Pregenerated sensors for SEC22C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061536Ensembl transcript IDs: ENSMUST00000078547.12, ENSMUST00000111560.10, ENSMUST00000139193.2, ENSMUST00000154978.3, ENSMUST00000215056.2
Found 191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCAGGTGTTCCTCAGCCCGTGCAGGTACGCATTGCCCAGGCAGATaGAGGCCAGCATCAGCAGCACCTTCAGCGTCCGGGCTGGACTGT | + |
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Preference number: 1 (lower is better) Translates to: ARCSSARAGTHCPGR*RPASAAPSASGLDC Trigger: ACAGTCCAGCCCGGACGCTGAAGGTGCTGCTGATGCTGGCCTCCATCTGCCTGGGCAATGCGTACCTGCACGGGCTGAGGAACACCTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
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| 3UTR GCA 90 bp | GGAAAGCACCTTCCGTTTAGGCTGTCTGCACCGGTTCCTGTGAGCTaGTGGGCAAGCAGCATCCTCCGGAAGAGCAGCCAGCGACAGGCA | + |
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Preference number: 1 (lower is better) Translates to: GKHLPFRLSAPVPVS*WASSILRKSSQRQA Trigger: TGCCTGTCGCTGGCTGCTCTTCCGGAGGATGCTGCTTGCCCAGCAGCTCACAGGAACCGGTGCAGACAGCCTAAACGGAAGGTGCTTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
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| 3UTR GCA 90 bp | AGGGCTGTCACCGGCTTCATCCGGAGGTTCGGAGCAGGCTCAGAGTaGACTGGGGTGTGGCCGTTCAGCATGCCATTTGCCACATCTGTG | + |
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Preference number: 1 (lower is better) Translates to: RAVTGFIRRFGAGSE*TGVWPFSMPFATSV Trigger: CACAGATGTGGCAAATGGCATGCTGAACGGCCACACCCCAGTGCACTCTGAGCCTGCTCCGAACCTCCGGATGAAGCCGGTGACAGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
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| 3UTR GCA 90 bp | GCCACTCCTACGTGGAAGAGGATTTGCCAGGTGTTCCTCAGCCCGTaGAGGTACGCATTGCCCAGGCAGATGGAGGCCAGCATCAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: ATPTWKRICQVFLSP*RYALPRQMEASISS Trigger: GCTGCTGATGCTGGCCTCCATCTGCCTGGGCAATGCGTACCTGCACGGGCTGAGGAACACCTGGCAAATCCTCTTCCACGTAGGAGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
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| 3UTR GCA 90 bp | GGTTCGGAGCAGGCTCAGAGTGCACTGGGGTGTGGCCGTTCAGCATaGCATTTGCCACATCTGTGTCCTCTAGGGACAGGACTGCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: GSEQAQSALGCGRSA*HLPHLCPLGTGLLE Trigger: CTCCAGCAGTCCTGTCCCTAGAGGACACAGATGTGGCAAATGGCATGCTGAACGGCCACACCCCAGTGCACTCTGAGCCTGCTCCGAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
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| 3UTR CCA 90 bp | GGCTTCATCCGGAGGTTCGGAGCAGGCTCAGAGTGCACTGGGGTGTaGCCGTTCAGCATGCCATTTGCCACATCTGTGTCCTCTAGGGAC | + |
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Preference number: 1 (lower is better) Translates to: GFIRRFGAGSECTGV*PFSMPFATSVSSRD Trigger: GTCCCTAGAGGACACAGATGTGGCAAATGGCATGCTGAACGGCCACACCCCAGTGCACTCTGAGCCTGCTCCGAACCTCCGGATGAAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
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| 3UTR CCA 90 bp | TGTCACCGGCTTCATCCGGAGGTTCGGAGCAGGCTCAGAGTGCACTaGGGTGTGGCCGTTCAGCATGCCATTTGCCACATCTGTGTCCTC | + |
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Preference number: 1 (lower is better) Translates to: CHRLHPEVRSRLRVH*GVAVQHAICHICVL Trigger: GAGGACACAGATGTGGCAAATGGCATGCTGAACGGCCACACCCCAGTGCACTCTGAGCCTGCTCCGAACCTCCGGATGAAGCCGGTGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
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| 3UTR TCA 90 bp | TTGCTGTTACAGGCGGCTCCCTCGGGAAGCAGCACAGTAAAGGACTaGATGAGAGTGAGGCATGCAGCCCTCCACACACCCAGGGCACCT | + |
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Preference number: 1 (lower is better) Translates to: LLLQAAPSGSSTVKD*MRVRHAALHTPRAP Trigger: AGGTGCCCTGGGTGTGTGGAGGGCTGCATGCCTCACTCTCATTCAGTCCTTTACTGTGCTGCTTCCCGAGGGAGCCGCCTGTAACAGCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
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| 3UTR CCA 90 bp | CCAGGCCTGAGTGGAAGAACCAAGCTGACCTCCAGTCCACTGGGTTaGCTGACCTGTGTGTTCCTTTCCCCCACCTCATCTCTCAAGGGC | + |
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Preference number: 1 (lower is better) Translates to: PGLSGRTKLTSSPLG*LTCVFLSPTSSLKG Trigger: GCCCTTGAGAGATGAGGTGGGGGAAAGGAACACACAGGTCAGCCAACCCAGTGGACTGGAGGTCAGCTTGGTTCTTCCACTCAGGCCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
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| 3UTR CCA 90 bp | TGGGAGGCTTCTGTCTCTCCACAGACTCTAGCCTGCATCTCCATCTaGAGGCAGGAATGTAGGAGGTGGGCGGAAACAGGTAGGGGAGGT | + |
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Preference number: 1 (lower is better) Translates to: WEASVSPQTLACISI*RQECRRWAETGRGG Trigger: ACCTCCCCTACCTGTTTCCGCCCACCTCCTACATTCCTGCCTCCAGATGGAGATGCAGGCTAGAGTCTGTGGAGAGACAGAAGCCTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
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| 3UTR CCA 90 bp | AAAGCGCTGCTTCCCCTGAGTACTGAGCCAAGGTGGGGCAGAGGATaGGATTCCAAAGCTGCCTCCCTCTCCATCACTGATGGGAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: KALLPLSTEPRWGRG*DSKAASLSITDGRL Trigger: AAGCCTCCCATCAGTGATGGAGAGGGAGGCAGCTTTGGAATCCCATCCTCTGCCCCACCTTGGCTCAGTACTCAGGGGAAGCAGCGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
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| 3UTR TCA 90 bp | AAACCCTGGCCTTTCTCTCTCCACTCGGCCCCTCTAAGAGGACCCTaGAGCCCCCGCATCTGCTTGTGCCTATGTGCTTATGATCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: KPWPFSLHSAPLRGP*SPRICLCLCAYDPV Trigger: CACTGGATCATAAGCACATAGGCACAAGCAGATGCGGGGGCTTCAGGGTCCTCTTAGAGGGGCCGAGTGGAGAGAGAAAGGCCAGGGTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
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| 3UTR TCA 90 bp | CTACAAAGCCAGCTTTCTTGGATCCTGAAGCAGGTCTGCTGGTGCTaGCTGTATCAGGGGCTCCTTGCACAGAAACCACGAGGCAGCCCC | + |
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Preference number: 1 (lower is better) Translates to: LQSQLSWILKQVCWC*LYQGLLAQKPRGSP Trigger: GGGGCTGCCTCGTGGTTTCTGTGCAAGGAGCCCCTGATACAGTCAGCACCAGCAGACCTGCTTCAGGATCCAAGAAAGCTGGCTTTGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
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| 3UTR GCA 90 bp | ATGGGGCCTTACGTACTGCAGCCACATGAAATGCCACTGTGTCGATaGTCGAACACTAGTGCAGCCTGCTGCCTGCTGCACACACCCAGA | + |
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Preference number: 1 (lower is better) Translates to: MGPYVLQPHEMPLCR*SNTSAACCLLHTPR Trigger: TCTGGGTGTGTGCAGCAGGCAGCAGGCTGCACTAGTGTTCGAGCATCGACACAGTGGCATTTCATGTGGCTGCAGTACGTAAGGCCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
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| 3UTR CCA 90 bp | TATCTCCCCAGCAATGCAAGAGTGACAGTGCCAGCCAGGTGGTGGTaGCACACCACTTTAATCTCAGCACTTGGGAGGCAGAGGCAGGTG | + |
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Preference number: 1 (lower is better) Translates to: YLPSNARVTVPARWW*HTTLISALGRQRQV Trigger: CACCTGCCTCTGCCTCCCAAGTGCTGAGATTAAAGTGGTGTGCCACCACCACCTGGCTGGCACTGTCACTCTTGCATTGCTGGGGAGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
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| 3UTR CCA 90 bp | GCCATCTATCTCCCCAGCAATGCAAGAGTGACAGTGCCAGCCAGGTaGTGGTGGCACACCACTTTAATCTCAGCACTTGGGAGGCAGAGG | + |
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Preference number: 1 (lower is better) Translates to: AIYLPSNARVTVPAR*WWHTTLISALGRQR Trigger: CCTCTGCCTCCCAAGTGCTGAGATTAAAGTGGTGTGCCACCACCACCTGGCTGGCACTGTCACTCTTGCATTGCTGGGGAGATAGATGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
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| 3UTR TCA 90 bp | GCCCTCAGGTGTGCAGACATTTCCCTAGCCCACTATTCCCAGATGTaGACACCAAGCCCCTGTCCACAGCTGTCCTGCTGCCATCTATCT | + |
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Preference number: 1 (lower is better) Translates to: ALRCADISLAHYSQM*TPSPCPQLSCCHLS Trigger: AGATAGATGGCAGCAGGACAGCTGTGGACAGGGGCTTGGTGTTCACATCTGGGAATAGTGGGCTAGGGAAATGTCTGCACACCTGAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
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| 3UTR GCA 90 bp | CCACATGAAATGCCACTGTGTCGATGCTCGAACACTAGTGCAGCCTaGTGCCTGCTGCACACACCCAGAGGCCTTGTAACCCTTTCTTCC | + |
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Preference number: 1 (lower is better) Translates to: PHEMPLCRCSNTSAA*CLLHTPRGLVTLSS Trigger: GGAAGAAAGGGTTACAAGGCCTCTGGGTGTGTGCAGCAGGCAGCAGGCTGCACTAGTGTTCGAGCATCGACACAGTGGCATTTCATGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
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| 3UTR CCA 90 bp | CCTCCGGAAGAGCAGCCAGCGACAGGCAAAGAAACACGCCTGCCTTaGAACCAGATTGTCCTGGCATCAAGAATCCCACTGGGCTACAAA | + |
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Preference number: 1 (lower is better) Translates to: PPEEQPATGKETRLP*NQIVLASRIPLGYK Trigger: TTTGTAGCCCAGTGGGATTCTTGATGCCAGGACAATCTGGTTCCAAGGCAGGCGTGTTTCTTTGCCTGTCGCTGGCTGCTCTTCCGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
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| 3UTR CCA 90 bp | CAGCCTCAGACACATGTCATCCCTGTCAAACACACAGTAGAGAGCTaGAAGTGTTGCTGTTACAGGCGGCTCCCTCGGGAAGCAGCACAG | + |
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Preference number: 1 (lower is better) Translates to: QPQTHVIPVKHTVES*KCCCYRRLPREAAQ Trigger: CTGTGCTGCTTCCCGAGGGAGCCGCCTGTAACAGCAACACTTCCAGCTCTCTACTGTGTGTTTGACAGGGATGACATGTGTCTGAGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
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| 3UTR CCA 90 bp | ATCTATCTCCCCAGCAATGCAAGAGTGACAGTGCCAGCCAGGTGGTaGTGGCACACCACTTTAATCTCAGCACTTGGGAGGCAGAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: IYLPSNARVTVPARW*WHTTLISALGRQRQ Trigger: CTGCCTCTGCCTCCCAAGTGCTGAGATTAAAGTGGTGTGCCACCACCACCTGGCTGGCACTGTCACTCTTGCATTGCTGGGGAGATAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
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| 3UTR GCA 90 bp | CATGAAATGCCACTGTGTCGATGCTCGAACACTAGTGCAGCCTGCTaGCTGCTGCACACACCCAGAGGCCTTGTAACCCTTTCTTCCTGT | + |
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Preference number: 1 (lower is better) Translates to: HEMPLCRCSNTSAAC*LLHTPRGLVTLSSC Trigger: ACAGGAAGAAAGGGTTACAAGGCCTCTGGGTGTGTGCAGCAGGCAGCAGGCTGCACTAGTGTTCGAGCATCGACACAGTGGCATTTCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
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| 3UTR CCA 90 bp | TCCTCTAGGGACAGGACTGCTGGAGGCTGGAACTCGAGCTCCTCTTaGATCTTTTCTAAGCCACTCTTCATCTGGGAGGAGCTCATGTGG | + |
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Preference number: 1 (lower is better) Translates to: SSRDRTAGGWNSSSS*IFSKPLFIWEELMW Trigger: CCACATGAGCTCCTCCCAGATGAAGAGTGGCTTAGAAAAGATCCAAGAGGAGCTCGAGTTCCAGCCTCCAGCAGTCCTGTCCCTAGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
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| 3UTR TCA 90 bp | GTCAGATGCAAGCAACAGTTTAGCCAAGTGTTTGCTGGACACAGCTaGCAGTACCCCTGGCCATGTACAGCCTCAGACACATGTCATCCC | + |
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Preference number: 1 (lower is better) Translates to: VRCKQQFSQVFAGHS*QYPWPCTASDTCHP Trigger: GGGATGACATGTGTCTGAGGCTGTACATGGCCAGGGGTACTGTCAGCTGTGTCCAGCAAACACTTGGCTAAACTGTTGCTTGCATCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
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| 3UTR TCA 90 bp | TTTCCAACTTCCTCTTGGGCAACCTGTAAAGAATGCTCTGCGAGGTaGACTCCACGGATGAGGTTCAGGGCCGCGCACATGATGTTGAGA | + |
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Preference number: 1 (lower is better) Translates to: FPTSSWATCKECSAR*TPRMRFRAAHMMLR Trigger: TCTCAACATCATGTGCGCGGCCCTGAACCTCATCCGTGGAGTTCACCTCGCAGAGCATTCTTTACAGGTTGCCCAAGAGGAAGTTGGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
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| 3UTR CCA 90 bp | GCCCTCATCACACTCCATAGTCAGATTGCCTCTCCTGCAGCTGTCTaGTCAGGATCTGATATGAAGACAGAAAAGCCACTCCTACGTGGA | + |
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Preference number: 1 (lower is better) Translates to: ALITLHSQIASPAAV*SGSDMKTEKPLLRG Trigger: TCCACGTAGGAGTGGCTTTTCTGTCTTCATATCAGATCCTGACCAGACAGCTGCAGGAGAGGCAATCTGACTATGGAGTGTGATGAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
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| 3UTR TCA 90 bp | TTCTGCTTTCCTCTTTCCCACTTCAAAATTCTGTGTCAGGAAGAGTaGGCATTTGCCTGTACAGTAGACACGAACGTACGTGAGATCAAC | + |
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Preference number: 1 (lower is better) Translates to: FCFPLSHFKILCQEE*AFACTVDTNVREIN Trigger: GTTGATCTCACGTACGTTCGTGTCTACTGTACAGGCAAATGCTCACTCTTCCTGACACAGAATTTTGAAGTGGGAAAGAGGAAAGCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
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| 3UTR CAA 90 bp | GAGCAGGCTCAGAGTGCACTGGGGTGTGGCCGTTCAGCATGCCATTaGCCACATCTGTGTCCTCTAGGGACAGGACTGCTGGAGGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: EQAQSALGCGRSACH*PHLCPLGTGLLEAG Trigger: TCCAGCCTCCAGCAGTCCTGTCCCTAGAGGACACAGATGTGGCAAATGGCATGCTGAACGGCCACACCCCAGTGCACTCTGAGCCTGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
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| 3UTR CAA 90 bp | CCCAGGCCTGAGTGGAAGAACCAAGCTGACCTCCAGTCCACTGGGTaGGCTGACCTGTGTGTTCCTTTCCCCCACCTCATCTCTCAAGGG | + |
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Preference number: 2 (lower is better) Translates to: PRPEWKNQADLQSTG*ADLCVPFPHLISQG Trigger: CCCTTGAGAGATGAGGTGGGGGAAAGGAACACACAGGTCAGCCAACCCAGTGGACTGGAGGTCAGCTTGGTTCTTCCACTCAGGCCTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
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| 3UTR-3UTR TCA 90 bp | AGGTGCACAGGGCCACATCTCCAGCAATGCTACAGTGGCGAGCACCCAGCTGCCACGATACCGCCACTCTaGCCATCACAGATGCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: RCTGPHLQQCYSGEHPAATIPPL*PSQMLS Trigger: AGAGAGCATCTGTGATGGTCAGAGTGGCGGTATCGT...GGCAGCTGGGTGCTCGCCACTGTAGCATTGCTGGAGATGTGGCCCTGTGCACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
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| 3UTR-3UTR GCA 90 bp | CCGGTGGGGTCTGTGCAGCATCTGGGACTGAGGGGGAAGTCGACCTCAGATGGCCGTGCTCTAATTAGGTaGTCAAGAGAGGTTTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: PVGSVQHLGLRGKSTSDGRALIR*SREVWG Trigger: GCCCCAAACCTCTCTTGAGCACCTAATTAGAGCACG...GCCATCTGAGGTCGACTTCCCCCTCAGTCCCAGATGCTGCACAGACCCCACCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
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| 3UTR-3UTR CCA 90 bp | TACAACAGTCCCCTCTGTGACCACCCACAATCCTCACTAAGGGCACTGAGGAGCCATACAGACCAGGACTaGCAACCAGCAGCCCGGGCC | + |
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Preference number: 2 (lower is better) Translates to: YNSPLCDHPQSSLRALRSHTDQD*QPAARA Trigger: GGCCCGGGCTGCTGGTTGCCAGTCCTGGTCTGTATG...GCTCCTCAGTGCCCTTAGTGAGGATTGTGGGTGGTCACAGAGGGGACTGTTGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
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| 3UTR-3UTR TCA 90 bp | GAGGAGGTGCACAGGGCCACATCTCCAGCAATGCTACAGTGGCGAGCACCCAGCTCTGCTAAGGATCTCTaGAACCCTGGCCTTTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: EEVHRATSPAMLQWRAPSSAKDL*NPGLSL Trigger: GAGAGAAAGGCCAGGGTTTCAGAGATCCTTAGCAGA...GCTGGGTGCTCGCCACTGTAGCATTGCTGGAGATGTGGCCCTGTGCACCTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
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| 3UTR-3UTR TCA 90 bp | CTGGACACAGCTGACAGTACCCCTGGCCATGTACAGCCTCAGACACATGTCATCAAGCGCTGCTTCCCCTaGGTACTGAGCCAAGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: LDTADSTPGHVQPQTHVIKRCFP*VLSQGG Trigger: CCCACCTTGGCTCAGTACTCAGGGGAAGCAGCGCTT...GATGACATGTGTCTGAGGCTGTACATGGCCAGGGGTACTGTCAGCTGTGTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
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| 3UTR-3UTR CCA 90 bp | AGCATCCTCCGGAAGAGCAGCCAGCGACAGGCAAAGAAACACGCCTGCCTTGGAGAGGCTTCTCTAGGCTaGACTCTGTCAGTCGGTGCA | + |
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Preference number: 2 (lower is better) Translates to: SILRKSSQRQAKKHACLGEASLG*TLSVGA Trigger: TGCACCGACTGACAGAGTCCAGCCTAGAGAAGCCTC...TCCAAGGCAGGCGTGTTTCTTTGCCTGTCGCTGGCTGCTCTTCCGGAGGATGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
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| 3UTR-3UTR GCA 90 bp | AAGACAGAAAAGCCACTCCTACGTGGAAGAGGATTTGCCAGGTGTTCCTCAGCCGGAGCAGGCTCAGAGTaGACTGGGGTGTGGCCGTTC | + |
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Preference number: 2 (lower is better) Translates to: KTEKPLLRGRGFARCSSAGAGSE*TGVWPF Trigger: GAACGGCCACACCCCAGTGCACTCTGAGCCTGCTCC...GGCTGAGGAACACCTGGCAAATCCTCTTCCACGTAGGAGTGGCTTTTCTGTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGGTGTTCCTCAGCCCGTGCAGGTACGCATTGCCCAGGCAGATGGAGGCCAGAACTCGAGCTCCTCTTaGATCTTTTCTAAGCCACTC | + |
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Preference number: 2 (lower is better) Translates to: PGVPQPVQVRIAQADGGQNSSSS*IFSKPL Trigger: GAGTGGCTTAGAAAAGATCCAAGAGGAGCTCGAGTT...CTGGCCTCCATCTGCCTGGGCAATGCGTACCTGCACGGGCTGAGGAACACCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTCCAGCAATGCTACAGTGGCGAGCACCCAGCTGCCACAACAAAGGCAGAGAATCACAGATGCTCTCTaGGCAAGCTCCTGCTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: ISSNATVASTQLPQQRQRITDAL*ASSCSS Trigger: GCTGGAGCAGGAGCTTGCTCAGAGAGCATCTGTGAT...TCTCTGCCTTTGTTGTGGCAGCTGGGTGCTCGCCACTGTAGCATTGCTGGAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
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| 3UTR-3UTR CCA 90 bp | TACAACAGTCCCCTCTGTGACCACCCACAATCCTCACTAAGGGCACTGAGGAGCGCTGAGAAGCAGGAGTaGACACAGACTGGCCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: YNSPLCDHPQSSLRALRSAEKQE*TQTGLP Trigger: TGGAAGGCCAGTCTGTGTCCACTCCTGCTTCTCAGC...GCTCCTCAGTGCCCTTAGTGAGGATTGTGGGTGGTCACAGAGGGGACTGTTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
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| 3UTR-3UTR CCA 90 bp | CCGGGCTGGACTGTAGAACAGGTACAGATAACACTGGACGATGCAGGCCACAGAGCTGAGAAGCAGGAGTaGACACAGACTGGCCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: PGWTVEQVQITLDDAGHRAEKQE*TQTGLP Trigger: TGGAAGGCCAGTCTGTGTCCACTCCTGCTTCTCAGC...TCTGTGGCCTGCATCGTCCAGTGTTATCTGTACCTGTTCTACAGTCCAGCCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCTCTCTAGGAGGAGGTGCACAGGGCCACATCTCCAGCAATGCTACAGTGGCGGATCTCTGAAACCCTaGCCTTTCTCTCTCCACTCG | + |
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Preference number: 2 (lower is better) Translates to: SLSRRRCTGPHLQQCYSGGSLKP*PFSLHS Trigger: CGAGTGGAGAGAGAAAGGCCAGGGTTTCAGAGATCC...GCCACTGTAGCATTGCTGGAGATGTGGCCCTGTGCACCTCCTCCTAGAGAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
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| 3UTR-3UTR CCA 90 bp | AGACAGAAAAGCCACTCCTACGTGGAAGAGGATTTGCCAGGTGTTCCTCAGCCCAGGACTGCTGGAGGCTaGAACTCGAGCTCCTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: RQKSHSYVEEDLPGVPQPRTAGG*NSSSSW Trigger: CCAAGAGGAGCTCGAGTTCCAGCCTCCAGCAGTCCT...GGGCTGAGGAACACCTGGCAAATCCTCTTCCACGTAGGAGTGGCTTTTCTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCAGGCTCAGAGTGCACTGGGGTGTGGCCGTTCAGCATGCCATTTGCCACATAAGCCACTCTTCATCTaGGAGGAGCTCATGTGGTTA | + |
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Preference number: 2 (lower is better) Translates to: EQAQSALGCGRSACHLPHKPLFI*EELMWL Trigger: TAACCACATGAGCTCCTCCCAGATGAAGAGTGGCTT...ATGTGGCAAATGGCATGCTGAACGGCCACACCCCAGTGCACTCTGAGCCTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
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| 3UTR CAA 90 bp | GACACATGTCATCCCTGTCAAACACACAGTAGAGAGCTGGAAGTGTaGCTGTTACAGGCGGCTCCCTCGGGAAGCAGCACAGTAAAGGAC | + |
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Preference number: 2 (lower is better) Translates to: DTCHPCQTHSRELEV*LLQAAPSGSSTVKD Trigger: GTCCTTTACTGTGCTGCTTCCCGAGGGAGCCGCCTGTAACAGCAACACTTCCAGCTCTCTACTGTGTGTTTGACAGGGATGACATGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
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| 3UTR CAA 90 bp | ACCTGGGAGAGACAGTCAGATGCAAGCAACAGTTTAGCCAAGTGTTaGCTGGACACAGCTGACAGTACCCCTGGCCATGTACAGCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: TWERQSDASNSLAKC*LDTADSTPGHVQPQ Trigger: CTGAGGCTGTACATGGCCAGGGGTACTGTCAGCTGTGTCCAGCAAACACTTGGCTAAACTGTTGCTTGCATCTGACTGTCTCTCCCAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
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| 3UTR-3UTR TCA 90 bp | CTGGACACAGCTGACAGTACCCCTGGCCATGTACAGCCTCAGACACATGTCATCTCTGCTAAGGATCTCTaGAACCCTGGCCTTTCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: LDTADSTPGHVQPQTHVISAKDL*NPGLSL Trigger: GAGAGAAAGGCCAGGGTTTCAGAGATCCTTAGCAGA...GATGACATGTGTCTGAGGCTGTACATGGCCAGGGGTACTGTCAGCTGTGTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR-3UTR GCA 90 bp | AAGCTGACCTCCAGTCCACTGGGTTGGCTGACCTGTGTGTTCCTTTCCCCCACCGGAAGAGTGAGCATTTaGCTGTACAGTAGACACGAA | + |
|
Preference number: 2 (lower is better) Translates to: KLTSSPLGWLTCVFLSPTGRVSI*LYSRHE Trigger: TTCGTGTCTACTGTACAGGCAAATGCTCACTCTTCC...GGTGGGGGAAAGGAACACACAGGTCAGCCAACCCAGTGGACTGGAGGTCAGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR-3UTR TCA 90 bp | CTACAGAGCAAGTTTCAGGACAGCCAAGGCTGGAGAAACCCTGTATTGAAAAACGACCCCAAGCAGTGCTaGCGACCAAAGCGCTGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: LQSKFQDSQGWRNPVLKNDPKQC*RPKRCF Trigger: GAAGCAGCGCTTTGGTCGTCAGCACTGCTTGGGGTC...GTTTTTCAATACAGGGTTTCTCCAGCCTTGGCTGTCCTGAAACTTGCTCTGTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR-3UTR GCA 90 bp | AGACAGAAAAGCCACTCCTACGTGGAAGAGGATTTGCCAGGTGTTCCTCAGCCCTGTGGCCGTTCAGCATaGCATTTGCCACATCTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: RQKSHSYVEEDLPGVPQPCGRSA*HLPHLC Trigger: ACACAGATGTGGCAAATGGCATGCTGAACGGCCACA...GGGCTGAGGAACACCTGGCAAATCCTCTTCCACGTAGGAGTGGCTTTTCTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTCAAAATTCTGTGTCAGGAAGAGTGAGCATTTGCCTGTACAGTAGACACGAACATACAGACCAGGACTaGCAACCAGCAGCCCGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: LQNSVSGRVSICLYSRHEHTDQD*QPAARA Trigger: GGCCCGGGCTGCTGGTTGCCAGTCCTGGTCTGTATG...TTCGTGTCTACTGTACAGGCAAATGCTCACTCTTCCTGACACAGAATTTTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| 3UTR-3UTR CCA 90 bp | ATCCCTGTCAAACACACAGTAGAGAGCTGGAAGTGTTGCTGTTACAGGCGGCTCGGAACCAGATTGTCCTaGCATCAAGAATCCCACTGG | + |
|
Preference number: 2 (lower is better) Translates to: IPVKHTVESWKCCCYRRLGTRLS*HQESHW Trigger: CCAGTGGGATTCTTGATGCCAGGACAATCTGGTTCC...GAGCCGCCTGTAACAGCAACACTTCCAGCTCTCTACTGTGTGTTTGACAGGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR-3UTR TCA 90 bp | CTACAGAGCAAGTTTCAGGACAGCCAAGGCTGGAGAAACCCTGTATTGAAAAACATCACAGATGCTCTCTaGGCAAGCTCCTGCTCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: LQSKFQDSQGWRNPVLKNITDAL*ASSCSS Trigger: GCTGGAGCAGGAGCTTGCTCAGAGAGCATCTGTGAT...GTTTTTCAATACAGGGTTTCTCCAGCCTTGGCTGTCCTGAAACTTGCTCTGTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR-3UTR CCA 90 bp | CTTCTGCTTTCCTCTTTCCCACTTCAAAATTCTGTGTCAGGAAGAGTGAGCATTCCAGCAATGCTACAGTaGCGAGCACCCAGCTGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: LLLSSFPLQNSVSGRVSIPAMLQ*RAPSCH Trigger: GTGGCAGCTGGGTGCTCGCCACTGTAGCATTGCTGG...AATGCTCACTCTTCCTGACACAGAATTTTGAAGTGGGAAAGAGGAAAGCAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| 3UTR-3UTR CCA 90 bp | TCAACCCATGAAATTTTGGGTATATTCCAAGAACAAGCTAGAGGGGTGAACCCCGCTGAGAAGCAGGAGTaGACACAGACTGGCCTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: STHEILGIFQEQARGVNPAEKQE*TQTGLP Trigger: TGGAAGGCCAGTCTGTGTCCACTCCTGCTTCTCAGC...GGGGTTCACCCCTCTAGCTTGTTCTTGGAATATACCCAAAATTTCATGGGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| 3UTR-3UTR GCA 90 bp | CAGAGAAGTGCCAGTTACACAAAGCTTTTGAGTGTTAACACCTACTTAATACCTCTCTCTAGGAGGAGGTaGACAGGGCCACATCTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: QRSASYTKLLSVNTYLIPLSRRR*TGPHLQ Trigger: CTGGAGATGTGGCCCTGTGCACCTCCTCCTAGAGAG...AGGTATTAAGTAGGTGTTAACACTCAAAAGCTTTGTGTAACTGGCACTTCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| 3UTR-3UTR TCA 90 bp | CCTGCTGCACACACCCAGAGGCCTTGTAACCCTTTCTTCCTGTACATGTACAACGTGCTTATGATCCAGTaGTACTGGTTATTAATCCAT | + |
|
Preference number: 2 (lower is better) Translates to: PAAHTQRPCNPFFLYMYNVLMIQ*YWLLIH Trigger: ATGGATTAATAACCAGTATCACTGGATCATAAGCAC...GTTGTACATGTACAGGAAGAAAGGGTTACAAGGCCTCTGGGTGTGTGCAGCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR-3UTR GCA 90 bp | ATCCCTGTCAAACACACAGTAGAGAGCTGGAAGTGTTGCTGTTACAGGCGGCTCAGCTTTACAGAGAAGTaGCAGTTACACAAAGCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: IPVKHTVESWKCCCYRRLSFTEK*QLHKAF Trigger: AAAAGCTTTGTGTAACTGGCACTTCTCTGTAAAGCT...GAGCCGCCTGTAACAGCAACACTTCCAGCTCTCTACTGTGTGTTTGACAGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR-3UTR CCA 90 bp | TGTTTCCAACTTCCTCTTGGGCAACCTGTAAAGAATGCTCTGCGAGGTGAACTCTGGGAGGAGCTCATGTaGTTAAAATGCCACTTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: CFQLPLGQPVKNALRGELWEELM*LKCHFV Trigger: AACAAAGTGGCATTTTAACCACATGAGCTCCTCCCA...GAGTTCACCTCGCAGAGCATTCTTTACAGGTTGCCCAAGAGGAAGTTGGAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTCAAAATTCTGTGTCAGGAAGAGTGAGCATTTGCCTGTACAGTAGACACGAATCCTCACAGACACCCTaGCAGTTACTAAGTCTACCA | + |
|
Preference number: 2 (lower is better) Translates to: LQNSVSGRVSICLYSRHESSQTP*QLLSLP Trigger: TGGTAGACTTAGTAACTGGCAGGGTGTCTGTGAGGA...TTCGTGTCTACTGTACAGGCAAATGCTCACTCTTCCTGACACAGAATTTTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| 3UTR-3UTR GCA 90 bp | CAGAGAAGTGCCAGTTACACAAAGCTTTTGAGTGTTAACACCTACTTAATACCTTCCTCACAGACACCCTaGCAGTTACTAAGTCTACCA | + |
|
Preference number: 2 (lower is better) Translates to: QRSASYTKLLSVNTYLIPSSQTP*QLLSLP Trigger: TGGTAGACTTAGTAACTGGCAGGGTGTCTGTGAGGA...AGGTATTAAGTAGGTGTTAACACTCAAAAGCTTTGTGTAACTGGCACTTCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| 3UTR-3UTR TCA 90 bp | CAGAGAAGTGCCAGTTACACAAAGCTTTTGAGTGTTAACACCTACTTAATACCTGTGCTTATGATCCAGTaGTACTGGTTATTAATCCAT | + |
|
Preference number: 2 (lower is better) Translates to: QRSASYTKLLSVNTYLIPVLMIQ*YWLLIH Trigger: ATGGATTAATAACCAGTATCACTGGATCATAAGCAC...AGGTATTAAGTAGGTGTTAACACTCAAAAGCTTTGTGTAACTGGCACTTCTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| 3UTR CCA 72 bp | CACCCACCGTACCTGAAGCCCCAGGGTGTCTGTCTCTaGGGCGTCTGTCTTCCCTGCCCTCCTCCAGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: HPPYLKPQGVCL*GVCLPCPPPGR Trigger: CCTCCCTGGAGGAGGGCAGGGAAGACAGACGCCCCAGAGACAGACACCCTGGGGCTTCAGGTACGGTGGGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR TCA 72 bp | GCAGCCCGGGCCCTCCGATGCACCTGCCAGAATCTGTaGCCTTGGGAGCGTCAAGGATGGAGGGTTGAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: AARALRCTCQNL*PWERQGWRVEV Trigger: CACCTCAACCCTCCATCCTTGACGCTCCCAAGGTCACAGATTCTGGCAGGTGCATCGGAGGGCCCGGGCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| 3UTR TCA 72 bp | TGGGGCGTCTGTCTTCCCTGCCCTCCTCCAGGGAGGTaGGGCTTCTCTAGGCTGGACTCTGTCAGTCGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: WGVCLPCPPPGR*GFSRLDSVSRC Trigger: GCACCGACTGACAGAGTCCAGCCTAGAGAAGCCTCACCTCCCTGGAGGAGGGCAGGGAAGACAGACGCCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR GCA 72 bp | ACCGGCTTCATCCGGAGGTTCGGAGCAGGCTCAGAGTaGACTGGGGTGTGGCCGTTCAGCATGCCATTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: TGFIRRFGAGSE*TGVWPFSMPFA Trigger: GGCAAATGGCATGCTGAACGGCCACACCCCAGTGCACTCTGAGCCTGCTCCGAACCTCCGGATGAAGCCGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
||
| 3UTR TCA 72 bp | CAGGCGGCTCCCTCGGGAAGCAGCACAGTAAAGGACTaGATGAGAGTGAGGCATGCAGCCCTCCACACACCC | + |
|
Preference number: 3 (lower is better) Translates to: QAAPSGSSTVKD*MRVRHAALHTP Trigger: GGGTGTGTGGAGGGCTGCATGCCTCACTCTCATTCAGTCCTTTACTGTGCTGCTTCCCGAGGGAGCCGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR GCA 72 bp | CTTCCGTTTAGGCTGTCTGCACCGGTTCCTGTGAGCTaGTGGGCAAGCAGCATCCTCCGGAAGAGCAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LPFRLSAPVPVS*WASSILRKSSQ Trigger: CTGGCTGCTCTTCCGGAGGATGCTGCTTGCCCAGCAGCTCACAGGAACCGGTGCAGACAGCCTAAACGGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR GCA 72 bp | CACCTCAGGCCAACTCCTATGCTCCAGATAGCCACCTaGTTCGGCCTGCTGGCTATGGCCCTTGACCCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: HLRPTPMLQIAT*FGLLAMALDPK Trigger: CTTGGGGTCAAGGGCCATAGCCAGCAGGCCGAAGCAGGTGGCTATCTGGAGCATAGGAGTTGGCCTGAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR GCA 72 bp | TTTGCCAGGTGTTCCTCAGCCCGTGCAGGTACGCATTaGCCAGGCAGATGGAGGCCAGCATCAGCAGCACCT | + |
|
Preference number: 3 (lower is better) Translates to: FARCSSARAGTH*PGRWRPASAAP Trigger: AGGTGCTGCTGATGCTGGCCTCCATCTGCCTGGGCAATGCGTACCTGCACGGGCTGAGGAACACCTGGCAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
||
| 3UTR GCA 72 bp | ACGTGGAAGAGGATTTGCCAGGTGTTCCTCAGCCCGTaGAGGTACGCATTGCCCAGGCAGATGGAGGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: TWKRICQVFLSP*RYALPRQMEAS Trigger: GCTGGCCTCCATCTGCCTGGGCAATGCGTACCTGCACGGGCTGAGGAACACCTGGCAAATCCTCTTCCACGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
||
| 3UTR CCA 72 bp | CCTGCCCTCCTCCAGGGAGGTGAGGCTTCTCTAGGCTaGACTCTGTCAGTCGGTGCATCGTTTCCCTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PALLQGGEASLG*TLSVGASFPFR Trigger: CCTGAAGGGAAACGATGCACCGACTGACAGAGTCCAGCCTAGAGAAGCCTCACCTCCCTGGAGGAGGGCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR CCA 72 bp | CGGAGGTTCGGAGCAGGCTCAGAGTGCACTGGGGTGTaGCCGTTCAGCATGCCATTTGCCACATCTGTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: RRFGAGSECTGV*PFSMPFATSVS Trigger: GGACACAGATGTGGCAAATGGCATGCTGAACGGCCACACCCCAGTGCACTCTGAGCCTGCTCCGAACCTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
||
| 3UTR TCA 72 bp | CACGATACCGCCACTCTGACCATCACAGATGCTCTCTaGGCAAGCTCCTGCTCCAGCCGCCCTGTCCTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: HDTATLTITDAL*ASSCSSRPVLA Trigger: AGCTAGGACAGGGCGGCTGGAGCAGGAGCTTGCTCAGAGAGCATCTGTGATGGTCAGAGTGGCGGTATCGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| 3UTR GCA 72 bp | CCACAGCTGTCCTGCTGCCATCTATCTCCCCAGCAATaGAAGAGTGACAGTGCCAGCCAGGTGGTGGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: PQLSCCHLSPQQ*KSDSASQVVVA Trigger: TGCCACCACCACCTGGCTGGCACTGTCACTCTTGCATTGCTGGGGAGATAGATGGCAGCAGGACAGCTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR CCA 72 bp | CTGCCTAAGCCCGCTCACCGGCTAACAGCAGACAGGTaGCACCGAACAGGAAAGCACCTTCCGTTTAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LPKPAHRLTADR*HRTGKHLPFRL Trigger: CAGCCTAAACGGAAGGTGCTTTCCTGTTCGGTGCCACCTGTCTGCTGTTAGCCGGTGAGCGGGCTTAGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR CCA 72 bp | CTTCATCCGGAGGTTCGGAGCAGGCTCAGAGTGCACTaGGGTGTGGCCGTTCAGCATGCCATTTGCCACATC | + |
|
Preference number: 3 (lower is better) Translates to: LHPEVRSRLRVH*GVAVQHAICHI Trigger: GATGTGGCAAATGGCATGCTGAACGGCCACACCCCAGTGCACTCTGAGCCTGCTCCGAACCTCCGGATGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGCTGTCACCGGCTTCATCCGGAGGTTCGGAGCAGGCTCAGAGTGCACTGGCGTTCAGCATGCCATTaGCCACATCTGTGTCCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: QGCHRLHPEVRSRLRVHWRSACH*PHLCPL Trigger: TAGAGGACACAGATGTGGCAAATGGCATGCTGAACG...CCAGTGCACTCTGAGCCTGCTCCGAACCTCCGGATGAAGCCGGTGACAGCCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
||
| 3UTR-3UTR CAA 90 bp | ACGTGGAAGAGGATTTGCCAGGTGTTCCTCAGCCCGTGCAGGTACGCATTGCCCGCCGCGCACATGATGTaGAGAACAAGGGAGAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: TWKRICQVFLSPCRYALPAAHMM*RTRERT Trigger: TGTCCTCTCCCTTGTTCTCAACATCATGTGCGCGGC...GGGCAATGCGTACCTGCACGGGCTGAGGAACACCTGGCAAATCCTCTTCCACGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
||
| 3UTR TCA 72 bp | AGTGCTGACGACCAAAGCGCTGCTTCCCCTGAGTACTaGGCCAAGGTGGGGCAGAGGATGGGATTCCAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SADDQSAASPEY*AKVGQRMGFQS Trigger: GCTTTGGAATCCCATCCTCTGCCCCACCTTGGCTCAGTACTCAGGGGAAGCAGCGCTTTGGTCGTCAGCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR TCA 72 bp | GCTCCTTGCACAGAAACCACGAGGCAGCCCCGGGAATaGAAGGGGCCGTTTCCTTTCTGGGATGAAGGCATG | + |
|
Preference number: 3 (lower is better) Translates to: APCTETTRQPRE*KGPFPFWDEGM Trigger: CATGCCTTCATCCCAGAAAGGAAACGGCCCCTTTCATTCCCGGGGCTGCCTCGTGGTTTCTGTGCAAGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR GCA 72 bp | TCTAGGAGGAGGTGCACAGGGCCACATCTCCAGCAATaGTACAGTGGCGAGCACCCAGCTGCCACAACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SRRRCTGPHLQQ*YSGEHPAATTK Trigger: CTTTGTTGTGGCAGCTGGGTGCTCGCCACTGTAGCATTGCTGGAGATGTGGCCCTGTGCACCTCCTCCTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| 3UTR GCA 72 bp | CCACTGTGTCGATGCTCGAACACTAGTGCAGCCTGCTaGCTGCTGCACACACCCAGAGGCCTTGTAACCCTT | + |
|
Preference number: 3 (lower is better) Translates to: PLCRCSNTSAAC*LLHTPRGLVTL Trigger: AAGGGTTACAAGGCCTCTGGGTGTGTGCAGCAGGCAGCAGGCTGCACTAGTGTTCGAGCATCGACACAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR GCA 72 bp | ATGCCACTGTGTCGATGCTCGAACACTAGTGCAGCCTaGTGCCTGCTGCACACACCCAGAGGCCTTGTAACC | + |
|
Preference number: 3 (lower is better) Translates to: MPLCRCSNTSAA*CLLHTPRGLVT Trigger: GGTTACAAGGCCTCTGGGTGTGTGCAGCAGGCAGCAGGCTGCACTAGTGTTCGAGCATCGACACAGTGGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR CCA 72 bp | GAGGTGCACAGGGCCACATCTCCAGCAATGCTACAGTaGCGAGCACCCAGCTGCCACAACAAAGGCAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: EVHRATSPAMLQ*RAPSCHNKGRE Trigger: TTCTCTGCCTTTGTTGTGGCAGCTGGGTGCTCGCCACTGTAGCATTGCTGGAGATGTGGCCCTGTGCACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| 3UTR TCA 72 bp | AGAACAGCAGCCTCCCCCATTTCTGCTAAGGATCTCTaGAACCCTGGCCTTTCTCTCTCCACTCGGCCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RTAASPISAKDL*NPGLSLSTRPL Trigger: GAGGGGCCGAGTGGAGAGAGAAAGGCCAGGGTTTCAGAGATCCTTAGCAGAAATGGGGGAGGCTGCTGTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| 3UTR TCA 72 bp | TCCTCTTGGGCAACCTGTAAAGAATGCTCTGCGAGGTaGACTCCACGGATGAGGTTCAGGGCCGCGCACATG | + |
|
Preference number: 3 (lower is better) Translates to: SSWATCKECSAR*TPRMRFRAAHM Trigger: CATGTGCGCGGCCCTGAACCTCATCCGTGGAGTTCACCTCGCAGAGCATTCTTTACAGGTTGCCCAAGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
||
| 3UTR GCA 72 bp | AAGCAGCACAGTAAAGGACTGAATGAGAGTGAGGCATaGAGCCCTCCACACACCCAGGGCACCTACAGACGG | + |
|
Preference number: 3 (lower is better) Translates to: KQHSKGLNESEA*SPPHTQGTYRR Trigger: CCGTCTGTAGGTGCCCTGGGTGTGTGGAGGGCTGCATGCCTCACTCTCATTCAGTCCTTTACTGTGCTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR CCA 72 bp | CCCAGCAATGCAAGAGTGACAGTGCCAGCCAGGTGGTaGTGGCACACCACTTTAATCTCAGCACTTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: PSNARVTVPARW*WHTTLISALGR Trigger: CCTCCCAAGTGCTGAGATTAAAGTGGTGTGCCACCACCACCTGGCTGGCACTGTCACTCTTGCATTGCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR-3UTR CAA 90 bp | TACAACAGTCCCCTCTGTGACCACCCACAATCCTCACTAAGGGCACTGAGGAGCCCAGAATCTGTGACCTaGGGAGCGTCAAGGATGGAG | + |
|
Preference number: 3 (lower is better) Translates to: YNSPLCDHPQSSLRALRSPESVT*GASRME Trigger: CTCCATCCTTGACGCTCCCAAGGTCACAGATTCTGG...GCTCCTCAGTGCCCTTAGTGAGGATTGTGGGTGGTCACAGAGGGGACTGTTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR TCA 72 bp | AGGATGGGATTCCAAAGCTGCCTCCCTCTCCATCACTaGTGGGAGGCTTCTGTCTCTCCACAGACTCTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: RMGFQSCLPLHH*WEASVSPQTLA Trigger: GGCTAGAGTCTGTGGAGAGACAGAAGCCTCCCATCAGTGATGGAGAGGGAGGCAGCTTTGGAATCCCATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR TCA 72 bp | TGTGCAGACATTTCCCTAGCCCACTATTCCCAGATGTaGACACCAAGCCCCTGTCCACAGCTGTCCTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: CADISLAHYSQM*TPSPCPQLSCC Trigger: GCAGCAGGACAGCTGTGGACAGGGGCTTGGTGTTCACATCTGGGAATAGTGGGCTAGGGAAATGTCTGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR GCA 72 bp | CGGAAGAGCAGCCAGCGACAGGCAAAGAAACACGCCTaGCTTGGAACCAGATTGTCCTGGCATCAAGAATCC | + |
|
Preference number: 3 (lower is better) Translates to: RKSSQRQAKKHA*LGTRLSWHQES Trigger: GGATTCTTGATGCCAGGACAATCTGGTTCCAAGGCAGGCGTGTTTCTTTGCCTGTCGCTGGCTGCTCTTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR GCA 72 bp | ATCCCTGTCAAACACACAGTAGAGAGCTGGAAGTGTTaGTGTTACAGGCGGCTCCCTCGGGAAGCAGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: IPVKHTVESWKC*CYRRLPREAAQ Trigger: CTGTGCTGCTTCCCGAGGGAGCCGCCTGTAACAGCAACACTTCCAGCTCTCTACTGTGTGTTTGACAGGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR GCA 72 bp | TACGTACTGCAGCCACATGAAATGCCACTGTGTCGATaGTCGAACACTAGTGCAGCCTGCTGCCTGCTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: YVLQPHEMPLCR*SNTSAACCLLH Trigger: GTGCAGCAGGCAGCAGGCTGCACTAGTGTTCGAGCATCGACACAGTGGCATTTCATGTGGCTGCAGTACGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR CCA 72 bp | GAGCAGCCAGCGACAGGCAAAGAAACACGCCTGCCTTaGAACCAGATTGTCCTGGCATCAAGAATCCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: EQPATGKETRLP*NQIVLASRIPL Trigger: CAGTGGGATTCTTGATGCCAGGACAATCTGGTTCCAAGGCAGGCGTGTTTCTTTGCCTGTCGCTGGCTGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR CCA 72 bp | TCTGTCTCTCCACAGACTCTAGCCTGCATCTCCATCTaGAGGCAGGAATGTAGGAGGTGGGCGGAAACAGGT | + |
|
Preference number: 3 (lower is better) Translates to: SVSPQTLACISI*RQECRRWAETG Trigger: ACCTGTTTCCGCCCACCTCCTACATTCCTGCCTCCAGATGGAGATGCAGGCTAGAGTCTGTGGAGAGACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR CCA 72 bp | AGTGGAAGAACCAAGCTGACCTCCAGTCCACTGGGTTaGCTGACCTGTGTGTTCCTTTCCCCCACCTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: SGRTKLTSSPLG*LTCVFLSPTSS Trigger: AGATGAGGTGGGGGAAAGGAACACACAGGTCAGCCAACCCAGTGGACTGGAGGTCAGCTTGGTTCTTCCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR CCA 72 bp | AGCAATGCAAGAGTGACAGTGCCAGCCAGGTGGTGGTaGCACACCACTTTAATCTCAGCACTTGGGAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SNARVTVPARWW*HTTLISALGRQ Trigger: CTGCCTCCCAAGTGCTGAGATTAAAGTGGTGTGCCACCACCACCTGGCTGGCACTGTCACTCTTGCATTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR TCA 72 bp | CAGCTTTCTTGGATCCTGAAGCAGGTCTGCTGGTGCTaGCTGTATCAGGGGCTCCTTGCACAGAAACCACGA | + |
|
Preference number: 3 (lower is better) Translates to: QLSWILKQVCWC*LYQGLLAQKPR Trigger: TCGTGGTTTCTGTGCAAGGAGCCCCTGATACAGTCAGCACCAGCAGACCTGCTTCAGGATCCAAGAAAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR GCA 72 bp | GAAGACAGAAAAGCCACTCCTACGTGGAAGAGGATTTaGCAGGTGTTCCTCAGCCCGTGCAGGTACGCATTG | + |
|
Preference number: 3 (lower is better) Translates to: EDRKATPTWKRI*QVFLSPCRYAL Trigger: CAATGCGTACCTGCACGGGCTGAGGAACACCTGGCAAATCCTCTTCCACGTAGGAGTGGCTTTTCTGTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
||
| 3UTR CCA 72 bp | TGTTCCTTTCCCCCACCTCATCTCTCAAGGGCACCCTaGTTTCTCTTTCTCCACCATTCTGGGCTCTTACGG | + |
|
Preference number: 3 (lower is better) Translates to: CSFPPPHLSRAP*FLFLHHSGLLR Trigger: CCGTAAGAGCCCAGAATGGTGGAGAAAGAGAAACCAGGGTGCCCTTGAGAGATGAGGTGGGGGAAAGGAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR TCA 72 bp | GAACAAGCTAGAGGGGTGAACCCCAACATGGTTTCTTaGGTACCACCAGATACCCACACTGGAGATACGGGG | + |
|
Preference number: 3 (lower is better) Translates to: EQARGVNPNMVS*VPPDTHTGDTG Trigger: CCCCGTATCTCCAGTGTGGGTATCTGGTGGTACTCAAGAAACCATGTTGGGGTTCACCCCTCTAGCTTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| 3UTR TCA 72 bp | CCCTTTCTTCCTGTACATGTACAACAGTCCCCTCTGTaGCCACCCACAATCCTCACTAAGGGCACTGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: PFLPVHVQQSPL*PPTILTKGTEE Trigger: CTCCTCAGTGCCCTTAGTGAGGATTGTGGGTGGTCACAGAGGGGACTGTTGTACATGTACAGGAAGAAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR GCA 72 bp | TTCCTTTCTGGGATGAAGGCATGGGGCCTTACGTACTaGAGCCACATGAAATGCCACTGTGTCGATGCTCGA | + |
|
Preference number: 3 (lower is better) Translates to: FLSGMKAWGLTY*SHMKCHCVDAR Trigger: TCGAGCATCGACACAGTGGCATTTCATGTGGCTGCAGTACGTAAGGCCCCATGCCTTCATCCCAGAAAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR CCA 72 bp | ACACATGTCATCCCTGTCAAACACACAGTAGAGAGCTaGAAGTGTTGCTGTTACAGGCGGCTCCCTCGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: THVIPVKHTVES*KCCCYRRLPRE Trigger: TTCCCGAGGGAGCCGCCTGTAACAGCAACACTTCCAGCTCTCTACTGTGTGTTTGACAGGGATGACATGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR CCA 72 bp | AATGAAAGGGGCCGTTTCCTTTCTGGGATGAAGGCATaGGGCCTTACGTACTGCAGCCACATGAAATGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: NERGRFLSGMKA*GLTYCSHMKCH Trigger: GTGGCATTTCATGTGGCTGCAGTACGTAAGGCCCCATGCCTTCATCCCAGAAAGGAAACGGCCCCTTTCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR CCA 72 bp | ACATCTGTGTCCTCTAGGGACAGGACTGCTGGAGGCTaGAACTCGAGCTCCTCTTGGATCTTTTCTAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: TSVSSRDRTAGG*NSSSSWIFSKP Trigger: TGGCTTAGAAAAGATCCAAGAGGAGCTCGAGTTCCAGCCTCCAGCAGTCCTGTCCCTAGAGGACACAGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
||
| 3UTR-3UTR CAA 90 bp | CTACAGAGCAAGTTTCAGGACAGCCAAGGCTGGAGAAACCCTGTATTGAAAAACTGCTGGCTATGGCCCTaGACCCCAAGCAGTGCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: LQSKFQDSQGWRNPVLKNCWLWP*TPSSAD Trigger: GTCAGCACTGCTTGGGGTCAAGGGCCATAGCCAGCA...GTTTTTCAATACAGGGTTTCTCCAGCCTTGGCTGTCCTGAAACTTGCTCTGTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR TCA 72 bp | AAGCAACAGTTTAGCCAAGTGTTTGCTGGACACAGCTaGCAGTACCCCTGGCCATGTACAGCCTCAGACACA | + |
|
Preference number: 3 (lower is better) Translates to: KQQFSQVFAGHS*QYPWPCTASDT Trigger: TGTGTCTGAGGCTGTACATGGCCAGGGGTACTGTCAGCTGTGTCCAGCAAACACTTGGCTAAACTGTTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR TCA 72 bp | TTGCCTCTCCTGCAGCTGTCTGGTCAGGATCTGATATaGAGACAGAAAAGCCACTCCTACGTGGAAGAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: LPLLQLSGQDLI*RQKSHSYVEED Trigger: ATCCTCTTCCACGTAGGAGTGGCTTTTCTGTCTTCATATCAGATCCTGACCAGACAGCTGCAGGAGAGGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCAAAATTCTGTGTCAGGAAGAGTGAGCATTTGCCTGTACAGTAGACACGAACCAGAATCTGTGACCTaGGGAGCGTCAAGGATGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LQNSVSGRVSICLYSRHEPESVT*GASRME Trigger: CTCCATCCTTGACGCTCCCAAGGTCACAGATTCTGG...TTCGTGTCTACTGTACAGGCAAATGCTCACTCTTCCTGACACAGAATTTTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| 3UTR CCA 72 bp | GCCCATCGTGGACTCACAATAGATCTTTGTTGTCAATaGAAAAGTAGCTCGTCACATGGGCAGCACATACTG | + |
|
Preference number: 3 (lower is better) Translates to: AHRGLTIDLCCQ*KSSSSHGQHIL Trigger: CAGTATGTGCTGCCCATGTGACGAGCTACTTTTCCATTGACAACAAAGATCTATTGTGAGTCCACGATGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR TCA 72 bp | CCCGCATCTGCTTGTGCCTATGTGCTTATGATCCAGTaGTACTGGTTATTAATCCATACGTACATAATTCAG | + |
|
Preference number: 3 (lower is better) Translates to: PASACAYVLMIQ*YWLLIHTYIIQ Trigger: CTGAATTATGTACGTATGGATTAATAACCAGTATCACTGGATCATAAGCACATAGGCACAAGCAGATGCGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR CCA 90 bp | AGGTGCACAGGGCCACATCTCCAGCAATGCTACAGTGGCGAGCACCCAGCTGCCAGAAGCAGAAGGCCATaGCTGCCGGGCACTGGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: RCTGPHLQQCYSGEHPAARSRRP*LPGTGA Trigger: CGCGCCAGTGCCCGGCAGCCATGGCCTTCTGCTTCT...GGCAGCTGGGTGCTCGCCACTGTAGCATTGCTGGAGATGTGGCCCTGTGCACCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR GCA 90 bp | AGGTGCACAGGGCCACATCTCCAGCAATGCTACAGTGGCGAGCACCCAGCTGCCGGAGCAGGCTCAGAGTaGACTGGGGTGTGGCCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RCTGPHLQQCYSGEHPAAGAGSE*TGVWPF Trigger: GAACGGCCACACCCCAGTGCACTCTGAGCCTGCTCC...GGCAGCTGGGTGCTCGCCACTGTAGCATTGCTGGAGATGTGGCCCTGTGCACCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR CCA 90 bp | GACCATCACAGATGCTCTCTGAGCAAGCTCCTGCTCCAGCCGCCCTGTCCTAGCATGGCTGCCGGGCACTaGCGCGAGCAGATGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: DHHRCSLSKLLLQPPCPSMAAGH*REQMAM Trigger: CATGGCCATCTGCTCGCGCCAGTGCCCGGCAGCCAT...GCTAGGACAGGGCGGCTGGAGCAGGAGCTTGCTCAGAGAGCATCTGTGATGGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR TCA 90 bp | GCTGTCACCGGCTTCATCCGGAGGTTCGGAGCAGGCTCAGAGTGCACTGGGGTGAAAGTCAGTGGAGGCTaGGAGGGGCAGTCCATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: AVTGFIRRFGAGSECTGVKVSGG*EGQSIP Trigger: AGGGATGGACTGCCCCTCTCAGCCTCCACTGACTTT...CACCCCAGTGCACTCTGAGCCTGCTCCGAACCTCCGGATGAAGCCGGTGACAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
||
| CDS-3UTR GCA 90 bp | GTCTGCACCGGTTCCTGTGAGCTGCTGGGCAAGCAGCATCCTCCGGAAGAGCAGGTGTTCCTCAGCCCGTaGAGGTACGCATTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VCTGSCELLGKQHPPEEQVFLSP*RYALPR Trigger: CCTGGGCAATGCGTACCTGCACGGGCTGAGGAACAC...CTGCTCTTCCGGAGGATGCTGCTTGCCCAGCAGCTCACAGGAACCGGTGCAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| CDS-3UTR CCA 90 bp | AGTCTCTCTAGGAGGAGGTGCACAGGGCCACATCTCCAGCAATGCTACAGTGGCACTGGCGCGAGCAGATaGCCATGCAGGCCACGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLSRRRCTGPHLQQCYSGTGASR*PCRPRP Trigger: GGGACGTGGCCTGCATGGCCATCTGCTCGCGCCAGT...GCCACTGTAGCATTGCTGGAGATGTGGCCCTGTGCACCTCCTCCTAGAGAGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR CCA 90 bp | AGGTGCACAGGGCCACATCTCCAGCAATGCTACAGTGGCGAGCACCCAGCTGCCAGGACTGCTGGAGGCTaGAACTCGAGCTCCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RCTGPHLQQCYSGEHPAARTAGG*NSSSSW Trigger: CCAAGAGGAGCTCGAGTTCCAGCCTCCAGCAGTCCT...GGCAGCTGGGTGCTCGCCACTGTAGCATTGCTGGAGATGTGGCCCTGTGCACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR GCA 90 bp | AGTCTCTCTAGGAGGAGGTGCACAGGGCCACATCTCCAGCAATGCTACAGTGGCGGAGCAGGCTCAGAGTaGACTGGGGTGTGGCCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLSRRRCTGPHLQQCYSGGAGSE*TGVWPF Trigger: GAACGGCCACACCCCAGTGCACTCTGAGCCTGCTCC...GCCACTGTAGCATTGCTGGAGATGTGGCCCTGTGCACCTCCTCCTAGAGAGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR GCA 90 bp | AGGTGCACAGGGCCACATCTCCAGCAATGCTACAGTGGCGAGCACCCAGCTGCCACGTGGAAGAGGATTTaGCAGGTGTTCCTCAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RCTGPHLQQCYSGEHPAATWKRI*QVFLSP Trigger: CGGGCTGAGGAACACCTGGCAAATCCTCTTCCACGT...GGCAGCTGGGTGCTCGCCACTGTAGCATTGCTGGAGATGTGGCCCTGTGCACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR CCA 90 bp | TACAACAGTCCCCTCTGTGACCACCCACAATCCTCACTAAGGGCACTGAGGAGCACTGGCGCGAGCAGATaGCCATGCAGGCCACGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: YNSPLCDHPQSSLRALRSTGASR*PCRPRP Trigger: GGGACGTGGCCTGCATGGCCATCTGCTCGCGCCAGT...GCTCCTCAGTGCCCTTAGTGAGGATTGTGGGTGGTCACAGAGGGGACTGTTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| CDS-3UTR CCA 90 bp | CCCCCATTTCTGCTAAGGATCTCTGAAACCCTGGCCTTTCTCTCTCCACTCGGCAGAAGCAGAAGGCCATaGCTGCCGGGCACTGGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: PPFLLRISETLAFLSPLGRSRRP*LPGTGA Trigger: CGCGCCAGTGCCCGGCAGCCATGGCCTTCTGCTTCT...GCCGAGTGGAGAGAGAAAGGCCAGGGTTTCAGAGATCCTTAGCAGAAATGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| 3UTR CAA 72 bp | ACTCCACGGATGAGGTTCAGGGCCGCGCACATGATGTaGAGAACAAGGGAGAGGACACCCAGGGCTGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: TPRMRFRAAHMM*RTRERTPRAVT Trigger: GGTGACAGCCCTGGGTGTCCTCTCCCTTGTTCTCAACATCATGTGCGCGGCCCTGAACCTCATCCGTGGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
||
| CDS-3UTR GCA 90 bp | CCTGCTGCACACACCCAGAGGCCTTGTAACCCTTTCTTCCTGTACATGTACAACGCAGAAGGCCATGGCTaGCGGGCACTGGCGCGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PAAHTQRPCNPFFLYMYNAEGHG*RALARA Trigger: TGCTCGCGCCAGTGCCCGGCAGCCATGGCCTTCTGC...GTTGTACATGTACAGGAAGAAAGGGTTACAAGGCCTCTGGGTGTGTGCAGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| CDS-3UTR CCA 90 bp | TGGCCGTTCAGCATGCCATTTGCCACATCTGTGTCCTCTAGGGACAGGACTGCTTGCCGGGCCAGCCTCTaGGCTAAGGTCTTGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WPFSMPFATSVSSRDRTACRASL*AKVLSC Trigger: GCAGCTCAAGACCTTAGCCCAGAGGCTGGCCCGGCA...AGCAGTCCTGTCCCTAGAGGACACAGATGTGGCAAATGGCATGCTGAACGGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
||
| CDS-3UTR GCA 90 bp | GTCTGCACCGGTTCCTGTGAGCTGCTGGGCAAGCAGCATCCTCCGGAAGAGCAGTGTGGCCGTTCAGCATaGCATTTGCCACATCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VCTGSCELLGKQHPPEEQCGRSA*HLPHLC Trigger: ACACAGATGTGGCAAATGGCATGCTGAACGGCCACA...CTGCTCTTCCGGAGGATGCTGCTTGCCCAGCAGCTCACAGGAACCGGTGCAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| CDS-3UTR GCA 90 bp | GACCATCACAGATGCTCTCTGAGCAAGCTCCTGCTCCAGCCGCCCTGTCCTAGCTCAGATTGCCTCTCCTaGAGCTGTCTGGTCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: DHHRCSLSKLLLQPPCPSSDCLS*SCLVRI Trigger: GATCCTGACCAGACAGCTGCAGGAGAGGCAATCTGA...GCTAGGACAGGGCGGCTGGAGCAGGAGCTTGCTCAGAGAGCATCTGTGATGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| 3UTR CAA 72 bp | CAGAGTGCACTGGGGTGTGGCCGTTCAGCATGCCATTaGCCACATCTGTGTCCTCTAGGGACAGGACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QSALGCGRSACH*PHLCPLGTGLL Trigger: CAGCAGTCCTGTCCCTAGAGGACACAGATGTGGCAAATGGCATGCTGAACGGCCACACCCCAGTGCACTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
||
| CDS-3UTR GCA 90 bp | GACCATCACAGATGCTCTCTGAGCAAGCTCCTGCTCCAGCCGCCCTGTCCTAGCGCTAAGGTCTTGAGCTaGCTCCTGCATTCCAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DHHRCSLSKLLLQPPCPSAKVLS*LLHSRN Trigger: GTTTCTGGAATGCAGGAGGCAGCTCAAGACCTTAGC...GCTAGGACAGGGCGGCTGGAGCAGGAGCTTGCTCAGAGAGCATCTGTGATGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR GCA 90 bp | TGTTCCTCAGCCCGTGCAGGTACGCATTGCCCAGGCAGATGGAGGCCAGCATCAGCTAAGGTCTTGAGCTaGCTCCTGCATTCCAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: CSSARAGTHCPGRWRPASAKVLS*LLHSRN Trigger: GTTTCTGGAATGCAGGAGGCAGCTCAAGACCTTAGC...TGATGCTGGCCTCCATCTGCCTGGGCAATGCGTACCTGCACGGGCTGAGGAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGCACAGGGCCACATCTCCAGCAATGCTACAGTGGCGAGCACCCAGCTGCCTCTCCTGCAGCTGTCTaGTCAGGATCTGATATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RCTGPHLQQCYSGEHPAASPAAV*SGSDMK Trigger: CTTCATATCAGATCCTGACCAGACAGCTGCAGGAGA...GGCAGCTGGGTGCTCGCCACTGTAGCATTGCTGGAGATGTGGCCCTGTGCACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| 3UTR CAA 72 bp | GAGTGGAAGAACCAAGCTGACCTCCAGTCCACTGGGTaGGCTGACCTGTGTGTTCCTTTCCCCCACCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: EWKNQADLQSTG*ADLCVPFPHLI Trigger: GATGAGGTGGGGGAAAGGAACACACAGGTCAGCCAACCCAGTGGACTGGAGGTCAGCTTGGTTCTTCCACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| CDS-3UTR GCA 90 bp | TACAACAGTCCCCTCTGTGACCACCCACAATCCTCACTAAGGGCACTGAGGAGCACGTGGAAGAGGATTTaGCAGGTGTTCCTCAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: YNSPLCDHPQSSLRALRSTWKRI*QVFLSP Trigger: CGGGCTGAGGAACACCTGGCAAATCCTCTTCCACGT...GCTCCTCAGTGCCCTTAGTGAGGATTGTGGGTGGTCACAGAGGGGACTGTTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| CDS-3UTR CCA 90 bp | GTCTGCACCGGTTCCTGTGAGCTGCTGGGCAAGCAGCATCCTCCGGAAGAGCAGAACTCGAGCTCCTCTTaGATCTTTTCTAAGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: VCTGSCELLGKQHPPEEQNSSSS*IFSKPL Trigger: GAGTGGCTTAGAAAAGATCCAAGAGGAGCTCGAGTT...CTGCTCTTCCGGAGGATGCTGCTTGCCCAGCAGCTCACAGGAACCGGTGCAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| CDS-3UTR CCA 90 bp | GAGGAGGTGCACAGGGCCACATCTCCAGCAATGCTACAGTGGCGAGCACCCAGCAACTCGAGCTCCTCTTaGATCTTTTCTAAGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: EEVHRATSPAMLQWRAPSNSSSS*IFSKPL Trigger: GAGTGGCTTAGAAAAGATCCAAGAGGAGCTCGAGTT...GCTGGGTGCTCGCCACTGTAGCATTGCTGGAGATGTGGCCCTGTGCACCTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| 3UTR CAA 72 bp | CATCCCTGTCAAACACACAGTAGAGAGCTGGAAGTGTaGCTGTTACAGGCGGCTCCCTCGGGAAGCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: HPCQTHSRELEV*LLQAAPSGSST Trigger: TGTGCTGCTTCCCGAGGGAGCCGCCTGTAACAGCAACACTTCCAGCTCTCTACTGTGTGTTTGACAGGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| CDS-3UTR TCA 90 bp | ATCCCTGTCAAACACACAGTAGAGAGCTGGAAGTGTTGCTGTTACAGGCGGCTCAAAGTCAGTGGAGGCTaGGAGGGGCAGTCCATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: IPVKHTVESWKCCCYRRLKVSGG*EGQSIP Trigger: AGGGATGGACTGCCCCTCTCAGCCTCCACTGACTTT...GAGCCGCCTGTAACAGCAACACTTCCAGCTCTCTACTGTGTGTTTGACAGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| CDS-3UTR TCA 90 bp | AAGCTGACCTCCAGTCCACTGGGTTGGCTGACCTGTGTGTTCCTTTCCCCCACCGGTCAGGATCTGATATaGAGACAGAAAAGCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: KLTSSPLGWLTCVFLSPTGQDLI*RQKSHS Trigger: GGAGTGGCTTTTCTGTCTTCATATCAGATCCTGACC...GGTGGGGGAAAGGAACACACAGGTCAGCCAACCCAGTGGACTGGAGGTCAGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| CDS-3UTR GCA 90 bp | ATCTCCAGCAATGCTACAGTGGCGAGCACCCAGCTGCCACAACAAAGGCAGAGATCAGATTGCCTCTCCTaGAGCTGTCTGGTCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: ISSNATVASTQLPQQRQRSDCLS*SCLVRI Trigger: GATCCTGACCAGACAGCTGCAGGAGAGGCAATCTGA...TCTCTGCCTTTGTTGTGGCAGCTGGGTGCTCGCCACTGTAGCATTGCTGGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR CCA 90 bp | GAGGAGGTGCACAGGGCCACATCTCCAGCAATGCTACAGTGGCGAGCACCCAGCTTTCCAACTTCCTCTTaGGCAACCTGTAAAGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: EEVHRATSPAMLQWRAPSFPTSS*ATCKEC Trigger: GCATTCTTTACAGGTTGCCCAAGAGGAAGTTGGAAA...GCTGGGTGCTCGCCACTGTAGCATTGCTGGAGATGTGGCCCTGTGCACCTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| 3UTR CAA 72 bp | AGAGCAGCCAGCGACAGGCAAAGAAACACGCCTGCCTaGGAACCAGATTGTCCTGGCATCAAGAATCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: RAASDRQRNTPA*EPDCPGIKNPT Trigger: AGTGGGATTCTTGATGCCAGGACAATCTGGTTCCAAGGCAGGCGTGTTTCTTTGCCTGTCGCTGGCTGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| CDS-3UTR TCA 90 bp | CCAACTCCTATGCTCCAGATAGCCACCTGCTTCGGCCTGCTGGCTATGGCCCTTTGTCTGGTCAGGATCTaGTATGAAGACAGAAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PTPMLQIATCFGLLAMALCLVRI*YEDRKA Trigger: GGCTTTTCTGTCTTCATATCAGATCCTGACCAGACA...AAGGGCCATAGCCAGCAGGCCGAAGCAGGTGGCTATCTGGAGCATAGGAGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| CDS-3UTR GCA 90 bp | CCCCCATTTCTGCTAAGGATCTCTGAAACCCTGGCCTTTCTCTCTCCACTCGGCTGTGGCCGTTCAGCATaGCATTTGCCACATCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PPFLLRISETLAFLSPLGCGRSA*HLPHLC Trigger: ACACAGATGTGGCAAATGGCATGCTGAACGGCCACA...GCCGAGTGGAGAGAGAAAGGCCAGGGTTTCAGAGATCCTTAGCAGAAATGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR CCA 90 bp | CTACAGAGCAAGTTTCAGGACAGCCAAGGCTGGAGAAACCCTGTATTGAAAAACTGCCGGGCCAGCCTCTaGGCTAAGGTCTTGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQSKFQDSQGWRNPVLKNCRASL*AKVLSC Trigger: GCAGCTCAAGACCTTAGCCCAGAGGCTGGCCCGGCA...GTTTTTCAATACAGGGTTTCTCCAGCCTTGGCTGTCCTGAAACTTGCTCTGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| CDS-3UTR CCA 90 bp | GACCATCACAGATGCTCTCTGAGCAAGCTCCTGCTCCAGCCGCCCTGTCCTAGCTTTCCAACTTCCTCTTaGGCAACCTGTAAAGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: DHHRCSLSKLLLQPPCPSFPTSS*ATCKEC Trigger: GCATTCTTTACAGGTTGCCCAAGAGGAAGTTGGAAA...GCTAGGACAGGGCGGCTGGAGCAGGAGCTTGCTCAGAGAGCATCTGTGATGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR CCA 90 bp | CCCCCATTTCTGCTAAGGATCTCTGAAACCCTGGCCTTTCTCTCTCCACTCGGCAAAGCCACTCCTACGTaGAAGAGGATTTGCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PPFLLRISETLAFLSPLGKATPT*KRICQV Trigger: CACCTGGCAAATCCTCTTCCACGTAGGAGTGGCTTT...GCCGAGTGGAGAGAGAAAGGCCAGGGTTTCAGAGATCCTTAGCAGAAATGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR TCA 90 bp | ATCTCCAGCAATGCTACAGTGGCGAGCACCCAGCTGCCACAACAAAGGCAGAGAGGTCAGGATCTGATATaGAGACAGAAAAGCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: ISSNATVASTQLPQQRQRGQDLI*RQKSHS Trigger: GGAGTGGCTTTTCTGTCTTCATATCAGATCCTGACC...TCTCTGCCTTTGTTGTGGCAGCTGGGTGCTCGCCACTGTAGCATTGCTGGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR GCA 90 bp | CTTCTGCTTTCCTCTTTCCCACTTCAAAATTCTGTGTCAGGAAGAGTGAGCATTGCGAGCAGATGGCCATaGAGGCCACGTCCCCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: LLLSSFPLQNSVSGRVSIASRWP*RPRPPM Trigger: CATCGGGGGACGTGGCCTGCATGGCCATCTGCTCGC...AATGCTCACTCTTCCTGACACAGAATTTTGAAGTGGGAAAGAGGAAAGCAGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR CCA 90 bp | CTTCTGCTTTCCTCTTTCCCACTTCAAAATTCTGTGTCAGGAAGAGTGAGCATTATGGCTGCCGGGCACTaGCGCGAGCAGATGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LLLSSFPLQNSVSGRVSIMAAGH*REQMAM Trigger: CATGGCCATCTGCTCGCGCCAGTGCCCGGCAGCCAT...AATGCTCACTCTTCCTGACACAGAATTTTGAAGTGGGAAAGAGGAAAGCAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR CCA 90 bp | AAGCTGACCTCCAGTCCACTGGGTTGGCTGACCTGTGTGTTCCTTTCCCCCACCTGGGAGGAGCTCATGTaGTTAAAATGCCACTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KLTSSPLGWLTCVFLSPTWEELM*LKCHFV Trigger: AACAAAGTGGCATTTTAACCACATGAGCTCCTCCCA...GGTGGGGGAAAGGAACACACAGGTCAGCCAACCCAGTGGACTGGAGGTCAGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| CDS-3UTR GCA 90 bp | CAGAGAAGTGCCAGTTACACAAAGCTTTTGAGTGTTAACACCTACTTAATACCTGCAGAAGGCCATGGCTaGCGGGCACTGGCGCGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QRSASYTKLLSVNTYLIPAEGHG*RALARA Trigger: TGCTCGCGCCAGTGCCCGGCAGCCATGGCCTTCTGC...AGGTATTAAGTAGGTGTTAACACTCAAAAGCTTTGTGTAACTGGCACTTCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR GCA 90 bp | TCAACCCATGAAATTTTGGGTATATTCCAAGAACAAGCTAGAGGGGTGAACCCCGTGTTCCTCAGCCCGTaGAGGTACGCATTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: STHEILGIFQEQARGVNPVFLSP*RYALPR Trigger: CCTGGGCAATGCGTACCTGCACGGGCTGAGGAACAC...GGGGTTCACCCCTCTAGCTTGTTCTTGGAATATACCCAAAATTTCATGGGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR CCA 90 bp | CTTCAAAATTCTGTGTCAGGAAGAGTGAGCATTTGCCTGTACAGTAGACACGAATGCCGGGCCAGCCTCTaGGCTAAGGTCTTGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQNSVSGRVSICLYSRHECRASL*AKVLSC Trigger: GCAGCTCAAGACCTTAGCCCAGAGGCTGGCCCGGCA...TTCGTGTCTACTGTACAGGCAAATGCTCACTCTTCCTGACACAGAATTTTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| 3UTR CAA 72 bp | TTAGGTGCTCAAGAGAGGTTTGGGGCAGTAATTAACTaGGGAAGTCTCTCTAGGAGGAGGTGCACAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGAQERFGAVIN*GSLSRRRCTGP Trigger: TGGCCCTGTGCACCTCCTCCTAGAGAGACTTCCCAAGTTAATTACTGCCCCAAACCTCTCTTGAGCACCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| 3UTR CAA 72 bp | CGACAGGCAAAGAAACACGCCTGCCTTGGAACCAGATaGTCCTGGCATCAAGAATCCCACTGGGCTACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RQAKKHACLGTR*SWHQESHWATN Trigger: ATTTGTAGCCCAGTGGGATTCTTGATGCCAGGACAATCTGGTTCCAAGGCAGGCGTGTTTCTTTGCCTGTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| 3UTR CAA 72 bp | TACTGCAGGATGCCCTCATCACACTCCATAGTCAGATaGCCTCTCCTGCAGCTGTCTGGTCAGGATCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: YCRMPSSHSIVR*PLLQLSGQDLI Trigger: TATCAGATCCTGACCAGACAGCTGCAGGAGAGGCAATCTGACTATGGAGTGTGATGAGGGCATCCTGCAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
||
| CDS-3UTR TCA 90 bp | TCAACCCATGAAATTTTGGGTATATTCCAAGAACAAGCTAGAGGGGTGAACCCCAAAGTCAGTGGAGGCTaGGAGGGGCAGTCCATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: STHEILGIFQEQARGVNPKVSGG*EGQSIP Trigger: AGGGATGGACTGCCCCTCTCAGCCTCCACTGACTTT...GGGGTTCACCCCTCTAGCTTGTTCTTGGAATATACCCAAAATTTCATGGGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR GCA 90 bp | CAGAGAAGTGCCAGTTACACAAAGCTTTTGAGTGTTAACACCTACTTAATACCTGCGAGCAGATGGCCATaGAGGCCACGTCCCCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: QRSASYTKLLSVNTYLIPASRWP*RPRPPM Trigger: CATCGGGGGACGTGGCCTGCATGGCCATCTGCTCGC...AGGTATTAAGTAGGTGTTAACACTCAAAAGCTTTGTGTAACTGGCACTTCTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR CCA 90 bp | ATCCCTGTCAAACACACAGTAGAGAGCTGGAAGTGTTGCTGTTACAGGCGGCTCAAGCCACTCTTCATCTaGGAGGAGCTCATGTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: IPVKHTVESWKCCCYRRLKPLFI*EELMWL Trigger: TAACCACATGAGCTCCTCCCAGATGAAGAGTGGCTT...GAGCCGCCTGTAACAGCAACACTTCCAGCTCTCTACTGTGTGTTTGACAGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| CDS-3UTR TCA 90 bp | ATCTTTTCTAAGCCACTCTTCATCTGGGAGGAGCTCATGTGGTTAAAATGCCACTCTGGGCTAAGGTCTTaGGCTGCCTCCTGCATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IFSKPLFIWEELMWLKCHSGLRS*AASCIP Trigger: TGGAATGCAGGAGGCAGCTCAAGACCTTAGCCCAGA...GTGGCATTTTAACCACATGAGCTCCTCCCAGATGAAGAGTGGCTTAGAAAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGAAGTGCCAGTTACACAAAGCTTTTGAGTGTTAACACCTACTTAATACCTAGGACTGCTGGAGGCTaGAACTCGAGCTCCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QRSASYTKLLSVNTYLIPRTAGG*NSSSSW Trigger: CCAAGAGGAGCTCGAGTTCCAGCCTCCAGCAGTCCT...AGGTATTAAGTAGGTGTTAACACTCAAAAGCTTTGTGTAACTGGCACTTCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR CCA 90 bp | TCAACCCATGAAATTTTGGGTATATTCCAAGAACAAGCTAGAGGGGTGAACCCCAAAGCCACTCCTACGTaGAAGAGGATTTGCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: STHEILGIFQEQARGVNPKATPT*KRICQV Trigger: CACCTGGCAAATCCTCTTCCACGTAGGAGTGGCTTT...GGGGTTCACCCCTCTAGCTTGTTCTTGGAATATACCCAAAATTTCATGGGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR TCA 90 bp | CAGAGAAGTGCCAGTTACACAAAGCTTTTGAGTGTTAACACCTACTTAATACCTTCTGGGCTAAGGTCTTaGGCTGCCTCCTGCATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QRSASYTKLLSVNTYLIPSGLRS*AASCIP Trigger: TGGAATGCAGGAGGCAGCTCAAGACCTTAGCCCAGA...AGGTATTAAGTAGGTGTTAACACTCAAAAGCTTTGTGTAACTGGCACTTCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR GCA 90 bp | CTTCAAAATTCTGTGTCAGGAAGAGTGAGCATTTGCCTGTACAGTAGACACGAAGCTAAGGTCTTGAGCTaGCTCCTGCATTCCAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LQNSVSGRVSICLYSRHEAKVLS*LLHSRN Trigger: GTTTCTGGAATGCAGGAGGCAGCTCAAGACCTTAGC...TTCGTGTCTACTGTACAGGCAAATGCTCACTCTTCCTGACACAGAATTTTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR CCA 90 bp | TCAACCCATGAAATTTTGGGTATATTCCAAGAACAAGCTAGAGGGGTGAACCCCTCTCCTGCAGCTGTCTaGTCAGGATCTGATATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: STHEILGIFQEQARGVNPSPAAV*SGSDMK Trigger: CTTCATATCAGATCCTGACCAGACAGCTGCAGGAGA...GGGGTTCACCCCTCTAGCTTGTTCTTGGAATATACCCAAAATTTCATGGGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR TCA 90 bp | TCAACCCATGAAATTTTGGGTATATTCCAAGAACAAGCTAGAGGGGTGAACCCCTGTCTGGTCAGGATCTaGTATGAAGACAGAAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: STHEILGIFQEQARGVNPCLVRI*YEDRKA Trigger: GGCTTTTCTGTCTTCATATCAGATCCTGACCAGACA...GGGGTTCACCCCTCTAGCTTGTTCTTGGAATATACCCAAAATTTCATGGGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR CCA 90 bp | TCAACCCATGAAATTTTGGGTATATTCCAAGAACAAGCTAGAGGGGTGAACCCCTGGGAGGAGCTCATGTaGTTAAAATGCCACTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: STHEILGIFQEQARGVNPWEELM*LKCHFV Trigger: AACAAAGTGGCATTTTAACCACATGAGCTCCTCCCA...GGGGTTCACCCCTCTAGCTTGTTCTTGGAATATACCCAAAATTTCATGGGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR CCA 90 bp | CAGAGAAGTGCCAGTTACACAAAGCTTTTGAGTGTTAACACCTACTTAATACCTAAGCCACTCTTCATCTaGGAGGAGCTCATGTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: QRSASYTKLLSVNTYLIPKPLFI*EELMWL Trigger: TAACCACATGAGCTCCTCCCAGATGAAGAGTGGCTT...AGGTATTAAGTAGGTGTTAACACTCAAAAGCTTTGTGTAACTGGCACTTCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS CCA 90 bp | GCCAGGTGTTCCTCAGCCCGTGCAGGTACGCATTGCCCAGGCAGATaGAGGCCAGCATCAGCAGCACCTTCAGCGTCCGGGCTGGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: ARCSSARAGTHCPGR*RPASAAPSASGLDW Trigger: CCAGTCCAGCCCGGACGCTGAAGGTGCTGCTGATGCTGGCCTCCATCTGCCTGGGCAATGCGTACCTGCACGGGCTGAGGAACACCTGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215056.2 |
||
| CDS CCA 90 bp | CACCACAGAGCCTCCAAGAAGCAGAAGGCCATGGCTGCCGGGCACTaGCGCGAGCAGATGGCCATGCAGGCCACGTCCCCCGATGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: HHRASKKQKAMAAGH*REQMAMQATSPDDE Trigger: TTCATCATCGGGGGACGTGGCCTGCATGGCCATCTGCTCGCGCCAGTGCCCGGCAGCCATGGCCTTCTGCTTCTTGGAGGCTCTGTGGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR CAA 90 bp | AGGTGCACAGGGCCACATCTCCAGCAATGCTACAGTGGCGAGCACCCAGCTGCCCCGTGCAGGTACGCATaGCCCAGGCAGATGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RCTGPHLQQCYSGEHPAAPCRYA*PRQMEA Trigger: GGCCTCCATCTGCCTGGGCAATGCGTACCTGCACGG...GGCAGCTGGGTGCTCGCCACTGTAGCATTGCTGGAGATGTGGCCCTGTGCACCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS TCA 90 bp | AAGGCCGGGAGGCCAGGCCAACGCAGGTGGTGTCGTAGGAAGCTATaGAGTCCCACCACAGAGCCTCCAAGAAGCAGAAGGCCATGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KAGRPGQRRWCRRKL*SPTTEPPRSRRPWL Trigger: CAGCCATGGCCTTCTGCTTCTTGGAGGCTCTGTGGTGGGACTTCATAGCTTCCTACGACACCACCTGCGTTGGCCTGGCCTCCCGGCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 ENSMUST00000215056.2 |
||
| CDS TCA 90 bp | CACAGCCTCGGCCTGGATGCCGGGCCAGCCTCTGGGCTAAGGTCTTaGGCTGCCTCCTGCATTCCAGAAACTCCTGGGCGTAGTAAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: HSLGLDAGPASGLRS*AASCIPETPGRSKS Trigger: ACTTTTACTACGCCCAGGAGTTTCTGGAATGCAGGAGGCAGCTCAAGACCTTAGCCCAGAGGCTGGCCCGGCATCCAGGCCGAGGCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 ENSMUST00000139193.2 |
||
| CDS-3UTR CAA 90 bp | CCAACTCCTATGCTCCAGATAGCCACCTGCTTCGGCCTGCTGGCTATGGCCCTTCTCTGGGCTAAGGTCTaGAGCTGCCTCCTGCATTCC | + |
|
Preference number: 5 (lower is better) Translates to: PTPMLQIATCFGLLAMALLWAKV*SCLLHS Trigger: GGAATGCAGGAGGCAGCTCAAGACCTTAGCCCAGAG...AAGGGCCATAGCCAGCAGGCCGAAGCAGGTGGCTATCTGGAGCATAGGAGTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| CDS-3UTR CAA 90 bp | ACGGATGAGGTTCAGGGCCGCGCACATGATGTTGAGAACAAGGGAGAGGACACCCTCTGGGCTAAGGTCTaGAGCTGCCTCCTGCATTCC | + |
|
Preference number: 5 (lower is better) Translates to: TDEVQGRAHDVENKGEDTLWAKV*SCLLHS Trigger: GGAATGCAGGAGGCAGCTCAAGACCTTAGCCCAGAG...GGTGTCCTCTCCCTTGTTCTCAACATCATGTGCGCGGCCCTGAACCTCATCCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139193.2 |
||
| CDS-3UTR CAA 90 bp | AGCATCCTCCGGAAGAGCAGCCAGCGACAGGCAAAGAAACACGCCTGCCTTGGATACGTGGAAGAGGATTaGCCAGGTGTTCCTCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SILRKSSQRQAKKHACLGYVEED*PGVPQP Trigger: GGGCTGAGGAACACCTGGCAAATCCTCTTCCACGTA...TCCAAGGCAGGCGTGTTTCTTTGCCTGTCGCTGGCTGCTCTTCCGGAGGATGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| CDS-3UTR CAA 90 bp | GACCATCACAGATGCTCTCTGAGCAAGCTCCTGCTCCAGCCGCCCTGTCCTAGCCGTTCAGCATGCCATTaGCCACATCTGTGTCCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: DHHRCSLSKLLLQPPCPSRSACH*PHLCPL Trigger: TAGAGGACACAGATGTGGCAAATGGCATGCTGAACG...GCTAGGACAGGGCGGCTGGAGCAGGAGCTTGCTCAGAGAGCATCTGTGATGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR CAA 90 bp | AAGCTGACCTCCAGTCCACTGGGTTGGCTGACCTGTGTGTTCCTTTCCCCCACCCACTCCATAGTCAGATaGCCTCTCCTGCAGCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KLTSSPLGWLTCVFLSPTHSIVR*PLLQLS Trigger: AGACAGCTGCAGGAGAGGCAATCTGACTATGGAGTG...GGTGGGGGAAAGGAACACACAGGTCAGCCAACCCAGTGGACTGGAGGTCAGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078547.12 |
||
| CDS-3UTR CAA 90 bp | CCCCCATTTCTGCTAAGGATCTCTGAAACCCTGGCCTTTCTCTCTCCACTCGGCGCCGCGCACATGATGTaGAGAACAAGGGAGAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: PPFLLRISETLAFLSPLGAAHMM*RTRERT Trigger: TGTCCTCTCCCTTGTTCTCAACATCATGTGCGCGGC...GCCGAGTGGAGAGAGAAAGGCCAGGGTTTCAGAGATCCTTAGCAGAAATGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR CAA 90 bp | AGTCTCTCTAGGAGGAGGTGCACAGGGCCACATCTCCAGCAATGCTACAGTGGCCACTCCATAGTCAGATaGCCTCTCCTGCAGCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLSRRRCTGPHLQQCYSGHSIVR*PLLQLS Trigger: AGACAGCTGCAGGAGAGGCAATCTGACTATGGAGTG...GCCACTGTAGCATTGCTGGAGATGTGGCCCTGTGCACCTCCTCCTAGAGAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR CAA 90 bp | CTTCTGCTTTCCTCTTTCCCACTTCAAAATTCTGTGTCAGGAAGAGTGAGCATTCCGTGCAGGTACGCATaGCCCAGGCAGATGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLLSSFPLQNSVSGRVSIPCRYA*PRQMEA Trigger: GGCCTCCATCTGCCTGGGCAATGCGTACCTGCACGG...AATGCTCACTCTTCCTGACACAGAATTTTGAAGTGGGAAAGAGGAAAGCAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR CAA 90 bp | CTTCTGCTTTCCTCTTTCCCACTTCAAAATTCTGTGTCAGGAAGAGTGAGCATTCTCTGGGCTAAGGTCTaGAGCTGCCTCCTGCATTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLLSSFPLQNSVSGRVSILWAKV*SCLLHS Trigger: GGAATGCAGGAGGCAGCTCAAGACCTTAGCCCAGAG...AATGCTCACTCTTCCTGACACAGAATTTTGAAGTGGGAAAGAGGAAAGCAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
||
| CDS-3UTR CAA 90 bp | CTTCAAAATTCTGTGTCAGGAAGAGTGAGCATTTGCCTGTACAGTAGACACGAATACGTGGAAGAGGATTaGCCAGGTGTTCCTCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LQNSVSGRVSICLYSRHEYVEED*PGVPQP Trigger: GGGCTGAGGAACACCTGGCAAATCCTCTTCCACGTA...TTCGTGTCTACTGTACAGGCAAATGCTCACTCTTCCTGACACAGAATTTTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
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| CDS-3UTR CAA 90 bp | CTTCAAAATTCTGTGTCAGGAAGAGTGAGCATTTGCCTGTACAGTAGACACGAACGTTCAGCATGCCATTaGCCACATCTGTGTCCTCTA | + |
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Preference number: 5 (lower is better) Translates to: LQNSVSGRVSICLYSRHERSACH*PHLCPL Trigger: TAGAGGACACAGATGTGGCAAATGGCATGCTGAACG...TTCGTGTCTACTGTACAGGCAAATGCTCACTCTTCCTGACACAGAATTTTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
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| CDS-3UTR CAA 90 bp | CAGAGAAGTGCCAGTTACACAAAGCTTTTGAGTGTTAACACCTACTTAATACCTGCCGCGCACATGATGTaGAGAACAAGGGAGAGGACA | + |
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Preference number: 5 (lower is better) Translates to: QRSASYTKLLSVNTYLIPAAHMM*RTRERT Trigger: TGTCCTCTCCCTTGTTCTCAACATCATGTGCGCGGC...AGGTATTAAGTAGGTGTTAACACTCAAAAGCTTTGTGTAACTGGCACTTCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
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| CDS CCA 72 bp | GCCTCCAAGAAGCAGAAGGCCATGGCTGCCGGGCACTaGCGCGAGCAGATGGCCATGCAGGCCACGTCCCCC | + |
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Preference number: 6 (lower is better) Translates to: ASKKQKAMAAGH*REQMAMQATSP Trigger: GGGGGACGTGGCCTGCATGGCCATCTGCTCGCGCCAGTGCCCGGCAGCCATGGCCTTCTGCTTCTTGGAGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
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| CDS CAA 72 bp | CGGCCTGGATGCCGGGCCAGCCTCTGGGCTAAGGTCTaGAGCTGCCTCCTGCATTCCAGAAACTCCTGGGCG | + |
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Preference number: 6 (lower is better) Translates to: RPGCRASLWAKV*SCLLHSRNSWA Trigger: CGCCCAGGAGTTTCTGGAATGCAGGAGGCAGCTCAAGACCTTAGCCCAGAGGCTGGCCCGGCATCCAGGCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 ENSMUST00000139193.2 |
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| CDS CCA 72 bp | AGAAGGCCATGGCTGCCGGGCACTGGCGCGAGCAGATaGCCATGCAGGCCACGTCCCCCGATGATGAAAAAT | + |
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Preference number: 6 (lower is better) Translates to: RRPWLPGTGASR*PCRPRPPMMKN Trigger: ATTTTTCATCATCGGGGGACGTGGCCTGCATGGCCATCTGCTCGCGCCAGTGCCCGGCAGCCATGGCCTTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 |
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| CDS TCA 72 bp | CAGAAACTCCTGGGCGTAGTAAAAGTCAGTGGAGGCTaGGAGGGGCAGTCCATCCCTCACCCGTACGATGCT | + |
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Preference number: 6 (lower is better) Translates to: QKLLGVVKVSGG*EGQSIPHPYDA Trigger: AGCATCGTACGGGTGAGGGATGGACTGCCCCTCTCAGCCTCCACTGACTTTTACTACGCCCAGGAGTTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078547.12 ENSMUST00000111560.10 ENSMUST00000139193.2 ENSMUST00000154978.3 |
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