Pregenerated sensors for SEC23A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020986Ensembl transcript IDs: ENSMUST00000021375.12, ENSMUST00000165134.2
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCGTCGTCTGATTGTGTTCATGCGGGTGCAGTCAGTCCCCACTGCTaGGCCCACCAGAGCACCCTTACATGTGCAGCACTTGATACATAC | + |
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Preference number: 1 (lower is better) Translates to: PSSDCVHAGAVSPHC*AHQSTLTCAALDTY Trigger: GTATGTATCAAGTGCTGCACATGTAAGGGTGCTCTGGTGGGCGCAGCAGTGGGGACTGACTGCACCCGCATGAACACAATCAGACGACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| 3UTR-3UTR TCA 90 bp | TGCGGGTGCAGTCAGTCCCCACTGCTGCGCCCACCAGAGCACCCTTACATGTGCCACCTCACACCAAACTaGCACAAAACAGGTTTAGAG | + |
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Preference number: 2 (lower is better) Translates to: CGCSQSPLLRPPEHPYMCHLTPN*HKTGLE Trigger: CTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTG...GCACATGTAAGGGTGCTCTGGTGGGCGCAGCAGTGGGGACTGACTGCACCCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| 3UTR-3UTR GCA 90 bp | GTTCATGCGGGTGCAGTCAGTCCCCACTGCTGCGCCCACCAGAGCACCCTTACATTCACATTTAATGTCTaGTGTGGGTTTATTACCTCA | + |
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Preference number: 2 (lower is better) Translates to: VHAGAVSPHCCAHQSTLTFTFNV*CGFITS Trigger: TGAGGTAATAAACCCACAGCAGACATTAAATGTGAA...TGTAAGGGTGCTCTGGTGGGCGCAGCAGTGGGGACTGACTGCACCCGCATGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| 3UTR-3UTR TCA 90 bp | CACCACCAGGGAGGGATGCAGATCTCTGTGAGCATGAGGTCACCCTGGTCTACTTACATGTGCAGCACTTaGTACATACATTTCATTGTC | + |
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Preference number: 2 (lower is better) Translates to: HHQGGMQISVSMRSPWSTYMCST*YIHFIV Trigger: GACAATGAAATGTATGTATCAAGTGCTGCACATGTA...AGTAGACCAGGGTGACCTCATGCTCACAGAGATCTGCATCCCTCCCTGGTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| 3UTR-3UTR CCA 90 bp | CACCACCAGGGAGGGATGCAGATCTCTGTGAGCATGAGGTCACCCTGGTCTACTCTATTGATTTGTTCCTaGCTCTTATTAAATAACCCC | + |
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Preference number: 2 (lower is better) Translates to: HHQGGMQISVSMRSPWSTLLICS*LLLNNP Trigger: GGGGTTATTTAATAAGAGCCAGGAACAAATCAATAG...AGTAGACCAGGGTGACCTCATGCTCACAGAGATCTGCATCCCTCCCTGGTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| 3UTR-3UTR CCA 90 bp | CACCACCAGGGAGGGATGCAGATCTCTGTGAGCATGAGGTCACCCTGGTCTACTATTTTATTGGCATTTTaGCCTAGCACAGTTCAATTC | + |
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Preference number: 2 (lower is better) Translates to: HHQGGMQISVSMRSPWSTILLAF*PSTVQF Trigger: GAATTGAACTGTGCTAGGCCAAAATGCCAATAAAAT...AGTAGACCAGGGTGACCTCATGCTCACAGAGATCTGCATCCCTCCCTGGTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| 3UTR-3UTR CAA 90 bp | CACCACCAGGGAGGGATGCAGATCTCTGTGAGCATGAGGTCACCCTGGTCTACTAGAGAGAGACCTCTGTaGTTTCCACAGATAAATGAA | + |
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Preference number: 3 (lower is better) Translates to: HHQGGMQISVSMRSPWSTRERPL*FPQINE Trigger: TTCATTTATCTGTGGAAACAACAGAGGTCTCTCTCT...AGTAGACCAGGGTGACCTCATGCTCACAGAGATCTGCATCCCTCCCTGGTGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| 3UTR TCA 72 bp | TATAATAACAATTTACGTTTCTGCTTCGCCGTCGTCTaGTTGTGTTCATGCGGGTGCAGTCAGTCCCCACTG | + |
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Preference number: 3 (lower is better) Translates to: YNNNLRFCFAVV*LCSCGCSQSPL Trigger: CAGTGGGGACTGACTGCACCCGCATGAACACAATCAGACGACGGCGAAGCAGAAACGTAAATTGTTATTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| 3UTR GCA 72 bp | GTCAGGGAGGATGCCCAGTGCCACTCTAGAGCTGTCTaGAGTATACAAATAAGTGGTATCTGTAATACAAAG | + |
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Preference number: 3 (lower is better) Translates to: VREDAQCHSRAV*SIQISGICNTK Trigger: CTTTGTATTACAGATACCACTTATTTGTATACTGCAGACAGCTCTAGAGTGGCACTGGGCATCCTCCCTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| 3UTR TCA 72 bp | ATCATCAACATTTTTCCATGTCACCTCACACCAAACTaGCACAAAACAGGTTTAGAGAGAGACCTCTGTTGT | + |
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Preference number: 3 (lower is better) Translates to: IINIFPCHLTPN*HKTGLERDLCC Trigger: ACAACAGAGGTCTCTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTGATGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| 3UTR-3UTR CAA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCAGAGAGAGACCTCTGTaGTTTCCACAGATAAATGAA | + |
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Preference number: 3 (lower is better) Translates to: YCIRQNKLVLIALIICFSRERPL*FPQINE Trigger: TTCATTTATCTGTGGAAACAACAGAGGTCTCTCTCT...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGCTGTCTGCAGTATACAAATAAGTGGTATCTGTAATACAAAGCAAACCATTTCAGGCAAAACAAACTaGTTCTCATTGCTCTCATTA | + |
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Preference number: 3 (lower is better) Translates to: RAVCSIQISGICNTKQTISGKTN*FSLLSL Trigger: TAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGA...AATGGTTTGCTTTGTATTACAGATACCACTTATTTGTATACTGCAGACAGCTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| CDS-3UTR GCA 90 bp | GTTCATGCGGGTGCAGTCAGTCCCCACTGCTGCGCCCACCAGAGCACCCTTACAGGCAAGTGGTCCTACTaGACAGGACAGGCTCGTACT | + |
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Preference number: 4 (lower is better) Translates to: VHAGAVSPHCCAHQSTLTGKWSY*TGQART Trigger: AGTACGAGCCTGTCCTGTGCAGTAGGACCACTTGCC...TGTAAGGGTGCTCTGGTGGGCGCAGCAGTGGGGACTGACTGCACCCGCATGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| CDS-3UTR GCA 90 bp | GTTCATGCGGGTGCAGTCAGTCCCCACTGCTGCGCCCACCAGAGCACCCTTACAGGTCACAAATTGGACTaGACCTCGTCCTCCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: VHAGAVSPHCCAHQSTLTGHKLD*TSSSLR Trigger: CCTCAAGGAGGACGAGGTGCAGTCCAATTTGTGACC...TGTAAGGGTGCTCTGGTGGGCGCAGCAGTGGGGACTGACTGCACCCGCATGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| CDS-3UTR CCA 90 bp | TGCGGGTGCAGTCAGTCCCCACTGCTGCGCCCACCAGAGCACCCTTACATGTGCAAACAGGGCTGCCACTaGGACAACCATTCTTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: CGCSQSPLLRPPEHPYMCKQGCH*DNHSCS Trigger: GCTACAAGAATGGTTGTCCCAGTGGCAGCCCTGTTT...GCACATGTAAGGGTGCTCTGGTGGGCGCAGCAGTGGGGACTGACTGCACCCGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| CDS-3UTR CCA 90 bp | TGCGGGTGCAGTCAGTCCCCACTGCTGCGCCCACCAGAGCACCCTTACATGTGCTCAACGACATCTGCATaGACTCCTTCAGAGCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: CGCSQSPLLRPPEHPYMCSTTSA*TPSEPA Trigger: TGCAGGCTCTGAAGGAGTCCATGCAGATGTCGTTGA...GCACATGTAAGGGTGCTCTGGTGGGCGCAGCAGTGGGGACTGACTGCACCCGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| CDS-3UTR TCA 90 bp | CACCACCAGGGAGGGATGCAGATCTCTGTGAGCATGAGGTCACCCTGGTCTACTGCGTCTCTGGCCACTTaGGTGCTGATACTGGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: HHQGGMQISVSMRSPWSTASLAT*VLILGH Trigger: GTGACCCAGTATCAGCACTCAAGTGGCCAGAGACGC...AGTAGACCAGGGTGACCTCATGCTCACAGAGATCTGCATCCCTCCCTGGTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| CDS-3UTR GCA 90 bp | TGCGGGTGCAGTCAGTCCCCACTGCTGCGCCCACCAGAGCACCCTTACATGTGCGCAAGCCCAGAGTTTTaGTCGATAATCCACTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: CGCSQSPLLRPPEHPYMCASPEF*SIIHLA Trigger: TGCCAAGTGGATTATCGAGCAAAACTCTGGGCTTGC...GCACATGTAAGGGTGCTCTGGTGGGCGCAGCAGTGGGGACTGACTGCACCCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| CDS-3UTR GCA 90 bp | TGCGGGTGCAGTCAGTCCCCACTGCTGCGCCCACCAGAGCACCCTTACATGTGCAGTCCCAGCATTTCCTaGAGTTGTTTGGCAGACAGA | + |
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Preference number: 4 (lower is better) Translates to: CGCSQSPLLRPPEHPYMCSPSIS*SCLADR Trigger: TCTGTCTGCCAAACAACTGCAGGAAATGCTGGGACT...GCACATGTAAGGGTGCTCTGGTGGGCGCAGCAGTGGGGACTGACTGCACCCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| CDS-3UTR TCA 90 bp | TGCGGGTGCAGTCAGTCCCCACTGCTGCGCCCACCAGAGCACCCTTACATGTGCTCAATGCTTGAAAACTaGGGTAAAAGCTCTGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: CGCSQSPLLRPPEHPYMCSMLEN*GKSSAG Trigger: GCCTGCAGAGCTTTTACCTCAGTTTTCAAGCATTGA...GCACATGTAAGGGTGCTCTGGTGGGCGCAGCAGTGGGGACTGACTGCACCCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| CDS-3UTR TCA 90 bp | GTTCATGCGGGTGCAGTCAGTCCCCACTGCTGCGCCCACCAGAGCACCCTTACAGAAGACATAGCTCTTTaGGATGCCTTCGCATCCAAG | + |
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Preference number: 4 (lower is better) Translates to: VHAGAVSPHCCAHQSTLTEDIAL*DAFASK Trigger: CTTGGATGCGAAGGCATCTCAAAGAGCTATGTCTTC...TGTAAGGGTGCTCTGGTGGGCGCAGCAGTGGGGACTGACTGCACCCGCATGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| CDS-3UTR GCA 90 bp | TGCGGGTGCAGTCAGTCCCCACTGCTGCGCCCACCAGAGCACCCTTACATGTGCGACTCCTTCAGAGCCTaGAAATCCTCATCTTCTATG | + |
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Preference number: 4 (lower is better) Translates to: CGCSQSPLLRPPEHPYMCDSFRA*KSSSSM Trigger: CATAGAAGATGAGGATTTGCAGGCTCTGAAGGAGTC...GCACATGTAAGGGTGCTCTGGTGGGCGCAGCAGTGGGGACTGACTGCACCCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| CDS-3UTR GCA 90 bp | TGCGGGTGCAGTCAGTCCCCACTGCTGCGCCCACCAGAGCACCCTTACATGTGCGATCTGCAAGAATGCTaGTGCTGTCTAGAAGAACTG | + |
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Preference number: 4 (lower is better) Translates to: CGCSQSPLLRPPEHPYMCDLQEC*CCLEEL Trigger: CAGTTCTTCTAGACAGCAGCAGCATTCTTGCAGATC...GCACATGTAAGGGTGCTCTGGTGGGCGCAGCAGTGGGGACTGACTGCACCCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| CDS-3UTR CCA 90 bp | CACCACCAGGGAGGGATGCAGATCTCTGTGAGCATGAGGTCACCCTGGTCTACTCGGTCTCTTTCCTTGTaGTACAGGCCAAGGGTCTCG | + |
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Preference number: 4 (lower is better) Translates to: HHQGGMQISVSMRSPWSTRSLSL*YRPRVS Trigger: CGAGACCCTTGGCCTGTACCACAAGGAAAGAGACCG...AGTAGACCAGGGTGACCTCATGCTCACAGAGATCTGCATCCCTCCCTGGTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| CDS-3UTR TCA 90 bp | CACCACCAGGGAGGGATGCAGATCTCTGTGAGCATGAGGTCACCCTGGTCTACTGCCAAACATTCCAACTaGACCGGACCCCATCTCGTT | + |
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Preference number: 4 (lower is better) Translates to: HHQGGMQISVSMRSPWSTAKHSN*TGPHLV Trigger: AACGAGATGGGGTCCGGTTCAGTTGGAATGTTTGGC...AGTAGACCAGGGTGACCTCATGCTCACAGAGATCTGCATCCCTCCCTGGTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| CDS-3UTR TCA 90 bp | CACCACCAGGGAGGGATGCAGATCTCTGTGAGCATGAGGTCACCCTGGTCTACTGCACCTCGTCCTCCTTaGGGAATTGGAGCATTATGC | + |
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Preference number: 4 (lower is better) Translates to: HHQGGMQISVSMRSPWSTAPRPP*GIGALC Trigger: GCATAATGCTCCAATTCCTCAAGGAGGACGAGGTGC...AGTAGACCAGGGTGACCTCATGCTCACAGAGATCTGCATCCCTCCCTGGTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| CDS-3UTR GCA 90 bp | GTTCATGCGGGTGCAGTCAGTCCCCACTGCTGCGCCCACCAGAGCACCCTTACATCCTTCTCAATGTCGTaGCAGGATCTTATAGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: VHAGAVSPHCCAHQSTLTSFSMS*QDLIGV Trigger: GACACCTATAAGATCCTGGCACGACATTGAGAAGGA...TGTAAGGGTGCTCTGGTGGGCGCAGCAGTGGGGACTGACTGCACCCGCATGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| CDS-3UTR GCA 90 bp | TGCGGGTGCAGTCAGTCCCCACTGCTGCGCCCACCAGAGCACCCTTACATGTGCTTGAGTTTGAGCATCTaGCCAGTTCCTAGCAATTGT | + |
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Preference number: 4 (lower is better) Translates to: CGCSQSPLLRPPEHPYMCLSLSI*PVPSNC Trigger: ACAATTGCTAGGAACTGGGCAGATGCTCAAACTCAA...GCACATGTAAGGGTGCTCTGGTGGGCGCAGCAGTGGGGACTGACTGCACCCGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| CDS-3UTR CCA 90 bp | GTTCATGCGGGTGCAGTCAGTCCCCACTGCTGCGCCCACCAGAGCACCCTTACATTTCCTGCAGTTGTTTaGCAGACAGATCCTTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: VHAGAVSPHCCAHQSTLTFPAVV*QTDPLF Trigger: GAACAAAGGATCTGTCTGCCAAACAACTGCAGGAAA...TGTAAGGGTGCTCTGGTGGGCGCAGCAGTGGGGACTGACTGCACCCGCATGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| CDS-3UTR CCA 90 bp | CACCACCAGGGAGGGATGCAGATCTCTGTGAGCATGAGGTCACCCTGGTCTACTTCCGAGCACCAGTGTTaGGGAAAGTACACTCAAGCA | + |
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Preference number: 4 (lower is better) Translates to: HHQGGMQISVSMRSPWSTSEHQC*GKYTQA Trigger: TGCTTGAGTGTACTTTCCCCAACACTGGTGCTCGGA...AGTAGACCAGGGTGACCTCATGCTCACAGAGATCTGCATCCCTCCCTGGTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| CDS-3UTR CCA 90 bp | GTTCATGCGGGTGCAGTCAGTCCCCACTGCTGCGCCCACCAGAGCACCCTTACACAACTTCAAAATATATaGCTAAGGTTGTGGTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: VHAGAVSPHCCAHQSTLTQLQNI*LRLWWG Trigger: GCCCCACCACAACCTTAGCCATATATTTTGAAGTTG...TGTAAGGGTGCTCTGGTGGGCGCAGCAGTGGGGACTGACTGCACCCGCATGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| CDS-3UTR CCA 90 bp | CACCACCAGGGAGGGATGCAGATCTCTGTGAGCATGAGGTCACCCTGGTCTACTTATTCTGGCATGTCCTaGTATCCTGACTTCCGCCAC | + |
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Preference number: 4 (lower is better) Translates to: HHQGGMQISVSMRSPWSTYSGMS*YPDFRH Trigger: GTGGCGGAAGTCAGGATACCAGGACATGCCAGAATA...AGTAGACCAGGGTGACCTCATGCTCACAGAGATCTGCATCCCTCCCTGGTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| CDS-3UTR TCA 90 bp | GTTCATGCGGGTGCAGTCAGTCCCCACTGCTGCGCCCACCAGAGCACCCTTACAGCATACATGTTATTATaGGTCTGTGAAGGGTTGACT | + |
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Preference number: 4 (lower is better) Translates to: VHAGAVSPHCCAHQSTLTAYMLL*VCEGLT Trigger: AGTCAACCCTTCACAGACTCATAATAACATGTATGC...TGTAAGGGTGCTCTGGTGGGCGCAGCAGTGGGGACTGACTGCACCCGCATGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| CDS-3UTR GCA 90 bp | CACCACCAGGGAGGGATGCAGATCTCTGTGAGCATGAGGTCACCCTGGTCTACTCATGAGAATGGCAGCTaGTTCCTGGTCAAAAGATGC | + |
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Preference number: 4 (lower is better) Translates to: HHQGGMQISVSMRSPWSTHENGS*FLVKRC Trigger: GCATCTTTTGACCAGGAAGCAGCTGCCATTCTCATG...AGTAGACCAGGGTGACCTCATGCTCACAGAGATCTGCATCCCTCCCTGGTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| CDS-3UTR TCA 90 bp | CACCACCAGGGAGGGATGCAGATCTCTGTGAGCATGAGGTCACCCTGGTCTACTTCAGATCCTGACGCATaGAATGGTGACGATAGTATG | + |
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Preference number: 4 (lower is better) Translates to: HHQGGMQISVSMRSPWSTSDPDA*NGDDSM Trigger: CATACTATCGTCACCATTTCATGCGTCAGGATCTGA...AGTAGACCAGGGTGACCTCATGCTCACAGAGATCTGCATCCCTCCCTGGTGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| CDS-3UTR GCA 90 bp | CACCACCAGGGAGGGATGCAGATCTCTGTGAGCATGAGGTCACCCTGGTCTACTGTGAAGAATCTCTTGTaGATCATCTACTGGGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: HHQGGMQISVSMRSPWSTVKNLL*IIYWGL Trigger: CAAGCCCCAGTAGATGATGCACAAGAGATTCTTCAC...AGTAGACCAGGGTGACCTCATGCTCACAGAGATCTGCATCCCTCCCTGGTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| CDS-3UTR TCA 90 bp | CACCACCAGGGAGGGATGCAGATCTCTGTGAGCATGAGGTCACCCTGGTCTACTATTGGAAATCTGGAGTaGAGAATCTCTTGTGCATCA | + |
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Preference number: 4 (lower is better) Translates to: HHQGGMQISVSMRSPWSTIGNLE*RISCAS Trigger: TGATGCACAAGAGATTCTTCACTCCAGATTTCCAAT...AGTAGACCAGGGTGACCTCATGCTCACAGAGATCTGCATCCCTCCCTGGTGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| CDS-3UTR CCA 90 bp | CACCACCAGGGAGGGATGCAGATCTCTGTGAGCATGAGGTCACCCTGGTCTACTTCCTCCTTGAGGAATTaGAGCATTATGCTGATTAAC | + |
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Preference number: 4 (lower is better) Translates to: HHQGGMQISVSMRSPWSTSSLRN*SIMLIN Trigger: GTTAATCAGCATAATGCTCCAATTCCTCAAGGAGGA...AGTAGACCAGGGTGACCTCATGCTCACAGAGATCTGCATCCCTCCCTGGTGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| CDS-3UTR TCA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGGCGTCTCTGGCCACTTaGGTGCTGATACTGGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: QHFSMSPHTKLTQNRFREASLAT*VLILGH Trigger: GTGACCCAGTATCAGCACTCAAGTGGCCAGAGACGC...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS-3UTR GCA 90 bp | CACCACCAGGGAGGGATGCAGATCTCTGTGAGCATGAGGTCACCCTGGTCTACTTTCCTGGTCAAAAGATaGAGCAATATTTTGGATTTG | + |
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Preference number: 4 (lower is better) Translates to: HHQGGMQISVSMRSPWSTFLVKR*SNILDL Trigger: CAAATCCAAAATATTGCTGCATCTTTTGACCAGGAA...AGTAGACCAGGGTGACCTCATGCTCACAGAGATCTGCATCCCTCCCTGGTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| CDS-3UTR CCA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGAGGACAGGCTCGTACTaGATGGGTGGTAGGTCGGGT | + |
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Preference number: 4 (lower is better) Translates to: QHFSMSPHTKLTQNRFRERTGSY*MGGRSG Trigger: ACCCGACCTACCACCCATCCAGTACGAGCCTGTCCT...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS-3UTR TCA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGGGCCAAGGGTCTCGCTaGAGTTCTCCCAGAAGATCT | + |
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Preference number: 4 (lower is better) Translates to: QHFSMSPHTKLTQNRFREGQGSR*SSPRRS Trigger: AGATCTTCTGGGAGAACTTCAGCGAGACCCTTGGCC...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS-3UTR GCA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGGGCAAGTGGTCCTACTaGACAGGACAGGCTCGTACT | + |
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Preference number: 4 (lower is better) Translates to: QHFSMSPHTKLTQNRFREGKWSY*TGQART Trigger: AGTACGAGCCTGTCCTGTGCAGTAGGACCACTTGCC...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS-3UTR CCA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGCGGTCTCTTTCCTTGTaGTACAGGCCAAGGGTCTCG | + |
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Preference number: 4 (lower is better) Translates to: QHFSMSPHTKLTQNRFRERSLSL*YRPRVS Trigger: CGAGACCCTTGGCCTGTACCACAAGGAAAGAGACCG...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS-3UTR TCA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGGCCAAACATTCCAACTaGACCGGACCCCATCTCGTT | + |
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Preference number: 4 (lower is better) Translates to: QHFSMSPHTKLTQNRFREAKHSN*TGPHLV Trigger: AACGAGATGGGGTCCGGTTCAGTTGGAATGTTTGGC...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS-3UTR TCA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGGGACCGCGTGTGGCTTaGGTAACAGGTACTTTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QHFSMSPHTKLTQNRFREGPRVA*VTGTLE Trigger: CTCTAAAGTACCTGTTACTCAAGCCACACGCGGTCC...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR GCA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGGGTCACAAATTGGACTaGACCTCGTCCTCCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QHFSMSPHTKLTQNRFREGHKLD*TSSSLR Trigger: CCTCAAGGAGGACGAGGTGCAGTCCAATTTGTGACC...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR CCA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGAAACTGCACGGCAAGTaGTCCTACTGCACAGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: QHFSMSPHTKLTQNRFREKLHGK*SYCTGQ Trigger: CTGTCCTGTGCAGTAGGACCACTTGCCGTGCAGTTT...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR CCA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGAAACAGGGCTGCCACTaGGACAACCATTCTTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: QHFSMSPHTKLTQNRFREKQGCH*DNHSCS Trigger: GCTACAAGAATGGTTGTCCCAGTGGCAGCCCTGTTT...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR CCA 90 bp | TTGATACATACATTTCATTGTCAGACTTATCTGCTCAGCAATGTAAACACTTGCAGGACAGGCTCGTACTaGATGGGTGGTAGGTCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LIHTFHCQTYLLSNVNTCRTGSY*MGGRSG Trigger: ACCCGACCTACCACCCATCCAGTACGAGCCTGTCCT...GCAAGTGTTTACATTGCTGAGCAGATAAGTCTGACAATGAAATGTATGTATCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
||
| CDS-3UTR CCA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGTCAACGACATCTGCATaGACTCCTTCAGAGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QHFSMSPHTKLTQNRFRESTTSA*TPSEPA Trigger: TGCAGGCTCTGAAGGAGTCCATGCAGATGTCGTTGA...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR CCA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGTCCGAGCACCAGTGTTaGGGAAAGTACACTCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QHFSMSPHTKLTQNRFRESEHQC*GKYTQA Trigger: TGCTTGAGTGTACTTTCCCCAACACTGGTGCTCGGA...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR TCA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGGAAGACATAGCTCTTTaGGATGCCTTCGCATCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QHFSMSPHTKLTQNRFREEDIAL*DAFASK Trigger: CTTGGATGCGAAGGCATCTCAAAGAGCTATGTCTTC...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR TCA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCGGCCAAGGGTCTCGCTaGAGTTCTCCCAGAAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: YCIRQNKLVLIALIICFSGQGSR*SSPRRS Trigger: AGATCTTCTGGGAGAACTTCAGCGAGACCCTTGGCC...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR TCA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGGAGTCTGTGAAGGGTTaGCTTTCGAAAGGAGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QHFSMSPHTKLTQNRFREESVKG*LSKGGN Trigger: GTTTCCTCCTTTCGAAAGTCAACCCTTCACAGACTC...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR GCA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGGGGGCTTGCAGAAGGTaGCGGAAATTCTCATATTCT | + |
|
Preference number: 4 (lower is better) Translates to: QHFSMSPHTKLTQNRFREGACRR*RKFSYS Trigger: AGAATATGAGAATTTCCGGCACCTTCTGCAAGCCCC...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR TCA 90 bp | AGAGCTGTCTGCAGTATACAAATAAGTGGTATCTGTAATACAAAGCAAACCATTTCGCATCCAAGCTCATaGACCTGCACCATTCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RAVCSIQISGICNTKQTISHPSS*TCTILP Trigger: TGGGAGAATGGTGCAGGTTCATGAGCTTGGATGCGA...AATGGTTTGCTTTGTATTACAGATACCACTTATTTGTATACTGCAGACAGCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
||
| CDS-3UTR TCA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCTCGCATCCAAGCTCATaGACCTGCACCATTCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YCIRQNKLVLIALIICFSSHPSS*TCTILP Trigger: TGGGAGAATGGTGCAGGTTCATGAGCTTGGATGCGA...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR TCA 90 bp | AGAGCTGTCTGCAGTATACAAATAAGTGGTATCTGTAATACAAAGCAAACCATTGGACCGCGTGTGGCTTaGGTAACAGGTACTTTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RAVCSIQISGICNTKQTIGPRVA*VTGTLE Trigger: CTCTAAAGTACCTGTTACTCAAGCCACACGCGGTCC...AATGGTTTGCTTTGTATTACAGATACCACTTATTTGTATACTGCAGACAGCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
||
| CDS-3UTR TCA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCGCACCTCGTCCTCCTTaGGGAATTGGAGCATTATGC | + |
|
Preference number: 4 (lower is better) Translates to: YCIRQNKLVLIALIICFSAPRPP*GIGALC Trigger: GCATAATGCTCCAATTCCTCAAGGAGGACGAGGTGC...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR TCA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGTCAGATCCTGACGCATaGAATGGTGACGATAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: QHFSMSPHTKLTQNRFRESDPDA*NGDDSM Trigger: CATACTATCGTCACCATTTCATGCGTCAGGATCTGA...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR GCA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGTTCTGCTCTGTATATTaGCAGCCTGGCCATGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QHFSMSPHTKLTQNRFREFCSVY*QPGHEN Trigger: ATTCTCATGGCCAGGCTGGCAATATACAGAGCAGAA...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR GCA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGGATCTGCAAGAATGCTaGTGCTGTCTAGAAGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: QHFSMSPHTKLTQNRFREDLQEC*CCLEEL Trigger: CAGTTCTTCTAGACAGCAGCAGCATTCTTGCAGATC...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR GCA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGGTGAAGAATCTCTTGTaGATCATCTACTGGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QHFSMSPHTKLTQNRFREVKNLL*IIYWGL Trigger: CAAGCCCCAGTAGATGATGCACAAGAGATTCTTCAC...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR CCA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGAACCAAAGCTGTAGGTaGCAAAAGGCTCAACGACAT | + |
|
Preference number: 4 (lower is better) Translates to: QHFSMSPHTKLTQNRFRENQSCR*QKAQRH Trigger: ATGTCGTTGAGCCTTTTGCCACCTACAGCTTTGGTT...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR TCA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGGATCCTTTGTTCCTCTaGAGACATAGCTCTTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QHFSMSPHTKLTQNRFREDPLFL*RHSSLR Trigger: TCTCAAAGAGCTATGTCTTCAGAGGAACAAAGGATC...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR GCA 90 bp | TTGATACATACATTTCATTGTCAGACTTATCTGCTCAGCAATGTAAACACTTGCAGGTGTAAACAGGGCTaGCACTGGGACAACCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LIHTFHCQTYLLSNVNTCRCKQG*HWDNHS Trigger: AGAATGGTTGTCCCAGTGGCAGCCCTGTTTACACCT...GCAAGTGTTTACATTGCTGAGCAGATAAGTCTGACAATGAAATGTATGTATCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
||
| CDS-3UTR GCA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCAGGTGTAAACAGGGCTaGCACTGGGACAACCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: YCIRQNKLVLIALIICFSRCKQG*HWDNHS Trigger: AGAATGGTTGTCCCAGTGGCAGCCCTGTTTACACCT...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR CCA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGCCCAGCATATGTAGGTaGAAACTGATTCCTTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QHFSMSPHTKLTQNRFREPSICR*KLIPLV Trigger: TACCAAAGGAATCAGTTTCCACCTACATATGCTGGG...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
||
| CDS-3UTR CCA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGAAAAGCTCTGCAGGCTaGTTCAATTCAGATATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QHFSMSPHTKLTQNRFREKSSAG*FNSDIP Trigger: TGGGATATCTGAATTGAACCAGCCTGCAGAGCTTTT...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
||
| CDS-3UTR CCA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGTTTCCTGCAGTTGTTTaGCAGACAGATCCTTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QHFSMSPHTKLTQNRFREFPAVV*QTDPLF Trigger: GAACAAAGGATCTGTCTGCCAAACAACTGCAGGAAA...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR CCA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGCAACTTCAAAATATATaGCTAAGGTTGTGGTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QHFSMSPHTKLTQNRFREQLQNI*LRLWWG Trigger: GCCCCACCACAACCTTAGCCATATATTTTGAAGTTG...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR CCA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCTATTCTGGCATGTCCTaGTATCCTGACTTCCGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: YCIRQNKLVLIALIICFSYSGMS*YPDFRH Trigger: GTGGCGGAAGTCAGGATACCAGGACATGCCAGAATA...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR TCA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGATGGTGACGATAGTATaGACTCTCATCAGGACTATT | + |
|
Preference number: 4 (lower is better) Translates to: QHFSMSPHTKLTQNRFREMVTIV*TLIRTI Trigger: AATAGTCCTGATGAGAGTTCATACTATCGTCACCAT...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR TCA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCGAGTCTGTGAAGGGTTaGCTTTCGAAAGGAGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: YCIRQNKLVLIALIICFSESVKG*LSKGGN Trigger: GTTTCCTCCTTTCGAAAGTCAACCCTTCACAGACTC...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR TCA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGGTTATTATGAGTCTGTaGAGGGTTGACTTTCGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QHFSMSPHTKLTQNRFREVIMSL*RVDFRK Trigger: CTTTCGAAAGTCAACCCTTCACAGACTCATAATAAC...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR GCA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCAGTCCCAGCATTTCCTaGAGTTGTTTGGCAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: YCIRQNKLVLIALIICFSSPSIS*SCLADR Trigger: TCTGTCTGCCAAACAACTGCAGGAAATGCTGGGACT...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR GCA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCCATGAGAATGGCAGCTaGTTCCTGGTCAAAAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: YCIRQNKLVLIALIICFSHENGS*FLVKRC Trigger: GCATCTTTTGACCAGGAAGCAGCTGCCATTCTCATG...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR GCA 90 bp | AGAGCTGTCTGCAGTATACAAATAAGTGGTATCTGTAATACAAAGCAAACCATTCCCTTCCTCTGTTTCTaGTCTGTATATTGCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RAVCSIQISGICNTKQTIPFLCF*SVYCQP Trigger: AGGCTGGCAATATACAGAGCAGAAACAGAGGAAGGG...AATGGTTTGCTTTGTATTACAGATACCACTTATTTGTATACTGCAGACAGCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
||
| CDS-3UTR GCA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCCCCTTCCTCTGTTTCTaGTCTGTATATTGCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YCIRQNKLVLIALIICFSPFLCF*SVYCQP Trigger: AGGCTGGCAATATACAGAGCAGAAACAGAGGAAGGG...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR CCA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGTCCTCCTTGAGGAATTaGAGCATTATGCTGATTAAC | + |
|
Preference number: 4 (lower is better) Translates to: QHFSMSPHTKLTQNRFRESSLRN*SIMLIN Trigger: GTTAATCAGCATAATGCTCCAATTCCTCAAGGAGGA...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR GCA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCGACTCCTTCAGAGCCTaGAAATCCTCATCTTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: YCIRQNKLVLIALIICFSDSFRA*KSSSSM Trigger: CATAGAAGATGAGGATTTGCAGGCTCTGAAGGAGTC...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR GCA 90 bp | TTGATACATACATTTCATTGTCAGACTTATCTGCTCAGCAATGTAAACACTTGCCATAGCTCTTTGAGATaGCTTCGCATCCAAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LIHTFHCQTYLLSNVNTCHSSLR*LRIQAH Trigger: ATGAGCTTGGATGCGAAGGCATCTCAAAGAGCTATG...GCAAGTGTTTACATTGCTGAGCAGATAAGTCTGACAATGAAATGTATGTATCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
||
| CDS-3UTR GCA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCCATAGCTCTTTGAGATaGCTTCGCATCCAAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YCIRQNKLVLIALIICFSHSSLR*LRIQAH Trigger: ATGAGCTTGGATGCGAAGGCATCTCAAAGAGCTATG...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR GCA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCTCCTTCTCAATGTCGTaGCAGGATCTTATAGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YCIRQNKLVLIALIICFSSFSMS*QDLIGV Trigger: GACACCTATAAGATCCTGGCACGACATTGAGAAGGA...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR GCA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCTTCTGCTCTGTATATTaGCAGCCTGGCCATGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: YCIRQNKLVLIALIICFSFCSVY*QPGHEN Trigger: ATTCTCATGGCCAGGCTGGCAATATACAGAGCAGAA...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR GCA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCTCCGATCTGCAAGAATaGTGCTGCTGTCTAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: YCIRQNKLVLIALIICFSSDLQE*CCCLEE Trigger: TTCTTCTAGACAGCAGCAGCATTCTTGCAGATCGGA...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCTGTCTGCAGTATACAAATAAGTGGTATCTGTAATACAAAGCAAACCATTAACCAAAGCTGTAGGTaGCAAAAGGCTCAACGACAT | + |
|
Preference number: 4 (lower is better) Translates to: RAVCSIQISGICNTKQTINQSCR*QKAQRH Trigger: ATGTCGTTGAGCCTTTTGCCACCTACAGCTTTGGTT...AATGGTTTGCTTTGTATTACAGATACCACTTATTTGTATACTGCAGACAGCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
||
| CDS-3UTR CCA 90 bp | TTGATACATACATTTCATTGTCAGACTTATCTGCTCAGCAATGTAAACACTTGCATGGCAGCTGCTTCCTaGTCAAAAGATGCAGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: LIHTFHCQTYLLSNVNTCMAAAS*SKDAAI Trigger: TATTGCTGCATCTTTTGACCAGGAAGCAGCTGCCAT...GCAAGTGTTTACATTGCTGAGCAGATAAGTCTGACAATGAAATGTATGTATCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
||
| CDS-3UTR CCA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCATGGCAGCTGCTTCCTaGTCAAAAGATGCAGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: YCIRQNKLVLIALIICFSMAAAS*SKDAAI Trigger: TATTGCTGCATCTTTTGACCAGGAAGCAGCTGCCAT...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR CCA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGAATGTATCTCGGCATTaGAAATCTGGAGTGAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QHFSMSPHTKLTQNRFRENVSRH*KSGVKN Trigger: ATTCTTCACTCCAGATTTCCAATGCCGAGATACATT...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR GCA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGAATCCTCATCTTCTATaGAAGTATCAACCACATAGA | + |
|
Preference number: 4 (lower is better) Translates to: QHFSMSPHTKLTQNRFRENPHLL*KYQPHR Trigger: TCTATGTGGTTGATACTTGCATAGAAGATGAGGATT...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR GCA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCTTGAGTTTGAGCATCTaGCCAGTTCCTAGCAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: YCIRQNKLVLIALIICFSLSLSI*PVPSNC Trigger: ACAATTGCTAGGAACTGGGCAGATGCTCAAACTCAA...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR GCA 90 bp | AGAGCTGTCTGCAGTATACAAATAAGTGGTATCTGTAATACAAAGCAAACCATTAGCAGCACTCGACACTaGAAGTTTCTTCAAATGATC | + |
|
Preference number: 4 (lower is better) Translates to: RAVCSIQISGICNTKQTISSTRH*KFLQMI Trigger: GATCATTTGAAGAAACTTGCAGTGTCGAGTGCTGCT...AATGGTTTGCTTTGTATTACAGATACCACTTATTTGTATACTGCAGACAGCTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
||
| CDS-3UTR GCA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCAGCAGCACTCGACACTaGAAGTTTCTTCAAATGATC | + |
|
Preference number: 4 (lower is better) Translates to: YCIRQNKLVLIALIICFSSSTRH*KFLQMI Trigger: GATCATTTGAAGAAACTTGCAGTGTCGAGTGCTGCT...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCTGTCTGCAGTATACAAATAAGTGGTATCTGTAATACAAAGCAAACCATTTCGGCATTGGAAATCTaGAGTGAAGAATCTCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RAVCSIQISGICNTKQTISALEI*SEESLV Trigger: CACAAGAGATTCTTCACTCCAGATTTCCAATGCCGA...AATGGTTTGCTTTGTATTACAGATACCACTTATTTGTATACTGCAGACAGCTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
||
| CDS-3UTR CCA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCTCGGCATTGGAAATCTaGAGTGAAGAATCTCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: YCIRQNKLVLIALIICFSSALEI*SEESLV Trigger: CACAAGAGATTCTTCACTCCAGATTTCCAATGCCGA...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR TCA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCATTGGAAATCTGGAGTaGAGAATCTCTTGTGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: YCIRQNKLVLIALIICFSIGNLE*RISCAS Trigger: TGATGCACAAGAGATTCTTCACTCCAGATTTCCAAT...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR TCA 90 bp | AGAGCTGTCTGCAGTATACAAATAAGTGGTATCTGTAATACAAAGCAAACCATTGTTATTATGAGTCTGTaGAGGGTTGACTTTCGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RAVCSIQISGICNTKQTIVIMSL*RVDFRK Trigger: CTTTCGAAAGTCAACCCTTCACAGACTCATAATAAC...AATGGTTTGCTTTGTATTACAGATACCACTTATTTGTATACTGCAGACAGCTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
||
| CDS-3UTR TCA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCGCATACATGTTATTATaGGTCTGTGAAGGGTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: YCIRQNKLVLIALIICFSAYMLL*VCEGLT Trigger: AGTCAACCCTTCACAGACTCATAATAACATGTATGC...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR TCA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCAAGAGAAAATGTTTCTaGAAACCGGAAGGAATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YCIRQNKLVLIALIICFSKRKCF*KPEGIW Trigger: CCAAATTCCTTCCGGTTTTCAGAAACATTTTCTCTT...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR GCA 90 bp | TTGATACATACATTTCATTGTCAGACTTATCTGCTCAGCAATGTAAACACTTGCGCCAACGCTTCAAAATaGTTAGTTCCCTTTTTAACA | + |
|
Preference number: 4 (lower is better) Translates to: LIHTFHCQTYLLSNVNTCANASK*LVPFLT Trigger: TGTTAAAAAGGGAACTAAGCATTTTGAAGCGTTGGC...GCAAGTGTTTACATTGCTGAGCAGATAAGTCTGACAATGAAATGTATGTATCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
||
| CDS-3UTR GCA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCGCCAACGCTTCAAAATaGTTAGTTCCCTTTTTAACA | + |
|
Preference number: 4 (lower is better) Translates to: YCIRQNKLVLIALIICFSANASK*LVPFLT Trigger: TGTTAAAAAGGGAACTAAGCATTTTGAAGCGTTGGC...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCTGTCTGCAGTATACAAATAAGTGGTATCTGTAATACAAAGCAAACCATTAATGTATCTCGGCATTaGAAATCTGGAGTGAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RAVCSIQISGICNTKQTINVSRH*KSGVKN Trigger: ATTCTTCACTCCAGATTTCCAATGCCGAGATACATT...AATGGTTTGCTTTGTATTACAGATACCACTTATTTGTATACTGCAGACAGCTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
||
| CDS-3UTR GCA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCTTCCTGGTCAAAAGATaGAGCAATATTTTGGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: YCIRQNKLVLIALIICFSFLVKR*SNILDL Trigger: CAAATCCAAAATATTGCTGCATCTTTTGACCAGGAA...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR CAA 90 bp | GTTCATGCGGGTGCAGTCAGTCCCCACTGCTGCGCCCACCAGAGCACCCTTACATGCACCTCGTCCTCCTaGAGGAATTGGAGCATTATG | + |
|
Preference number: 5 (lower is better) Translates to: VHAGAVSPHCCAHQSTLTCTSSS*RNWSIM Trigger: CATAATGCTCCAATTCCTCAAGGAGGACGAGGTGCA...TGTAAGGGTGCTCTGGTGGGCGCAGCAGTGGGGACTGACTGCACCCGCATGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
||
| CDS TCA 90 bp | GAAAGTACACTCAAGCAGTCCCACAGCTATGGAAAGCGCCACTCCTaGGGAACGCAGCGGTCTCTTTCCTTGTGGTACAGGCCAAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ESTLKQSHSYGKRHS*GTQRSLSLWYRPRV Trigger: GACCCTTGGCCTGTACCACAAGGAAAGAGACCGCTGCGTTCCTCAGGAGTGGCGCTTTCCATAGCTGTGGGACTGCTTGAGTGTACTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS TCA 90 bp | TGCTCCGGACTCCTGCCCCCAGGCATACATGTTATTATGAGTCTGTaGAGGGTTGACTTTCGAAAGGAGGAAACGAGCCTGGCTGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: CSGLLPPGIHVIMSL*RVDFRKEETSLAAT Trigger: GGTGGCAGCCAGGCTCGTTTCCTCCTTTCGAAAGTCAACCCTTCACAGACTCATAATAACATGTATGCCTGGGGGCAGGAGTCCGGAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS GCA 90 bp | CCACTTGGCATAAAGGATTCAAAACTGCACGGCAAGTGGTCCTACTaGACAGGACAGGCTCGTACTGGATGGGTGGTAGGTCGGGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PLGIKDSKLHGKWSY*TGQARTGWVVGRVS Trigger: AGAGACCCGACCTACCACCCATCCAGTACGAGCCTGTCCTGTGCAGTAGGACCACTTGCCGTGCAGTTTTGAATCCTTTATGCCAAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS TCA 90 bp | ACTCCTGCCCCCAGGCATACATGTTATTATGAGTCTGTGAAGGGTTaGCTTTCGAAAGGAGGAAACGAGCCTGGCTGCCACCATGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: TPAPRHTCYYESVKG*LSKGGNEPGCHHAP Trigger: CGGAGCATGGTGGCAGCCAGGCTCGTTTCCTCCTTTCGAAAGTCAACCCTTCACAGACTCATAATAACATGTATGCCTGGGGGCAGGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR CAA 90 bp | TGCGGGTGCAGTCAGTCCCCACTGCTGCGCCCACCAGAGCACCCTTACATGTGCAGATGCAGCAATATTTaGGATTTGAGTTTGAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: CGCSQSPLLRPPEHPYMCRCSNI*DLSLSI Trigger: GATGCTCAAACTCAAATCCAAAATATTGCTGCATCT...GCACATGTAAGGGTGCTCTGGTGGGCGCAGCAGTGGGGACTGACTGCACCCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
||
| CDS-3UTR CAA 90 bp | TGCGGGTGCAGTCAGTCCCCACTGCTGCGCCCACCAGAGCACCCTTACATGTGCATACTCTCCAAATTTTaGACACAGTCGAATGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CGCSQSPLLRPPEHPYMCILSKF*TQSNEL Trigger: CAACTCATTCGACTGTGTCAAAAATTTGGAGAGTAT...GCACATGTAAGGGTGCTCTGGTGGGCGCAGCAGTGGGGACTGACTGCACCCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
||
| CDS-3UTR CAA 90 bp | GTTCATGCGGGTGCAGTCAGTCCCCACTGCTGCGCCCACCAGAGCACCCTTACAAAAACCGGAAGGAATTaGGATCATCTTTGTGATACT | + |
|
Preference number: 5 (lower is better) Translates to: VHAGAVSPHCCAHQSTLTKTGRN*DHLCDT Trigger: AGTATCACAAAGATGATCCAAATTCCTTCCGGTTTT...TGTAAGGGTGCTCTGGTGGGCGCAGCAGTGGGGACTGACTGCACCCGCATGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
||
| CDS TCA 90 bp | AGAATTGGTGCTCCGGACTCCTGCCCCCAGGCATACATGTTATTATaGGTCTGTGAAGGGTTGACTTTCGAAAGGAGGAAACGAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RIGAPDSCPQAYMLL*VCEGLTFERRKRAW Trigger: CCAGGCTCGTTTCCTCCTTTCGAAAGTCAACCCTTCACAGACTCATAATAACATGTATGCCTGGGGGCAGGAGTCCGGAGCACCAATTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS CCA 90 bp | CTCGATAATCCACTTGGCATAAAGGATTCAAAACTGCACGGCAAGTaGTCCTACTGCACAGGACAGGCTCGTACTGGATGGGTGGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LDNPLGIKDSKLHGK*SYCTGQARTGWVVG Trigger: ACCTACCACCCATCCAGTACGAGCCTGTCCTGTGCAGTAGGACCACTTGCCGTGCAGTTTTGAATCCTTTATGCCAAGTGGATTATCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS CCA 90 bp | CTGCACCATTCTCCCAAAGGTAATAAGTCCAACCAAAGCTGTAGGTaGCAAAAGGCTCAACGACATCTGCATGGACTCCTTCAGAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LHHSPKGNKSNQSCR*QKAQRHLHGLLQSL Trigger: CAGGCTCTGAAGGAGTCCATGCAGATGTCGTTGAGCCTTTTGCCACCTACAGCTTTGGTTGGACTTATTACCTTTGGGAGAATGGTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR CAA 90 bp | CACCACCAGGGAGGGATGCAGATCTCTGTGAGCATGAGGTCACCCTGGTCTACTTTAACATATTTGGCATaGTCCTTCTCAATGTCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: HHQGGMQISVSMRSPWSTLTYLA*SFSMSC Trigger: GCACGACATTGAGAAGGACAATGCCAAATATGTTAA...AGTAGACCAGGGTGACCTCATGCTCACAGAGATCTGCATCCCTCCCTGGTGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
||
| CDS TCA 90 bp | GAACGCAGCGGTCTCTTTCCTTGTGGTACAGGCCAAGGGTCTCGCTaGAGTTCTCCCAGAAGATCTGTGAGATTCATGTCTATTTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ERSGLFPCGTGQGSR*SSPRRSVRFMSIFC Trigger: ACAGAAAATAGACATGAATCTCACAGATCTTCTGGGAGAACTTCAGCGAGACCCTTGGCCTGTACCACAAGGAAAGAGACCGCTGCGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS TCA 90 bp | CTGGCCCTTCCTCTGTTTCTGCTCTGTATATTGCCAGCCTGGCCATaGGAATGGCAGCTGCTTCCTGGTCAAAAGATGCAGCAATATTTT | + |
|
Preference number: 5 (lower is better) Translates to: LALPLFLLCILPAWP*EWQLLPGQKMQQYF Trigger: AAAATATTGCTGCATCTTTTGACCAGGAAGCAGCTGCCATTCTCATGGCCAGGCTGGCAATATACAGAGCAGAAACAGAGGAAGGGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS GCA 90 bp | TGCCAGCCTGGCCATGAGAATGGCAGCTGCTTCCTGGTCAAAAGATaGAGCAATATTTTGGATTTGAGTTTGAGCATCTGCCCAGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CQPGHENGSCFLVKR*SNILDLSLSICPVP Trigger: AGGAACTGGGCAGATGCTCAAACTCAAATCCAAAATATTGCTGCATCTTTTGACCAGGAAGCAGCTGCCATTCTCATGGCCAGGCTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR CAA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGATTGGAAGGAGGCGGTaGCTGTACCTGAGGACCGCG | + |
|
Preference number: 5 (lower is better) Translates to: QHFSMSPHTKLTQNRFREIGRRR*LYLRTA Trigger: CGCGGTCCTCAGGTACAGCAACCGCCTCCTTCCAAT...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS TCA 90 bp | CCAGCATTTCCTGCAGTTGTTTGGCAGACAGATCCTTTGTTCCTCTaGAGACATAGCTCTTTGAGATGCCTTCGCATCCAAGCTCATGAA | + |
|
Preference number: 5 (lower is better) Translates to: PAFPAVVWQTDPLFL*RHSSLRCLRIQAHE Trigger: TTCATGAGCTTGGATGCGAAGGCATCTCAAAGAGCTATGTCTTCAGAGGAACAAAGGATCTGTCTGCCAAACAACTGCAGGAAATGCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS TCA 90 bp | GTGGTACAGGCCAAGGGTCTCGCTGAAGTTCTCCCAGAAGATCTGTaGGATTCATGTCTATTTTCTGTACTGGCTGTAAGAATCTATTGG | + |
|
Preference number: 5 (lower is better) Translates to: VVQAKGLAEVLPEDL*DSCLFSVLAVRIYW Trigger: CCAATAGATTCTTACAGCCAGTACAGAAAATAGACATGAATCTCACAGATCTTCTGGGAGAACTTCAGCGAGACCCTTGGCCTGTACCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR CAA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCATTGGAAGGAGGCGGTaGCTGTACCTGAGGACCGCG | + |
|
Preference number: 5 (lower is better) Translates to: YCIRQNKLVLIALIICFSIGRRR*LYLRTA Trigger: CGCGGTCCTCAGGTACAGCAACCGCCTCCTTCCAAT...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR CAA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGATCCGAGCACCAGTGTaGGGGAAAGTACACTCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: QHFSMSPHTKLTQNRFREIRAPV*GKVHSS Trigger: GCTTGAGTGTACTTTCCCCAACACTGGTGCTCGGAT...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR CAA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGATACTGGGTCACAAATaGGACTGCACCTCGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QHFSMSPHTKLTQNRFREILGHK*DCTSSS Trigger: GGAGGACGAGGTGCAGTCCAATTTGTGACCCAGTAT...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS TCA 90 bp | TTGGATCATCTTTGTGATACTCTCCAAATTTTTGACACAGTCGAATaGGTTGTCTGTCCAACCATCTTAGCACGTCTGGCCCTTCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LDHLCDTLQIFDTVE*VVCPTILARLALPL Trigger: CAGAGGAAGGGCCAGACGTGCTAAGATGGTTGGACAGACAACTCATTCGACTGTGTCAAAAATTTGGAGAGTATCACAAAGATGATCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR CAA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCCAGCGGTCTCTTTCCTaGTGGTACAGGCCAAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: YCIRQNKLVLIALIICFSQRSLS*WYRPRV Trigger: GACCCTTGGCCTGTACCACAAGGAAAGAGACCGCTG...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR CAA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGTGCACCTCGTCCTCCTaGAGGAATTGGAGCATTATG | + |
|
Preference number: 5 (lower is better) Translates to: QHFSMSPHTKLTQNRFRECTSSS*RNWSIM Trigger: CATAATGCTCCAATTCCTCAAGGAGGACGAGGTGCA...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR CAA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGGGAGTGAAGAATCTCTaGTGCATCATCTACTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QHFSMSPHTKLTQNRFREGVKNL*CIIYWG Trigger: GCCCCAGTAGATGATGCACAAGAGATTCTTCACTCC...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR CAA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGCAGCATTTCCTGCAGTaGTTTGGCAGACAGATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: QHFSMSPHTKLTQNRFREQHFLQ*FGRQIL Trigger: AAGGATCTGTCTGCCAAACAACTGCAGGAAATGCTG...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR CAA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCATCCGAGCACCAGTGTaGGGGAAAGTACACTCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: YCIRQNKLVLIALIICFSIRAPV*GKVHSS Trigger: GCTTGAGTGTACTTTCCCCAACACTGGTGCTCGGAT...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
||
| CDS-3UTR CAA 90 bp | AGAGCTGTCTGCAGTATACAAATAAGTGGTATCTGTAATACAAAGCAAACCATTATACTGGGTCACAAATaGGACTGCACCTCGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RAVCSIQISGICNTKQTIILGHK*DCTSSS Trigger: GGAGGACGAGGTGCAGTCCAATTTGTGACCCAGTAT...AATGGTTTGCTTTGTATTACAGATACCACTTATTTGTATACTGCAGACAGCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| CDS-3UTR CAA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGACCACGCTGATTCCTTaGGTAACAAAAGTTGCAAGC | + |
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Preference number: 5 (lower is better) Translates to: QHFSMSPHTKLTQNRFRETTLIP*VTKVAS Trigger: GCTTGCAACTTTTGTTACCAAAGGAATCAGCGTGGT...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165134.2 |
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| CDS-3UTR CAA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGATTTCCTGCAGTTGTTaGGCAGACAGATCCTTTGTT | + |
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Preference number: 5 (lower is better) Translates to: QHFSMSPHTKLTQNRFREISCSC*ADRSFV Trigger: AACAAAGGATCTGTCTGCCAAACAACTGCAGGAAAT...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS-3UTR CAA 90 bp | TTGATACATACATTTCATTGTCAGACTTATCTGCTCAGCAATGTAAACACTTGCAGGACCGCGTGTGGCTaGAGTAACAGGTACTTTAGA | + |
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Preference number: 5 (lower is better) Translates to: LIHTFHCQTYLLSNVNTCRTACG*SNRYFR Trigger: TCTAAAGTACCTGTTACTCAAGCCACACGCGGTCCT...GCAAGTGTTTACATTGCTGAGCAGATAAGTCTGACAATGAAATGTATGTATCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| CDS-3UTR CAA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCGGCTGTAAGAATCTATaGGAAGGAGGCGGTTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: YCIRQNKLVLIALIICFSGCKNL*EGGGCC Trigger: ACAGCAACCGCCTCCTTCCAATAGATTCTTACAGCC...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS-3UTR CAA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCGGAGTGAAGAATCTCTaGTGCATCATCTACTGGGGC | + |
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Preference number: 5 (lower is better) Translates to: YCIRQNKLVLIALIICFSGVKNL*CIIYWG Trigger: GCCCCAGTAGATGATGCACAAGAGATTCTTCACTCC...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS-3UTR CAA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGCAATGTATCTCGGCATaGGAAATCTGGAGTGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: QHFSMSPHTKLTQNRFREQCISA*EIWSEE Trigger: TTCTTCACTCCAGATTTCCAATGCCGAGATACATTG...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS-3UTR CAA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCCAGCATTTCCTGCAGTaGTTTGGCAGACAGATCCTT | + |
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Preference number: 5 (lower is better) Translates to: YCIRQNKLVLIALIICFSQHFLQ*FGRQIL Trigger: AAGGATCTGTCTGCCAAACAACTGCAGGAAATGCTG...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS-3UTR CAA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGAGCAATATTTTGGATTaGAGTTTGAGCATCTGCCCA | + |
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Preference number: 5 (lower is better) Translates to: QHFSMSPHTKLTQNRFRESNILD*SLSICP Trigger: TGGGCAGATGCTCAAACTCAAATCCAAAATATTGCT...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS-3UTR CAA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGTTGAATAAGGAAGTATaGAAAGAGTCACCCATTACC | + |
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Preference number: 5 (lower is better) Translates to: QHFSMSPHTKLTQNRFRELNKEV*KESPIT Trigger: GGTAATGGGTGACTCTTTCAATACTTCCTTATTCAA...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS-3UTR CAA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGAGATGCAGCAATATTTaGGATTTGAGTTTGAGCATC | + |
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Preference number: 5 (lower is better) Translates to: QHFSMSPHTKLTQNRFRERCSNI*DLSLSI Trigger: GATGCTCAAACTCAAATCCAAAATATTGCTGCATCT...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS-3UTR CAA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGATACTCTCCAAATTTTaGACACAGTCGAATGAGTTG | + |
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Preference number: 5 (lower is better) Translates to: QHFSMSPHTKLTQNRFREILSKF*TQSNEL Trigger: CAACTCATTCGACTGTGTCAAAAATTTGGAGAGTAT...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS-3UTR CAA 90 bp | CAACATTTTTCCATGTCACCTCACACCAAACTGACACAAAACAGGTTTAGAGAGAAAACCGGAAGGAATTaGGATCATCTTTGTGATACT | + |
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Preference number: 5 (lower is better) Translates to: QHFSMSPHTKLTQNRFREKTGRN*DHLCDT Trigger: AGTATCACAAAGATGATCCAAATTCCTTCCGGTTTT...CTCTCTAAACCTGTTTTGTGTCAGTTTGGTGTGAGGTGACATGGAAAAATGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS-3UTR CAA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCATTTCCTGCAGTTGTTaGGCAGACAGATCCTTTGTT | + |
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Preference number: 5 (lower is better) Translates to: YCIRQNKLVLIALIICFSISCSC*ADRSFV Trigger: AACAAAGGATCTGTCTGCCAAACAACTGCAGGAAAT...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS-3UTR CAA 90 bp | TTGATACATACATTTCATTGTCAGACTTATCTGCTCAGCAATGTAAACACTTGCATTTTGGATTTGAGTTaGAGCATCTGCCCAGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: LIHTFHCQTYLLSNVNTCILDLS*SICPVP Trigger: AGGAACTGGGCAGATGCTCAAACTCAAATCCAAAAT...GCAAGTGTTTACATTGCTGAGCAGATAAGTCTGACAATGAAATGTATGTATCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| CDS-3UTR CAA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCATTTTGGATTTGAGTTaGAGCATCTGCCCAGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: YCIRQNKLVLIALIICFSILDLS*SICPVP Trigger: AGGAACTGGGCAGATGCTCAAACTCAAATCCAAAAT...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS-3UTR CAA 90 bp | TTGATACATACATTTCATTGTCAGACTTATCTGCTCAGCAATGTAAACACTTGCCAATGTATCTCGGCATaGGAAATCTGGAGTGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: LIHTFHCQTYLLSNVNTCQCISA*EIWSEE Trigger: TTCTTCACTCCAGATTTCCAATGCCGAGATACATTG...GCAAGTGTTTACATTGCTGAGCAGATAAGTCTGACAATGAAATGTATGTATCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021375.12 |
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| CDS-3UTR CAA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCTTAACATATTTGGCATaGTCCTTCTCAATGTCGTGC | + |
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Preference number: 5 (lower is better) Translates to: YCIRQNKLVLIALIICFSLTYLA*SFSMSC Trigger: GCACGACATTGAGAAGGACAATGCCAAATATGTTAA...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS-3UTR CAA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCAGCAATATTTTGGATTaGAGTTTGAGCATCTGCCCA | + |
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Preference number: 5 (lower is better) Translates to: YCIRQNKLVLIALIICFSSNILD*SLSICP Trigger: TGGGCAGATGCTCAAACTCAAATCCAAAATATTGCT...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS-3UTR CAA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCCCCTTTTTAACATATTaGGCATTGTCCTTCTCAATG | + |
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Preference number: 5 (lower is better) Translates to: YCIRQNKLVLIALIICFSPFLTY*ALSFSM Trigger: CATTGAGAAGGACAATGCCAAATATGTTAAAAAGGG...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS-3UTR CAA 90 bp | TACTGTATCAGGCAAAACAAACTTGTTCTCATTGCTCTCATTATATGTTTCAGCTTGAATAAGGAAGTATaGAAAGAGTCACCCATTACC | + |
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Preference number: 5 (lower is better) Translates to: YCIRQNKLVLIALIICFSLNKEV*KESPIT Trigger: GGTAATGGGTGACTCTTTCAATACTTCCTTATTCAA...GCTGAAACATATAATGAGAGCAATGAGAACAAGTTTGTTTTGCCTGATACAGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS CCA 72 bp | CGGCAAGTGGTCCTACTGCACAGGACAGGCTCGTACTaGATGGGTGGTAGGTCGGGTCTCTCCTTCAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: RQVVLLHRTGSY*MGGRSGLSFRG Trigger: ACCTCTGAAGGAGAGACCCGACCTACCACCCATCCAGTACGAGCCTGTCCTGTGCAGTAGGACCACTTGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS TCA 72 bp | CTCAAGCAGTCCCACAGCTATGGAAAGCGCCACTCCTaGGGAACGCAGCGGTCTCTTTCCTTGTGGTACAGG | + |
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Preference number: 6 (lower is better) Translates to: LKQSHSYGKRHS*GTQRSLSLWYR Trigger: CCTGTACCACAAGGAAAGAGACCGCTGCGTTCCTCAGGAGTGGCGCTTTCCATAGCTGTGGGACTGCTTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS CCA 72 bp | CCACTTGGCATAAAGGATTCAAAACTGCACGGCAAGTaGTCCTACTGCACAGGACAGGCTCGTACTGGATGG | + |
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Preference number: 6 (lower is better) Translates to: PLGIKDSKLHGK*SYCTGQARTGW Trigger: CCATCCAGTACGAGCCTGTCCTGTGCAGTAGGACCACTTGCCGTGCAGTTTTGAATCCTTTATGCCAAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS CAA 72 bp | GGACCACCGATGAACATCATGATCCGAGCACCAGTGTaGGGGAAAGTACACTCAAGCAGTCCCACAGCTATG | + |
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Preference number: 6 (lower is better) Translates to: GPPMNIMIRAPV*GKVHSSSPTAM Trigger: CATAGCTGTGGGACTGCTTGAGTGTACTTTCCCCAACACTGGTGCTCGGATCATGATGTTCATCGGTGGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS TCA 72 bp | GGTCTCTTTCCTTGTGGTACAGGCCAAGGGTCTCGCTaGAGTTCTCCCAGAAGATCTGTGAGATTCATGTCT | + |
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Preference number: 6 (lower is better) Translates to: GLFPCGTGQGSR*SSPRRSVRFMS Trigger: AGACATGAATCTCACAGATCTTCTGGGAGAACTTCAGCGAGACCCTTGGCCTGTACCACAAGGAAAGAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS TCA 72 bp | CCCAGGCATACATGTTATTATGAGTCTGTGAAGGGTTaGCTTTCGAAAGGAGGAAACGAGCCTGGCTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: PRHTCYYESVKG*LSKGGNEPGCH Trigger: GTGGCAGCCAGGCTCGTTTCCTCCTTTCGAAAGTCAACCCTTCACAGACTCATAATAACATGTATGCCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS TCA 72 bp | CTCCTGCCCCCAGGCATACATGTTATTATGAGTCTGTaGAGGGTTGACTTTCGAAAGGAGGAAACGAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LLPPGIHVIMSL*RVDFRKEETSL Trigger: CAGGCTCGTTTCCTCCTTTCGAAAGTCAACCCTTCACAGACTCATAATAACATGTATGCCTGGGGGCAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS TCA 72 bp | GCTCCGGACTCCTGCCCCCAGGCATACATGTTATTATaGGTCTGTGAAGGGTTGACTTTCGAAAGGAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: APDSCPQAYMLL*VCEGLTFERRK Trigger: TTTCCTCCTTTCGAAAGTCAACCCTTCACAGACTCATAATAACATGTATGCCTGGGGGCAGGAGTCCGGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS GCA 72 bp | ACCAAAGCTGTAGGTGGCAAAAGGCTCAACGACATCTaGATGGACTCCTTCAGAGCCTGCAAATCCTCATCT | + |
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Preference number: 6 (lower is better) Translates to: TKAVGGKRLNDI*MDSFRACKSSS Trigger: AGATGAGGATTTGCAGGCTCTGAAGGAGTCCATGCAGATGTCGTTGAGCCTTTTGCCACCTACAGCTTTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS CCA 72 bp | AGAAGGTGCCGGAAATTCTCATATTCTGGCATGTCCTaGTATCCTGACTTCCGCCACTGTGCTATAGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: RRCRKFSYSGMS*YPDFRHCAIVS Trigger: TGAGACTATAGCACAGTGGCGGAAGTCAGGATACCAGGACATGCCAGAATATGAGAATTTCCGGCACCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS TCA 72 bp | TCCGTGTCAATGTATCTCGGCATTGGAAATCTGGAGTaGAGAATCTCTTGTGCATCATCTACTGGGGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: SVSMYLGIGNLE*RISCASSTGAC Trigger: GCAAGCCCCAGTAGATGATGCACAAGAGATTCTTCACTCCAGATTTCCAATGCCGAGATACATTGACACGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS CCA 72 bp | TCTCCCAAAGGTAATAAGTCCAACCAAAGCTGTAGGTaGCAAAAGGCTCAACGACATCTGCATGGACTCCTT | + |
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Preference number: 6 (lower is better) Translates to: SPKGNKSNQSCR*QKAQRHLHGLL Trigger: AAGGAGTCCATGCAGATGTCGTTGAGCCTTTTGCCACCTACAGCTTTGGTTGGACTTATTACCTTTGGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS GCA 72 bp | GGCCATGAGAATGGCAGCTGCTTCCTGGTCAAAAGATaGAGCAATATTTTGGATTTGAGTTTGAGCATCTGC | + |
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Preference number: 6 (lower is better) Translates to: GHENGSCFLVKR*SNILDLSLSIC Trigger: GCAGATGCTCAAACTCAAATCCAAAATATTGCTGCATCTTTTGACCAGGAAGCAGCTGCCATTCTCATGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS GCA 72 bp | TCTGTATATTGCCAGCCTGGCCATGAGAATGGCAGCTaGTTCCTGGTCAAAAGATGCAGCAATATTTTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SVYCQPGHENGS*FLVKRCSNILD Trigger: ATCCAAAATATTGCTGCATCTTTTGACCAGGAAGCAGCTGCCATTCTCATGGCCAGGCTGGCAATATACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS TCA 72 bp | CTTTGTGATACTCTCCAAATTTTTGACACAGTCGAATaGGTTGTCTGTCCAACCATCTTAGCACGTCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LCDTLQIFDTVE*VVCPTILARLA Trigger: GGCCAGACGTGCTAAGATGGTTGGACAGACAACTCATTCGACTGTGTCAAAAATTTGGAGAGTATCACAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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| CDS CAA 72 bp | ATACTGGGTCACAAATTGGACTGCACCTCGTCCTCCTaGAGGAATTGGAGCATTATGCTGATTAACAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: ILGHKLDCTSSS*RNWSIMLINNF Trigger: GAAGTTGTTAATCAGCATAATGCTCCAATTCCTCAAGGAGGACGAGGTGCAGTCCAATTTGTGACCCAGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021375.12 ENSMUST00000165134.2 |
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