Pregenerated sensors for SEC23IP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055319Ensembl transcript IDs: ENSMUST00000042942.10, ENSMUST00000205856.2, ENSMUST00000206986.2
Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCGGCGATGGCATTCGGCTTCATAAAAGCTGACATCAGCCTGGGATaGGGAGGCCTTGTCACAAGCAGGAGCAACTCCACACCAGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: SAMAFGFIKADISLG*GGLVTSRSNSTPGQ Trigger: CTGCCCTGGTGTGGAGTTGCTCCTGCTTGTGACAAGGCCTCCTCATCCCAGGCTGATGTCAGCTTTTATGAAGCCGAATGCCATCGCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| 3UTR TCA 90 bp | CGCACCTCAGGCACTGAGTGCTGGCACAGAAAGCTCCACTCACTGTaGAAGCCTGTTATTTGCTCAACTCGCAGGGGATATGCATGTGCC | + |
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Preference number: 1 (lower is better) Translates to: RTSGTECWHRKLHSL*KPVICSTRRGYACA Trigger: GGCACATGCATATCCCCTGCGAGTTGAGCAAATAACAGGCTTTCACAGTGAGTGGAGCTTTCTGTGCCAGCACTCAGTGCCTGAGGTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| 3UTR GCA 90 bp | TTTATAGTTAACAAAGGGTGCTGCAGAGCAGTCTTCAGGCAGCTCTaGATCCTCTCAAGCACACCGCTGCAAGTAAGGCTGAACCAACGC | + |
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Preference number: 1 (lower is better) Translates to: FIVNKGCCRAVFRQL*ILSSTPLQVRLNQR Trigger: GCGTTGGTTCAGCCTTACTTGCAGCGGTGTGCTTGAGAGGATGCAGAGCTGCCTGAAGACTGCTCTGCAGCACCCTTTGTTAACTATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| 3UTR GCA 90 bp | TCCTCATGCGGTCATAAAGGTACACATCGTAGCGTCCGCCATCCGTaGCTAGAACCACACTCTCAGGATCTGGCTGCACTGAATTATAGA | + |
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Preference number: 1 (lower is better) Translates to: SSCGHKGTHRSVRHP*LEPHSQDLAALNYR Trigger: TCTATAATTCAGTGCAGCCAGATCCTGAGAGTGTGGTTCTAGGCACGGATGGCGGACGCTACGATGTGTACCTTTATGACCGCATGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205856.2 |
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| 3UTR TCA 90 bp | ATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGAGACCTaGGACCCTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTA | + |
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Preference number: 1 (lower is better) Translates to: IPATTWWLTTICNET*DPLLECLKTATVYL Trigger: TAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGAGGGTCTCAGGTCTCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| 3UTR GCA 90 bp | GTTAGGAACTATTTAGAGACTGAGTTTATAGTTAACAAAGGGTGCTaGAGAGCAGTCTTCAGGCAGCTCTGCATCCTCTCAAGCACACCG | + |
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Preference number: 1 (lower is better) Translates to: VRNYLETEFIVNKGC*RAVFRQLCILSSTP Trigger: CGGTGTGCTTGAGAGGATGCAGAGCTGCCTGAAGACTGCTCTGCAGCACCCTTTGTTAACTATAAACTCAGTCTCTAAATAGTTCCTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| 3UTR GCA 90 bp | TCTGTTAGGAACTATTTAGAGACTGAGTTTATAGTTAACAAAGGGTaGTGCAGAGCAGTCTTCAGGCAGCTCTGCATCCTCTCAAGCACA | + |
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Preference number: 1 (lower is better) Translates to: SVRNYLETEFIVNKG*CRAVFRQLCILSST Trigger: TGTGCTTGAGAGGATGCAGAGCTGCCTGAAGACTGCTCTGCAGCACCCTTTGTTAACTATAAACTCAGTCTCTAAATAGTTCCTAACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| 3UTR-3UTR TCA 90 bp | AGAGGTCAGATCATCACAAGAGTTCTAGAAAGTAAAAAGTGCTTCACGGGCTGGGACATCAGCCTGGGATaGGGAGGCCTTGTCACAAGC | + |
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Preference number: 2 (lower is better) Translates to: RGQIITRVLESKKCFTGWDISLG*GGLVTS Trigger: GCTTGTGACAAGGCCTCCTCATCCCAGGCTGATGTC...CCAGCCCGTGAAGCACTTTTTACTTTCTAGAACTCTTGTGATGATCTGACCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| 3UTR-3UTR TCA 90 bp | GAGACTGAGTTTATAGTTAACAAAGGGTGCTGCAGAGCAGTCTTCAGGCAGCTCCCTGCCTTTGCTTCTTaGGTGCTGAGATTAAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: ETEFIVNKGCCRAVFRQLPAFAS*VLRLKA Trigger: GGCCTTTAATCTCAGCACTCAAGAAGCAAAGGCAGG...GAGCTGCCTGAAGACTGCTCTGCAGCACCCTTTGTTAACTATAAACTCAGTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| 3UTR-3UTR GCA 90 bp | GAGACTGAGTTTATAGTTAACAAAGGGTGCTGCAGAGCAGTCTTCAGGCAGCTCCAGGGGATATGCATGTaGCAGGAGAGGTCAGATCAT | + |
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Preference number: 2 (lower is better) Translates to: ETEFIVNKGCCRAVFRQLQGICM*QERSDH Trigger: ATGATCTGACCTCTCCTGGCACATGCATATCCCCTG...GAGCTGCCTGAAGACTGCTCTGCAGCACCCTTTGTTAACTATAAACTCAGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| 3UTR-3UTR CCA 90 bp | TTATTTGCTCAACTCGCAGGGGATATGCATGTGCCAGGAGAGGTCAGATCATCAATCCCAGCAACCACATaGTGGCTCACAACCATCTGT | + |
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Preference number: 2 (lower is better) Translates to: LFAQLAGDMHVPGEVRSSIPATT*WLTTIC Trigger: ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAT...TGATGATCTGACCTCTCCTGGCACATGCATATCCCCTGCGAGTTGAGCAAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| 3UTR-3UTR TCA 90 bp | GGATATGCATGTGCCAGGAGAGGTCAGATCATCACAAGAGTTCTAGAAAGTAAAGGAGCCTCTCAGCAATaGCACTCATGCTGGAACTTC | + |
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Preference number: 2 (lower is better) Translates to: GYACARRGQIITRVLESKGASQQ*HSCWNF Trigger: GAAGTTCCAGCATGAGTGTCATTGCTGAGAGGCTCC...TTTACTTTCTAGAACTCTTGTGATGATCTGACCTCTCCTGGCACATGCATATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| 3UTR-3UTR TCA 90 bp | ACAGAAAGCTCCACTCACTGTGAAAGCCTGTTATTTGCTCAACTCGCAGGGGATGCTAGCAATTGTTGCTaGGTCACTTTTCTGTCATCC | + |
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Preference number: 2 (lower is better) Translates to: TESSTHCESLLFAQLAGDASNCC*VTFLSS Trigger: GGATGACAGAAAAGTGACTCAGCAACAATTGCTAGC...ATCCCCTGCGAGTTGAGCAAATAACAGGCTTTCACAGTGAGTGGAGCTTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| 3UTR-3UTR GCA 90 bp | GAGACTGAGTTTATAGTTAACAAAGGGTGCTGCAGAGCAGTCTTCAGGCAGCTCAGATCCACCTGCCTTTaGTTCTTGAGTGCTGAGATT | + |
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Preference number: 2 (lower is better) Translates to: ETEFIVNKGCCRAVFRQLRSTCL*FLSAEI Trigger: AATCTCAGCACTCAAGAAGCAAAGGCAGGTGGATCT...GAGCTGCCTGAAGACTGCTCTGCAGCACCCTTTGTTAACTATAAACTCAGTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| 3UTR GCA 72 bp | GGTCATAAAGGTACACATCGTAGCGTCCGCCATCCGTaGCTAGAACCACACTCTCAGGATCTGGCTGCACTG | + |
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Preference number: 3 (lower is better) Translates to: GHKGTHRSVRHP*LEPHSQDLAAL Trigger: CAGTGCAGCCAGATCCTGAGAGTGTGGTTCTAGGCACGGATGGCGGACGCTACGATGTGTACCTTTATGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205856.2 |
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| 3UTR TCA 72 bp | GCATTCGGCTTCATAAAAGCTGACATCAGCCTGGGATaGGGAGGCCTTGTCACAAGCAGGAGCAACTCCACA | + |
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Preference number: 3 (lower is better) Translates to: AFGFIKADISLG*GGLVTSRSNST Trigger: TGTGGAGTTGCTCCTGCTTGTGACAAGGCCTCCTCATCCCAGGCTGATGTCAGCTTTTATGAAGCCGAATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| 3UTR TCA 72 bp | GGCACTGAGTGCTGGCACAGAAAGCTCCACTCACTGTaGAAGCCTGTTATTTGCTCAACTCGCAGGGGATAT | + |
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Preference number: 3 (lower is better) Translates to: GTECWHRKLHSL*KPVICSTRRGY Trigger: ATATCCCCTGCGAGTTGAGCAAATAACAGGCTTTCACAGTGAGTGGAGCTTTCTGTGCCAGCACTCAGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| 3UTR TCA 72 bp | ACCACATGGTGGCTCACAACCATCTGTAATGAGACCTaGGACCCTCTTCTGGAGTGTCTGAAGACAGCTACA | + |
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Preference number: 3 (lower is better) Translates to: TTWWLTTICNET*DPLLECLKTAT Trigger: TGTAGCTGTCTTCAGACACTCCAGAAGAGGGTCTCAGGTCTCATTACAGATGGTTGTGAGCCACCATGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| 3UTR CCA 72 bp | TCCTATGTAGTCCTGACTGTCCTGAAACTTGCTATATaGACCAAGCTGACCTCCAGCTCAGAGATCCACCTG | + |
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Preference number: 3 (lower is better) Translates to: SYVVLTVLKLAI*TKLTSSSEIHL Trigger: CAGGTGGATCTCTGAGCTGGAGGTCAGCTTGGTCCATATAGCAAGTTTCAGGACAGTCAGGACTACATAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| 3UTR GCA 72 bp | TTGTTGCTGAGTCACTTTTCTGTCATCCATCATAGATaGAAAGACGGATCAGCCACCAAGGAGCCTCTCAGC | + |
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Preference number: 3 (lower is better) Translates to: LLLSHFSVIHHR*KDGSATKEPLS Trigger: GCTGAGAGGCTCCTTGGTGGCTGATCCGTCTTTGCATCTATGATGGATGACAGAAAAGTGACTCAGCAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| 3UTR GCA 72 bp | AACTATTTAGAGACTGAGTTTATAGTTAACAAAGGGTaGTGCAGAGCAGTCTTCAGGCAGCTCTGCATCCTC | + |
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Preference number: 3 (lower is better) Translates to: NYLETEFIVNKG*CRAVFRQLCIL Trigger: GAGGATGCAGAGCTGCCTGAAGACTGCTCTGCAGCACCCTTTGTTAACTATAAACTCAGTCTCTAAATAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR CCA 90 bp | CGTAGCGTCCGCCATCCGTGCCTAGAACCACACTCTCAGGATCTGGCTGCACTGGGGGTCCTGCGGGTCTaGCAGGGACTTGCTGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: RSVRHPCLEPHSQDLAALGVLRV*QGLAAV Trigger: CACAGCAGCAAGTCCCTGCCAGACCCGCAGGACCCC...CAGTGCAGCCAGATCCTGAGAGTGTGGTTCTAGGCACGGATGGCGGACGCTACG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205856.2 |
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| CDS-3UTR TCA 90 bp | GCCTGGGATGAGGAGGCCTTGTCACAAGCAGGAGCAACTCCACACCAGGGCAGCGGGTTATGTCCTTGTTaGGGAATCCCCTGGGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: AWDEEALSQAGATPHQGSGLCPC*GIPWGG Trigger: CCCACCCCAGGGGATTCCTCAACAAGGACATAACCC...GCTGCCCTGGTGTGGAGTTGCTCCTGCTTGTGACAAGGCCTCCTCATCCCAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR CCA 90 bp | GCCTGGGATGAGGAGGCCTTGTCACAAGCAGGAGCAACTCCACACCAGGGCAGCGCGTTTTACAACTCTTaGCCTTGTCTGTCCGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: AWDEEALSQAGATPHQGSAFYNS*PCLSVL Trigger: CAAGACGGACAGACAAGGCCAAGAGTTGTAAAACGC...GCTGCCCTGGTGTGGAGTTGCTCCTGCTTGTGACAAGGCCTCCTCATCCCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR GCA 90 bp | GCCTGGGATGAGGAGGCCTTGTCACAAGCAGGAGCAACTCCACACCAGGGCAGCAGTGAAGTCTCTTCCTaGCTTTGTGATGTGGAACGA | + |
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Preference number: 4 (lower is better) Translates to: AWDEEALSQAGATPHQGSSEVSS*LCDVER Trigger: TCGTTCCACATCACAAAGGCAGGAAGAGACTTCACT...GCTGCCCTGGTGTGGAGTTGCTCCTGCTTGTGACAAGGCCTCCTCATCCCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR CCA 90 bp | TCCACTCACTGTGAAAGCCTGTTATTTGCTCAACTCGCAGGGGATATGCATGTGGGGGTCCTGCGGGTCTaGCAGGGACTTGCTGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: STHCESLLFAQLAGDMHVGVLRV*QGLAAV Trigger: CACAGCAGCAAGTCCCTGCCAGACCCGCAGGACCCC...CACATGCATATCCCCTGCGAGTTGAGCAAATAACAGGCTTTCACAGTGAGTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR CCA 90 bp | GCCTGGGATGAGGAGGCCTTGTCACAAGCAGGAGCAACTCCACACCAGGGCAGCGGCACTGAAGAAGGCTaGAACTGGACAATAACCTTT | + |
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Preference number: 4 (lower is better) Translates to: AWDEEALSQAGATPHQGSGTEEG*NWTITF Trigger: AAAGGTTATTGTCCAGTTCCAGCCTTCTTCAGTGCC...GCTGCCCTGGTGTGGAGTTGCTCCTGCTTGTGACAAGGCCTCCTCATCCCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR TCA 90 bp | AAAGGTACACATCGTAGCGTCCGCCATCCGTGCCTAGAACCACACTCTCAGGATTTGCTGCTGTGCTGGTaGCTGCATTGCTGTGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: KGTHRSVRHPCLEPHSQDLLLCW*LHCCGK Trigger: CTTCCCACAGCAATGCAGTCACCAGCACAGCAGCAA...ATCCTGAGAGTGTGGTTCTAGGCACGGATGGCGGACGCTACGATGTGTACCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205856.2 |
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| CDS-3UTR CCA 90 bp | GCCTGGGATGAGGAGGCCTTGTCACAAGCAGGAGCAACTCCACACCAGGGCAGCCATTTCCTTAGTTTTTaGAGCACTCTCGTCTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: AWDEEALSQAGATPHQGSHFLSF*STLVLS Trigger: GGACAAGACGAGAGTGCTCCAAAAACTAAGGAAATG...GCTGCCCTGGTGTGGAGTTGCTCCTGCTTGTGACAAGGCCTCCTCATCCCAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR GCA 90 bp | CGCCATCCGTGCCTAGAACCACACTCTCAGGATCTGGCTGCACTGAATTATAGATGCTGTGCTGGTGACTaGATTGCTGTGGGAAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: RHPCLEPHSQDLAALNYRCCAGD*IAVGSS Trigger: GGAGCTTCCCACAGCAATGCAGTCACCAGCACAGCA...TCTATAATTCAGTGCAGCCAGATCCTGAGAGTGTGGTTCTAGGCACGGATGGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205856.2 |
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| CDS-3UTR CCA 90 bp | GAGACTGAGTTTATAGTTAACAAAGGGTGCTGCAGAGCAGTCTTCAGGCAGCTCTGCTGTGGGAAGCGGTaGCAATGGTCCAGGCGGCAT | + |
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Preference number: 4 (lower is better) Translates to: ETEFIVNKGCCRAVFRQLCCGKR*QWSRRH Trigger: ATGCCGCCTGGACCATTGCCACCGCTTCCCACAGCA...GAGCTGCCTGAAGACTGCTCTGCAGCACCCTTTGTTAACTATAAACTCAGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR TCA 90 bp | GGATATGCATGTGCCAGGAGAGGTCAGATCATCACAAGAGTTCTAGAAAGTAAAGCTGGTGCCCATCTGTaGGGGAGGGGTAGCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: GYACARRGQIITRVLESKAGAHL*GRGSTR Trigger: CCTGGTGCTACCCCTCCCTCACAGATGGGCACCAGC...TTTACTTTCTAGAACTCTTGTGATGATCTGACCTCTCCTGGCACATGCATATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR TCA 90 bp | ACAGAAAGCTCCACTCACTGTGAAAGCCTGTTATTTGCTCAACTCGCAGGGGATGAGTGGCCTGGCATCTaGCACTGCTGTAGCTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: TESSTHCESLLFAQLAGDEWPGI*HCCSCG Trigger: TCCACAGCTACAGCAGTGTCAGATGCCAGGCCACTC...ATCCCCTGCGAGTTGAGCAAATAACAGGCTTTCACAGTGAGTGGAGCTTTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR GCA 90 bp | ACAGAAAGCTCCACTCACTGTGAAAGCCTGTTATTTGCTCAACTCGCAGGGGATGCAAATAGGTGCTGGTaGCCATCTGTGAGGGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: TESSTHCESLLFAQLAGDANRCW*PSVREG Trigger: CCCCTCCCTCACAGATGGGCACCAGCACCTATTTGC...ATCCCCTGCGAGTTGAGCAAATAACAGGCTTTCACAGTGAGTGGAGCTTTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR TCA 90 bp | GTCCGCCATCCGTGCCTAGAACCACACTCTCAGGATCTGGCTGCACTGAATTATGGTTCGTACTGGTTCTaGAGTACAAAAGGAGATGGC | + |
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Preference number: 4 (lower is better) Translates to: VRHPCLEPHSQDLAALNYGSYWF*STKGDG Trigger: GCCATCTCCTTTTGTACTTCAGAACCAGTACGAACC...ATAATTCAGTGCAGCCAGATCCTGAGAGTGTGGTTCTAGGCACGGATGGCGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205856.2 |
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| CDS-3UTR TCA 90 bp | TCCACTCACTGTGAAAGCCTGTTATTTGCTCAACTCGCAGGGGATATGCATGTGCCACTCATCTGGCACTaGAGAAGGCTGGAACTGGAC | + |
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Preference number: 4 (lower is better) Translates to: STHCESLLFAQLAGDMHVPLIWH*RRLELD Trigger: GTCCAGTTCCAGCCTTCTTCAGTGCCAGATGAGTGG...CACATGCATATCCCCTGCGAGTTGAGCAAATAACAGGCTTTCACAGTGAGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR TCA 90 bp | TTATTTGCTCAACTCGCAGGGGATATGCATGTGCCAGGAGAGGTCAGATCATCAACCAAGTGGTCAACCTaGGGCATCTCCCCATCAGGA | + |
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Preference number: 4 (lower is better) Translates to: LFAQLAGDMHVPGEVRSSTKWST*GISPSG Trigger: TCCTGATGGGGAGATGCCTCAGGTTGACCACTTGGT...TGATGATCTGACCTCTCCTGGCACATGCATATCCCCTGCGAGTTGAGCAAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR GCA 90 bp | GAGACTGAGTTTATAGTTAACAAAGGGTGCTGCAGAGCAGTCTTCAGGCAGCTCCAAAGCAGCCAGCGCTaGCTTCTTTTCTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: ETEFIVNKGCCRAVFRQLQSSQR*LLFCCC Trigger: GCAGCAGCAGAAAAGAAGGCAGCGCTGGCTGCTTTG...GAGCTGCCTGAAGACTGCTCTGCAGCACCCTTTGTTAACTATAAACTCAGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR CCA 90 bp | TCCACTCACTGTGAAAGCCTGTTATTTGCTCAACTCGCAGGGGATATGCATGTGGCTGTGCCAGTGAACTaGCAGGAACTCCACTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: STHCESLLFAQLAGDMHVAVPVN*QELHSA Trigger: AGCAGAGTGGAGTTCCTGCCAGTTCACTGGCACAGC...CACATGCATATCCCCTGCGAGTTGAGCAAATAACAGGCTTTCACAGTGAGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| 3UTR CAA 72 bp | GCACAGAAAGCTCCACTCACTGTGAAAGCCTGTTATTaGCTCAACTCGCAGGGGATATGCATGTGCCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: AQKAPLTVKACY*LNSQGICMCQE Trigger: CTCCTGGCACATGCATATCCCCTGCGAGTTGAGCAAATAACAGGCTTTCACAGTGAGTGGAGCTTTCTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR CCA 90 bp | TCCACTCACTGTGAAAGCCTGTTATTTGCTCAACTCGCAGGGGATATGCATGTGGCGTCTCACTTCAGTTaGCTCCTCTTCCCAGTACAC | + |
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Preference number: 4 (lower is better) Translates to: STHCESLLFAQLAGDMHVASHFS*LLFPVH Trigger: GTGTACTGGGAAGAGGAGCCAACTGAAGTGAGACGC...CACATGCATATCCCCTGCGAGTTGAGCAAATAACAGGCTTTCACAGTGAGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR TCA 90 bp | ACAGAAAGCTCCACTCACTGTGAAAGCCTGTTATTTGCTCAACTCGCAGGGGATCGGAGACCTTTCCTTTaGAGTTTGGGTTCCGACTCA | + |
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Preference number: 4 (lower is better) Translates to: TESSTHCESLLFAQLAGDRRPFL*SLGSDS Trigger: TGAGTCGGAACCCAAACTTCAAAGGAAAGGTCTCCG...ATCCCCTGCGAGTTGAGCAAATAACAGGCTTTCACAGTGAGTGGAGCTTTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR TCA 90 bp | AGAGGTCAGATCATCACAAGAGTTCTAGAAAGTAAAAAGTGCTTCACGGGCTGGCACGTAAGCCCCAACTaGGAGCTTCCTCTTGGACTC | + |
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Preference number: 4 (lower is better) Translates to: RGQIITRVLESKKCFTGWHVSPN*ELPLGL Trigger: GAGTCCAAGAGGAAGCTCTCAGTTGGGGCTTACGTG...CCAGCCCGTGAAGCACTTTTTACTTTCTAGAACTCTTGTGATGATCTGACCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR GCA 90 bp | AGAGGTCAGATCATCACAAGAGTTCTAGAAAGTAAAAAGTGCTTCACGGGCTGGGGCATTTGGTATGTCTaGACAGGGGGTCCAGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: RGQIITRVLESKKCFTGWGIWYV*TGGPEG Trigger: GCCTTCTGGACCCCCTGTGCAGACATACCAAATGCC...CCAGCCCGTGAAGCACTTTTTACTTTCTAGAACTCTTGTGATGATCTGACCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR GCA 90 bp | GGATATGCATGTGCCAGGAGAGGTCAGATCATCACAAGAGTTCTAGAAAGTAAAAGCGTCCGCCATCCGTaGCTAGAACCACACTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: GYACARRGQIITRVLESKSVRHP*LEPHSQ Trigger: CTGAGAGTGTGGTTCTAGGCACGGATGGCGGACGCT...TTTACTTTCTAGAACTCTTGTGATGATCTGACCTCTCCTGGCACATGCATATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR GCA 90 bp | TTATTTGCTCAACTCGCAGGGGATATGCATGTGCCAGGAGAGGTCAGATCATCATTGGAAACTCCAGTCTaGGGTGCCACTGATTTGTGC | + |
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Preference number: 4 (lower is better) Translates to: LFAQLAGDMHVPGEVRSSLETPV*GATDLC Trigger: GCACAAATCAGTGGCACCGCAGACTGGAGTTTCCAA...TGATGATCTGACCTCTCCTGGCACATGCATATCCCCTGCGAGTTGAGCAAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR GCA 90 bp | ACAGAAAGCTCCACTCACTGTGAAAGCCTGTTATTTGCTCAACTCGCAGGGGATCACCTTTTCCACAATTaGCTGGCAGTAGGTAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: TESSTHCESLLFAQLAGDHLFHN*LAVGRA Trigger: AGCCCTACCTACTGCCAGGCAATTGTGGAAAAGGTG...ATCCCCTGCGAGTTGAGCAAATAACAGGCTTTCACAGTGAGTGGAGCTTTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR GCA 90 bp | GAGACTGAGTTTATAGTTAACAAAGGGTGCTGCAGAGCAGTCTTCAGGCAGCTCGTCAAACAGGCTGAGTaGTTCCAGGGTTCCATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ETEFIVNKGCCRAVFRQLVKQAE*FQGSMQ Trigger: TTGCATGGAACCCTGGAAGCACTCAGCCTGTTTGAC...GAGCTGCCTGAAGACTGCTCTGCAGCACCCTTTGTTAACTATAAACTCAGTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR CCA 90 bp | ACAGAAAGCTCCACTCACTGTGAAAGCCTGTTATTTGCTCAACTCGCAGGGGATGATAGTCTCTCCACTTaGAAACTCCAGTCTGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TESSTHCESLLFAQLAGDDSLST*KLQSAV Trigger: CACCGCAGACTGGAGTTTCCAAGTGGAGAGACTATC...ATCCCCTGCGAGTTGAGCAAATAACAGGCTTTCACAGTGAGTGGAGCTTTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR CCA 90 bp | AGAGGTCAGATCATCACAAGAGTTCTAGAAAGTAAAAAGTGCTTCACGGGCTGGCTTGTCTGTCCGTCTTaGGTCGTCCCCCACTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: RGQIITRVLESKKCFTGWLVCPS*VVPHSS Trigger: AGATGAGTGGGGGACGACCCAAGACGGACAGACAAG...CCAGCCCGTGAAGCACTTTTTACTTTCTAGAACTCTTGTGATGATCTGACCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR TCA 90 bp | ACAGAAAGCTCCACTCACTGTGAAAGCCTGTTATTTGCTCAACTCGCAGGGGATGGGATCACTACTGCTTaGGACCTGAGAGAAGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: TESSTHCESLLFAQLAGDGITTA*DLREVT Trigger: AGTTACTTCTCTCAGGTCTCAAGCAGTAGTGATCCC...ATCCCCTGCGAGTTGAGCAAATAACAGGCTTTCACAGTGAGTGGAGCTTTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR TCA 90 bp | GAGACTGAGTTTATAGTTAACAAAGGGTGCTGCAGAGCAGTCTTCAGGCAGCTCGTCTCATTGGTAAAGTaGCGGAACCGACCGATACTT | + |
|
Preference number: 4 (lower is better) Translates to: ETEFIVNKGCCRAVFRQLVSLVK*RNRPIL Trigger: AAGTATCGGTCGGTTCCGTCACTTTACCAATGAGAC...GAGCTGCCTGAAGACTGCTCTGCAGCACCCTTTGTTAACTATAAACTCAGTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR GCA 90 bp | ACAGAAAGCTCCACTCACTGTGAAAGCCTGTTATTTGCTCAACTCGCAGGGGATGCTTCCAGGGTTCCATaGAAAGTTAGGGGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TESSTHCESLLFAQLAGDASRVP*KVRGSS Trigger: TGAAGAACCCCTAACTTTGCATGGAACCCTGGAAGC...ATCCCCTGCGAGTTGAGCAAATAACAGGCTTTCACAGTGAGTGGAGCTTTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR TCA 90 bp | AGATCTGAGAATTTCCCACAGCATCATTTTACGGTTGTAGTTTTTCTTCTACACGGTTTGCCCGGCTGCTaGCAGGAGTGTGGCGATATG | + |
|
Preference number: 4 (lower is better) Translates to: RSENFPQHHFTVVVFLLHGLPGC*QECGDM Trigger: CATATCGCCACACTCCTGTCAGCAGCCGGGCAAACC...GTGTAGAAGAAAAACTACAACCGTAAAATGATGCTGTGGGAAATTCTCAGATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR TCA 90 bp | TTATTTGCTCAACTCGCAGGGGATATGCATGTGCCAGGAGAGGTCAGATCATCACATCTACAGACTTCTTaGAGTGTGTCTGCAGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: LFAQLAGDMHVPGEVRSSHLQTS*SVSAAT Trigger: AGTTGCTGCAGACACACTTCAAGAAGTCTGTAGATG...TGATGATCTGACCTCTCCTGGCACATGCATATCCCCTGCGAGTTGAGCAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR TCA 90 bp | GAGACTGAGTTTATAGTTAACAAAGGGTGCTGCAGAGCAGTCTTCAGGCAGCTCAAAGAACCTAAACTGTaGCCAGCAACGGAGACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ETEFIVNKGCCRAVFRQLKEPKL*PATETF Trigger: AAAGGTCTCCGTTGCTGGTCACAGTTTAGGTTCTTT...GAGCTGCCTGAAGACTGCTCTGCAGCACCCTTTGTTAACTATAAACTCAGTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR GCA 90 bp | ACAGAAAGCTCCACTCACTGTGAAAGCCTGTTATTTGCTCAACTCGCAGGGGATCAAAGGGATCACTACTaGTTGAGACCTGAGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TESSTHCESLLFAQLAGDQRDHY*LRPERS Trigger: ACTTCTCTCAGGTCTCAAGCAGTAGTGATCCCTTTG...ATCCCCTGCGAGTTGAGCAAATAACAGGCTTTCACAGTGAGTGGAGCTTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR GCA 90 bp | AAAGGTACACATCGTAGCGTCCGCCATCCGTGCCTAGAACCACACTCTCAGGATTATATTCTACCTCCTTaGAATAAAACCAGTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KGTHRSVRHPCLEPHSQDYILPP*NKTSVA Trigger: AGCCACACTGGTTTTATTGCAAGGAGGTAGAATATA...ATCCTGAGAGTGTGGTTCTAGGCACGGATGGCGGACGCTACGATGTGTACCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205856.2 |
||
| CDS-3UTR GCA 90 bp | ACAGAAAGCTCCACTCACTGTGAAAGCCTGTTATTTGCTCAACTCGCAGGGGATGAACTGATAAAGCCCTaGTTCAGATCGGATCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: TESSTHCESLLFAQLAGDELIKP*FRSDPI Trigger: AATGGGATCCGATCTGAAGCAGGGCTTTATCAGTTC...ATCCCCTGCGAGTTGAGCAAATAACAGGCTTTCACAGTGAGTGGAGCTTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR CCA 90 bp | GAGACTGAGTTTATAGTTAACAAAGGGTGCTGCAGAGCAGTCTTCAGGCAGCTCGTAACTGAATGTCTGTaGCGTGGATGTGTGAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ETEFIVNKGCCRAVFRQLVTECL*RGCVSR Trigger: TCTACTCACACATCCACGCCACAGACATTCAGTTAC...GAGCTGCCTGAAGACTGCTCTGCAGCACCCTTTGTTAACTATAAACTCAGTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR CCA 90 bp | GAGACTGAGTTTATAGTTAACAAAGGGTGCTGCAGAGCAGTCTTCAGGCAGCTCGCAATAAAACCAGTGTaGCTGAACAGGTTCGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: ETEFIVNKGCCRAVFRQLAIKPV*LNRFVL Trigger: CAGTACGAACCTGTTCAGCCACACTGGTTTTATTGC...GAGCTGCCTGAAGACTGCTCTGCAGCACCCTTTGTTAACTATAAACTCAGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR TCA 90 bp | AGATCTGAGAATTTCCCACAGCATCATTTTACGGTTGTAGTTTTTCTTCTACACAAGGCGCTGTGCCAGTaGACTGGCAGGAACTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: RSENFPQHHFTVVVFLLHKALCQ*TGRNST Trigger: AGTGGAGTTCCTGCCAGTTCACTGGCACAGCGCCTT...GTGTAGAAGAAAAACTACAACCGTAAAATGATGCTGTGGGAAATTCTCAGATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR CCA 90 bp | CAGCATCATTTTACGGTTGTAGTTTTTCTTCTACACTGTTCAAATACAGTACTGGTGTGGCTGGGGGCTTaGGAAGTGCTGACTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QHHFTVVVFLLHCSNTVLVWLGA*EVLTVQ Trigger: CTGGACAGTCAGCACTTCCCAAGCCCCCAGCCACAC...CAGTACTGTATTTGAACAGTGTAGAAGAAAAACTACAACCGTAAAATGATGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR CCA 90 bp | AGATCTGAGAATTTCCCACAGCATCATTTTACGGTTGTAGTTTTTCTTCTACACGGTCCAGGCGGCATTTaGTATGTCTGCACAGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSENFPQHHFTVVVFLLHGPGGI*YVCTGG Trigger: ACCCCCTGTGCAGACATACCAAATGCCGCCTGGACC...GTGTAGAAGAAAAACTACAACCGTAAAATGATGCTGTGGGAAATTCTCAGATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR CCA 90 bp | GAGACTGAGTTTATAGTTAACAAAGGGTGCTGCAGAGCAGTCTTCAGGCAGCTCTCTTCCTCTTTGATTTaGTTGGCCACCTTCTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ETEFIVNKGCCRAVFRQLSSSLI*LATFSN Trigger: ATTGGAGAAGGTGGCCAACCAAATCAAAGAGGAAGA...GAGCTGCCTGAAGACTGCTCTGCAGCACCCTTTGTTAACTATAAACTCAGTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR CCA 90 bp | ACAGAAAGCTCCACTCACTGTGAAAGCCTGTTATTTGCTCAACTCGCAGGGGATAGTAGTCCTCGTCCTTaGAAAGTTCTGGACTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TESSTHCESLLFAQLAGDSSPRP*KVLDFQ Trigger: TTGAAAGTCCAGAACTTTCCAAGGACGAGGACTACT...ATCCCCTGCGAGTTGAGCAAATAACAGGCTTTCACAGTGAGTGGAGCTTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR GCA 90 bp | AGATCTGAGAATTTCCCACAGCATCATTTTACGGTTGTAGTTTTTCTTCTACACTGCTGTGCTGGTGACTaGATTGCTGTGGGAAGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSENFPQHHFTVVVFLLHCCAGD*IAVGSG Trigger: ACCGCTTCCCACAGCAATGCAGTCACCAGCACAGCA...GTGTAGAAGAAAAACTACAACCGTAAAATGATGCTGTGGGAAATTCTCAGATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR GCA 90 bp | ACAGAAAGCTCCACTCACTGTGAAAGCCTGTTATTTGCTCAACTCGCAGGGGATCAGAAACCTGTCCTGTaGCAACTTCAAAAGATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TESSTHCESLLFAQLAGDQKPVL*QLQKIH Trigger: ATGAATCTTTTGAAGTTGGCACAGGACAGGTTTCTG...ATCCCCTGCGAGTTGAGCAAATAACAGGCTTTCACAGTGAGTGGAGCTTTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR CCA 90 bp | AGATCTGAGAATTTCCCACAGCATCATTTTACGGTTGTAGTTTTTCTTCTACACGTGACTGCATTGCTGTaGGAAGCGGTGGCAATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RSENFPQHHFTVVVFLLHVTALL*EAVAMV Trigger: GACCATTGCCACCGCTTCCCACAGCAATGCAGTCAC...GTGTAGAAGAAAAACTACAACCGTAAAATGATGCTGTGGGAAATTCTCAGATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR CCA 90 bp | ACAGAAAGCTCCACTCACTGTGAAAGCCTGTTATTTGCTCAACTCGCAGGGGATCTTTCCTTTGAAGTTTaGGTTCCGACTCATAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TESSTHCESLLFAQLAGDLSFEV*VPTHKE Trigger: CTCTTTATGAGTCGGAACCCAAACTTCAAAGGAAAG...ATCCCCTGCGAGTTGAGCAAATAACAGGCTTTCACAGTGAGTGGAGCTTTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR TCA 90 bp | CAGCATCATTTTACGGTTGTAGTTTTTCTTCTACACTGTTCAAATACAGTACTGTTGCTGCTGTGCTGGTaGCTGCATTGCTGTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QHHFTVVVFLLHCSNTVLLLLCW*LHCCGK Trigger: CTTCCCACAGCAATGCAGTCACCAGCACAGCAGCAA...CAGTACTGTATTTGAACAGTGTAGAAGAAAAACTACAACCGTAAAATGATGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR GCA 90 bp | AGATCTGAGAATTTCCCACAGCATCATTTTACGGTTGTAGTTTTTCTTCTACACGAGAAGGCAAATAGGTaGTGGTGCCCATCTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RSENFPQHHFTVVVFLLHEKANR*WCPSVR Trigger: CCTCACAGATGGGCACCAGCACCTATTTGCCTTCTC...GTGTAGAAGAAAAACTACAACCGTAAAATGATGCTGTGGGAAATTCTCAGATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR GCA 90 bp | GAGACTGAGTTTATAGTTAACAAAGGGTGCTGCAGAGCAGTCTTCAGGCAGCTCTATATTCTACCTCCTTaGAATAAAACCAGTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ETEFIVNKGCCRAVFRQLYILPP*NKTSVA Trigger: AGCCACACTGGTTTTATTGCAAGGAGGTAGAATATA...GAGCTGCCTGAAGACTGCTCTGCAGCACCCTTTGTTAACTATAAACTCAGTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR TCA 90 bp | AGATCTGAGAATTTCCCACAGCATCATTTTACGGTTGTAGTTTTTCTTCTACACGGAACTCCACTCTGCTaGCTTTCCCTTCATCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: RSENFPQHHFTVVVFLLHGTPLC*LSLHLQ Trigger: CTGTAGATGAAGGGAAAGTCAGCAGAGTGGAGTTCC...GTGTAGAAGAAAAACTACAACCGTAAAATGATGCTGTGGGAAATTCTCAGATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR GCA 90 bp | AGAGGTCAGATCATCACAAGAGTTCTAGAAAGTAAAAAGTGCTTCACGGGCTGGATAACCTTTGGGTTGTaGATAACGATAGTCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGQIITRVLESKKCFTGWITFGL*ITIVSP Trigger: TGGAGAGACTATCGTTATGCACAACCCAAAGGTTAT...CCAGCCCGTGAAGCACTTTTTACTTTCTAGAACTCTTGTGATGATCTGACCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR CCA 90 bp | GATCTGGCTGCACTGAATTATAGATCTCTTCAAGATTCAAAGAGTCAAGCACACGCAATAAAACCAGTGTaGCTGAACAGGTTCGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: DLAALNYRSLQDSKSQAHAIKPV*LNRFVL Trigger: CAGTACGAACCTGTTCAGCCACACTGGTTTTATTGC...GTGTGCTTGACTCTTTGAATCTTGAAGAGATCTATAATTCAGTGCAGCCAGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205856.2 |
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| CDS-3UTR TCA 90 bp | CAGCATCATTTTACGGTTGTAGTTTTTCTTCTACACTGTTCAAATACAGTACTGCCTGAGAGAAGTAACTaGATGTCTGTGGCGTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: QHHFTVVVFLLHCSNTVLPERSN*MSVAWM Trigger: CATCCACGCCACAGACATTCAGTTACTTCTCTCAGG...CAGTACTGTATTTGAACAGTGTAGAAGAAAAACTACAACCGTAAAATGATGCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR TCA 90 bp | GGATATGCATGTGCCAGGAGAGGTCAGATCATCACAAGAGTTCTAGAAAGTAAACCTCTAGTTTTTCACTaGACTCCTCTGTATAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GYACARRGQIITRVLESKPLVFH*TPLYKE Trigger: TTCCTTATACAGAGGAGTTCAGTGAAAAACTAGAGG...TTTACTTTCTAGAACTCTTGTGATGATCTGACCTCTCCTGGCACATGCATATCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR TCA 90 bp | CAGCATCATTTTACGGTTGTAGTTTTTCTTCTACACTGTTCAAATACAGTACTGAGTCTGCGGTGCCACTaGTTTGTGCTTACAGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QHHFTVVVFLLHCSNTVLSLRCH*FVLTAF Trigger: AAAGGCTGTAAGCACAAATCAGTGGCACCGCAGACT...CAGTACTGTATTTGAACAGTGTAGAAGAAAAACTACAACCGTAAAATGATGCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR CCA 90 bp | CAGCATCATTTTACGGTTGTAGTTTTTCTTCTACACTGTTCAAATACAGTACTGTGGAGGGAGACTGCTTaGCTGAGAAGGCAAATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QHHFTVVVFLLHCSNTVLWRETA*LRRQIG Trigger: ACCTATTTGCCTTCTCAGCCAAGCAGTCTCCCTCCA...CAGTACTGTATTTGAACAGTGTAGAAGAAAAACTACAACCGTAAAATGATGCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR TCA 90 bp | CAGCATCATTTTACGGTTGTAGTTTTTCTTCTACACTGTTCAAATACAGTACTGGGTTCGTACTGGTTCTaGAGTACAAAAGGAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: QHHFTVVVFLLHCSNTVLGSYWF*STKGDG Trigger: GCCATCTCCTTTTGTACTTCAGAACCAGTACGAACC...CAGTACTGTATTTGAACAGTGTAGAAGAAAAACTACAACCGTAAAATGATGCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR CCA 90 bp | AGATCTGAGAATTTCCCACAGCATCATTTTACGGTTGTAGTTTTTCTTCTACACGAAGAAGGCTGGAACTaGACAATAACCTTTGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RSENFPQHHFTVVVFLLHEEGWN*TITFGL Trigger: CAACCCAAAGGTTATTGTCCAGTTCCAGCCTTCTTC...GTGTAGAAGAAAAACTACAACCGTAAAATGATGCTGTGGGAAATTCTCAGATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR GCA 90 bp | AGATCTGAGAATTTCCCACAGCATCATTTTACGGTTGTAGTTTTTCTTCTACACTTCTTGAAGTGTGTCTaGAGCAACTTGAGAGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: RSENFPQHHFTVVVFLLHFLKCV*SNLRET Trigger: GGTTTCTCTCAAGTTGCTGCAGACACACTTCAAGAA...GTGTAGAAGAAAAACTACAACCGTAAAATGATGCTGTGGGAAATTCTCAGATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR TCA 90 bp | CAGCATCATTTTACGGTTGTAGTTTTTCTTCTACACTGTTCAAATACAGTACTGTCTTTCAACTCTAAGTaGAGTCTCTTCCTGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QHHFTVVVFLLHCSNTVLSFNSK*SLFLPL Trigger: CAAAGGCAGGAAGAGACTTCACTTAGAGTTGAAAGA...CAGTACTGTATTTGAACAGTGTAGAAGAAAAACTACAACCGTAAAATGATGCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR GCA 90 bp | CAGCATCATTTTACGGTTGTAGTTTTTCTTCTACACTGTTCAAATACAGTACTGAATTCGTTGAGTGTCTaGCAAGCACTTTTCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QHHFTVVVFLLHCSNTVLNSLSV*QALFRE Trigger: TTCTCTGAAAAGTGCTTGGCAGACACTCAACGAATT...CAGTACTGTATTTGAACAGTGTAGAAGAAAAACTACAACCGTAAAATGATGCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR GCA 90 bp | AGATCTGAGAATTTCCCACAGCATCATTTTACGGTTGTAGTTTTTCTTCTACACCTGCTCCAGTTTGGCTaGTTTAAGTTTTACAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: RSENFPQHHFTVVVFLLHLLQFG*FKFYKI Trigger: AATTTTGTAAAACTTAAAGCAGCCAAACTGGAGCAG...GTGTAGAAGAAAAACTACAACCGTAAAATGATGCTGTGGGAAATTCTCAGATCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS GCA 90 bp | GATGGCCCCTGTACAAGGGGTCCTGCGGGTCTGGCAGGGACTTGCTaGTGTGCTGGTGACTGCATTGCTGTGGGAAGCGGTGGCAATGGT | + |
|
Preference number: 5 (lower is better) Translates to: DGPCTRGPAGLAGTC*CAGDCIAVGSGGNG Trigger: ACCATTGCCACCGCTTCCCACAGCAATGCAGTCACCAGCACAGCAGCAAGTCCCTGCCAGACCCGCAGGACCCCTTGTACAGGGGCCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR CAA 90 bp | GCCTGGGATGAGGAGGCCTTGTCACAAGCAGGAGCAACTCCACACCAGGGCAGCGGGATGAAGGGCACGTaGAAGCTGAACTCCGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AWDEEALSQAGATPHQGSGMKGT*KLNSVA Trigger: GGCCACGGAGTTCAGCTTCAACGTGCCCTTCATCCC...GCTGCCCTGGTGTGGAGTTGCTCCTGCTTGTGACAAGGCCTCCTCATCCCAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR CAA 90 bp | GCCTGGGATGAGGAGGCCTTGTCACAAGCAGGAGCAACTCCACACCAGGGCAGCGTGGGCTGCCAAAATTaGGAGGGAGACTGCTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AWDEEALSQAGATPHQGSVGCQN*EGDCLA Trigger: AGCCAAGCAGTCTCCCTCCAAATTTTGGCAGCCCAC...GCTGCCCTGGTGTGGAGTTGCTCCTGCTTGTGACAAGGCCTCCTCATCCCAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR CAA 90 bp | GCCTGGGATGAGGAGGCCTTGTCACAAGCAGGAGCAACTCCACACCAGGGCAGCAGCGTCTCACTTCAGTaGGCTCCTCTTCCCAGTACA | + |
|
Preference number: 5 (lower is better) Translates to: AWDEEALSQAGATPHQGSSVSLQ*APLPST Trigger: TGTACTGGGAAGAGGAGCCAACTGAAGTGAGACGCT...GCTGCCCTGGTGTGGAGTTGCTCCTGCTTGTGACAAGGCCTCCTCATCCCAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR CAA 90 bp | GCCTGGGATGAGGAGGCCTTGTCACAAGCAGGAGCAACTCCACACCAGGGCAGCACGGAGACCTTTCCTTaGAAGTTTGGGTTCCGACTC | + |
|
Preference number: 5 (lower is better) Translates to: AWDEEALSQAGATPHQGSTETFP*KFGFRL Trigger: GAGTCGGAACCCAAACTTCAAAGGAAAGGTCTCCGT...GCTGCCCTGGTGTGGAGTTGCTCCTGCTTGTGACAAGGCCTCCTCATCCCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS TCA 90 bp | GAGACTGCTTGGCTGAGAAGGCAAATAGGTGCTGGTGCCCATCTGTaGGGGAGGGGTAGCACCAGGAGCCTTGGAAACAGACGGTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: ETAWLRRQIGAGAHL*GRGSTRSLGNRRWK Trigger: TTTCCACCGTCTGTTTCCAAGGCTCCTGGTGCTACCCCTCCCTCACAGATGGGCACCAGCACCTATTTGCCTTCTCAGCCAAGCAGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS TCA 90 bp | CACACGGGCCCGATGCCGTGCACCATGAACACCAAGTGGTCAACCTaGGGCATCTCCCCATCAGGAATTTCATCGAGGCTGTCGTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: HTGPMPCTMNTKWST*GISPSGISSRLSSI Trigger: GATTGACGACAGCCTCGATGAAATTCCTGATGGGGAGATGCCTCAGGTTGACCACTTGGTGTTCATGGTGCACGGCATCGGGCCCGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS TCA 90 bp | TTCCTGTCAACACCCGTGGCATGCCCACCCAAGGCGCTGTGCCAGTaGACTGGCAGGAACTCCACTCTGCTGACTTTCCCTTCATCTACA | + |
|
Preference number: 5 (lower is better) Translates to: FLSTPVACPPKALCQ*TGRNSTLLTFPSST Trigger: TGTAGATGAAGGGAAAGTCAGCAGAGTGGAGTTCCTGCCAGTTCACTGGCACAGCGCCTTGGGTGGGCATGCCACGGGTGTTGACAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS CCA 90 bp | GTCAACACCCGTGGCATGCCCACCCAAGGCGCTGTGCCAGTGAACTaGCAGGAACTCCACTCTGCTGACTTTCCCTTCATCTACAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: VNTRGMPTQGAVPVN*QELHSADFPFIYRL Trigger: AAGTCTGTAGATGAAGGGAAAGTCAGCAGAGTGGAGTTCCTGCCAGTTCACTGGCACAGCGCCTTGGGTGGGCATGCCACGGGTGTTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS CCA 90 bp | TCGTCAATCCCGCGTTTTACAACTCTTGGCCTTGTCTGTCCGTCTTaGGTCGTCCCCCACTCATCTGGCACTGAAGAAGGCTGGAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSIPRFTTLGLVCPS*VVPHSSGTEEGWNW Trigger: CCAGTTCCAGCCTTCTTCAGTGCCAGATGAGTGGGGGACGACCCAAGACGGACAGACAAGGCCAAGAGTTGTAAAACGCGGGATTGACGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR CAA 90 bp | GCCTGGGATGAGGAGGCCTTGTCACAAGCAGGAGCAACTCCACACCAGGGCAGCTGCGGTGCCACTGATTaGTGCTTACAGCCTTTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: AWDEEALSQAGATPHQGSCGATD*CLQPFY Trigger: ATAAAAAGGCTGTAAGCACAAATCAGTGGCACCGCA...GCTGCCCTGGTGTGGAGTTGCTCCTGCTTGTGACAAGGCCTCCTCATCCCAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR CAA 90 bp | GCCTGGGATGAGGAGGCCTTGTCACAAGCAGGAGCAACTCCACACCAGGGCAGCCTTCTCCAATTCTTCTaGCAGCTGAGTAGTAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: AWDEEALSQAGATPHQGSLLQFF*QLSSRG Trigger: ACCTCTACTACTCAGCTGCAAGAAGAATTGGAGAAG...GCTGCCCTGGTGTGGAGTTGCTCCTGCTTGTGACAAGGCCTCCTCATCCCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS CCA 90 bp | AGGAATTTCATCGAGGCTGTCGTCAATCCCGCGTTTTACAACTCTTaGCCTTGTCTGTCCGTCTTGGGTCGTCCCCCACTCATCTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RNFIEAVVNPAFYNS*PCLSVLGRPPLIWH Trigger: GTGCCAGATGAGTGGGGGACGACCCAAGACGGACAGACAAGGCCAAGAGTTGTAAAACGCGGGATTGACGACAGCCTCGATGAAATTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS TCA 90 bp | TGGCCTTGTCTGTCCGTCTTGGGTCGTCCCCCACTCATCTGGCACTaGAGAAGGCTGGAACTGGACAATAACCTTTGGGTTGTGCATAAC | + |
|
Preference number: 5 (lower is better) Translates to: WPCLSVLGRPPLIWH*RRLELDNNLWVVHN Trigger: GTTATGCACAACCCAAAGGTTATTGTCCAGTTCCAGCCTTCTTCAGTGCCAGATGAGTGGGGGACGACCCAAGACGGACAGACAAGGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS GCA 90 bp | GTCTCACTTCAGTTGGCTCCTCTTCCCAGTACACAGACTTCCTCATaGGGTCATAAAGGTACACATCGTAGCGTCCGCCATCCGTGCCTA | + |
|
Preference number: 5 (lower is better) Translates to: VSLQLAPLPSTQTSS*GHKGTHRSVRHPCL Trigger: TAGGCACGGATGGCGGACGCTACGATGTGTACCTTTATGACCGCATGAGGAAGTCTGTGTACTGGGAAGAGGAGCCAACTGAAGTGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR CAA 90 bp | TCCACTCACTGTGAAAGCCTGTTATTTGCTCAACTCGCAGGGGATATGCATGTGCCTTGTCTGTCCGTCTaGGGTCGTCCCCCACTCATC | + |
|
Preference number: 5 (lower is better) Translates to: STHCESLLFAQLAGDMHVPCLSV*GRPPLI Trigger: GATGAGTGGGGGACGACCCAAGACGGACAGACAAGG...CACATGCATATCCCCTGCGAGTTGAGCAAATAACAGGCTTTCACAGTGAGTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS TCA 90 bp | ACTGCTGTAGCTGTGGAGGTGTTATATAGGGGTTTGCCCGGCTGCTaGCAGGAGTGTGGCGATATGGGTTATGTCCTTGTTGAGGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: TAVAVEVLYRGLPGC*QECGDMGYVLVEES Trigger: GGATTCCTCAACAAGGACATAACCCATATCGCCACACTCCTGTCAGCAGCCGGGCAAACCCCTATATAACACCTCCACAGCTACAGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR CAA 90 bp | GAGACTGAGTTTATAGTTAACAAAGGGTGCTGCAGAGCAGTCTTCAGGCAGCTCCGCACTCAGCGCATCTaGGGAGCCGGTTGTAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: ETEFIVNKGCCRAVFRQLRTQRI*GAGCKS Trigger: GCTTTTACAACCGGCTCCCAAGATGCGCTGAGTGCG...GAGCTGCCTGAAGACTGCTCTGCAGCACCCTTTGTTAACTATAAACTCAGTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR CAA 90 bp | ACAGAAAGCTCCACTCACTGTGAAAGCCTGTTATTTGCTCAACTCGCAGGGGATGTAGCACCAGGAGCCTaGGAAACAGACGGTGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TESSTHCESLLFAQLAGDVAPGA*ETDGGN Trigger: GTTTCCACCGTCTGTTTCCAAGGCTCCTGGTGCTAC...ATCCCCTGCGAGTTGAGCAAATAACAGGCTTTCACAGTGAGTGGAGCTTTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR CAA 90 bp | TCCACTCACTGTGAAAGCCTGTTATTTGCTCAACTCGCAGGGGATATGCATGTGTGGGTTATGTCCTTGTaGAGGAATCCCCTGGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: STHCESLLFAQLAGDMHVWVMSL*RNPLGW Trigger: CCACCCCAGGGGATTCCTCAACAAGGACATAACCCA...CACATGCATATCCCCTGCGAGTTGAGCAAATAACAGGCTTTCACAGTGAGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR CAA 90 bp | TCCACTCACTGTGAAAGCCTGTTATTTGCTCAACTCGCAGGGGATATGCATGTGACTGTCCAGCTGACATaGCTGAAGTCGTCAAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: STHCESLLFAQLAGDMHVTVQLT*LKSSRV Trigger: CACCCTTGACGACTTCAGCAATGTCAGCTGGACAGT...CACATGCATATCCCCTGCGAGTTGAGCAAATAACAGGCTTTCACAGTGAGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR CAA 90 bp | CAGGATCTGGCTGCACTGAATTATAGATCTCTTCAAGATTCAAAGAGTCAAGCAGGGATGAAGGGCACGTaGAAGCTGAACTCCGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QDLAALNYRSLQDSKSQAGMKGT*KLNSVA Trigger: GGCCACGGAGTTCAGCTTCAACGTGCCCTTCATCCC...TGCTTGACTCTTTGAATCTTGAAGAGATCTATAATTCAGTGCAGCCAGATCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205856.2 |
||
| CDS CCA 90 bp | CTGGACAATAACCTTTGGGTTGTGCATAACGATAGTCTCTCCACTTaGAAACTCCAGTCTGCGGTGCCACTGATTTGTGCTTACAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LDNNLWVVHNDSLST*KLQSAVPLICAYSL Trigger: AAGGCTGTAAGCACAAATCAGTGGCACCGCAGACTGGAGTTTCCAAGTGGAGAGACTATCGTTATGCACAACCCAAAGGTTATTGTCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR CAA 90 bp | AGAGGTCAGATCATCACAAGAGTTCTAGAAAGTAAAAAGTGCTTCACGGGCTGGTTGGAGGGAGACTGCTaGGCTGAGAAGGCAAATAGG | + |
|
Preference number: 5 (lower is better) Translates to: RGQIITRVLESKKCFTGWLEGDC*AEKANR Trigger: CCTATTTGCCTTCTCAGCCAAGCAGTCTCCCTCCAA...CCAGCCCGTGAAGCACTTTTTACTTTCTAGAACTCTTGTGATGATCTGACCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS GCA 90 bp | TCGTTGAGTGTCTGCCAAGCACTTTTCAGAGAACTGATAAAGCCCTaGTTCAGATCGGATCCCATTCGAGAAAGGCTCTCTTTCAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLSVCQALFRELIKP*FRSDPIRERLSFNS Trigger: AGAGTTGAAAGAGAGCCTTTCTCGAATGGGATCCGATCTGAAGCAGGGCTTTATCAGTTCTCTGAAAAGTGCTTGGCAGACACTCAACGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR CAA 90 bp | AGAGGTCAGATCATCACAAGAGTTCTAGAAAGTAAAAAGTGCTTCACGGGCTGGCGCGTTTTACAACTCTaGGCCTTGTCTGTCCGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RGQIITRVLESKKCFTGWRVLQL*ALSVRL Trigger: AAGACGGACAGACAAGGCCAAGAGTTGTAAAACGCG...CCAGCCCGTGAAGCACTTTTTACTTTCTAGAACTCTTGTGATGATCTGACCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR CAA 90 bp | TCCACTCACTGTGAAAGCCTGTTATTTGCTCAACTCGCAGGGGATATGCATGTGTCCTCTTGGACTCGTTaGATTCTGAAGATGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: STHCESLLFAQLAGDMHVSSWTR*ILKMEK Trigger: CTTCTCCATCTTCAGAATCAAACGAGTCCAAGAGGA...CACATGCATATCCCCTGCGAGTTGAGCAAATAACAGGCTTTCACAGTGAGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR CAA 90 bp | ACAGAAAGCTCCACTCACTGTGAAAGCCTGTTATTTGCTCAACTCGCAGGGGATACTGAGAGCTTCCTCTaGGACTCGTTTGATTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: TESSTHCESLLFAQLAGDTESFL*DSFDSE Trigger: TTCAGAATCAAACGAGTCCAAGAGGAAGCTCTCAGT...ATCCCCTGCGAGTTGAGCAAATAACAGGCTTTCACAGTGAGTGGAGCTTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR CAA 90 bp | GAGACTGAGTTTATAGTTAACAAAGGGTGCTGCAGAGCAGTCTTCAGGCAGCTCTCCTCTTTGATTTGGTaGGCCACCTTCTCCAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: ETEFIVNKGCCRAVFRQLSSLIW*ATFSNS Trigger: AGAATTGGAGAAGGTGGCCAACCAAATCAAAGAGGA...GAGCTGCCTGAAGACTGCTCTGCAGCACCCTTTGTTAACTATAAACTCAGTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR CAA 90 bp | GAGACTGAGTTTATAGTTAACAAAGGGTGCTGCAGAGCAGTCTTCAGGCAGCTCTTTTCCTCTTCCTCTTaGATTTGGTTGGCCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ETEFIVNKGCCRAVFRQLFSSSS*IWLATF Trigger: GAAGGTGGCCAACCAAATCAAAGAGGAAGAGGAAAA...GAGCTGCCTGAAGACTGCTCTGCAGCACCCTTTGTTAACTATAAACTCAGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR CAA 90 bp | CAGCATCATTTTACGGTTGTAGTTTTTCTTCTACACTGTTCAAATACAGTACTGAGTGTGGCTGGGGGCTaGGGAAGTGCTGACTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QHHFTVVVFLLHCSNTVLSVAGG*GSADCP Trigger: TGGACAGTCAGCACTTCCCAAGCCCCCAGCCACACT...CAGTACTGTATTTGAACAGTGTAGAAGAAAAACTACAACCGTAAAATGATGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS-3UTR CAA 90 bp | GGATATGCATGTGCCAGGAGAGGTCAGATCATCACAAGAGTTCTAGAAAGTAAAATATGGGTTATGTCCTaGTTGAGGAATCCCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GYACARRGQIITRVLESKIWVMS*LRNPLG Trigger: CCCCAGGGGATTCCTCAACAAGGACATAACCCATAT...TTTACTTTCTAGAACTCTTGTGATGATCTGACCTCTCCTGGCACATGCATATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR CAA 90 bp | AGAGGTCAGATCATCACAAGAGTTCTAGAAAGTAAAAAGTGCTTCACGGGCTGGCTCTTCCTCTTTGATTaGGTTGGCCACCTTCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: RGQIITRVLESKKCFTGWLFLFD*VGHLLQ Trigger: TTGGAGAAGGTGGCCAACCAAATCAAAGAGGAAGAG...CCAGCCCGTGAAGCACTTTTTACTTTCTAGAACTCTTGTGATGATCTGACCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS TCA 90 bp | ATAACGATAGTCTCTCCACTTGGAAACTCCAGTCTGCGGTGCCACTaGTTTGTGCTTACAGCCTTTTTATACTCGGCCTCTAGTTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ITIVSPLGNSSLRCH*FVLTAFLYSASSFS Trigger: TGAAAAACTAGAGGCCGAGTATAAAAAGGCTGTAAGCACAAATCAGTGGCACCGCAGACTGGAGTTTCCAAGTGGAGAGACTATCGTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS GCA 90 bp | ACTCTGCTGACTTTCCCTTCATCTACAGACTTCTTGAAGTGTGTCTaGAGCAACTTGAGAGAAACCACCCTAAAATCATCCACACATTCG | + |
|
Preference number: 5 (lower is better) Translates to: TLLTFPSSTDFLKCV*SNLRETTLKSSTHS Trigger: CGAATGTGTGGATGATTTTAGGGTGGTTTCTCTCAAGTTGCTGCAGACACACTTCAAGAAGTCTGTAGATGAAGGGAAAGTCAGCAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR CAA 90 bp | AGAGGTCAGATCATCACAAGAGTTCTAGAAAGTAAAAAGTGCTTCACGGGCTGGGGCAAGGTAATTTTCTaGATGTTCCTGTCAACACCC | + |
|
Preference number: 5 (lower is better) Translates to: RGQIITRVLESKKCFTGWGKVIF*MFLSTP Trigger: GGGTGTTGACAGGAACATCAAGAAAATTACCTTGCC...CCAGCCCGTGAAGCACTTTTTACTTTCTAGAACTCTTGTGATGATCTGACCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR CAA 90 bp | AGAGGTCAGATCATCACAAGAGTTCTAGAAAGTAAAAAGTGCTTCACGGGCTGGCATCTGACATCAGCTTaGACTCTTCAGATATCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RGQIITRVLESKKCFTGWHLTSA*TLQISA Trigger: AGCTGATATCTGAAGAGTCAAAGCTGATGTCAGATG...CCAGCCCGTGAAGCACTTTTTACTTTCTAGAACTCTTGTGATGATCTGACCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR CAA 90 bp | AGAGGTCAGATCATCACAAGAGTTCTAGAAAGTAAAAAGTGCTTCACGGGCTGGTTCTGCTTCAACTACTaGCTTTTCCTCTTCCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RGQIITRVLESKKCFTGWFCFNY*LFLFLF Trigger: AAAGAGGAAGAGGAAAAGCAAGTAGTTGAAGCAGAA...CCAGCCCGTGAAGCACTTTTTACTTTCTAGAACTCTTGTGATGATCTGACCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR CAA 90 bp | AGAGGTCAGATCATCACAAGAGTTCTAGAAAGTAAAAAGTGCTTCACGGGCTGGCTCGATTGGCTTTTCTaGAAGAACATAATCAATCCG | + |
|
Preference number: 5 (lower is better) Translates to: RGQIITRVLESKKCFTGWLDWLF*KNIINP Trigger: CGGATTGATTATGTTCTTCAAGAAAAGCCAATCGAG...CCAGCCCGTGAAGCACTTTTTACTTTCTAGAACTCTTGTGATGATCTGACCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS TCA 90 bp | ATCCCCAATAGCATAAGTGACTCTGAAGAGCGAAGAGATACTCATTaGAACTCTCGATTGGCTTTTCTTGAAGAACATAATCAATCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: IPNSISDSEERRDTH*NSRLAFLEEHNQSG Trigger: GCCGGATTGATTATGTTCTTCAAGAAAAGCCAATCGAGAGTTTCAATGAGTATCTCTTCGCTCTTCAGAGTCACTTATGCTATTGGGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS CCA 90 bp | GGCCTCCATTTAACATTCCAACCTTTCCTAAGTAGTCCTCGTCCTTaGAAAGTTCTGGACTTTCAACAATCTTTTCTGCTTCAACTACTT | + |
|
Preference number: 5 (lower is better) Translates to: GLHLTFQPFLSSPRP*KVLDFQQSFLLQLL Trigger: AAGTAGTTGAAGCAGAAAAGATTGTTGAAAGTCCAGAACTTTCCAAGGACGAGGACTACTTAGGAAAGGTTGGAATGTTAAATGGAGGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR CAA 90 bp | AGAGGTCAGATCATCACAAGAGTTCTAGAAAGTAAAAAGTGCTTCACGGGCTGGTTTTTCTGCTCCAGTTaGGCTGCTTTAAGTTTTACA | + |
|
Preference number: 5 (lower is better) Translates to: RGQIITRVLESKKCFTGWFFCSS*AALSFT Trigger: TGTAAAACTTAAAGCAGCCAAACTGGAGCAGAAAAA...CCAGCCCGTGAAGCACTTTTTACTTTCTAGAACTCTTGTGATGATCTGACCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR CAA 90 bp | CAGCATCATTTTACGGTTGTAGTTTTTCTTCTACACTGTTCAAATACAGTACTGAGGGATCACTACTGCTaGAGACCTGAGAGAAGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: QHHFTVVVFLLHCSNTVLRDHYC*RPERSN Trigger: GTTACTTCTCTCAGGTCTCAAGCAGTAGTGATCCCT...CAGTACTGTATTTGAACAGTGTAGAAGAAAAACTACAACCGTAAAATGATGCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR CAA 90 bp | AGATCTGAGAATTTCCCACAGCATCATTTTACGGTTGTAGTTTTTCTTCTACACTGTGTCTGCAGCAACTaGAGAGAAACCACCCTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: RSENFPQHHFTVVVFLLHCVCSN*RETTLK Trigger: TTTTAGGGTGGTTTCTCTCAAGTTGCTGCAGACACA...GTGTAGAAGAAAAACTACAACCGTAAAATGATGCTGTGGGAAATTCTCAGATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS-3UTR CAA 90 bp | CAGCATCATTTTACGGTTGTAGTTTTTCTTCTACACTGTTCAAATACAGTACTGTCATCTACAGACTTCTaGAAGTGTGTCTGCAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: QHHFTVVVFLLHCSNTVLSSTDF*KCVCSN Trigger: GTTGCTGCAGACACACTTCAAGAAGTCTGTAGATGA...CAGTACTGTATTTGAACAGTGTAGAAGAAAAACTACAACCGTAAAATGATGCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS TCA 90 bp | GATTCATCTGACATCAGCTTTGACTCTTCAGATATCAGCTTTTCCTaGAACTGTGAATGCTTTATAACTCCATTAGAAACAGCCACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: DSSDISFDSSDISFS*NCECFITPLETATD Trigger: ATCTGTGGCTGTTTCTAATGGAGTTATAAAGCATTCACAGTTTCAGGAAAAGCTGATATCTGAAGAGTCAAAGCTGATGTCAGATGAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS TCA 90 bp | GCACTGAATTATAGATCTCTTCAAGATTCAAAGAGTCAAGCACACTaGAAGGCATCCATAGCTGTTTATATTCTACCTCCTTGCAATAAA | + |
|
Preference number: 5 (lower is better) Translates to: ALNYRSLQDSKSQAH*KASIAVYILPPCNK Trigger: TTTATTGCAAGGAGGTAGAATATAAACAGCTATGGATGCCTTTCAGTGTGCTTGACTCTTTGAATCTTGAAGAGATCTATAATTCAGTGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS CAA 72 bp | GAGGCGGCGGCCTGCGTGACGGGGATGAAGGGCACGTaGAAGCTGAACTCCGTGGCCGAGGAGGAGAAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: EAAACVTGMKGT*KLNSVAEEEKS Trigger: ACTCTTCTCCTCCTCGGCCACGGAGTTCAGCTTCAACGTGCCCTTCATCCCCGTCACGCAGGCCGCCGCCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042942.10 ENSMUST00000205856.2 |
||
| CDS CAA 90 bp | GAAGCCGGGGAGGCGGCGGCCTGCGTGACGGGGATGAAGGGCACGTaGAAGCTGAACTCCGTGGCCGAGGAGGAGAAGAGTAAGTTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: EAGEAAACVTGMKGT*KLNSVAEEEKSKLV Trigger: CACTAACTTACTCTTCTCCTCCTCGGCCACGGAGTTCAGCTTCAACGTGCCCTTCATCCCCGTCACGCAGGCCGCCGCCTCCCCGGCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042942.10 ENSMUST00000205856.2 |
||
| CDS CAA 72 bp | TGCTGTGGGAAGCGGTGGCAATGGTCCAGGCGGCATTaGGTATGTCTGCACAGGGGGTCCAGAAGGCGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: CCGKRWQWSRRH*VCLHRGSRRRR Trigger: CCTCCGCCTTCTGGACCCCCTGTGCAGACATACCAAATGCCGCCTGGACCATTGCCACCGCTTCCCACAGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS TCA 72 bp | AGCGCAGGTCACACACGGGCCCGATGCCGTGCACCATaGACACCAAGTGGTCAACCTGAGGCATCTCCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SAGHTRARCRAP*TPSGQPEASPH Trigger: ATGGGGAGATGCCTCAGGTTGACCACTTGGTGTTCATGGTGCACGGCATCGGGCCCGTGTGTGACCTGCGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
||
| CDS GCA 72 bp | TGTACAAGGGGTCCTGCGGGTCTGGCAGGGACTTGCTaGTGTGCTGGTGACTGCATTGCTGTGGGAAGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: CTRGPAGLAGTC*CAGDCIAVGSG Trigger: ACCGCTTCCCACAGCAATGCAGTCACCAGCACAGCAGCAAGTCCCTGCCAGACCCGCAGGACCCCTTGTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS GCA 72 bp | TGTACAAGGGGTCCTGCGGGTCTGGCAGGGACTTGCTaGTGTGCTGGTGACTGCATTGCTGTGGGAAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: CTRGPAGLAGTC*CAGDCIAVGSS Trigger: GGAGCTTCCCACAGCAATGCAGTCACCAGCACAGCAGCAAGTCCCTGCCAGACCCGCAGGACCCCTTGTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205856.2 |
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| CDS CCA 72 bp | CAGGGACTTGCTGCTGTGCTGGTGACTGCATTGCTGTaGGAAGCGGTGGCAATGGTCCAGGCGGCATTTGGT | + |
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Preference number: 6 (lower is better) Translates to: QGLAAVLVTALL*EAVAMVQAAFG Trigger: ACCAAATGCCGCCTGGACCATTGCCACCGCTTCCCACAGCAATGCAGTCACCAGCACAGCAGCAAGTCCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS CCA 72 bp | CGTGGCATGCCCACCCAAGGCGCTGTGCCAGTGAACTaGCAGGAACTCCACTCTGCTGACTTTCCCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: RGMPTQGAVPVN*QELHSADFPFI Trigger: GATGAAGGGAAAGTCAGCAGAGTGGAGTTCCTGCCAGTTCACTGGCACAGCGCCTTGGGTGGGCATGCCACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS CAA 72 bp | CTTGGAAACAGACGGTGGAAACGCACTCAGCGCATCTaGGGAGCCGGTTGTAAAAGCGAGTGTGGCTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: LGNRRWKRTQRI*GAGCKSECGWG Trigger: CCCCCAGCCACACTCGCTTTTACAACCGGCTCCCAAGATGCGCTGAGTGCGTTTCCACCGTCTGTTTCCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042942.10 ENSMUST00000206986.2 |
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| CDS CCA 72 bp | TCTGACCAAGGAAACTATCCTCCTCGCCAACATCTGTaGAGTCTTCTCCGGGTAAGAGCAGGGAAGCCGGGG | + |
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Preference number: 6 (lower is better) Translates to: SDQGNYPPRQHL*SLLRVRAGKPG Trigger: CCCCGGCTTCCCTGCTCTTACCCGGAGAAGACTCCACAGATGTTGGCGAGGAGGATAGTTTCCTTGGTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS CCA 72 bp | CTGGGGTGGGCTGCCAAAATTTGGAGGGAGACTGCTTaGCTGAGAAGGCAAATAGGTGCTGGTGCCCATCTG | + |
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Preference number: 6 (lower is better) Translates to: LGWAAKIWRETA*LRRQIGAGAHL Trigger: CAGATGGGCACCAGCACCTATTTGCCTTCTCAGCCAAGCAGTCTCCCTCCAAATTTTGGCAGCCCACCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS CCA 72 bp | CCGCGTTTTACAACTCTTGGCCTTGTCTGTCCGTCTTaGGTCGTCCCCCACTCATCTGGCACTGAAGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: PRFTTLGLVCPS*VVPHSSGTEEG Trigger: GCCTTCTTCAGTGCCAGATGAGTGGGGGACGACCCAAGACGGACAGACAAGGCCAAGAGTTGTAAAACGCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS CCA 72 bp | ATCGAGGCTGTCGTCAATCCCGCGTTTTACAACTCTTaGCCTTGTCTGTCCGTCTTGGGTCGTCCCCCACTC | + |
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Preference number: 6 (lower is better) Translates to: IEAVVNPAFYNS*PCLSVLGRPPL Trigger: GAGTGGGGGACGACCCAAGACGGACAGACAAGGCCAAGAGTTGTAAAACGCGGGATTGACGACAGCCTCGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS CAA 72 bp | TGGGAGCCGGTTGTAAAAGCGAGTGTGGCTGGGGGCTaGGGAAGTGCTGACTGTCCAGCTGACATTGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: WEPVVKASVAGG*GSADCPADIAE Trigger: TTCAGCAATGTCAGCTGGACAGTCAGCACTTCCCAAGCCCCCAGCCACACTCGCTTTTACAACCGGCTCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS CAA 72 bp | CCTGGGGTGGGCTGCCAAAATTTGGAGGGAGACTGCTaGGCTGAGAAGGCAAATAGGTGCTGGTGCCCATCT | + |
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Preference number: 6 (lower is better) Translates to: PGVGCQNLEGDC*AEKANRCWCPS Trigger: AGATGGGCACCAGCACCTATTTGCCTTCTCAGCCAAGCAGTCTCCCTCCAAATTTTGGCAGCCCACCCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS CAA 72 bp | CATCGAGGCTGTCGTCAATCCCGCGTTTTACAACTCTaGGCCTTGTCTGTCCGTCTTGGGTCGTCCCCCACT | + |
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Preference number: 6 (lower is better) Translates to: HRGCRQSRVLQL*ALSVRLGSSPT Trigger: AGTGGGGGACGACCCAAGACGGACAGACAAGGCCAAGAGTTGTAAAACGCGGGATTGACGACAGCCTCGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS CAA 90 bp | CGAGTGTGGCTGGGGGCTTGGGAAGTGCTGACTGTCCAGCTGACATaGCTGAAGTCGTCAAGGGTGACTGTCCAATGTTCCCAAAGGGAT | + |
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Preference number: 6 (lower is better) Translates to: RVWLGAWEVLTVQLT*LKSSRVTVQCSQRD Trigger: ATCCCTTTGGGAACATTGGACAGTCACCCTTGACGACTTCAGCAATGTCAGCTGGACAGTCAGCACTTCCCAAGCCCCCAGCCACACTCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS TCA 72 bp | CCGATGCCGTGCACCATGAACACCAAGTGGTCAACCTaGGGCATCTCCCCATCAGGAATTTCATCGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PMPCTMNTKWST*GISPSGISSRL Trigger: CAGCCTCGATGAAATTCCTGATGGGGAGATGCCTCAGGTTGACCACTTGGTGTTCATGGTGCACGGCATCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS CAA 90 bp | TTTCATCGAGGCTGTCGTCAATCCCGCGTTTTACAACTCTTGGCCTaGTCTGTCCGTCTTGGGTCGTCCCCCACTCATCTGGCACTGAAG | + |
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Preference number: 6 (lower is better) Translates to: FHRGCRQSRVLQLLA*SVRLGSSPTHLALK Trigger: CTTCAGTGCCAGATGAGTGGGGGACGACCCAAGACGGACAGACAAGGCCAAGAGTTGTAAAACGCGGGATTGACGACAGCCTCGATGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS CAA 90 bp | CAGGAATTTCATCGAGGCTGTCGTCAATCCCGCGTTTTACAACTCTaGGCCTTGTCTGTCCGTCTTGGGTCGTCCCCCACTCATCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: QEFHRGCRQSRVLQL*ALSVRLGSSPTHLA Trigger: TGCCAGATGAGTGGGGGACGACCCAAGACGGACAGACAAGGCCAAGAGTTGTAAAACGCGGGATTGACGACAGCCTCGATGAAATTCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS TCA 72 bp | CTGTCCGTCTTGGGTCGTCCCCCACTCATCTGGCACTaGAGAAGGCTGGAACTGGACAATAACCTTTGGGTT | + |
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Preference number: 6 (lower is better) Translates to: LSVLGRPPLIWH*RRLELDNNLWV Trigger: AACCCAAAGGTTATTGTCCAGTTCCAGCCTTCTTCAGTGCCAGATGAGTGGGGGACGACCCAAGACGGACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS GCA 72 bp | CAGTTGGCTCCTCTTCCCAGTACACAGACTTCCTCATaGGGTCATAAAGGTACACATCGTAGCGTCCGCCAT | + |
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Preference number: 6 (lower is better) Translates to: QLAPLPSTQTSS*GHKGTHRSVRH Trigger: ATGGCGGACGCTACGATGTGTACCTTTATGACCGCATGAGGAAGTCTGTGTACTGGGAAGAGGAGCCAACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS CCA 72 bp | TGGGTCGTCCCCCACTCATCTGGCACTGAAGAAGGCTaGAACTGGACAATAACCTTTGGGTTGTGCATAACG | + |
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Preference number: 6 (lower is better) Translates to: WVVPHSSGTEEG*NWTITFGLCIT Trigger: CGTTATGCACAACCCAAAGGTTATTGTCCAGTTCCAGCCTTCTTCAGTGCCAGATGAGTGGGGGACGACCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS TCA 72 bp | GTCTCTCCACTTGGAAACTCCAGTCTGCGGTGCCACTaGTTTGTGCTTACAGCCTTTTTATACTCGGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: VSPLGNSSLRCH*FVLTAFLYSAS Trigger: AGAGGCCGAGTATAAAAAGGCTGTAAGCACAAATCAGTGGCACCGCAGACTGGAGTTTCCAAGTGGAGAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS CAA 90 bp | TTCCTCTTCCTCTTTGATTTGGTTGGCCACCTTCTCCAATTCTTCTaGCAGCTGAGTAGTAGAGGTGTGAGCACGCGCGAATTCGTTGAG | + |
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Preference number: 6 (lower is better) Translates to: FLFLFDLVGHLLQFF*QLSSRGVSTREFVE Trigger: CTCAACGAATTCGCGCGTGCTCACACCTCTACTACTCAGCTGCAAGAAGAATTGGAGAAGGTGGCCAACCAAATCAAAGAGGAAGAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS CCA 72 bp | AACCTTTGGGTTGTGCATAACGATAGTCTCTCCACTTaGAAACTCCAGTCTGCGGTGCCACTGATTTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: NLWVVHNDSLST*KLQSAVPLICA Trigger: AGCACAAATCAGTGGCACCGCAGACTGGAGTTTCCAAGTGGAGAGACTATCGTTATGCACAACCCAAAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS CAA 72 bp | CTCCACTTGGAAACTCCAGTCTGCGGTGCCACTGATTaGTGCTTACAGCCTTTTTATACTCGGCCTCTAGTT | + |
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Preference number: 6 (lower is better) Translates to: LHLETPVCGATD*CLQPFYTRPLV Trigger: AACTAGAGGCCGAGTATAAAAAGGCTGTAAGCACAAATCAGTGGCACCGCAGACTGGAGTTTCCAAGTGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS CAA 90 bp | GGCAGGAACTCCACTCTGCTGACTTTCCCTTCATCTACAGACTTCTaGAAGTGTGTCTGCAGCAACTTGAGAGAAACCACCCTAAAATCA | + |
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Preference number: 6 (lower is better) Translates to: GRNSTLLTFPSSTDF*KCVCSNLRETTLKS Trigger: TGATTTTAGGGTGGTTTCTCTCAAGTTGCTGCAGACACACTTCAAGAAGTCTGTAGATGAAGGGAAAGTCAGCAGAGTGGAGTTCCTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS CAA 72 bp | TCCACTCTGCTGACTTTCCCTTCATCTACAGACTTCTaGAAGTGTGTCTGCAGCAACTTGAGAGAAACCACC | + |
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Preference number: 6 (lower is better) Translates to: STLLTFPSSTDF*KCVCSNLRETT Trigger: GGTGGTTTCTCTCAAGTTGCTGCAGACACACTTCAAGAAGTCTGTAGATGAAGGGAAAGTCAGCAGAGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS CCA 72 bp | AGTCTCATTGGTAAAGTGACGGAACCGACCGATACTTaGCAAGGTAATTTTCTTGATGTTCCTGTCAACACC | + |
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Preference number: 6 (lower is better) Translates to: SLIGKVTEPTDT*QGNFLDVPVNT Trigger: GGTGTTGACAGGAACATCAAGAAAATTACCTTGCCAAGTATCGGTCGGTTCCGTCACTTTACCAATGAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS GCA 72 bp | ACTTTCCCTTCATCTACAGACTTCTTGAAGTGTGTCTaGAGCAACTTGAGAGAAACCACCCTAAAATCATCC | + |
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Preference number: 6 (lower is better) Translates to: TFPSSTDFLKCV*SNLRETTLKSS Trigger: GGATGATTTTAGGGTGGTTTCTCTCAAGTTGCTGCAGACACACTTCAAGAAGTCTGTAGATGAAGGGAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS TCA 72 bp | GACAATATGTCAAACAGTATCAAAGAACCTAAACTGTaGCCAGCAACGGAGACCTTTCCTTTGAAGTTTGGG | + |
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Preference number: 6 (lower is better) Translates to: DNMSNSIKEPKL*PATETFPLKFG Trigger: CCCAAACTTCAAAGGAAAGGTCTCCGTTGCTGGTCACAGTTTAGGTTCTTTGATACTGTTTGACATATTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS GCA 72 bp | AAAGGCTCTCTTTCAACTCTAAGTGAAGTCTCTTCCTaGCTTTGTGATGTGGAACGAGAACAGCTTTTAAGT | + |
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Preference number: 6 (lower is better) Translates to: KGSLSTLSEVSS*LCDVEREQLLS Trigger: ACTTAAAAGCTGTTCTCGTTCCACATCACAAAGGCAGGAAGAGACTTCACTTAGAGTTGAAAGAGAGCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS CCA 72 bp | CTGTTTATATTCTACCTCCTTGCAATAAAACCAGTGTaGCTGAACAGGTTCGTACTGGTTCTGAAGTACAAA | + |
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Preference number: 6 (lower is better) Translates to: LFIFYLLAIKPV*LNRFVLVLKYK Trigger: TTTGTACTTCAGAACCAGTACGAACCTGTTCAGCCACACTGGTTTTATTGCAAGGAGGTAGAATATAAACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS CAA 72 bp | CACAGATCCCGGAGACTTAGAGACACACATATCCCTTaGATTAGACAATATGTCAAACAGTATCAAAGAACC | + |
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Preference number: 6 (lower is better) Translates to: HRSRRLRDTHIP*IRQYVKQYQRT Trigger: GGTTCTTTGATACTGTTTGACATATTGTCTAATCAAAGGGATATGTGTGTCTCTAAGTCTCCGGGATCTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS CAA 72 bp | CAACATCAAGGTCACATGATTCATCTGACATCAGCTTaGACTCTTCAGATATCAGCTTTTCCTGAAACTGTG | + |
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Preference number: 6 (lower is better) Translates to: QHQGHMIHLTSA*TLQISAFPETV Trigger: CACAGTTTCAGGAAAAGCTGATATCTGAAGAGTCAAAGCTGATGTCAGATGAATCATGTGACCTTGATGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS CAA 90 bp | CTTCATCCTCAACATCAAGGTCACATGATTCATCTGACATCAGCTTaGACTCTTCAGATATCAGCTTTTCCTGAAACTGTGAATGCTTTA | + |
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Preference number: 6 (lower is better) Translates to: LHPQHQGHMIHLTSA*TLQISAFPETVNAL Trigger: TAAAGCATTCACAGTTTCAGGAAAAGCTGATATCTGAAGAGTCAAAGCTGATGTCAGATGAATCATGTGACCTTGATGTTGAGGATGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS TCA 72 bp | ACAGATCCCGGAGACTTAGAGACACACATATCCCTTTaGTTAGACAATATGTCAAACAGTATCAAAGAACCT | + |
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Preference number: 6 (lower is better) Translates to: TDPGDLETHISL*LDNMSNSIKEP Trigger: AGGTTCTTTGATACTGTTTGACATATTGTCTAATCAAAGGGATATGTGTGTCTCTAAGTCTCCGGGATCTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS TCA 72 bp | TATAGATCTCTTCAAGATTCAAAGAGTCAAGCACACTaGAAGGCATCCATAGCTGTTTATATTCTACCTCCT | + |
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Preference number: 6 (lower is better) Translates to: YRSLQDSKSQAH*KASIAVYILPP Trigger: AGGAGGTAGAATATAAACAGCTATGGATGCCTTTCAGTGTGCTTGACTCTTTGAATCTTGAAGAGATCTATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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| CDS TCA 72 bp | AGCATAAGTGACTCTGAAGAGCGAAGAGATACTCATTaGAACTCTCGATTGGCTTTTCTTGAAGAACATAAT | + |
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Preference number: 6 (lower is better) Translates to: SISDSEERRDTH*NSRLAFLEEHN Trigger: ATTATGTTCTTCAAGAAAAGCCAATCGAGAGTTTCAATGAGTATCTCTTCGCTCTTCAGAGTCACTTATGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042942.10 |
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