAAACTATATGGTCCCTTCAGGACATTACTCTCAAGGACCTGGGAAAATGACCTCCTTGCCATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS GCA 90 bp | GTTGGATGTGAATCAGAAACTCATAGTAGGAGAGTGCGGCTTCCGTaGGGTCTTCAAGCAAATGCTGGAAAAAGTCTGTTTTGGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VGCESETHSRRVRLP*GLQANAGKSLFWQG Trigger: GCCCTGCCAAAACAGACTTTTTCCAGCATTTGCTTGAAGACCGCACGGAAGCCGCACTCTCCTACTATGAGTTTCTGATTCACATCCAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS CCA 90 bp | ACGGAGCTTGACTTGGGAGGTTGGACATTTTCATTATTAGTTGGGTaGCTGTTCGCTGTAGCCAAGGATCCCATTTGGTTTCGGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TELDLGGWTFSLLVG*LFAVAKDPIWFRMR Trigger: CCTCATCCGAAACCAAATGGGATCCTTGGCTACAGCGAACAGCCACCCAACTAATAATGAAAATGTCCAACCTCCCAAGTCAAGCTCCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 ENSMUST00000168644.3 |
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| CDS CCA 90 bp | GGTCCTGGCAAAACTGTGGATACTACGGAGCTTGACTTGGGAGGTTaGACATTTTCATTATTAGTTGGGTGGCTGTTCGCTGTAGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GPGKTVDTTELDLGG*TFSLLVGWLFAVAK Trigger: CTTGGCTACAGCGAACAGCCACCCAACTAATAATGAAAATGTCCAACCTCCCAAGTCAAGCTCCGTAGTATCCACAGTTTTGCCAGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 ENSMUST00000168644.3 |
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| CDS-3UTR CAA 90 bp | TGTTCTCTCTTCCCCTTAATCTCTGGCCCAAGCCTCAGAGTGATGTGCATCGTTGCATCAGGATTGATGTaGGCAAGAGACAGTAAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: CSLFPLISGPSLRVMCIVASGLM*ARDSKS Trigger: CGACTTACTGTCTCTTGCCAACATCAATCCTGATGC...AACGATGCACATCACTCTGAGGCTTGGGCCAGAGATTAAGGGGAAGAGAGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CAA 90 bp | ACAAGCGAGTACCACAGTGCCGCTGCCCTTCGGCATCTCTCATCAGAGTTCAAGGAATCTCCAGGAAGCTaGTCTAAGTTTTCTAATAAG | + |
|
Preference number: 5 (lower is better) Translates to: TSEYHSAAALRHLSSEFKESPGS*SKFSNK Trigger: CTTATTAGAAAACTTAGACAAGCTTCCTGGAGATTC...CTTGAACTCTGATGAGAGATGCCGAAGGGCAGCGGCACTGTGGTACTCGCTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CAA 90 bp | TTCCTGTTAAGAAGTAATTCATACAAGCGAGTACCACAGTGCCGCTGCCCTTCGTCTGCTTGCGAAGGATaGTGGGTAGAGTGGAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: FLLRSNSYKRVPQCRCPSSACEG*WVEWKD Trigger: ATCTTTCCACTCTACCCACAATCCTTCGCAAGCAGA...CGAAGGGCAGCGGCACTGTGGTACTCGCTTGTATGAATTACTTCTTAACAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS TCA 90 bp | CTGTCAGCCTGTCTATCCTGTATAAGTTGGGATGAATCATTTTCATaGGATGCACAAGCGGCTGCGACTTCATCTGGCACATGGCATAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSACLSCISWDESFS*DAQAAATSSGTWHR Trigger: TCTATGCCATGTGCCAGATGAAGTCGCAGCCGCTTGTGCATCTCATGAAAATGATTCATCCCAACTTATACAGGATAGACAGGCTGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS GCA 90 bp | ACAAACCTGCTGTTGGATGTGAATCAGAAACTCATAGTAGGAGAGTaGGGCTTCCGTGCGGTCTTCAAGCAAATGCTGGAAAAAGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TNLLLDVNQKLIVGE*GFRAVFKQMLEKVC Trigger: ACAGACTTTTTCCAGCATTTGCTTGAAGACCGCACGGAAGCCGCACTCTCCTACTATGAGTTTCTGATTCACATCCAACAGCAGGTTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS CCA 90 bp | TTGGAGCAGGTGGCATTCTTGTTGATGAGGGTCCTGGCAAAACTGTaGATACTACGGAGCTTGACTTGGGAGGTTGGACATTTTCATTAT | + |
|
Preference number: 5 (lower is better) Translates to: LEQVAFLLMRVLAKL*ILRSLTWEVGHFHY Trigger: ATAATGAAAATGTCCAACCTCCCAAGTCAAGCTCCGTAGTATCCACAGTTTTGCCAGGACCCTCATCAACAAGAATGCCACCTGCTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 ENSMUST00000168644.3 |
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| CDS TCA 90 bp | CAGCGAGGGATAGGAAACATTAGGATACACCACATTAGACACAGTTaGGATGGGATAATGACTACAGGTAGAGGGATATCCCTGAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: QRGIGNIRIHHIRHS*DGIMTTGRGISLRS Trigger: GCTTCTCAGGGATATCCCTCTACCTGTAGTCATTATCCCATCTCAACTGTGTCTAATGTGGTGTATCCTAATGTTTCCTATCCCTCGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000168644.3 |
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| CDS GCA 90 bp | AGGATTGTGGGTAGAGTGGAAAGATGGATAGTAGAATATGCACCCTaGAGAGTACTTGGACATGCAAGCCAGAGAAGCAAGGTCAGAATA | + |
|
Preference number: 5 (lower is better) Translates to: RIVGRVERWIVEYAP*RVLGHASQRSKVRI Trigger: TATTCTGACCTTGCTTCTCTGGCTTGCATGTCCAAGTACTCTGCAGGGTGCATATTCTACTATCCATCTTTCCACTCTACCCACAATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 |
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| CDS CCA 90 bp | AGCAATCCTAAAGGAAGCTTAGCTTTATTCAGTAAAGCCTGTGTCTaGGGGATACTGGTCAAGGTACATCGAAACGAGTCTGGACTACAG | + |
|
Preference number: 5 (lower is better) Translates to: SNPKGSLALFSKACV*GILVKVHRNESGLQ Trigger: CTGTAGTCCAGACTCGTTTCGATGTACCTTGACCAGTATCCCCCAGACACAGGCTTTACTGAATAAAGCTAAGCTTCCTTTAGGATTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 |
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| CDS-3UTR CAA 90 bp | AATGGATCATCACCAATCTTTATAGTAAACAGCCTGCTGGGAACGACAGAATTCATTCTCCGCTCGCCTTaGCTAGATGTGTACAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NGSSPIFIVNSLLGTTEFILRSP*LDVYSR Trigger: CCTGCTGTACACATCTAGCAAAGGCGAGCGGAGAAT...GAATTCTGTCGTTCCCAGCAGGCTGTTTACTATAAAGATTGGTGATGATCCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS GCA 90 bp | GTGTTTGAGGTTATCACTGGCAATTGCGTCAGGTCTCTGAAGGGATaGAACAGCAATCCTAAAGGAAGCTTAGCTTTATTCAGTAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VFEVITGNCVRSLKG*NSNPKGSLALFSKA Trigger: GGCTTTACTGAATAAAGCTAAGCTTCCTTTAGGATTGCTGTTGCATCCCTTCAGAGACCTGACGCAATTGCCAGTGATAACCTCAAACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 |
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| CDS CCA 90 bp | AGGCTCTCCGTAAGACCGAGTCAGGGGGTTGTACAAAAACTCTTCTaGAACATCATTAACTCTATAACACAGGTTGCATTTCCATCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: RLSVRPSQGVVQKLF*NIINSITQVAFPSS Trigger: CGAAGATGGAAATGCAACCTGTGTTATAGAGTTAATGATGTTCCAGAAGAGTTTTTGTACAACCCCCTGACTCGGTCTTACGGAGAGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 |
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| CDS-3UTR CAA 90 bp | ATCATCACCAATCTTTATAGTAAACAGCCTGCTGGGAACGACAGAATTCCTGATATACCCAGATGGAACTaGCATTGGACTCTGTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IITNLYSKQPAGNDRIPDIPRWN*HWTLCW Trigger: CCAGCACAGAGTCCAATGCAAGTTCCATCTGGGTAT...ATCAGGAATTCTGTCGTTCCCAGCAGGCTGTTTACTATAAAGATTGGTGATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CAA 90 bp | GTCAGCCAACATTGCAGCACAGTTGAAGCAATTCATCTTCTTAGTTACAGCTTAGAAGCAACAGAAGCATaGGCAGAGTACGTGGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VSQHCSTVEAIHLLSYSLEATEA*AEYVVG Trigger: TCCTACCACGTACTCTGCCAATGCTTCTGTTGCTTC...TAAGCTGTAACTAAGAAGATGAATTGCTTCAACTGTGCTGCAATGTTGGCTGAC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CAA 90 bp | TTGTCAGCCAACATTGCAGCACAGTTGAAGCAATTCATCTTCTTAGTTACAGCTCAGGTGGCATTCTTGTaGATGAGGGTCCTGGCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LSANIAAQLKQFIFLVTAQVAFL*MRVLAK Trigger: TTTTGCCAGGACCCTCATCAACAAGAATGCCACCTG...AGCTGTAACTAAGAAGATGAATTGCTTCAACTGTGCTGCAATGTTGGCTGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CAA 90 bp | ATTCATTCACTAATGAATGAGACTTGGTATTGCATCTTCTCCAAGCGGCAAATTGAGCAGGTGGCATTCTaGTTGATGAGGGTCCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: IHSLMNETWYCIFSKRQIEQVAF*LMRVLA Trigger: TGCCAGGACCCTCATCAACAAGAATGCCACCTGCTC...AATTTGCCGCTTGGAGAAGATGCAATACCAAGTCTCATTCATTAGTGAATGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CAA 90 bp | AATGGATCATCACCAATCTTTATAGTAAACAGCCTGCTGGGAACGACAGAATTCTTCTCCTGGGTGAGGTaGACAGGTCTTAGGCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NGSSPIFIVNSLLGTTEFFSWVR*TGLRLS Trigger: AGAAAGCCTAAGACCTGTCAACCTCACCCAGGAGAA...GAATTCTGTCGTTCCCAGCAGGCTGTTTACTATAAAGATTGGTGATGATCCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CAA 90 bp | CCAATCTTTATAGTAAACAGCCTGCTGGGAACGACAGAATTCCTGATCAGAACAGGACTACAGTTTAACTaGCTGAGTTCTGCACTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PIFIVNSLLGTTEFLIRTGLQFN*LSSALR Trigger: CCTGAGTGCAGAACTCAGCAAGTTAAACTGTAGTCC...TGTTCTGATCAGGAATTCTGTCGTTCCCAGCAGGCTGTTTACTATAAAGATTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CAA 90 bp | GTCAGCCAACATTGCAGCACAGTTGAAGCAATTCATCTTCTTAGTTACAGCTTAGACCGAGTCAGGGGGTaGTACAAAAACTCTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VSQHCSTVEAIHLLSYSLDRVRG*YKNSSG Trigger: TCCAGAAGAGTTTTTGTACAACCCCCTGACTCGGTC...TAAGCTGTAACTAAGAAGATGAATTGCTTCAACTGTGCTGCAATGTTGGCTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR CAA 90 bp | TGTGACAGAGTTGTCAGCCAACATTGCAGCACAGTTGAAGCAATTCATCTTCTTTCTTATAAAAGTCGGTaGCAGGGCCAAGATGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: CDRVVSQHCSTVEAIHLLSYKSR*QGQDGA Trigger: TGCACCATCTTGGCCCTGCAACCGACTTTTATAAGA...AAGAAGATGAATTGCTTCAACTGTGCTGCAATGTTGGCTGACAACTCTGTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS-3UTR CAA 90 bp | ATTCATTCACTAATGAATGAGACTTGGTATTGCATCTTCTCCAAGCGGCAAATTCACCCTGCAGAGTACTaGGACATGCAAGCCAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: IHSLMNETWYCIFSKRQIHPAEY*DMQARE Trigger: TTCTCTGGCTTGCATGTCCAAGTACTCTGCAGGGTG...AATTTGCCGCTTGGAGAAGATGCAATACCAAGTCTCATTCATTAGTGAATGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS-3UTR CAA 90 bp | TGTGACAGAGTTGTCAGCCAACATTGCAGCACAGTTGAAGCAATTCATCTTCTTTCATTTTCTGTGGTATaGATGCAAAGTCAGGGTATC | + |
|
Preference number: 5 (lower is better) Translates to: CDRVVSQHCSTVEAIHLLSFSVV*MQSQGI Trigger: GATACCCTGACTTTGCATCAATACCACAGAAAATGA...AAGAAGATGAATTGCTTCAACTGTGCTGCAATGTTGGCTGACAACTCTGTCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS TCA 90 bp | ACCCTTCTTGTAGATTGTAGAAGTGAATGGTGCTGTCAAAAGTCATaGATCCTATTCTTGTTCGTGAATCTCCAGGAAGCTTGTCTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: TLLVDCRSEWCCQKS*ILFLFVNLQEACLS Trigger: ACTTAGACAAGCTTCCTGGAGATTCACGAACAAGAATAGGATTCATGACTTTTGACAGCACCATTCACTTCTACAATCTACAAGAAGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 |
||
| CDS-3UTR CAA 90 bp | ATTCATTCACTAATGAATGAGACTTGGTATTGCATCTTCTCCAAGCGGCAAATTACCTCACGATGGTGTTaGAGGTTATCACTGGCAATT | + |
|
Preference number: 5 (lower is better) Translates to: IHSLMNETWYCIFSKRQITSRWC*RLSLAI Trigger: AATTGCCAGTGATAACCTCAAACACCATCGTGAGGT...AATTTGCCGCTTGGAGAAGATGCAATACCAAGTCTCATTCATTAGTGAATGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS GCA 72 bp | CATTGGACTCTGTGCTGGACCGTTCTGCTGCGGCGGTaGCAGGCCGGAGACAGCTCCGCCGAGCTTGGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: HWTLCWTVLLRR*QAGDSSAELGR Trigger: CCGCCCAAGCTCGGCGGAGCTGTCTCCGGCCTGGCACCGCCGCAGCAGAACGGTCCAGCACAGAGTCCAATG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS GCA 72 bp | GCCGCTGGGATGTGCTGCGGGCATGGGTGGTGGTGCTaGGTTCTGATAGGCAGGCTGCAGAGCTGGGTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: AAGMCCGHGWWC*VLIGRLQSWVA Trigger: GGCTACCCAGCTCTGCAGCCTGCCTATCAGAACGCAGCACCACCACCCATGCCCGCAGCACATCCCAGCGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 ENSMUST00000168644.3 |
||
| CDS GCA 72 bp | GATGGAACTTGCATTGGACTCTGTGCTGGACCGTTCTaGTGCGGCGGTGCCAGGCCGGAGACAGCTCCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: DGTCIGLCAGPF*CGGARPETAPP Trigger: CGGCGGAGCTGTCTCCGGCCTGGCACCGCCGCAGCAGAACGGTCCAGCACAGAGTCCAATGCAAGTTCCATC 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS GCA 72 bp | TGGGCCGCTGGGATGTGCTGCGGGCATGGGTGGTGGTaGTGCGTTCTGATAGGCAGGCTGCAGAGCTGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: WAAGMCCGHGWW*CVLIGRLQSWV Trigger: TACCCAGCTCTGCAGCCTGCCTATCAGAACGCAGCACCACCACCCATGCCCGCAGCACATCCCAGCGGCCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 ENSMUST00000168644.3 |
||
| CDS CAA 72 bp | GTGAGCTTGGTGCTGTCAGGGTGGAGCGGGGCACACTaGCCACGGCGGAGCTGTAGGCAGACAGGGGATCCA | + |
|
Preference number: 6 (lower is better) Translates to: VSLVLSGWSGAH*PRRSCRQTGDP Trigger: TGGATCCCCTGTCTGCCTACAGCTCCGCCGTGGCAAGTGTGCCCCGCTCCACCCTGACAGCACCAAGCTCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS GCA 72 bp | CAGCCCATACCCAGATGGAACTTGCATTGGACTCTGTaGTGGACCGTTCTGCTGCGGCGGTGCCAGGCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: QPIPRWNLHWTL*WTVLLRRCQAG Trigger: TCCGGCCTGGCACCGCCGCAGCAGAACGGTCCAGCACAGAGTCCAATGCAAGTTCCATCTGGGTATGGGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS GCA 72 bp | AGGCTGCAGAGCTGGGTAGCCATAGCCAAAAGGCTTTaGCACCTTGGCTGGCTGAGCTGCAGGGGGAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RLQSWVAIAKRL*HLGWLSCRGSG Trigger: CCCACTCCCCCTGCAGCTCAGCCAGCCAAGGTGGCAAAGCCTTTTGGCTATGGCTACCCAGCTCTGCAGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 ENSMUST00000168644.3 |
||
| CDS CCA 72 bp | CCCATACCCAGATGGAACTTGCATTGGACTCTGTGCTaGACCGTTCTGCTGCGGCGGTGCCAGGCCGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: PIPRWNLHWTLC*TVLLRRCQAGD Trigger: GTCTCCGGCCTGGCACCGCCGCAGCAGAACGGTCCAGCACAGAGTCCAATGCAAGTTCCATCTGGGTATGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS GCA 72 bp | CTGAGGATATCCAGTGTACGCTGGGCCGCTGGGATGTaGTGCGGGCATGGGTGGTGGTGCTGCGTTCTGATA | + |
|
Preference number: 6 (lower is better) Translates to: LRISSVRWAAGM*CGHGWWCCVLI Trigger: TATCAGAACGCAGCACCACCACCCATGCCCGCAGCACATCCCAGCGGCCCAGCGTACACTGGATATCCTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 ENSMUST00000168644.3 |
||
| CDS CCA 72 bp | CTGGGTAGCTGCCTCCTTCCAAGGCATCGTAACTGTTaGGCAAGGGCGAAGCACTGCTGGTGGTGGAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LGSCLLPRHRNC*ARAKHCWWWKS Trigger: GCTCTTCCACCACCAGCAGTGCTTCGCCCTTGCCCAACAGTTACGATGCCTTGGAAGGAGGCAGCTACCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 ENSMUST00000168644.3 |
||
| CDS CAA 72 bp | GACAGGCTCGATGACACTGAGCGGTCCACAGCCATGTaGGCGAGAAGGCAGACAGCGGCTTGCACATCCACT | + |
|
Preference number: 6 (lower is better) Translates to: DRLDDTERSTAM*ARRQTAACTST Trigger: AGTGGATGTGCAAGCCGCTGTCTGCCTTCTCGCCAACATGGCTGTGGACCGCTCAGTGTCATCGAGCCTGTC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 |
||
| CDS CAA 90 bp | CCATATAGTTTTGATGAGGCAGCCCATACCCAGATGGAACTTGCATaGGACTCTGTGCTGGACCGTTCTGCTGCGGCGGTGCCAGGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: PYSFDEAAHTQMELA*DSVLDRSAAAVPGR Trigger: CCGGCCTGGCACCGCCGCAGCAGAACGGTCCAGCACAGAGTCCAATGCAAGTTCCATCTGGGTATGGGCTGCCTCATCAAAACTATATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS TCA 72 bp | CGAGGGGTAGGTAAGAGCTGTGCTGGGGCCAGAGTATaGCTCTTTAACTGGCCTGGCAGGTGGAGGAGCACT | + |
|
Preference number: 6 (lower is better) Translates to: RGVGKSCAGARV*LFNWPGRWRST Trigger: AGTGCTCCTCCACCTGCCAGGCCAGTTAAAGAGTCATACTCTGGCCCCAGCACAGCTCTTACCTACCCCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000168644.3 |
||
| CDS CCA 72 bp | TTGATGAGGCAGCCCATACCCAGATGGAACTTGCATTaGACTCTGTGCTGGACCGTTCTGCTGCGGCGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LMRQPIPRWNLH*TLCWTVLLRRC Trigger: GCACCGCCGCAGCAGAACGGTCCAGCACAGAGTCCAATGCAAGTTCCATCTGGGTATGGGCTGCCTCATCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS TCA 72 bp | GTAGACCGCGGGCTGAGGAGGCCGGAGCATGTAGTCTaGGGATGCGATGAACTCCACAGTAGAATTCTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: VDRGLRRPEHVV*GCDELHSRILD Trigger: GTCCAGAATTCTACTGTGGAGTTCATCGCATCCTCAGACTACATGCTCCGGCCTCCTCAGCCCGCGGTCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 |
||
| CDS TCA 72 bp | GGGCCAAGATGGTGCACCACCTTGGTACTCGACCTCTaGTTCGGATCTTCTCTGGACTGCAGAAGTCCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GPRWCTTLVLDL*FGSSLDCRSPA Trigger: GGCAGGACTTCTGCAGTCCAGAGAAGATCCGAATCAGAGGTCGAGTACCAAGGTGGTGCACCATCTTGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 |
||
| CDS GCA 72 bp | GGCGAGAAGGCAGACAGCGGCTTGCACATCCACTCCTaGATAAACGTCAGCGAGGGAACTTACGACTGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: GEKADSGLHIHS*INVSEGTYDWQ Trigger: TTGCCAGTCGTAAGTTCCCTCGCTGACGTTTATGCAGGAGTGGATGTGCAAGCCGCTGTCTGCCTTCTCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 |
||
| CDS CCA 72 bp | GTTGGGTGGCTGTTCGCTGTAGCCAAGGATCCCATTTaGTTTCGGATGAGGCTGTCTTGGGCTGGTGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: VGWLFAVAKDPI*FRMRLSWAGGR Trigger: CCTTCCACCAGCCCAAGACAGCCTCATCCGAAACCAAATGGGATCCTTGGCTACAGCGAACAGCCACCCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 ENSMUST00000168644.3 |
||
| CDS CCA 72 bp | CGTAACTGTTGGGCAAGGGCGAAGCACTGCTGGTGGTaGAAGAGCTGTCAACACCTGCTTCCTCATCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RNCWARAKHCWW*KSCQHLLPHPP Trigger: AGGAGGATGAGGAAGCAGGTGTTGACAGCTCTTCCACCACCAGCAGTGCTTCGCCCTTGCCCAACAGTTACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS CCA 72 bp | GCGGTGGCTGAGGTACTACCCTGTCATTCACGTGGATaGCGCCCTCGTCTGTCAGCCTGTCTATCCTGTATA | + |
|
Preference number: 6 (lower is better) Translates to: AVAEVLPCHSRG*RPRLSACLSCI Trigger: TATACAGGATAGACAGGCTGACAGACGAGGGCGCCATCCACGTGAATGACAGGGTAGTACCTCAGCCACCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS CAA 72 bp | TTTGATGAGGCAGCCCATACCCAGATGGAACTTGCATaGGACTCTGTGCTGGACCGTTCTGCTGCGGCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: FDEAAHTQMELA*DSVLDRSAAAV Trigger: CACCGCCGCAGCAGAACGGTCCAGCACAGAGTCCAATGCAAGTTCCATCTGGGTATGGGCTGCCTCATCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS CAA 90 bp | AGGGACCATATAGTTTTGATGAGGCAGCCCATACCCAGATGGAACTaGCATTGGACTCTGTGCTGGACCGTTCTGCTGCGGCGGTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RDHIVLMRQPIPRWN*HWTLCWTVLLRRCQ Trigger: CTGGCACCGCCGCAGCAGAACGGTCCAGCACAGAGTCCAATGCAAGTTCCATCTGGGTATGGGCTGCCTCATCAAAACTATATGGTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS CAA 90 bp | CAGAGGGCACAGGCCCAACTGGGTGACTTGGAGCAGGTGGCATTCTaGTTGATGAGGGTCCTGGCAAAACTGTGGATACTACGGAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: QRAQAQLGDLEQVAF*LMRVLAKLWILRSL Trigger: CAAGCTCCGTAGTATCCACAGTTTTGCCAGGACCCTCATCAACAAGAATGCCACCTGCTCCAAGTCACCCAGTTGGGCCTGTGCCCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 ENSMUST00000168644.3 |
||
| CDS CAA 90 bp | ATGCAAGCTCCCCACAGTCCAGGGTCTCTGTTCACAGGGCGCCACTaGCCACATCCAGCAAGGCTAGGTACTGGAAACCTGACTTTAGTC | + |
|
Preference number: 6 (lower is better) Translates to: MQAPHSPGSLFTGRH*PHPARLGTGNLTLV Trigger: GACTAAAGTCAGGTTTCCAGTACCTAGCCTTGCTGGATGTGGCAAGTGGCGCCCTGTGAACAGAGACCCTGGACTGTGGGGAGCTTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168644.3 |
||
| CDS TCA 72 bp | GGGTTCCAGGGCATGGTCAGGAACAGGGCTGCTTGCTaGAGAAGAATGCATATCTGGGTAGCTGCCTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GFQGMVRNRAAC*RRMHIWVAASF Trigger: GAAGGAGGCAGCTACCCAGATATGCATTCTTCTTCAGCAAGCAGCCCTGTTCCTGACCATGCCCTGGAACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 ENSMUST00000168644.3 |
||
| CDS GCA 72 bp | TGGGACTGGGTTCCAGGGCATGGTCAGGAACAGGGCTaGTTGCTGAAGAAGAATGCATATCTGGGTAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: WDWVPGHGQEQG*LLKKNAYLGSC Trigger: GCAGCTACCCAGATATGCATTCTTCTTCAGCAAGCAGCCCTGTTCCTGACCATGCCCTGGAACCCAGTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 ENSMUST00000168644.3 |
||
| CDS GCA 72 bp | TTGACAGGTCTTAGGCTTTCTGGCTGTGGAGAACTCTaGAGGCTTAGTCCTCCGAGACCTGAGGACAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LTGLRLSGCGEL*RLSPPRPEDSW Trigger: CCAGCTGTCCTCAGGTCTCGGAGGACTAAGCCTGCAGAGTTCTCCACAGCCAGAAAGCCTAAGACCTGTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 ENSMUST00000168644.3 |
||
| CDS CCA 72 bp | CATCGTAACTGTTGGGCAAGGGCGAAGCACTGCTGGTaGTGGAAGAGCTGTCAACACCTGCTTCCTCATCCT | + |
|
Preference number: 6 (lower is better) Translates to: HRNCWARAKHCW*WKSCQHLLPHP Trigger: AGGATGAGGAAGCAGGTGTTGACAGCTCTTCCACCACCAGCAGTGCTTCGCCCTTGCCCAACAGTTACGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS CCA 72 bp | AGGCATCGTAACTGTTGGGCAAGGGCGAAGCACTGCTaGTGGTGGAAGAGCTGTCAACACCTGCTTCCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: RHRNCWARAKHC*WWKSCQHLLPH Trigger: ATGAGGAAGCAGGTGTTGACAGCTCTTCCACCACCAGCAGTGCTTCGCCCTTGCCCAACAGTTACGATGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS TCA 72 bp | GTAGGGCTGGGAGGCACTCGAATAGGAATGGGATGCTaGTGCTGGAATTCCTTGGAAAGATCCGGGCATGGA | + |
|
Preference number: 6 (lower is better) Translates to: VGLGGTRIGMGC*CWNSLERSGHG Trigger: TCCATGCCCGGATCTTTCCAAGGAATTCCAGCATCAGCATCCCATTCCTATTCGAGTGCCTCCCAGCCCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS TCA 72 bp | GTACGTCCGACAGGACCGGCACCTCACGATGGTGTTTaGGGTTATCACTGGCAATTGCGTCAGGTCTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: VRPTGPAPHDGV*GYHWQLRQVSE Trigger: TTCAGAGACCTGACGCAATTGCCAGTGATAACCTCAAACACCATCGTGAGGTGCCGGTCCTGTCGGACGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 |
||
| CDS CCA 72 bp | CCACCTTGGTACTCGACCTCTGATTCGGATCTTCTCTaGACTGCAGAAGTCCTGCCCCCAAGGAAGGTAACT | + |
|
Preference number: 6 (lower is better) Translates to: PPWYSTSDSDLL*TAEVLPPRKVT Trigger: AGTTACCTTCCTTGGGGGCAGGACTTCTGCAGTCCAGAGAAGATCCGAATCAGAGGTCGAGTACCAAGGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 |
||
| CDS CAA 90 bp | TTCATTATTAGTTGGGTGGCTGTTCGCTGTAGCCAAGGATCCCATTaGGTTTCGGATGAGGCTGTCTTGGGCTGGTGGAAGGGCTGGACC | + |
|
Preference number: 6 (lower is better) Translates to: FIISWVAVRCSQGSH*VSDEAVLGWWKGWT Trigger: GGTCCAGCCCTTCCACCAGCCCAAGACAGCCTCATCCGAAACCAAATGGGATCCTTGGCTACAGCGAACAGCCACCCAACTAATAATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 ENSMUST00000168644.3 |
||
| CDS TCA 72 bp | CGCTCGCCTTTGCTAGATGTGTACAGCAGGGCTGTCTaGAAGCACACTAAGGCAGTATCTGTCAGGCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RSPLLDVYSRAV*KHTKAVSVRLS Trigger: AGAGAGCCTGACAGATACTGCCTTAGTGTGCTTTCAGACAGCCCTGCTGTACACATCTAGCAAAGGCGAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 |
||
| CDS TCA 72 bp | ACTGTCACAGCCTTTGCCAACCCAAATGTAGAAAACTaGGCCGCAGTCCATGAGGAAAGCGCCTTCTCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: TVTAFANPNVEN*AAVHEESAFSG Trigger: ACCCGAGAAGGCGCTTTCCTCATGGACTGCGGCTCAGTTTTCTACATTTGGGTTGGCAAAGGCTGTGACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS GCA 72 bp | TCAGCGAGGGAACTTACGACTGGCAAGCACAGTGTATaGACTCGAATTCTCCGCTCGCCTTTGCTAGATGTG | + |
|
Preference number: 6 (lower is better) Translates to: SARELTTGKHSV*TRILRSPLLDV Trigger: CACATCTAGCAAAGGCGAGCGGAGAATTCGAGTGCATACACTGTGCTTGCCAGTCGTAAGTTCCCTCGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 |
||
| CDS GCA 72 bp | CCAAGGCATCGTAACTGTTGGGCAAGGGCGAAGCACTaGTGGTGGTGGAAGAGCTGTCAACACCTTTATTTG | + |
|
Preference number: 6 (lower is better) Translates to: PRHRNCWARAKH*WWWKSCQHLYL Trigger: CAAATAAAGGTGTTGACAGCTCTTCCACCACCAGCAGTGCTTCGCCCTTGCCCAACAGTTACGATGCCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168644.3 |
||
| CDS CCA 72 bp | GAAGGACCTCTGCCATACATCTGCTGTGCTCCTGGTTaGTTTGCTGAGCTGGGAGTCCCCGAATTTTGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: EGPLPYICCAPG*FAELGVPEFCV Trigger: AACACAAAATTCGGGGACTCCCAGCTCAGCAAACCAACCAGGAGCACAGCAGATGTATGGCAGAGGTCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS CCA 72 bp | CACTCCTGCATAAACGTCAGCGAGGGAACTTACGACTaGCAAGCACAGTGTATGCACTCGAATTCTCCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: HSCINVSEGTYD*QAQCMHSNSPL Trigger: GAGCGGAGAATTCGAGTGCATACACTGTGCTTGCCAGTCGTAAGTTCCCTCGCTGACGTTTATGCAGGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 |
||
| CDS CCA 72 bp | AGGCATCGTAACTGTTGGGCAAGGGCGAAGCACTGCTaGTGGTGGAAGAGCTGTCAACACCTTTATTTGCGA | + |
|
Preference number: 6 (lower is better) Translates to: RHRNCWARAKHC*WWKSCQHLYLR Trigger: TCGCAAATAAAGGTGTTGACAGCTCTTCCACCACCAGCAGTGCTTCGCCCTTGCCCAACAGTTACGATGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168644.3 |
||
| CDS CAA 72 bp | ATAGTTTTGATGAGGCAGCCCATACCCAGATGGAACTaGCATTGGACTCTGTGCTGGACCGTTCTGCTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: IVLMRQPIPRWN*HWTLCWTVLLR Trigger: CCGCAGCAGAACGGTCCAGCACAGAGTCCAATGCAAGTTCCATCTGGGTATGGGCTGCCTCATCAAAACTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS CAA 72 bp | GACCTCTGCCATACATCTGCTGTGCTCCTGGTTGGTTaGCTGAGCTGGGAGTCCCCGAATTTTGTGTTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: DLCHTSAVLLVG*LSWESPNFVLV Trigger: TACCAACACAAAATTCGGGGACTCCCAGCTCAGCAAACCAACCAGGAGCACAGCAGATGTATGGCAGAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS CAA 72 bp | CAGGCCCAACTGGGTGACTTGGAGCAGGTGGCATTCTaGTTGATGAGGGTCCTGGCAAAACTGTGGATACTA | + |
|
Preference number: 6 (lower is better) Translates to: QAQLGDLEQVAF*LMRVLAKLWIL Trigger: TAGTATCCACAGTTTTGCCAGGACCCTCATCAACAAGAATGCCACCTGCTCCAAGTCACCCAGTTGGGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 ENSMUST00000168644.3 |
||
| CDS CAA 90 bp | GAGCGGAAGGACCTCTGCCATACATCTGCTGTGCTCCTGGTTGGTTaGCTGAGCTGGGAGTCCCCGAATTTTGTGTTGGTACTGTATATG | + |
|
Preference number: 6 (lower is better) Translates to: ERKDLCHTSAVLLVG*LSWESPNFVLVLYM Trigger: CATATACAGTACCAACACAAAATTCGGGGACTCCCAGCTCAGCAAACCAACCAGGAGCACAGCAGATGTATGGCAGAGGTCCTTCCGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS CCA 72 bp | GGATGCGATGAACTCCACAGTAGAATTCTGGACTTCTaGCCGTTTATGAGGCTCTCCGTAAGACCGAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: GCDELHSRILDF*PFMRLSVRPSQ Trigger: CTGACTCGGTCTTACGGAGAGCCTCATAAACGGCCAGAAGTCCAGAATTCTACTGTGGAGTTCATCGCATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 |
||
| CDS CCA 72 bp | CGTAACTGTTGGGCAAGGGCGAAGCACTGCTGGTGGTaGAAGAGCTGTCAACACCTTTATTTGCGAACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RNCWARAKHCWW*KSCQHLYLRTS Trigger: AGAAGTTCGCAAATAAAGGTGTTGACAGCTCTTCCACCACCAGCAGTGCTTCGCCCTTGCCCAACAGTTACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168644.3 |
||
| CDS CCA 72 bp | CATCGTAACTGTTGGGCAAGGGCGAAGCACTGCTGGTaGTGGAAGAGCTGTCAACACCTTTATTTGCGAACT | + |
|
Preference number: 6 (lower is better) Translates to: HRNCWARAKHCW*WKSCQHLYLRT Trigger: AGTTCGCAAATAAAGGTGTTGACAGCTCTTCCACCACCAGCAGTGCTTCGCCCTTGCCCAACAGTTACGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168644.3 |
||
| CDS CAA 90 bp | TTTGCTGCCCTGAGCAATCTAAAGCGAGCTTCTTATAAAAGTCGGTaGCAGGGCCAAGATGGTGCACCACCTTGGTACTCGACCTCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: FAALSNLKRASYKSR*QGQDGAPPWYSTSD Trigger: ATCAGAGGTCGAGTACCAAGGTGGTGCACCATCTTGGCCCTGCAACCGACTTTTATAAGAAGCTCGCTTTAGATTGCTCAGGGCAGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 |
||
| CDS CCA 72 bp | GACCATATAGTTTTGATGAGGCAGCCCATACCCAGATaGAACTTGCATTGGACTCTGTGCTGGACCGTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: DHIVLMRQPIPR*NLHWTLCWTVL Trigger: CAGAACGGTCCAGCACAGAGTCCAATGCAAGTTCCATCTGGGTATGGGCTGCCTCATCAAAACTATATGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
||
| CDS CCA 72 bp | GTGGCATTCTTGTTGATGAGGGTCCTGGCAAAACTGTaGATACTACGGAGCTTGACTTGGGAGGTTGGACAT | + |
|
Preference number: 6 (lower is better) Translates to: VAFLLMRVLAKL*ILRSLTWEVGH Trigger: ATGTCCAACCTCCCAAGTCAAGCTCCGTAGTATCCACAGTTTTGCCAGGACCCTCATCAACAAGAATGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 ENSMUST00000168644.3 |
||
| CDS CAA 72 bp | CTGAGCAATCTAAAGCGAGCTTCTTATAAAAGTCGGTaGCAGGGCCAAGATGGTGCACCACCTTGGTACTCG | + |
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Preference number: 6 (lower is better) Translates to: LSNLKRASYKSR*QGQDGAPPWYS Trigger: CGAGTACCAAGGTGGTGCACCATCTTGGCCCTGCAACCGACTTTTATAAGAAGCTCGCTTTAGATTGCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 |
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| CDS TCA 72 bp | GGAGGTCATTTTCCCAGGTCCTTGAGAGTAATGTCCTaGAGGGACCATATAGTTTTGATGAGGCAGCCCATA | + |
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Preference number: 6 (lower is better) Translates to: GGHFPRSLRVMS*RDHIVLMRQPI Trigger: TATGGGCTGCCTCATCAAAACTATATGGTCCCTTCAGGACATTACTCTCAAGGACCTGGGAAAATGACCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS GCA 72 bp | GGTAGAGTGGAAAGATGGATAGTAGAATATGCACCCTaGAGAGTACTTGGACATGCAAGCCAGAGAAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: GRVERWIVEYAP*RVLGHASQRSK Trigger: CTTGCTTCTCTGGCTTGCATGTCCAAGTACTCTGCAGGGTGCATATTCTACTATCCATCTTTCCACTCTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 |
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| CDS CCA 72 bp | TGGACGAGAGTAGTAACTATCACACTGGCTATCCAATaGCAAGGAGGTCATTTTCCCAGGTCCTTGAGAGTA | + |
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Preference number: 6 (lower is better) Translates to: WTRVVTITLAIQ*QGGHFPRSLRV Trigger: TACTCTCAAGGACCTGGGAAAATGACCTCCTTGCCATTGGATAGCCAGTGTGATAGTTACTACTCTCGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS CAA 90 bp | ATACTGGTCAAGGTACATCGAAACGAGTCTGGACTACAGTTTAACTaGCTGAGTTCTGCACTCAGGTTAGGTACAGGAGCCCAAATAGGA | + |
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Preference number: 6 (lower is better) Translates to: ILVKVHRNESGLQFN*LSSALRLGTGAQIG Trigger: TCCTATTTGGGCTCCTGTACCTAACCTGAGTGCAGAACTCAGCAAGTTAAACTGTAGTCCAGACTCGTTTCGATGTACCTTGACCAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 |
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| CDS GCA 72 bp | GAATCAGAAACTCATAGTAGGAGAGTGCGGCTTCCGTaGGGTCTTCAAGCAAATGCTGGAAAAAGTCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: ESETHSRRVRLP*GLQANAGKSLF Trigger: AAACAGACTTTTTCCAGCATTTGCTTGAAGACCGCACGGAAGCCGCACTCTCCTACTATGAGTTTCTGATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS CCA 72 bp | GCTGGGAGTCCCCGAATTTTGTGTTGGTACTGTATATaGACGAGAGTAGTAACTATCACACTGGCTATCCAA | + |
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Preference number: 6 (lower is better) Translates to: AGSPRILCWYCI*TRVVTITLAIQ Trigger: TTGGATAGCCAGTGTGATAGTTACTACTCTCGTCCATATACAGTACCAACACAAAATTCGGGGACTCCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS CCA 72 bp | TTCTGCTTGCGAAGGATTGTGGGTAGAGTGGAAAGATaGATAGTAGAATATGCACCCTGCAGAGTACTTGGA | + |
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Preference number: 6 (lower is better) Translates to: FCLRRIVGRVER*IVEYAPCRVLG Trigger: TCCAAGTACTCTGCAGGGTGCATATTCTACTATCCATCTTTCCACTCTACCCACAATCCTTCGCAAGCAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 |
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| CDS CAA 72 bp | GTTGGTTTGCTGAGCTGGGAGTCCCCGAATTTTGTGTaGGTACTGTATATGGACGAGAGTAGTAACTATCAC | + |
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Preference number: 6 (lower is better) Translates to: VGLLSWESPNFV*VLYMDESSNYH Trigger: GTGATAGTTACTACTCTCGTCCATATACAGTACCAACACAAAATTCGGGGACTCCCAGCTCAGCAAACCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS TCA 72 bp | TGTCTATCCTGTATAAGTTGGGATGAATCATTTTCATaGGATGCACAAGCGGCTGCGACTTCATCTGGCACA | + |
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Preference number: 6 (lower is better) Translates to: CLSCISWDESFS*DAQAAATSSGT Trigger: TGTGCCAGATGAAGTCGCAGCCGCTTGTGCATCTCATGAAAATGATTCATCCCAACTTATACAGGATAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001079.15 |
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| CDS GCA 72 bp | GTTATCACTGGCAATTGCGTCAGGTCTCTGAAGGGATaGAACAGCAATCCTAAAGGAAGCTTAGCTTTATTC | + |
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Preference number: 6 (lower is better) Translates to: VITGNCVRSLKG*NSNPKGSLALF Trigger: GAATAAAGCTAAGCTTCCTTTAGGATTGCTGTTGCATCCCTTCAGAGACCTGACGCAATTGCCAGTGATAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 |
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| CDS CCA 72 bp | AAGATGGATAGTAGAATATGCACCCTGCAGAGTACTTaGACATGCAAGCCAGAGAAGCAAGGTCAGAATACT | + |
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Preference number: 6 (lower is better) Translates to: KMDSRICTLQST*TCKPEKQGQNT Trigger: AGTATTCTGACCTTGCTTCTCTGGCTTGCATGTCCAAGTACTCTGCAGGGTGCATATTCTACTATCCATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 |
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| CDS CAA 72 bp | AGTGCAGGTCCAAGGGCACTGTGTGTTTCTCTGGTATaGATGAACATACTTGGTAATGCATTCAGTAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: SAGPRALCVSLV*MNILGNAFSKS Trigger: AGACTTACTGAATGCATTACCAAGTATGTTCATCAATACCAGAGAAACACACAGTGCCCTTGGACCTGCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 |
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| CDS CCA 72 bp | TGCTTTCATACAGATTCACAAGCAGACTATCCGGCGTaGGCAGAAAAACATCGTCTATATCAGATACAATCA | + |
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Preference number: 6 (lower is better) Translates to: CFHTDSQADYPA*AEKHRLYQIQS Trigger: TGATTGTATCTGATATAGACGATGTTTTTCTGCCCACGCCGGATAGTCTGCTTGTGAATCTGTATGAAAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 |
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| CDS TCA 72 bp | GTAGATTGTAGAAGTGAATGGTGCTGTCAAAAGTCATaGATCCTATTCTTGTTCGTGAATCTCCAGGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: VDCRSEWCCQKS*ILFLFVNLQEA Trigger: AGCTTCCTGGAGATTCACGAACAAGAATAGGATTCATGACTTTTGACAGCACCATTCACTTCTACAATCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 |
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| CDS CCA 72 bp | GTAAGACCGAGTCAGGGGGTTGTACAAAAACTCTTCTaGAACATCATTAACTCTATAACACAGGTTGCATTT | + |
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Preference number: 6 (lower is better) Translates to: VRPSQGVVQKLF*NIINSITQVAF Trigger: AAATGCAACCTGTGTTATAGAGTTAATGATGTTCCAGAAGAGTTTTTGTACAACCCCCTGACTCGGTCTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000001079.15 ENSMUST00000165873.8 |
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