Pregenerated sensors for SEC23B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027429Ensembl transcript IDs: ENSMUST00000028916.15, ENSMUST00000143573.8, ENSMUST00000149697.3, ENSMUST00000155876.8
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAACCTCCCCGAAAGGTGAATGTTGCTAGGACGCTATCAACAACGTaGGCACAATCTGACAGCATTGTCTTCCACTTCCAGGCGGGGCCA | + |
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Preference number: 1 (lower is better) Translates to: EPPRKVNVARTLSTT*AQSDSIVFHFQAGP Trigger: TGGCCCCGCCTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTGTTGATAGCGTCCTAGCAACATTCACCTTTCGGGGAGGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| 3UTR-3UTR TCA 90 bp | AACAGACAGAGAGGAATACAAATAAATTACAACCTGAAGACGTATTATAGCCTGACGCTATCAACAACGTaGGCACAATCTGACAGCATT | + |
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Preference number: 2 (lower is better) Translates to: NRQRGIQINYNLKTYYSLTLSTT*AQSDSI Trigger: AATGCTGTCAGATTGTGCTCACGTTGTTGATAGCGT...CAGGCTATAATACGTCTTCAGGTTGTAATTTATTTGTATTCCTCTCTGTCTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| 3UTR CAA 90 bp | CTGAAGACGTATTATAGCCTGAAGACATACATATATAAAAATTCCTaGGGTTATTTATTAGAACCTCCCCGAAAGGTGAATGTTGCTAGG | + |
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Preference number: 2 (lower is better) Translates to: LKTYYSLKTYIYKNS*GYLLEPPRKVNVAR Trigger: CCTAGCAACATTCACCTTTCGGGGAGGTTCTAATAAATAACCCAAGGAATTTTTATATATGTATGTCTTCAGGCTATAATACGTCTTCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| 3UTR TCA 72 bp | CGAAAGGTGAATGTTGCTAGGACGCTATCAACAACGTaGGCACAATCTGACAGCATTGTCTTCCACTTCCAG | + |
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Preference number: 3 (lower is better) Translates to: RKVNVARTLSTT*AQSDSIVFHFQ Trigger: CTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTGTTGATAGCGTCCTAGCAACATTCACCTTTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR TCA 90 bp | CAACGTGAGCACAATCTGACAGCATTGTCTTCCACTTCCAGGCGGGGCCACCAGGTCAGGCCCCTCCTCTaGCTCTGCGCGGAACACTCC | + |
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Preference number: 4 (lower is better) Translates to: QREHNLTALSSTSRRGHQVRPLL*LCAEHS Trigger: GGAGTGTTCCGCGCAGAGTCAGAGGAGGGGCCTGAC...CTGGTGGCCCCGCCTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR GCA 90 bp | CAACGTGAGCACAATCTGACAGCATTGTCTTCCACTTCCAGGCGGGGCCACCAGCCGTGCCATCAGGACTaGTGCGGCCTCCTGGTCAAA | + |
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Preference number: 4 (lower is better) Translates to: QREHNLTALSSTSRRGHQPCHQD*CGLLVK Trigger: TTTGACCAGGAGGCCGCAGCAGTCCTGATGGCACGG...CTGGTGGCCCCGCCTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR GCA 90 bp | CAACGTGAGCACAATCTGACAGCATTGTCTTCCACTTCCAGGCGGGGCCACCAGGCAGGTCTGGCTTGCTaGACAGGCATGGCTGACTTG | + |
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Preference number: 4 (lower is better) Translates to: QREHNLTALSSTSRRGHQAGLAC*TGMADL Trigger: CAAGTCAGCCATGCCTGTGCAGCAAGCCAGACCTGC...CTGGTGGCCCCGCCTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR GCA 90 bp | CAACGTGAGCACAATCTGACAGCATTGTCTTCCACTTCCAGGCGGGGCCACCAGGGCGCTCCAGTTTCCTaGCCCCAGGCATACAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: QREHNLTALSSTSRRGHQGAPVS*PQAYRL Trigger: TAACCTGTATGCCTGGGGGCAGGAAACTGGAGCGCC...CTGGTGGCCCCGCCTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR CCA 90 bp | CAACGTGAGCACAATCTGACAGCATTGTCTTCCACTTCCAGGCGGGGCCACCAGCTTGCTGCACAGGCATaGCTGACTTGGTCAGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: QREHNLTALSSTSRRGHQLAAQA*LTWSGP Trigger: TGGGCCTGACCAAGTCAGCCATGCCTGTGCAGCAAG...CTGGTGGCCCCGCCTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR CCA 90 bp | CAACGTGAGCACAATCTGACAGCATTGTCTTCCACTTCCAGGCGGGGCCACCAGGCCTCCCTGGGGAACTaGAGCATTGTGCTGATTGAC | + |
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Preference number: 4 (lower is better) Translates to: QREHNLTALSSTSRRGHQASLGN*SIVLID Trigger: GTCAATCAGCACAATGCTCCAGTTCCCCAGGGAGGC...CTGGTGGCCCCGCCTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR TCA 90 bp | CAACGTGAGCACAATCTGACAGCATTGTCTTCCACTTCCAGGCGGGGCCACCAGTCACAGCTTAGCTCATaGACCTGCACCATCCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: QREHNLTALSSTSRRGHQSQLSS*TCTILP Trigger: TGGGAGGATGGTGCAGGTTCATGAGCTAAGCTGTGA...CTGGTGGCCCCGCCTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR TCA 90 bp | CAACGTGAGCACAATCTGACAGCATTGTCTTCCACTTCCAGGCGGGGCCACCAGGATGCCAAGAGTAGATaGGGGATCCAGGCCACAGAT | + |
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Preference number: 4 (lower is better) Translates to: QREHNLTALSSTSRRGHQDAKSR*GIQATD Trigger: ATCTGTGGCCTGGATCCCTCATCTACTCTTGGCATC...CTGGTGGCCCCGCCTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR TCA 90 bp | CAACGTGAGCACAATCTGACAGCATTGTCTTCCACTTCCAGGCGGGGCCACCAGATCATAATGAGGGACTaGGTCAGATCCTGCCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: QREHNLTALSSTSRRGHQIIMRD*VRSCRA Trigger: TGCCCGGCAGGATCTGACTCAGTCCCTCATTATGAT...CTGGTGGCCCCGCCTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR GCA 90 bp | CAACGTGAGCACAATCTGACAGCATTGTCTTCCACTTCCAGGCGGGGCCACCAGTGGTGGTCACTCGGATaGGCTTCTGAGTGCTGGAAT | + |
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Preference number: 4 (lower is better) Translates to: QREHNLTALSSTSRRGHQWWSLG*ASECWN Trigger: ATTCCAGCACTCAGAAGCGCATCCGAGTGACCACCA...CTGGTGGCCCCGCCTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR GCA 90 bp | CAACGTGAGCACAATCTGACAGCATTGTCTTCCACTTCCAGGCGGGGCCACCAGGGCCTCCTGGTCAAATaGTGCTTCTATGTGCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: QREHNLTALSSTSRRGHQGLLVK*CFYVPQ Trigger: CTGAGGCACATAGAAGCAGCATTTGACCAGGAGGCC...CTGGTGGCCCCGCCTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR CCA 90 bp | CAACGTGAGCACAATCTGACAGCATTGTCTTCCACTTCCAGGCGGGGCCACCAGACCAACCAGGGCATCTaGAGGAAGGAGACTCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: QREHNLTALSSTSRRGHQTNQGI*RKETQR Trigger: TCTCTGAGTCTCCTTCCTCCAGATGCCCTGGTTGGT...CTGGTGGCCCCGCCTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR CCA 90 bp | CAACGTGAGCACAATCTGACAGCATTGTCTTCCACTTCCAGGCGGGGCCACCAGAATTGCGGGCAATGGTaGTCACTCGGATGCGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: QREHNLTALSSTSRRGHQNCGQW*SLGCAS Trigger: AGAAGCGCATCCGAGTGACCACCATTGCCCGCAATT...CTGGTGGCCCCGCCTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR CCA 90 bp | CAACGTGAGCACAATCTGACAGCATTGTCTTCCACTTCCAGGCGGGGCCACCAGACTGCTGCGGCCTCCTaGTCAAATGCTGCTTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: QREHNLTALSSTSRRGHQTAAAS*SNAASM Trigger: CATAGAAGCAGCATTTGACCAGGAGGCCGCAGCAGT...CTGGTGGCCCCGCCTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR GCA 90 bp | CAACGTGAGCACAATCTGACAGCATTGTCTTCCACTTCCAGGCGGGGCCACCAGCTCCTGGTCAAATGCTaGTTCTATGTGCCTCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: QREHNLTALSSTSRRGHQLLVKC*FYVPQL Trigger: CAGCTGAGGCACATAGAAGCAGCATTTGACCAGGAG...CTGGTGGCCCCGCCTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR GCA 90 bp | CAACGTGAGCACAATCTGACAGCATTGTCTTCCACTTCCAGGCGGGGCCACCAGTGGCATTGGGAAGCGTaGTTGCAGAATTTCTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: QREHNLTALSSTSRRGHQWHWEA*LQNFLG Trigger: GCCCAAGAAATTCTGCAAGCACGCTTCCCAATGCCA...CTGGTGGCCCCGCCTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR CCA 90 bp | CAACGTGAGCACAATCTGACAGCATTGTCTTCCACTTCCAGGCGGGGCCACCAGCCTGGCTCCAGTATTTaGGAAAGTCCCCTCCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: QREHNLTALSSTSRRGHQPGSSI*ESPLQQ Trigger: TTGTTGGAGGGGACTTTCCCAAATACTGGAGCCAGG...CTGGTGGCCCCGCCTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR GCA 90 bp | CAACGTGAGCACAATCTGACAGCATTGTCTTCCACTTCCAGGCGGGGCCACCAGAGACTCAGAGACATCTaGAGGGACTCTTTGAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: QREHNLTALSSTSRRGHQRLRDI*RDSLSA Trigger: AGCACTCAAAGAGTCCCTGCAGATGTCTCTGAGTCT...CTGGTGGCCCCGCCTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR TCA 90 bp | CAACGTGAGCACAATCTGACAGCATTGTCTTCCACTTCCAGGCGGGGCCACCAGGACTCTTTGAGTGCTTaGAGGTCATCTTCCTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: QREHNLTALSSTSRRGHQDSLSA*RSSSSK Trigger: TTTGGAGGAAGATGACCTTCAAGCACTCAAAGAGTC...CTGGTGGCCCCGCCTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR TCA 90 bp | CAACGTGAGCACAATCTGACAGCATTGTCTTCCACTTCCAGGCGGGGCCACCAGCAGAGAAAAGGAGTCTaGCAATCTGAAAGACGTAGG | + |
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Preference number: 4 (lower is better) Translates to: QREHNLTALSSTSRRGHQQRKGV*QSERRR Trigger: CCTACGTCTTTCAGATTGTCAGACTCCTTTTCTCTG...CTGGTGGCCCCGCCTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR GCA 90 bp | CAACGTGAGCACAATCTGACAGCATTGTCTTCCACTTCCAGGCGGGGCCACCAGTCTTTCTCAATGTCGTaGCAGGAACGAATAGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: QREHNLTALSSTSRRGHQSFSMS*QERIGV Trigger: GACTCCTATTCGTTCCTGGCACGACATTGAGAAAGA...CTGGTGGCCCCGCCTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR CCA 90 bp | CAACGTGAGCACAATCTGACAGCATTGTCTTCCACTTCCAGGCGGGGCCACCAGTCAATTGTGGAGAACTaGGGCATCAATTCAGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: QREHNLTALSSTSRRGHQSIVEN*GINSAG Trigger: ACCTGCTGAATTGATGCCCCAGTTCTCCACAATTGA...CTGGTGGCCCCGCCTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR TCA 90 bp | CAACGTGAGCACAATCTGACAGCATTGTCTTCCACTTCCAGGCGGGGCCACCAGATCAATTCAGCAGGTTaGTTCACCTCAGATATGCCT | + |
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Preference number: 4 (lower is better) Translates to: QREHNLTALSSTSRRGHQINSAG*FTSDMP Trigger: AGGCATATCTGAGGTGAATCAACCTGCTGAATTGAT...CTGGTGGCCCCGCCTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR TCA 90 bp | CAACGTGAGCACAATCTGACAGCATTGTCTTCCACTTCCAGGCGGGGCCACCAGGAGCATTGTGCTGATTaGCAACTTCAAAGTAGATGC | + |
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Preference number: 4 (lower is better) Translates to: QREHNLTALSSTSRRGHQEHCAD*QLQSRC Trigger: GCATCTACTTTGAAGTTGTCAATCAGCACAATGCTC...CTGGTGGCCCCGCCTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR TCA 90 bp | CAACGTGAGCACAATCTGACAGCATTGTCTTCCACTTCCAGGCGGGGCCACCAGAGATGGAACATGAACTaGGGATACAGAGAAAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: QREHNLTALSSTSRRGHQRWNMN*GYREKE Trigger: CTCCTTTTCTCTGTATCCTCAGTTCATGTTCCATCT...CTGGTGGCCCCGCCTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR CCA 90 bp | CAACGTGAGCACAATCTGACAGCATTGTCTTCCACTTCCAGGCGGGGCCACCAGTGTCAATCTTGTGAATaGGCTGTAGAAATCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: QREHNLTALSSTSRRGHQCQSCE*AVEICW Trigger: CCAGCAGATTTCTACAGCCCATTCACAAGATTGACA...CTGGTGGCCCCGCCTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR CCA 90 bp | AACAGACAGAGAGGAATACAAATAAATTACAACCTGAAGACGTATTATAGCCTGACCATGCCAGGTCCTTaGGTCGGGGGCCCGCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: NRQRGIQINYNLKTYYSLTMPGP*VGGPPV Trigger: CACTGGCGGGCCCCCGACCCAAGGACCTGGCATGGT...CAGGCTATAATACGTCTTCAGGTTGTAATTTATTTGTATTCCTCTCTGTCTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR GCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACGGCCATGGGTCCCTCTaGAGCTCCCCGAGAAGATCT | + |
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Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYGHGSL*SSPRRS Trigger: AGATCTTCTCGGGGAGCTGCAGAGGGACCCATGGCC...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR GCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACCATCTCCAACCACCATaGCAGGTCCTTGGGTCGGGG | + |
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Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYHLQPP*QVLGSG Trigger: CCCCGACCCAAGGACCTGGCATGGTGGTTGGAGATG...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR CCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACCCAGCCTTCCGCCACTaGGCTATGGTCTCACCAAGG | + |
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Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYPAFRH*AMVSPR Trigger: CCTTGGTGAGACCATAGCCCAGTGGCGGAAGGCTGG...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR TCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACAGTGGTCTCTTCCCCTaGGTTACTGGCCATGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYSGLFP*VTGHGS Trigger: GGACCCATGGCCAGTAACTCAGGGGAAGAGACCACT...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR GCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACCCTCAGCTGACTCTGTaGATCTGCCCAATTGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYPQLTL*ICPIAG Trigger: GCCCGCAATTGGGCAGATGCACAGAGTCAGCTGAGG...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR CCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACCAGGCATGGCTGACTTaGTCAGGCCCAGCATCTCCT | + |
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Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYQAWLT*SGPASP Trigger: AGGAGATGCTGGGCCTGACCAAGTCAGCCATGCCTG...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR CCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACGAGGTTGAGCAGGTCTaGCTTGCTGCACAGGCATGG | + |
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Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYEVEQV*LAAQAW Trigger: CCATGCCTGTGCAGCAAGCCAGACCTGCTCAACCTC...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR CCA 90 bp | AACAGACAGAGAGGAATACAAATAAATTACAACCTGAAGACGTATTATAGCCTGGCACCTCTGCCTCCCTaGGGAACTGGAGCATTGTGC | + |
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Preference number: 4 (lower is better) Translates to: NRQRGIQINYNLKTYYSLAPLPP*GTGALC Trigger: GCACAATGCTCCAGTTCCCCAGGGAGGCAGAGGTGC...CAGGCTATAATACGTCTTCAGGTTGTAATTTATTTGTATTCCTCTCTGTCTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR CCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACCCCAATTGCGGGCAATaGTGGTCACTCGGATGCGCT | + |
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Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYPNCGQ*WSLGCA Trigger: AGCGCATCCGAGTGACCACCATTGCCCGCAATTGGG...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR CCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACTACTCGGGCATGTCCTaGTATCCAGCCTTCCGCCAC | + |
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Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYYSGMS*YPAFRH Trigger: GTGGCGGAAGGCTGGATACCAGGACATGCCCGAGTA...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR CCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACGCTTGCAGAATTTCTTaGGCATCATCCAGGGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYACRIS*ASSRGA Trigger: GGCGCCCCTGGATGATGCCCAAGAAATTCTGCAAGC...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR CCA 90 bp | AACAGACAGAGAGGAATACAAATAAATTACAACCTGAAGACGTATTATAGCCTGCATCGTCTGTCAGGATaGGCGCTCCAGTTTCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: NRQRGIQINYNLKTYYSLHRLSG*ALQFPA Trigger: GGCAGGAAACTGGAGCGCCCATCCTGACAGACGATG...CAGGCTATAATACGTCTTCAGGTTGTAATTTATTTGTATTCCTCTCTGTCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR TCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACGCCACACGTTCCAACTaGAACGCACACCATCTCGTT | + |
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Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYATRSN*NAHHLV Trigger: AACGAGATGGTGTGCGTTTCAGTTGGAACGTGTGGC...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR TCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACCCACAGATCTTCCACTaGCTTGTGCCACCAACACCA | + |
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Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYPQIFH*LVPPTP Trigger: TGGTGTTGGTGGCACAAGTCAGTGGAAGATCTGTGG...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR TCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACTCATCCAGGGGCGCCTaGAGAAGGTGCTTGAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYSSRGA*RRCLKF Trigger: AAACTTCAAGCACCTTCTTCAGGCGCCCCTGGATGA...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR GCA 90 bp | AACAGACAGAGAGGAATACAAATAAATTACAACCTGAAGACGTATTATAGCCTGGTGCATCTGCCCAATTaGGGGCAATGGTGGTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: NRQRGIQINYNLKTYYSLVHLPN*GQWWSL Trigger: GAGTGACCACCATTGCCCGCAATTGGGCAGATGCAC...CAGGCTATAATACGTCTTCAGGTTGTAATTTATTTGTATTCCTCTCTGTCTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR CCA 90 bp | AACAGACAGAGAGGAATACAAATAAATTACAACCTGAAGACGTATTATAGCCTGACCAGTGGACCGCAGTaGTCTCTTCCCCTGAGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: NRQRGIQINYNLKTYYSLTSGPQ*SLPLSY Trigger: GTAACTCAGGGGAAGAGACCACTGCGGTCCACTGGT...CAGGCTATAATACGTCTTCAGGTTGTAATTTATTTGTATTCCTCTCTGTCTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR CCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACTACTGTGTGACAAACTaGATGGCACCTCTGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYYCVTN*MAPLPP Trigger: GGGAGGCAGAGGTGCCATCCAGTTTGTCACACAGTA...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR CCA 90 bp | AACAGACAGAGAGGAATACAAATAAATTACAACCTGAAGACGTATTATAGCCTGCAGGAGTACAGGCTCTaGTGGTCCGTGGAAGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: NRQRGIQINYNLKTYYSLQEYRL*WSVEGV Trigger: TACTCCTTCCACGGACCACCAGAGCCTGTACTCCTG...CAGGCTATAATACGTCTTCAGGTTGTAATTTATTTGTATTCCTCTCTGTCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR TCA 90 bp | AACAGACAGAGAGGAATACAAATAAATTACAACCTGAAGACGTATTATAGCCTGTCTATGTGCCTCAGCTaGCTCTGTGCATCTGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NRQRGIQINYNLKTYYSLSMCLS*LCASAQ Trigger: TTGGGCAGATGCACAGAGTCAGCTGAGGCACATAGA...CAGGCTATAATACGTCTTCAGGTTGTAATTTATTTGTATTCCTCTCTGTCTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR TCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACCGCCATGCTCTGTGTTaGTATAACGTGGCATTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYRHALC*YNVALG Trigger: TCCCAATGCCACGTTATATCAACACAGAGCATGGCG...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR GCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACTGGACCAATGGCTCCTaGAATCTTCAGTTCCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYWTNGS*NLQFPR Trigger: TCTCGGGAACTGAAGATTGCAGGAGCCATTGGTCCA...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR GCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACGGATGCGCTTCTGAGTaGTGGAATGCTGATACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYGCASE*WNADTV Trigger: CACAGTATCAGCATTCCAGCACTCAGAAGCGCATCC...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR GCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACCAGCTAGAATGCTACTaGTGTCCAGGAGTACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYQLECY*CPGVQA Trigger: AGCCTGTACTCCTGGACAGCAGTAGCATTCTAGCTG...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR TCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACTCTGCAGGGACTCTTTaGGTGCTTGAAGGTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYSAGTL*VLEGHL Trigger: AAGATGACCTTCAAGCACTCAAAGAGTCCCTGCAGA...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR TCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACCCTGAAGAAGGTGCTTaGAGTTTTCATACTCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYPEEGA*SFHTRA Trigger: TGCCCGAGTATGAAAACTTCAAGCACCTTCTTCAGG...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR GCA 90 bp | AACAGACAGAGAGGAATACAAATAAATTACAACCTGAAGACGTATTATAGCCTGGCAGGCCCAGAGTTTTaGTCGGTAATCCACTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: NRQRGIQINYNLKTYYSLAGPEF*SVIHLT Trigger: TGTCAAGTGGATTACCGAGCAAAACTCTGGGCCTGC...CAGGCTATAATACGTCTTCAGGTTGTAATTTATTTGTATTCCTCTCTGTCTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR GCA 90 bp | AACAGACAGAGAGGAATACAAATAAATTACAACCTGAAGACGTATTATAGCCTGCACCTCAGATATGCCTaGATATGCTGGAGGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: NRQRGIQINYNLKTYYSLHLRYA*ICWREL Trigger: CAGTTCCCTCCAGCATATGCAGGCATATCTGAGGTG...CAGGCTATAATACGTCTTCAGGTTGTAATTTATTTGTATTCCTCTCTGTCTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR CCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACACAAGCCAACAGCAATaGACAAAGCAACACCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYTSQQQ*TKQHQW Trigger: CCACTGGTGTTGCTTTGTCCATTGCTGTTGGCTTGT...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR CCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACTCTCCCATCACCATGTaGCCTCCTGTAAGATTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYSPITM*PPVRFG Trigger: TCCAAATCTTACAGGAGGCCACATGGTGATGGGAGA...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR CCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACATTCAGAGACACGCATaGACCAATGGCTCCTGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYIQRHA*TNGSCN Trigger: ATTGCAGGAGCCATTGGTCCATGCGTGTCTCTGAAT...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR GCA 90 bp | AACAGACAGAGAGGAATACAAATAAATTACAACCTGAAGACGTATTATAGCCTGGATTCACCTCAGATATaGCTGCATATGCTGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NRQRGIQINYNLKTYYSLDSPQI*LHMLEG Trigger: TCCCTCCAGCATATGCAGGCATATCTGAGGTGAATC...CAGGCTATAATACGTCTTCAGGTTGTAATTTATTTGTATTCCTCTCTGTCTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR GCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACTTCTGTCAGCTAGAATaGTACTGCTGTCCAGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYFCQLE*YCCPGV Trigger: TACTCCTGGACAGCAGTAGCATTCTAGCTGACAGAA...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR CCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACGCTGTAGAAATCTGCTaGAAACAAAAGGCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYAVEIC*KQKAAP Trigger: AGGAGCAGCCTTTTGTTTCCAGCAGATTTCTACAGC...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR CCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACGATATAACGTGGCATTaGGAAGCGTGCTTGCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYDITWH*EACLQN Trigger: ATTCTGCAAGCACGCTTCCCAATGCCACGTTATATC...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR CCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACTGTGTTGATATAACGTaGCATTGGGAAGCGTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYCVDIT*HWEACL Trigger: CAAGCACGCTTCCCAATGCCACGTTATATCAACACA...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR TCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACCTTCATTCTGCTGAATaGATTCCAGATACGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYLHSAE*IPDTLP Trigger: TGGCAACGTATCTGGAATTCATTCAGCAGAATGAAG...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR GCA 90 bp | AACAGACAGAGAGGAATACAAATAAATTACAACCTGAAGACGTATTATAGCCTGTGGGCTGTAGAAATCTaGTGGAAACAAAAGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NRQRGIQINYNLKTYYSLWAVEI*WKQKAA Trigger: AGCAGCCTTTTGTTTCCAGCAGATTTCTACAGCCCA...CAGGCTATAATACGTCTTCAGGTTGTAATTTATTTGTATTCCTCTCTGTCTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR GCA 90 bp | AACAGACAGAGAGGAATACAAATAAATTACAACCTGAAGACGTATTATAGCCTGATTGGGAAGCGTGCTTaGAGAATTTCTTGGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: NRQRGIQINYNLKTYYSLIGKRA*RISWAS Trigger: TGATGCCCAAGAAATTCTGCAAGCACGCTTCCCAAT...CAGGCTATAATACGTCTTCAGGTTGTAATTTATTTGTATTCCTCTCTGTCTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR CCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACTATGCCTGCATATGCTaGAGGGAACTGATTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYYACIC*RELISL Trigger: CAAAGAAATCAGTTCCCTCCAGCATATGCAGGCATA...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR TCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACTTCTCAGATGGAACATaGACTGAGGATACAGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYFSDGT*TEDTEK Trigger: TTTCTCTGTATCCTCAGTTCATGTTCCATCTGAGAA...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR TCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACAGGTTATTGTGTGTCTaGGATGGGTTAACTTTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYRLLCV*DGLTLD Trigger: GTCTAAAGTTAACCCATCTCAGACACACAATAACCT...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR GCA 90 bp | AACAGACAGAGAGGAATACAAATAAATTACAACCTGAAGACGTATTATAGCCTGAGATATGCCTGCATATaGTGGAGGGAACTGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NRQRGIQINYNLKTYYSLRYACI*WRELIS Trigger: AGAAATCAGTTCCCTCCAGCATATGCAGGCATATCT...CAGGCTATAATACGTCTTCAGGTTGTAATTTATTTGTATTCCTCTCTGTCTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR GCA 90 bp | AACAGACAGAGAGGAATACAAATAAATTACAACCTGAAGACGTATTATAGCCTGCTCATAATGCTTGGTTaGCTTCTTCATGAATCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NRQRGIQINYNLKTYYSLLIMLG*LLHESC Trigger: GCACGATTCATGAAGAAGGCAACCAAGCATTATGAG...CAGGCTATAATACGTCTTCAGGTTGTAATTTATTTGTATTCCTCTCTGTCTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR CCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACTCATGTACTCAATTGTaGAGAACTGGGGCATCAATT | + |
|
Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYSCTQL*RTGASI Trigger: AATTGATGCCCCAGTTCTCCACAATTGAGTACATGA...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR CCA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACATCCACTTGACAAAGTaGATTGAGAATAGCTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RTLMTYNFMWRKTDREEYIHLTK*IENSFA Trigger: TGCAAAGCTATTCTCAATCCACTTTGTCAAGTGGAT...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR GCA 90 bp | AACAGACAGAGAGGAATACAAATAAATTACAACCTGAAGACGTATTATAGCCTGCTTCTTCATGAATCGTaGGTTATCTTTCTCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: NRQRGIQINYNLKTYYSLLLHES*VIFLNV Trigger: GACATTGAGAAAGATAACGCACGATTCATGAAGAAG...CAGGCTATAATACGTCTTCAGGTTGTAATTTATTTGTATTCCTCTCTGTCTGTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS TCA 90 bp | GATGAGTTGCCGATCCAGCCACCGAAGCACGTCAGGCCCCTCCTCTaGCTCTGCGCGGAACACTCCAAGCCGTGCCATCAGGACTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: DELPIQPPKHVRPLL*LCAEHSKPCHQDCC Trigger: GCAGCAGTCCTGATGGCACGGCTTGGAGTGTTCCGCGCAGAGTCAGAGGAGGGGCCTGACGTGCTTCGGTGGCTGGATCGGCAACTCATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR CAA 90 bp | CAACGTGAGCACAATCTGACAGCATTGTCTTCCACTTCCAGGCGGGGCCACCAGAGGCTGCTCCTGAGGTaGAGCAGGTCTGGCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QREHNLTALSSTSRRGHQRLLLR*SRSGLL Trigger: CAGCAAGCCAGACCTGCTCAACCTCAGGAGCAGCCT...CTGGTGGCCCCGCCTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS TCA 90 bp | ACTGCTGCGGCCTCCTGGTCAAATGCTGCTTCTATGTGCCTCAGCTaGCTCTGTGCATCTGCCCAATTGCGGGCAATGGTGGTCACTCGG | + |
|
Preference number: 5 (lower is better) Translates to: TAAASWSNAASMCLS*LCASAQLRAMVVTR Trigger: CCGAGTGACCACCATTGCCCGCAATTGGGCAGATGCACAGAGTCAGCTGAGGCACATAGAAGCAGCATTTGACCAGGAGGCCGCAGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS GCA 90 bp | TCCAAGCCGTGCCATCAGGACTGCTGCGGCCTCCTGGTCAAATGCTaGTTCTATGTGCCTCAGCTGACTCTGTGCATCTGCCCAATTGCG | + |
|
Preference number: 5 (lower is better) Translates to: SKPCHQDCCGLLVKC*FYVPQLTLCICPIA Trigger: CGCAATTGGGCAGATGCACAGAGTCAGCTGAGGCACATAGAAGCAGCATTTGACCAGGAGGCCGCAGCAGTCCTGATGGCACGGCTTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS CCA 90 bp | AAGTCCCCTCCAACAAGCCAACAGCAATGGACAAAGCAACACCAGTaGACCGCAGTGGTCTCTTCCCCTGAGTTACTGGCCATGGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KSPPTSQQQWTKQHQ*TAVVSSPELLAMGP Trigger: GGGACCCATGGCCAGTAACTCAGGGGAAGAGACCACTGCGGTCCACTGGTGTTGCTTTGTCCATTGCTGTTGGCTTGTTGGAGGGGACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS CCA 90 bp | CCGAGCCTGACTGCCGCCATGCTCTGTGTTGATATAACGTGGCATTaGGAAGCGTGCTTGCAGAATTTCTTGGGCATCATCCAGGGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PSLTAAMLCVDITWH*EACLQNFLGIIQGR Trigger: GCGCCCCTGGATGATGCCCAAGAAATTCTGCAAGCACGCTTCCCAATGCCACGTTATATCAACACAGAGCATGGCGGCAGTCAGGCTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR CAA 90 bp | CAACGTGAGCACAATCTGACAGCATTGTCTTCCACTTCCAGGCGGGGCCACCAGTGCAGGCCCAGAGTTTaGCTCGGTAATCCACTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: QREHNLTALSSTSRRGHQCRPRV*LGNPLD Trigger: GTCAAGTGGATTACCGAGCAAAACTCTGGGCCTGCA...CTGGTGGCCCCGCCTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS CCA 90 bp | TGGCTCCAGTATTTGGGAAAGTCCCCTCCAACAAGCCAACAGCAATaGACAAAGCAACACCAGTGGACCGCAGTGGTCTCTTCCCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: WLQYLGKSPPTSQQQ*TKQHQWTAVVSSPE Trigger: CTCAGGGGAAGAGACCACTGCGGTCCACTGGTGTTGCTTTGTCCATTGCTGTTGGCTTGTTGGAGGGGACTTTCCCAAATACTGGAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR CAA 90 bp | CAACGTGAGCACAATCTGACAGCATTGTCTTCCACTTCCAGGCGGGGCCACCAGCTCCAGAAGTCCAGTTaGGTCAAGGGCACAAGCATA | + |
|
Preference number: 5 (lower is better) Translates to: QREHNLTALSSTSRRGHQLQKSS*VKGTSI Trigger: TATGCTTGTGCCCTTGACCAAACTGGACTTCTGGAG...CTGGTGGCCCCGCCTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS GCA 90 bp | ACTGCCGCCATGCTCTGTGTTGATATAACGTGGCATTGGGAAGCGTaGTTGCAGAATTTCTTGGGCATCATCCAGGGGCGCCTGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TAAMLCVDITWHWEA*LQNFLGIIQGRLKK Trigger: CTTCTTCAGGCGCCCCTGGATGATGCCCAAGAAATTCTGCAAGCACGCTTCCCAATGCCACGTTATATCAACACAGAGCATGGCGGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS CCA 90 bp | CCTGAGGTTGAGCAGGTCTGGCTTGCTGCACAGGCATGGCTGACTTaGTCAGGCCCAGCATCTCCTGTATTTGCTTTGCAGTTAAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: PEVEQVWLAAQAWLT*SGPASPVFALQLNP Trigger: AGGATTTAACTGCAAAGCAAATACAGGAGATGCTGGGCCTGACCAAGTCAGCCATGCCTGTGCAGCAAGCCAGACCTGCTCAACCTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028916.15 ENSMUST00000143573.8 |
||
| CDS CCA 90 bp | CAGGAACCGAGCCTGACTGCCGCCATGCTCTGTGTTGATATAACGTaGCATTGGGAAGCGTGCTTGCAGAATTTCTTGGGCATCATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QEPSLTAAMLCVDIT*HWEACLQNFLGIIQ Trigger: CTGGATGATGCCCAAGAAATTCTGCAAGCACGCTTCCCAATGCCACGTTATATCAACACAGAGCATGGCGGCAGTCAGGCTCGGTTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
||
| CDS-3UTR CAA 90 bp | CAACGTGAGCACAATCTGACAGCATTGTCTTCCACTTCCAGGCGGGGCCACCAGGGACTCTTTGAGTGCTaGAAGGTCATCTTCCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: QREHNLTALSSTSRRGHQGLFEC*KVIFLQ Trigger: TTGGAGGAAGATGACCTTCAAGCACTCAAAGAGTCC...CTGGTGGCCCCGCCTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS GCA 90 bp | GCATGGCCCTTTCACATTCAGAGACACGCATGGACCAATGGCTCCTaGAATCTTCAGTTCCCGAGAGGTCTTTACATCCAACGTAGCACC | + |
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Preference number: 5 (lower is better) Translates to: AWPFHIQRHAWTNGS*NLQFPRGLYIQRST Trigger: GGTGCTACGTTGGATGTAAAGACCTCTCGGGAACTGAAGATTGCAGGAGCCATTGGTCCATGCGTGTCTCTGAATGTGAAAGGGCCATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS TCA 90 bp | GGGCATCTGGAGGAAGGAGACTCAGAGACATCTGCAGGGACTCTTTaGGTGCTTGAAGGTCATCTTCCTCCAAACACGTGTCAACCACAT | + |
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Preference number: 5 (lower is better) Translates to: GHLEEGDSETSAGTL*VLEGHLPPNTCQPH Trigger: ATGTGGTTGACACGTGTTTGGAGGAAGATGACCTTCAAGCACTCAAAGAGTCCCTGCAGATGTCTCTGAGTCTCCTTCCTCCAGATGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028916.15 ENSMUST00000143573.8 |
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| CDS-3UTR CAA 90 bp | CAACGTGAGCACAATCTGACAGCATTGTCTTCCACTTCCAGGCGGGGCCACCAGTCTCCTGTATTTGCTTaGCAGTTAAATCCTTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: QREHNLTALSSTSRRGHQSPVFA*QLNPWS Trigger: GGACCAAGGATTTAACTGCAAAGCAAATACAGGAGA...CTGGTGGCCCCGCCTGGAAGTGGAAGACAATGCTGTCAGATTGTGCTCACGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR CAA 90 bp | AACAGACAGAGAGGAATACAAATAAATTACAACCTGAAGACGTATTATAGCCTGCACCATGCCAGGTCCTaGGGTCGGGGGCCCGCCAGT | + |
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Preference number: 5 (lower is better) Translates to: NRQRGIQINYNLKTYYSLHHARS*GRGPAS Trigger: ACTGGCGGGCCCCCGACCCAAGGACCTGGCATGGTG...CAGGCTATAATACGTCTTCAGGTTGTAATTTATTTGTATTCCTCTCTGTCTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS GCA 90 bp | CAATTTGGAAGAAAGTATCCATCAGCAGAATTCTGTCAGCTAGAATaGTACTGCTGTCCAGGAGTACAGGCTCTGGTGGTCCGTGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: QFGRKYPSAEFCQLE*YCCPGVQALVVRGR Trigger: CCTTCCACGGACCACCAGAGCCTGTACTCCTGGACAGCAGTAGCATTCTAGCTGACAGAATTCTGCTGATGGATACTTTCTTCCAAATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS CCA 90 bp | AGATCAGAGGAGACCGAGCACCTCTCTGGATCATGTACTCAATTGTaGAGAACTGGGGCATCAATTCAGCAGGTTGATTCACCTCAGATA | + |
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Preference number: 5 (lower is better) Translates to: RSEETEHLSGSCTQL*RTGASIQQVDSPQI Trigger: TATCTGAGGTGAATCAACCTGCTGAATTGATGCCCCAGTTCTCCACAATTGAGTACATGATCCAGAGAGGTGCTCGGTCTCCTCTGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028916.15 ENSMUST00000143573.8 ENSMUST00000155876.8 |
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| CDS GCA 90 bp | TGGAGAACTGGGGCATCAATTCAGCAGGTTGATTCACCTCAGATATaGCTGCATATGCTGGAGGGAACTGATTTCTTTGAAAACAGAAAT | + |
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Preference number: 5 (lower is better) Translates to: WRTGASIQQVDSPQI*LHMLEGTDFFENRN Trigger: ATTTCTGTTTTCAAAGAAATCAGTTCCCTCCAGCATATGCAGGCATATCTGAGGTGAATCAACCTGCTGAATTGATGCCCCAGTTCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028916.15 ENSMUST00000143573.8 ENSMUST00000149697.3 ENSMUST00000155876.8 |
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| CDS-3UTR CAA 90 bp | AACAGACAGAGAGGAATACAAATAAATTACAACCTGAAGACGTATTATAGCCTGACACAGTCTGATGAGTaGCCGATCCAGCCACCGAAG | + |
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Preference number: 5 (lower is better) Translates to: NRQRGIQINYNLKTYYSLTQSDE*PIQPPK Trigger: CTTCGGTGGCTGGATCGGCAACTCATCAGACTGTGT...CAGGCTATAATACGTCTTCAGGTTGTAATTTATTTGTATTCCTCTCTGTCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS GCA 90 bp | ATTAGCAAGCATCTCATAATGCTTGGTTGCCTTCTTCATGAATCGTaGGTTATCTTTCTCAATGTCGTGCCAGGAACGAATAGGAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: ISKHLIMLGCLLHES*VIFLNVVPGTNRSL Trigger: AAGACTCCTATTCGTTCCTGGCACGACATTGAGAAAGATAACGCACGATTCATGAAGAAGGCAACCAAGCATTATGAGATGCTTGCTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS TCA 90 bp | TCTTCTCAGATGGAACATGAACTGAGGATACAGAGAAAAGGAGTCTaGCAATCTGAAAGACGTAGGGTCTTCTTTGTTATACTGCCCAAA | + |
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Preference number: 5 (lower is better) Translates to: SSQMEHELRIQRKGV*QSERRRVFFVILPK Trigger: TTTGGGCAGTATAACAAAGAAGACCCTACGTCTTTCAGATTGTCAGACTCCTTTTCTCTGTATCCTCAGTTCATGTTCCATCTGAGAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR CAA 90 bp | AACAGACAGAGAGGAATACAAATAAATTACAACCTGAAGACGTATTATAGCCTGCATTGGGAAGCGTGCTaGCAGAATTTCTTGGGCATC | + |
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Preference number: 5 (lower is better) Translates to: NRQRGIQINYNLKTYYSLHWEAC*QNFLGI Trigger: GATGCCCAAGAAATTCTGCAAGCACGCTTCCCAATG...CAGGCTATAATACGTCTTCAGGTTGTAATTTATTTGTATTCCTCTCTGTCTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR CAA 90 bp | AACAGACAGAGAGGAATACAAATAAATTACAACCTGAAGACGTATTATAGCCTGGGATCATGTACTCAATaGTGGAGAACTGGGGCATCA | + |
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Preference number: 5 (lower is better) Translates to: NRQRGIQINYNLKTYYSLGSCTQ*WRTGAS Trigger: TGATGCCCCAGTTCTCCACAATTGAGTACATGATCC...CAGGCTATAATACGTCTTCAGGTTGTAATTTATTTGTATTCCTCTCTGTCTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR CAA 90 bp | AGGACACTTATGACATATAATTTCATGTGGAGGAAAACAGACAGAGAGGAATACTGCTCGGTAATCCACTaGACAAAGTGGATTGAGAAT | + |
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Preference number: 5 (lower is better) Translates to: RTLMTYNFMWRKTDREEYCSVIH*TKWIEN Trigger: ATTCTCAATCCACTTTGTCAAGTGGATTACCGAGCA...GTATTCCTCTCTGTCTGTTTTCCTCCACATGAAATTATATGTCATAAGTGTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS-3UTR CAA 90 bp | AACAGACAGAGAGGAATACAAATAAATTACAACCTGAAGACGTATTATAGCCTGCATCAATTCAGCAGGTaGATTCACCTCAGATATGCC | + |
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Preference number: 5 (lower is better) Translates to: NRQRGIQINYNLKTYYSLHQFSR*IHLRYA Trigger: GGCATATCTGAGGTGAATCAACCTGCTGAATTGATG...CAGGCTATAATACGTCTTCAGGTTGTAATTTATTTGTATTCCTCTCTGTCTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS TCA 72 bp | CCGATCCAGCCACCGAAGCACGTCAGGCCCCTCCTCTaGCTCTGCGCGGAACACTCCAAGCCGTGCCATCAG | + |
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Preference number: 6 (lower is better) Translates to: PIQPPKHVRPLL*LCAEHSKPCHQ Trigger: CTGATGGCACGGCTTGGAGTGTTCCGCGCAGAGTCAGAGGAGGGGCCTGACGTGCTTCGGTGGCTGGATCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS CCA 72 bp | ACCAGTGGACCGCAGTGGTCTCTTCCCCTGAGTTACTaGCCATGGGTCCCTCTGCAGCTCCCCGAGAAGATC | + |
|
Preference number: 6 (lower is better) Translates to: TSGPQWSLPLSY*PWVPLQLPEKI Trigger: GATCTTCTCGGGGAGCTGCAGAGGGACCCATGGCCAGTAACTCAGGGGAAGAGACCACTGCGGTCCACTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028916.15 ENSMUST00000143573.8 |
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| CDS CCA 72 bp | GAGCAGGTCTGGCTTGCTGCACAGGCATGGCTGACTTaGTCAGGCCCAGCATCTCCTGTATTTGCTTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: EQVWLAAQAWLT*SGPASPVFALQ Trigger: CTGCAAAGCAAATACAGGAGATGCTGGGCCTGACCAAGTCAGCCATGCCTGTGCAGCAAGCCAGACCTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028916.15 ENSMUST00000143573.8 |
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| CDS CCA 72 bp | GCTGACTCTGTGCATCTGCCCAATTGCGGGCAATGGTaGTCACTCGGATGCGCTTCTGAGTGCTGGAATGCT | + |
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Preference number: 6 (lower is better) Translates to: ADSVHLPNCGQW*SLGCASECWNA Trigger: AGCATTCCAGCACTCAGAAGCGCATCCGAGTGACCACCATTGCCCGCAATTGGGCAGATGCACAGAGTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS CCA 72 bp | AACAGCAATGGACAAAGCAACACCAGTGGACCGCAGTaGTCTCTTCCCCTGAGTTACTGGCCATGGGTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: NSNGQSNTSGPQ*SLPLSYWPWVP Trigger: AGGGACCCATGGCCAGTAACTCAGGGGAAGAGACCACTGCGGTCCACTGGTGTTGCTTTGTCCATTGCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028916.15 ENSMUST00000143573.8 |
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| CDS CCA 72 bp | CCAACAAGCCAACAGCAATGGACAAAGCAACACCAGTaGACCGCAGTGGTCTCTTCCCCTGAGTTACTGGCC | + |
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Preference number: 6 (lower is better) Translates to: PTSQQQWTKQHQ*TAVVSSPELLA Trigger: GGCCAGTAACTCAGGGGAAGAGACCACTGCGGTCCACTGGTGTTGCTTTGTCCATTGCTGTTGGCTTGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028916.15 ENSMUST00000143573.8 |
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| CDS CAA 72 bp | GTTATACTGCCCAAACTTCTGACACAGTCTGATGAGTaGCCGATCCAGCCACCGAAGCACGTCAGGCCCCTC | + |
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Preference number: 6 (lower is better) Translates to: VILPKLLTQSDE*PIQPPKHVRPL Trigger: GAGGGGCCTGACGTGCTTCGGTGGCTGGATCGGCAACTCATCAGACTGTGTCAGAAGTTTGGGCAGTATAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS CAA 90 bp | GCCGCCATGCTCTGTGTTGATATAACGTGGCATTGGGAAGCGTGCTaGCAGAATTTCTTGGGCATCATCCAGGGGCGCCTGAAGAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: AAMLCVDITWHWEAC*QNFLGIIQGRLKKV Trigger: CACCTTCTTCAGGCGCCCCTGGATGATGCCCAAGAAATTCTGCAAGCACGCTTCCCAATGCCACGTTATATCAACACAGAGCATGGCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS TCA 72 bp | ACAGGAACCGAGCCTGACTGCCGCCATGCTCTGTGTTaGTATAACGTGGCATTGGGAAGCGTGCTTGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: TGTEPDCRHALC*YNVALGSVLAE Trigger: TTCTGCAAGCACGCTTCCCAATGCCACGTTATATCAACACAGAGCATGGCGGCAGTCAGGCTCGGTTCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS CCA 72 bp | CCCGCCAGTGAACAGCATGATCCTGGCTCCAGTATTTaGGAAAGTCCCCTCCAACAAGCCAACAGCAATGGA | + |
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Preference number: 6 (lower is better) Translates to: PASEQHDPGSSI*ESPLQQANSNG Trigger: TCCATTGCTGTTGGCTTGTTGGAGGGGACTTTCCCAAATACTGGAGCCAGGATCATGCTGTTCACTGGCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS CCA 72 bp | AGCCTGACTGCCGCCATGCTCTGTGTTGATATAACGTaGCATTGGGAAGCGTGCTTGCAGAATTTCTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: SLTAAMLCVDIT*HWEACLQNFLG Trigger: GCCCAAGAAATTCTGCAAGCACGCTTCCCAATGCCACGTTATATCAACACAGAGCATGGCGGCAGTCAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS CAA 72 bp | CTCTGTGTTGATATAACGTGGCATTGGGAAGCGTGCTaGCAGAATTTCTTGGGCATCATCCAGGGGCGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LCVDITWHWEAC*QNFLGIIQGRL Trigger: CAGGCGCCCCTGGATGATGCCCAAGAAATTCTGCAAGCACGCTTCCCAATGCCACGTTATATCAACACAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS GCA 72 bp | ATGCTCTGTGTTGATATAACGTGGCATTGGGAAGCGTaGTTGCAGAATTTCTTGGGCATCATCCAGGGGCGC | + |
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Preference number: 6 (lower is better) Translates to: MLCVDITWHWEA*LQNFLGIIQGR Trigger: GCGCCCCTGGATGATGCCCAAGAAATTCTGCAAGCACGCTTCCCAATGCCACGTTATATCAACACAGAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS CCA 72 bp | TATTTGGGAAAGTCCCCTCCAACAAGCCAACAGCAATaGACAAAGCAACACCAGTGGACCGCAGTGGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: YLGKSPPTSQQQ*TKQHQWTAVVS Trigger: AGAGACCACTGCGGTCCACTGGTGTTGCTTTGTCCATTGCTGTTGGCTTGTTGGAGGGGACTTTCCCAAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS CAA 72 bp | GAGGAGACCGAGCACCTCTCTGGATCATGTACTCAATaGTGGAGAACTGGGGCATCAATTCAGCAGGTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: EETEHLSGSCTQ*WRTGASIQQVD Trigger: ATCAACCTGCTGAATTGATGCCCCAGTTCTCCACAATTGAGTACATGATCCAGAGAGGTGCTCGGTCTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028916.15 ENSMUST00000143573.8 ENSMUST00000155876.8 |
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| CDS CAA 72 bp | GAGACTCAGAGACATCTGCAGGGACTCTTTGAGTGCTaGAAGGTCATCTTCCTCCAAACACGTGTCAACCAC | + |
|
Preference number: 6 (lower is better) Translates to: ETQRHLQGLFEC*KVIFLQTRVNH Trigger: GTGGTTGACACGTGTTTGGAGGAAGATGACCTTCAAGCACTCAAAGAGTCCCTGCAGATGTCTCTGAGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028916.15 ENSMUST00000143573.8 |
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| CDS CAA 90 bp | TGTGTTGATATAACGTGGCATTGGGAAGCGTGCTTGCAGAATTTCTaGGGCATCATCCAGGGGCGCCTGAAGAAGGTGCTTGAAGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: CVDITWHWEACLQNF*GIIQGRLKKVLEVF Trigger: GAAAACTTCAAGCACCTTCTTCAGGCGCCCCTGGATGATGCCCAAGAAATTCTGCAAGCACGCTTCCCAATGCCACGTTATATCAACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS TCA 72 bp | TCAATTGTGGAGAACTGGGGCATCAATTCAGCAGGTTaGTTCACCTCAGATATGCCTGCATATGCTGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SIVENWGINSAG*FTSDMPAYAGG Trigger: CCCTCCAGCATATGCAGGCATATCTGAGGTGAATCAACCTGCTGAATTGATGCCCCAGTTCTCCACAATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028916.15 ENSMUST00000143573.8 ENSMUST00000149697.3 ENSMUST00000155876.8 |
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| CDS TCA 72 bp | AGACTCAGAGACATCTGCAGGGACTCTTTGAGTGCTTaGAGGTCATCTTCCTCCAAACACGTGTCAACCACA | + |
|
Preference number: 6 (lower is better) Translates to: RLRDICRDSLSA*RSSSSKHVSTT Trigger: TGTGGTTGACACGTGTTTGGAGGAAGATGACCTTCAAGCACTCAAAGAGTCCCTGCAGATGTCTCTGAGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028916.15 ENSMUST00000143573.8 |
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| CDS GCA 72 bp | AAGGAGACTCAGAGACATCTGCAGGGACTCTTTGAGTaGTTGAAGGTCATCTTCCTCCAAACACGTGTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: KETQRHLQGLFE*LKVIFLQTRVN Trigger: GTTGACACGTGTTTGGAGGAAGATGACCTTCAAGCACTCAAAGAGTCCCTGCAGATGTCTCTGAGTCTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028916.15 ENSMUST00000143573.8 |
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| CDS GCA 72 bp | AGAAAGTATCCATCAGCAGAATTCTGTCAGCTAGAATaGTACTGCTGTCCAGGAGTACAGGCTCTGGTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: RKYPSAEFCQLE*YCCPGVQALVV Trigger: GACCACCAGAGCCTGTACTCCTGGACAGCAGTAGCATTCTAGCTGACAGAATTCTGCTGATGGATACTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS CCA 72 bp | GAGACCGAGCACCTCTCTGGATCATGTACTCAATTGTaGAGAACTGGGGCATCAATTCAGCAGGTTGATTCA | + |
|
Preference number: 6 (lower is better) Translates to: ETEHLSGSCTQL*RTGASIQQVDS Trigger: TGAATCAACCTGCTGAATTGATGCCCCAGTTCTCCACAATTGAGTACATGATCCAGAGAGGTGCTCGGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028916.15 ENSMUST00000143573.8 ENSMUST00000155876.8 |
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| CDS CAA 72 bp | CTCAATTGTGGAGAACTGGGGCATCAATTCAGCAGGTaGATTCACCTCAGATATGCCTGCATATGCTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LNCGELGHQFSR*IHLRYACICWR Trigger: CCTCCAGCATATGCAGGCATATCTGAGGTGAATCAACCTGCTGAATTGATGCCCCAGTTCTCCACAATTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028916.15 ENSMUST00000143573.8 ENSMUST00000149697.3 ENSMUST00000155876.8 |
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| CDS GCA 72 bp | TTTCACATTCAGAGACACGCATGGACCAATGGCTCCTaGAATCTTCAGTTCCCGAGAGGTCTTTACATCCAA | + |
|
Preference number: 6 (lower is better) Translates to: FHIQRHAWTNGS*NLQFPRGLYIQ Trigger: TTGGATGTAAAGACCTCTCGGGAACTGAAGATTGCAGGAGCCATTGGTCCATGCGTGTCTCTGAATGTGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS CAA 90 bp | GATCATGTACTCAATTGTGGAGAACTGGGGCATCAATTCAGCAGGTaGATTCACCTCAGATATGCCTGCATATGCTGGAGGGAACTGATT | + |
|
Preference number: 6 (lower is better) Translates to: DHVLNCGELGHQFSR*IHLRYACICWRELI Trigger: AATCAGTTCCCTCCAGCATATGCAGGCATATCTGAGGTGAATCAACCTGCTGAATTGATGCCCCAGTTCTCCACAATTGAGTACATGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028916.15 ENSMUST00000143573.8 ENSMUST00000149697.3 ENSMUST00000155876.8 |
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| CDS CAA 72 bp | CCACTGGGCTATGGTCTCACCAAGGTAAATGACAATTaGGAAGAAAGTATCCATCAGCAGAATTCTGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PLGYGLTKVNDN*EESIHQQNSVS Trigger: GCTGACAGAATTCTGCTGATGGATACTTTCTTCCAAATTGTCATTTACCTTGGTGAGACCATAGCCCAGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS GCA 72 bp | CATCTCATAATGCTTGGTTGCCTTCTTCATGAATCGTaGGTTATCTTTCTCAATGTCGTGCCAGGAACGAAT | + |
|
Preference number: 6 (lower is better) Translates to: HLIMLGCLLHES*VIFLNVVPGTN Trigger: ATTCGTTCCTGGCACGACATTGAGAAAGATAACGCACGATTCATGAAGAAGGCAACCAAGCATTATGAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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| CDS GCA 72 bp | CATCAATTCAGCAGGTTGATTCACCTCAGATATGCCTaGATATGCTGGAGGGAACTGATTTCTTTGAAAACA | + |
|
Preference number: 6 (lower is better) Translates to: HQFSRLIHLRYA*ICWRELISLKT Trigger: TGTTTTCAAAGAAATCAGTTCCCTCCAGCATATGCAGGCATATCTGAGGTGAATCAACCTGCTGAATTGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028916.15 ENSMUST00000143573.8 ENSMUST00000149697.3 ENSMUST00000155876.8 |
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| CDS CAA 90 bp | GTCTTTACATCCAACGTAGCACCAAACGCCATTCTGAAATCTCCGTaGAAGTCTTTACTAAAAATTCTTTGGAATGTCTGCTTGAAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: VFTSNVAPNAILKSP*KSLLKILWNVCLKR Trigger: TCTTTTCAAGCAGACATTCCAAAGAATTTTTAGTAAAGACTTCAACGGAGATTTCAGAATGGCGTTTGGTGCTACGTTGGATGTAAAGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028916.15 |
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