Pregenerated sensors for SEC22A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034473Ensembl transcript IDs: ENSMUST00000043521.5, ENSMUST00000154064.3, ENSMUST00000232420.2
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCAGCACAGCCACACACACCTCACGAGGACCCCGAGGGAGCGAATaGTTGGGAGTAAAGGCGCACTTCAAATGGAAGCTGCTATCAGTG | + |
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Preference number: 1 (lower is better) Translates to: SSTATHTSRGPRGSE*LGVKAHFKWKLLSV Trigger: CACTGATAGCAGCTTCCATTTGAAGTGCGCCTTTACTCCCAAGCATTCGCTCCCTCGGGGTCCTCGTGAGGTGTGTGTGGCTGTGCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR GCA 90 bp | GAAGGGAGATGTCAGACATCATGGTCAGGAGCCTTGCCTTGGGCTTaGCTCAGCCAGATCTGCAGTGTAACAAACGCTCCCACAGTCACA | + |
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Preference number: 1 (lower is better) Translates to: EGRCQTSWSGALPWA*LSQICSVTNAPTVT Trigger: TGTGACTGTGGGAGCGTTTGTTACACTGCAGATCTGGCTGAGGCAAGCCCAAGGCAAGGCTCCTGACCATGATGTCTGACATCTCCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
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| 3UTR CCA 90 bp | TCATCCGAAGGGAGATGTCAGACATCATGGTCAGGAGCCTTGCCTTaGGCTTGCCTCAGCCAGATCTGCAGTGTAACAAACGCTCCCACA | + |
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Preference number: 1 (lower is better) Translates to: SSEGRCQTSWSGALP*ACLSQICSVTNAPT Trigger: TGTGGGAGCGTTTGTTACACTGCAGATCTGGCTGAGGCAAGCCCAAGGCAAGGCTCCTGACCATGATGTCTGACATCTCCCTTCGGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
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| 3UTR CCA 90 bp | TGGTGCGCAATTAGCGCACGTGTACTTAGCTATGTGACACGTAAGTaGGGATCTGATTACTCCAGCACAGCCACACACACCTCACGAGGA | + |
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Preference number: 1 (lower is better) Translates to: WCAISARVLSYVTRK*GSDYSSTATHTSRG Trigger: TCCTCGTGAGGTGTGTGTGGCTGTGCTGGAGTAATCAGATCCCCACTTACGTGTCACATAGCTAAGTACACGTGCGCTAATTGCGCACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR GCA 90 bp | TCTACACTAATGCCTCACAAAGGCAAACTTAGGTTGCAGCATTTCTaGCTGGTCCTCAGAGCACGTCCCAGGACTAAGCTTTGCTTAACT | + |
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Preference number: 1 (lower is better) Translates to: STLMPHKGKLRLQHF*LVLRARPRTKLCLT Trigger: AGTTAAGCAAAGCTTAGTCCTGGGACGTGCTCTGAGGACCAGGCAGAAATGCTGCAACCTAAGTTTGCCTTTGTGAGGCATTAGTGTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR CCA 90 bp | AGTGAAGGTTCCAGGTATCTTCCACTTTTGCAAGTGTCCACACAATaGGTTAGAGAGATGAGGCAGTTCAGTGACTCCTCCTATCAAGTA | + |
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Preference number: 1 (lower is better) Translates to: SEGSRYLPLLQVSTQ*VREMRQFSDSSYQV Trigger: TACTTGATAGGAGGAGTCACTGAACTGCCTCATCTCTCTAACCCATTGTGTGGACACTTGCAAAAGTGGAAGATACCTGGAACCTTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR TCA 90 bp | CAGCCCCTGAAGGGACTACATACCAAGGCCCATTGTTTTGAGGGATaGTATAAAGTTACCAGAATCCTATGCAGTCCTTGTTTGGAATCT | + |
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Preference number: 1 (lower is better) Translates to: QPLKGLHTKAHCFEG*YKVTRILCSPCLES Trigger: AGATTCCAAACAAGGACTGCATAGGATTCTGGTAACTTTATATCATCCCTCAAAACAATGGGCCTTGGTATGTAGTCCCTTCAGGGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR GCA 90 bp | AGTTTTCCATTATCCTTGGAGTATCCCACAGGGCTCTCATTTTGGTaGCAGGCAACACCTTTCACTATTACAATGAATGTGCTACTTGGG | + |
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Preference number: 1 (lower is better) Translates to: SFPLSLEYPTGLSFW*QATPFTITMNVLLG Trigger: CCCAAGTAGCACATTCATTGTAATAGTGAAAGGTGTTGCCTGGCACCAAAATGAGAGCCCTGTGGGATACTCCAAGGATAATGGAAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR TCA 90 bp | GATACATGTTGCACAGACAGATTAAGCCGAAAGTCAGAAATGACTTaGCATTCCGCCAGCTGGTGTAGTACACAAGTAAATAACACTGGT | + |
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Preference number: 1 (lower is better) Translates to: DTCCTDRLSRKSEMT*HSASWCSTQVNNTG Trigger: ACCAGTGTTATTTACTTGTGTACTACACCAGCTGGCGGAATGTCAAGTCATTTCTGACTTTCGGCTTAATCTGTCTGTGCAACATGTATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
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| 3UTR GCA 90 bp | GCATGCATACACACAGAAATGGAAACCTGTGACAAACAGATAATCTaGACAATATGCAAATACAATGTCTATTTAAGAGTTCTGCTCATT | + |
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Preference number: 1 (lower is better) Translates to: ACIHTEMETCDKQII*TICKYNVYLRVLLI Trigger: AATGAGCAGAACTCTTAAATAGACATTGTATTTGCATATTGTGCAGATTATCTGTTTGTCACAGGTTTCCATTTCTGTGTGTATGCATGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR-3UTR CCA 90 bp | TCTGATTACTCCAGCACAGCCACACACACCTCACGAGGACCCCGAGGGAGCGAACAAACACAGTCCATGTaGTGCCTCGCTCGGGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: SDYSSTATHTSRGPRGSEQTQSM*CLARGC Trigger: GCAGCCCCGAGCGAGGCACCACATGGACTGTGTTTG...TTCGCTCCCTCGGGGTCCTCGTGAGGTGTGTGTGGCTGTGCTGGAGTAATCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR CAA 90 bp | AGCACAGCCACACACACCTCACGAGGACCCCGAGGGAGCGAATGCTaGGGAGTAAAGGCGCACTTCAAATGGAAGCTGCTATCAGTGCTA | + |
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Preference number: 2 (lower is better) Translates to: STATHTSRGPRGSEC*GVKAHFKWKLLSVL Trigger: TAGCACTGATAGCAGCTTCCATTTGAAGTGCGCCTTTACTCCCAAGCATTCGCTCCCTCGGGGTCCTCGTGAGGTGTGTGTGGCTGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR CAA 90 bp | CGAAGGGAGATGTCAGACATCATGGTCAGGAGCCTTGCCTTGGGCTaGCCTCAGCCAGATCTGCAGTGTAACAAACGCTCCCACAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: RREMSDIMVRSLALG*PQPDLQCNKRSHSH Trigger: GTGACTGTGGGAGCGTTTGTTACACTGCAGATCTGGCTGAGGCAAGCCCAAGGCAAGGCTCCTGACCATGATGTCTGACATCTCCCTTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
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| 3UTR CAA 90 bp | ATCATCCGAAGGGAGATGTCAGACATCATGGTCAGGAGCCTTGCCTaGGGCTTGCCTCAGCCAGATCTGCAGTGTAACAAACGCTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: IIRREMSDIMVRSLA*GLPQPDLQCNKRSH Trigger: GTGGGAGCGTTTGTTACACTGCAGATCTGGCTGAGGCAAGCCCAAGGCAAGGCTCCTGACCATGATGTCTGACATCTCCCTTCGGATGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
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| 3UTR-3UTR TCA 90 bp | GCCTTGCCTTGGGCTTGCCTCAGCCAGATCTGCAGTGTAACAAACGCTCCCACAGCCGAAAGTCAGAAATaGCTTGACATTCCGCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: ALPWACLSQICSVTNAPTAESQK*LDIPPA Trigger: AGCTGGCGGAATGTCAAGTCATTTCTGACTTTCGGC...TGTGGGAGCGTTTGTTACACTGCAGATCTGGCTGAGGCAAGCCCAAGGCAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
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| 3UTR CAA 90 bp | GGCAAATCATCCGAAGGGAGATGTCAGACATCATGGTCAGGAGCCTaGCCTTGGGCTTGCCTCAGCCAGATCTGCAGTGTAACAAACGCT | + |
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Preference number: 2 (lower is better) Translates to: GKSSEGRCQTSWSGA*PWACLSQICSVTNA Trigger: AGCGTTTGTTACACTGCAGATCTGGCTGAGGCAAGCCCAAGGCAAGGCTCCTGACCATGATGTCTGACATCTCCCTTCGGATGATTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
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| 3UTR-3UTR GCA 90 bp | TCATGGTCAGGAGCCTTGCCTTGGGCTTGCCTCAGCCAGATCTGCAGTGTAACAAAAGCTGCCAGAGGTTaGGCAGTTCGTAGAGATACA | + |
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Preference number: 2 (lower is better) Translates to: SWSGALPWACLSQICSVTKAARG*AVRRDT Trigger: TGTATCTCTACGAACTGCGCAACCTCTGGCAGCTTT...TGTTACACTGCAGATCTGGCTGAGGCAAGCCCAAGGCAAGGCTCCTGACCATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
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| 3UTR-3UTR CCA 90 bp | TTCATCTTTGACAGAGCCCTGTCTAACTTGCTCCCTTCTGACCCTAGCTTCTGGTGCAGCATTTCTGCCTaGTCCTCAGAGCACGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: FIFDRALSNLLPSDPSFWCSISA*SSEHVP Trigger: TGGGACGTGCTCTGAGGACCAGGCAGAAATGCTGCA...CCAGAAGCTAGGGTCAGAAGGGAGCAAGTTAGACAGGGCTCTGTCAAAGATGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR-3UTR GCA 90 bp | GCCTTGCCTTGGGCTTGCCTCAGCCAGATCTGCAGTGTAACAAACGCTCCCACACGTAGAGATACATGTTaGACAGACAGATTAAGCCGA | + |
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Preference number: 2 (lower is better) Translates to: ALPWACLSQICSVTNAPTRRDTC*TDRLSR Trigger: TCGGCTTAATCTGTCTGTGCAACATGTATCTCTACG...TGTGGGAGCGTTTGTTACACTGCAGATCTGGCTGAGGCAAGCCCAAGGCAAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
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| 3UTR-3UTR TCA 90 bp | TGTCAGGGGACGTCTCATTTCTCACACTCAGCAGCTCTGGAACAAATGAACTGGCTCTCCTTCTTCCCCTaGAGGCAAAGGCAAATCATC | + |
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Preference number: 2 (lower is better) Translates to: CQGTSHFSHSAALEQMNWLSFFP*RQRQII Trigger: GATGATTTGCCTTTGCCTTCAGGGGAAGAAGGAGAG...CCAGTTCATTTGTTCCAGAGCTGCTGAGTGTGAGAAATGAGACGTCCCCTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR-3UTR TCA 90 bp | TTCATCTTTGACAGAGCCCTGTCTAACTTGCTCCCTTCTGACCCTAGCTTCTGGCTCTCCCACACCAGGTaGTCTCCAGAGTTAAAAGGT | + |
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Preference number: 2 (lower is better) Translates to: FIFDRALSNLLPSDPSFWLSHTR*SPELKG Trigger: ACCTTTTAACTCTGGAGATCACCTGGTGTGGGAGAG...CCAGAAGCTAGGGTCAGAAGGGAGCAAGTTAGACAGGGCTCTGTCAAAGATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR-3UTR CCA 90 bp | TTCATCTTTGACAGAGCCCTGTCTAACTTGCTCCCTTCTGACCCTAGCTTCTGGCTCTGGTGTGGTGACTaGTTTCTTCATCACACTGGC | + |
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Preference number: 2 (lower is better) Translates to: FIFDRALSNLLPSDPSFWLWCGD*FLHHTG Trigger: GCCAGTGTGATGAAGAAACCAGTCACCACACCAGAG...CCAGAAGCTAGGGTCAGAAGGGAGCAAGTTAGACAGGGCTCTGTCAAAGATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR CAA 90 bp | CTTCTTCATTGGTCTACACTAATGCCTCACAAAGGCAAACTTAGGTaGCAGCATTTCTGCCTGGTCCTCAGAGCACGTCCCAGGACTAAG | + |
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Preference number: 2 (lower is better) Translates to: LLHWSTLMPHKGKLR*QHFCLVLRARPRTK Trigger: CTTAGTCCTGGGACGTGCTCTGAGGACCAGGCAGAAATGCTGCAACCTAAGTTTGCCTTTGTGAGGCATTAGTGTAGACCAATGAAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR-3UTR GCA 90 bp | TGTCAGGGGACGTCTCATTTCTCACACTCAGCAGCTCTGGAACAAATGAACTGGAAGGCAAACTTAGGTTaGAGCATTTCTGCCTGGTCC | + |
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Preference number: 2 (lower is better) Translates to: CQGTSHFSHSAALEQMNWKANLG*SISAWS Trigger: GGACCAGGCAGAAATGCTGCAACCTAAGTTTGCCTT...CCAGTTCATTTGTTCCAGAGCTGCTGAGTGTGAGAAATGAGACGTCCCCTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR-3UTR GCA 90 bp | CTGCAGTGTAACAAACGCTCCCACAGTCACATGAAAGAAAAGCTGCCAGAGGTTCTGGTAAAGGCAGGCTaGTGTCCCAAGGAAAAATGC | + |
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Preference number: 2 (lower is better) Translates to: LQCNKRSHSHMKEKLPEVLVKAG*CPKEKC Trigger: GCATTTTTCCTTGGGACAGCAGCCTGCCTTTACCAG...AACCTCTGGCAGCTTTTCTTTCATGTGACTGTGGGAGCGTTTGTTACACTGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
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| 3UTR-3UTR TCA 90 bp | CTGCAGTGTAACAAACGCTCCCACAGTCACATGAAAGAAAAGCTGCCAGAGGTTAAGTCAGAAATGACTTaGCATTCCGCCAGCTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: LQCNKRSHSHMKEKLPEVKSEMT*HSASWC Trigger: ACACCAGCTGGCGGAATGTCAAGTCATTTCTGACTT...AACCTCTGGCAGCTTTTCTTTCATGTGACTGTGGGAGCGTTTGTTACACTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
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| 3UTR-3UTR GCA 90 bp | ACACTTAGTACAGTGGCTGTCTTAGATCGTAGCTTTCCAATTGCTGCAGCATCTAGGTTGCAGCATTTCTaGCTGGTCCTCAGAGCACGT | + |
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Preference number: 2 (lower is better) Translates to: TLSTVAVLDRSFPIAAASRLQHF*LVLRAR Trigger: ACGTGCTCTGAGGACCAGGCAGAAATGCTGCAACCT...AGATGCTGCAGCAATTGGAAAGCTACGATCTAAGACAGCCACTGTACTAAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR-3UTR CCA 90 bp | TGTCAGGGGACGTCTCATTTCTCACACTCAGCAGCTCTGGAACAAATGAACTGGAAAGCAGAGCTTCTCTaGTGTGGTGACTGGTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: CQGTSHFSHSAALEQMNWKAELL*CGDWFL Trigger: AAGAAACCAGTCACCACACCAGAGAAGCTCTGCTTT...CCAGTTCATTTGTTCCAGAGCTGCTGAGTGTGAGAAATGAGACGTCCCCTGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR-3UTR CCA 90 bp | GGGGACGTCTCATTTCTCACACTCAGCAGCTCTGGAACAAATGAACTGGTTCTGGTTTTCCATTATCCTTaGAGTATCCCACAGGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: GDVSFLTLSSSGTNELVLVFHYP*SIPQGS Trigger: AGAGCCCTGTGGGATACTCCAAGGATAATGGAAAAC...CAGAACCAGTTCATTTGTTCCAGAGCTGCTGAGTGTGAGAAATGAGACGTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR-3UTR TCA 90 bp | GCTGGCAAACTGATAACTCATTTTCCACTTGGAGTAGGGGCTCCTTTCTTTGTTGCTTCTCTGGTGTGGTaGCTGGTTTCTTCATCACAC | + |
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Preference number: 2 (lower is better) Translates to: AGKLITHFPLGVGAPFFVASLVW*LVSSSH Trigger: GTGTGATGAAGAAACCAGTCACCACACCAGAGAAGC...AACAAAGAAAGGAGCCCCTACTCCAAGTGGAAAATGAGTTATCAGTTTGCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR-3UTR CCA 90 bp | GGGGACGTCTCATTTCTCACACTCAGCAGCTCTGGAACAAATGAACTGGTTCTGCAGCATCTTCTTCATTaGTCTACACTAATGCCTCAC | + |
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Preference number: 2 (lower is better) Translates to: GDVSFLTLSSSGTNELVLQHLLH*STLMPH Trigger: GTGAGGCATTAGTGTAGACCAATGAAGAAGATGCTG...CAGAACCAGTTCATTTGTTCCAGAGCTGCTGAGTGTGAGAAATGAGACGTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR-3UTR TCA 90 bp | CATCTTCTTCATTGGTCTACACTAATGCCTCACAAAGGCAAACTTAGGTTGCAGTCTGAACTTCTGCTGTaGTGGCCTGACATTCCACTG | + |
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Preference number: 2 (lower is better) Translates to: HLLHWSTLMPHKGKLRLQSELLL*WPDIPL Trigger: CAGTGGAATGTCAGGCCATCACAGCAGAAGTTCAGA...CTGCAACCTAAGTTTGCCTTTGTGAGGCATTAGTGTAGACCAATGAAGAAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR-3UTR CCA 90 bp | GGGGACGTCTCATTTCTCACACTCAGCAGCTCTGGAACAAATGAACTGGTTCTGGTTTCTTCATCACACTaGCAGCAAATTTATGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: GDVSFLTLSSSGTNELVLVSSSH*QQIYVL Trigger: GAGGACATAAATTTGCTGCCAGTGTGATGAAGAAAC...CAGAACCAGTTCATTTGTTCCAGAGCTGCTGAGTGTGAGAAATGAGACGTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR-3UTR CCA 90 bp | GCTGGCAAACTGATAACTCATTTTCCACTTGGAGTAGGGGCTCCTTTCTTTGTTAACAAAACGGGAAGATaGGCAGAGAAAGAAAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: AGKLITHFPLGVGAPFFVNKTGR*AEKESR Trigger: TCTGCTTTCTTTCTCTGCCCATCTTCCCGTTTTGTT...AACAAAGAAAGGAGCCCCTACTCCAAGTGGAAAATGAGTTATCAGTTTGCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR-3UTR TCA 90 bp | GTTGTTCTTTCAGGGAAAAGACTCAGTATGAATACATTTCAAACCCAGACCAATAGTGCTGTGCCACCATaGAAAAGCCATTGCCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: VVLSGKRLSMNTFQTQTNSAVPP*KSHCLC Trigger: GCAAAGGCAATGGCTTTTTCATGGTGGCACAGCACT...ATTGGTCTGGGTTTGAAATGTATTCATACTGAGTCTTTTCCCTGAAAGAACAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR-3UTR CCA 90 bp | GTTGTTCTTTCAGGGAAAAGACTCAGTATGAATACATTTCAAACCCAGACCAATACAGGGCTCTCATTTTaGTGCCAGGCAACACCTTTC | + |
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Preference number: 2 (lower is better) Translates to: VVLSGKRLSMNTFQTQTNTGLSF*CQATPF Trigger: GAAAGGTGTTGCCTGGCACCAAAATGAGAGCCCTGT...ATTGGTCTGGGTTTGAAATGTATTCATACTGAGTCTTTTCCCTGAAAGAACAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR-3UTR CCA 90 bp | GTTGTTCTTTCAGGGAAAAGACTCAGTATGAATACATTTCAAACCCAGACCAATAACTCATTTTCCACTTaGAGTAGGGGCTCCTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: VVLSGKRLSMNTFQTQTNNSFST*SRGSFL Trigger: AAGAAAGGAGCCCCTACTCCAAGTGGAAAATGAGTT...ATTGGTCTGGGTTTGAAATGTATTCATACTGAGTCTTTTCCCTGAAAGAACAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR-3UTR CAA 90 bp | TCTGATTACTCCAGCACAGCCACACACACCTCACGAGGACCCCGAGGGAGCGAACACAGGGCTCTCATTTaGGTGCCAGGCAACACCTTT | + |
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Preference number: 3 (lower is better) Translates to: SDYSSTATHTSRGPRGSEHRALI*VPGNTF Trigger: AAAGGTGTTGCCTGGCACCAAAATGAGAGCCCTGTG...TTCGCTCCCTCGGGGTCCTCGTGAGGTGTGTGTGGCTGTGCTGGAGTAATCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR GCA 72 bp | TGTCAGACATCATGGTCAGGAGCCTTGCCTTGGGCTTaGCTCAGCCAGATCTGCAGTGTAACAAACGCTCCC | + |
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Preference number: 3 (lower is better) Translates to: CQTSWSGALPWA*LSQICSVTNAP Trigger: GGGAGCGTTTGTTACACTGCAGATCTGGCTGAGGCAAGCCCAAGGCAAGGCTCCTGACCATGATGTCTGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
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| 3UTR CCA 72 bp | GGGAGATGTCAGACATCATGGTCAGGAGCCTTGCCTTaGGCTTGCCTCAGCCAGATCTGCAGTGTAACAAAC | + |
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Preference number: 3 (lower is better) Translates to: GRCQTSWSGALP*ACLSQICSVTN Trigger: GTTTGTTACACTGCAGATCTGGCTGAGGCAAGCCCAAGGCAAGGCTCCTGACCATGATGTCTGACATCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
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| 3UTR-3UTR CAA 90 bp | TCTGATTACTCCAGCACAGCCACACACACCTCACGAGGACCCCGAGGGAGCGAAGCAGCATCTTCTTCATaGGTCTACACTAATGCCTCA | + |
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Preference number: 3 (lower is better) Translates to: SDYSSTATHTSRGPRGSEAASSS*VYTNAS Trigger: TGAGGCATTAGTGTAGACCAATGAAGAAGATGCTGC...TTCGCTCCCTCGGGGTCCTCGTGAGGTGTGTGTGGCTGTGCTGGAGTAATCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR-3UTR CAA 90 bp | TCTGATTACTCCAGCACAGCCACACACACCTCACGAGGACCCCGAGGGAGCGAACACGTTATCACTGTGTaGTCAGGACTTGTGATATTG | + |
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Preference number: 3 (lower is better) Translates to: SDYSSTATHTSRGPRGSEHVITV*SGLVIL Trigger: CAATATCACAAGTCCTGACAACACAGTGATAACGTG...TTCGCTCCCTCGGGGTCCTCGTGAGGTGTGTGTGGCTGTGCTGGAGTAATCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR-3UTR CAA 90 bp | TCTGATTACTCCAGCACAGCCACACACACCTCACGAGGACCCCGAGGGAGCGAAGAACTTAGCATTTCATaGTGTGCTGGCAAACTGATA | + |
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Preference number: 3 (lower is better) Translates to: SDYSSTATHTSRGPRGSEELSIS*CAGKLI Trigger: TATCAGTTTGCCAGCACACAATGAAATGCTAAGTTC...TTCGCTCCCTCGGGGTCCTCGTGAGGTGTGTGTGGCTGTGCTGGAGTAATCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR GCA 72 bp | TGCTGCCTGCCAGGTCTTCAGGTGATTCTGAACTTCTaGTGTGATGGCCTGACATTCCACTGTAGGAAGGAT | + |
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Preference number: 3 (lower is better) Translates to: CCLPGLQVILNF*CDGLTFHCRKD Trigger: ATCCTTCCTACAGTGGAATGTCAGGCCATCACAGCAGAAGTTCAGAATCACCTGAAGACCTGGCAGGCAGCA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR CCA 72 bp | CTCACAAAGGCAAACTTAGGTTGCAGCATTTCTGCCTaGTCCTCAGAGCACGTCCCAGGACTAAGCTTTGCT | + |
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Preference number: 3 (lower is better) Translates to: LTKANLGCSISA*SSEHVPGLSFA Trigger: AGCAAAGCTTAGTCCTGGGACGTGCTCTGAGGACCAGGCAGAAATGCTGCAACCTAAGTTTGCCTTTGTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR GCA 72 bp | GAATGTGTTTCATCTTTGACAGAGCCCTGTCTAACTTaGTCCCTTCTGACCCTAGCTTCTGGACACCGACTC | + |
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Preference number: 3 (lower is better) Translates to: ECVSSLTEPCLT*SLLTLASGHRL Trigger: GAGTCGGTGTCCAGAAGCTAGGGTCAGAAGGGAGCAAGTTAGACAGGGCTCTGTCAAAGATGAAACACATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR TCA 72 bp | CTTGGGTCTAGAGCCCTGGTGGGTATCAGTACCTTGTaGGAACTTAGCATTTCATTGTGTGCTGGCAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: LGSRALVGISTL*ELSISLCAGKL Trigger: CAGTTTGCCAGCACACAATGAAATGCTAAGTTCTCACAAGGTACTGATACCCACCAGGGCTCTAGACCCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
||
| 3UTR GCA 72 bp | CTCCCACAGTCACATGAAAGAAAAGCTGCCAGAGGTTaGGCAGTTCGTAGAGATACATGTTGCACAGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: LPQSHERKAARG*AVRRDTCCTDR Trigger: TCTGTCTGTGCAACATGTATCTCTACGAACTGCGCAACCTCTGGCAGCTTTTCTTTCATGTGACTGTGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
||
| 3UTR CCA 72 bp | TCCAGGTATCTTCCACTTTTGCAAGTGTCCACACAATaGGTTAGAGAGATGAGGCAGTTCAGTGACTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SRYLPLLQVSTQ*VREMRQFSDSS Trigger: GGAGGAGTCACTGAACTGCCTCATCTCTCTAACCCATTGTGTGGACACTTGCAAAAGTGGAAGATACCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
||
| 3UTR-3UTR CAA 90 bp | CTGCAGTGTAACAAACGCTCCCACAGTCACATGAAAGAAAAGCTGCCAGAGGTTAAAGTCAGAAATGACTaGACATTCCGCCAGCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LQCNKRSHSHMKEKLPEVKVRND*TFRQLV Trigger: CACCAGCTGGCGGAATGTCAAGTCATTTCTGACTTT...AACCTCTGGCAGCTTTTCTTTCATGTGACTGTGGGAGCGTTTGTTACACTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
||
| 3UTR TCA 72 bp | CATTTTGGTGCCAGGCAACACCTTTCACTATTACAATaGATGTGCTACTTGGGTCTAGAGCCCTGGTGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: HFGARQHLSLLQ*MCYLGLEPWWV Trigger: TACCCACCAGGGCTCTAGACCCAAGTAGCACATTCATTGTAATAGTGAAAGGTGTTGCCTGGCACCAAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
||
| 3UTR GCA 72 bp | GCTGCCAGAGGTTGCGCAGTTCGTAGAGATACATGTTaGACAGACAGATTAAGCCGAAAGTCAGAAATGACT | + |
|
Preference number: 3 (lower is better) Translates to: AARGCAVRRDTC*TDRLSRKSEMT Trigger: AGTCATTTCTGACTTTCGGCTTAATCTGTCTGTGCAACATGTATCTCTACGAACTGCGCAACCTCTGGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
||
| 3UTR GCA 72 bp | TTATCCTTGGAGTATCCCACAGGGCTCTCATTTTGGTaGCAGGCAACACCTTTCACTATTACAATGAATGTG | + |
|
Preference number: 3 (lower is better) Translates to: LSLEYPTGLSFW*QATPFTITMNV Trigger: CACATTCATTGTAATAGTGAAAGGTGTTGCCTGGCACCAAAATGAGAGCCCTGTGGGATACTCCAAGGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
||
| 3UTR CCA 72 bp | CACTTACTGCCTACCTTCTACCTTATTTTTCTAAGATaGAGGGGCAGTGAAGGTTCCAGGTATCTTCCACTT | + |
|
Preference number: 3 (lower is better) Translates to: HLLPTFYLIFLR*RGSEGSRYLPL Trigger: AAGTGGAAGATACCTGGAACCTTCACTGCCCCTCCATCTTAGAAAAATAAGGTAGAAGGTAGGCAGTAAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
||
| 3UTR TCA 72 bp | TGCACAGACAGATTAAGCCGAAAGTCAGAAATGACTTaGCATTCCGCCAGCTGGTGTAGTACACAAGTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: CTDRLSRKSEMT*HSASWCSTQVN Trigger: ATTTACTTGTGTACTACACCAGCTGGCGGAATGTCAAGTCATTTCTGACTTTCGGCTTAATCTGTCTGTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
||
| 3UTR CCA 72 bp | ATCGTAGCTTTCCAATTGCTGCAGCATCTTCTTCATTaGTCTACACTAATGCCTCACAAAGGCAAACTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: IVAFQLLQHLLH*STLMPHKGKLR Trigger: CCTAAGTTTGCCTTTGTGAGGCATTAGTGTAGACCAATGAAGAAGATGCTGCAGCAATTGGAAAGCTACGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
||
| 3UTR TCA 72 bp | AAAGAAAACACGTTATCACTGTGTTGTCAGGACTTGTaGTATTGTAGAGATGTACATCACAGCCCTCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: KENTLSLCCQDL*YCRDVHHSPLP Trigger: TGGGAGAGGGCTGTGATGTACATCTCTACAATATCACAAGTCCTGACAACACAGTGATAACGTGTTTTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
||
| 3UTR TCA 72 bp | AAGGGACTACATACCAAGGCCCATTGTTTTGAGGGATaGTATAAAGTTACCAGAATCCTATGCAGTCCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: KGLHTKAHCFEG*YKVTRILCSPC Trigger: ACAAGGACTGCATAGGATTCTGGTAACTTTATATCATCCCTCAAAACAATGGGCCTTGGTATGTAGTCCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
||
| 3UTR CAA 72 bp | TCCGAAGGGAGATGTCAGACATCATGGTCAGGAGCCTaGCCTTGGGCTTGCCTCAGCCAGATCTGCAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SEGRCQTSWSGA*PWACLSQICSV Trigger: TACACTGCAGATCTGGCTGAGGCAAGCCCAAGGCAAGGCTCCTGACCATGATGTCTGACATCTCCCTTCGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
||
| CDS-3UTR CCA 90 bp | TCTGATTACTCCAGCACAGCCACACACACCTCACGAGGACCCCGAGGGAGCGAATCTGCTCATAATCAGTaGATGCAGACAGCGGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SDYSSTATHTSRGPRGSESAHNQ*MQTAVV Trigger: GACTACCGCTGTCTGCATCCACTGATTATGAGCAGA...TTCGCTCCCTCGGGGTCCTCGTGAGGTGTGTGTGGCTGTGCTGGAGTAATCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
||
| 3UTR CAA 72 bp | ATGTCAGACATCATGGTCAGGAGCCTTGCCTTGGGCTaGCCTCAGCCAGATCTGCAGTGTAACAAACGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: MSDIMVRSLALG*PQPDLQCNKRS Trigger: GGAGCGTTTGTTACACTGCAGATCTGGCTGAGGCAAGCCCAAGGCAAGGCTCCTGACCATGATGTCTGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
||
| CDS-3UTR TCA 90 bp | TCTGATTACTCCAGCACAGCCACACACACCTCACGAGGACCCCGAGGGAGCGAACATCTATCAGGAAATTaGGCAAGTTTCCTGGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SDYSSTATHTSRGPRGSEHLSGN*ASFLDS Trigger: GCTGTCCAGGAAACTTGCTCAATTTCCTGATAGATG...TTCGCTCCCTCGGGGTCCTCGTGAGGTGTGTGTGGCTGTGCTGGAGTAATCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
||
| CDS-3UTR TCA 90 bp | TCTGATTACTCCAGCACAGCCACACACACCTCACGAGGACCCCGAGGGAGCGAAGTAATGAACTCCTTCTaGAGCTCATCCAGGAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SDYSSTATHTSRGPRGSEVMNSF*SSSRKE Trigger: CTCTTTCCTGGATGAGCTTCAGAAGGAGTTCATTAC...TTCGCTCCCTCGGGGTCCTCGTGAGGTGTGTGTGGCTGTGCTGGAGTAATCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
||
| CDS-3UTR GCA 90 bp | CAGACATCATGGTCAGGAGCCTTGCCTTGGGCTTGCCTCAGCCAGATCTGCAGTTACTTTCTGCACTCCTaGATTCCTGTGCTCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QTSWSGALPWACLSQICSYFLHS*IPVLCS Trigger: TGAGCAGAGCACAGGAATGCAGGAGTGCAGAAAGTA...ACTGCAGATCTGGCTGAGGCAAGCCCAAGGCAAGGCTCCTGACCATGATGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
||
| 3UTR CAA 72 bp | AGGGAGATGTCAGACATCATGGTCAGGAGCCTTGCCTaGGGCTTGCCTCAGCCAGATCTGCAGTGTAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: REMSDIMVRSLA*GLPQPDLQCNK Trigger: TTTGTTACACTGCAGATCTGGCTGAGGCAAGCCCAAGGCAAGGCTCCTGACCATGATGTCTGACATCTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
||
| CDS-3UTR TCA 90 bp | GACATCATGGTCAGGAGCCTTGCCTTGGGCTTGCCTCAGCCAGATCTGCAGTGTCAGAAAATGCAGATGTaGCTCCATTTGCTGATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DIMVRSLALGLPQPDLQCQKMQM*LHLLIP Trigger: TGGGATCAGCAAATGGAGTCACATCTGCATTTTCTG...ACACTGCAGATCTGGCTGAGGCAAGCCCAAGGCAAGGCTCCTGACCATGATGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
||
| CDS-3UTR TCA 90 bp | TGTCAGGGGACGTCTCATTTCTCACACTCAGCAGCTCTGGAACAAATGAACTGGGCTCCCACAGTCACATaGAAGAAAAGCTGCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CQGTSHFSHSAALEQMNWAPTVT*KKSCQR Trigger: CCTCTGGCAGCTTTTCTTTCATGTGACTGTGGGAGC...CCAGTTCATTTGTTCCAGAGCTGCTGAGTGTGAGAAATGAGACGTCCCCTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
||
| CDS-3UTR GCA 90 bp | TTGTGTGCTGGCAAACTGATAACTCATTTTCCACTTGGAGTAGGGGCTCCTTTCGCCTTGCCTTGGGCTTaGCTCAGCCAGATCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LCAGKLITHFPLGVGAPFALPWA*LSQICS Trigger: ACTGCAGATCTGGCTGAGGCAAGCCCAAGGCAAGGC...GAAAGGAGCCCCTACTCCAAGTGGAAAATGAGTTATCAGTTTGCCAGCACACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
||
| CDS-3UTR GCA 90 bp | ACACTTAGTACAGTGGCTGTCTTAGATCGTAGCTTTCCAATTGCTGCAGCATCTCATGGTCAGGAGCCTTaGCTTGGGCTTGCCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLSTVAVLDRSFPIAAASHGQEP*LGLASA Trigger: GGCTGAGGCAAGCCCAAGGCAAGGCTCCTGACCATG...AGATGCTGCAGCAATTGGAAAGCTACGATCTAAGACAGCCACTGTACTAAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
||
| CDS-3UTR CCA 90 bp | GCAAATCATCCGAAGGGAGATGTCAGACATCATGGTCAGGAGCCTTGCCTTGGGTCCCAGTTCACACATTaGGATTTGATAAGGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ANHPKGDVRHHGQEPCLGSQFTH*DLIRGP Trigger: AGGCCCCCTTATCAAATCCCAATGTGTGAACTGGGA...CCCAAGGCAAGGCTCCTGACCATGATGTCTGACATCTCCCTTCGGATGATTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
||
| 3UTR CAA 72 bp | TGGTCTACACTAATGCCTCACAAAGGCAAACTTAGGTaGCAGCATTTCTGCCTGGTCCTCAGAGCACGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: WSTLMPHKGKLR*QHFCLVLRARP Trigger: GGGACGTGCTCTGAGGACCAGGCAGAAATGCTGCAACCTAAGTTTGCCTTTGTGAGGCATTAGTGTAGACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
||
| CDS-3UTR TCA 90 bp | GCAAATCATCCGAAGGGAGATGTCAGACATCATGGTCAGGAGCCTTGCCTTGGGCCTCACACGAATGACTaGGGCAGACAAAATCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: ANHPKGDVRHHGQEPCLGPHTND*GRQNHR Trigger: TCTATGATTTTGTCTGCCTCAGTCATTCGTGTGAGG...CCCAAGGCAAGGCTCCTGACCATGATGTCTGACATCTCCCTTCGGATGATTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
||
| 3UTR CAA 72 bp | GGAATGTGTTTCATCTTTGACAGAGCCCTGTCTAACTaGCTCCCTTCTGACCCTAGCTTCTGGACACCGACT | + |
|
Preference number: 4 (lower is better) Translates to: GMCFIFDRALSN*LPSDPSFWTPT Trigger: AGTCGGTGTCCAGAAGCTAGGGTCAGAAGGGAGCAAGTTAGACAGGGCTCTGTCAAAGATGAAACACATTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
||
| CDS-3UTR TCA 90 bp | CAAACGCTCCCACAGTCACATGAAAGAAAAGCTGCCAGAGGTTGCGCAGTTCGTCATCTATCAGGAAATTaGGCAAGTTTCCTGGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: QTLPQSHERKAARGCAVRHLSGN*ASFLDS Trigger: GCTGTCCAGGAAACTTGCTCAATTTCCTGATAGATG...ACGAACTGCGCAACCTCTGGCAGCTTTTCTTTCATGTGACTGTGGGAGCGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
||
| CDS-3UTR TCA 90 bp | TGTCAGGGGACGTCTCATTTCTCACACTCAGCAGCTCTGGAACAAATGAACTGGTGTGACTCCATTTGCTaGTCCCAGTTCACACATTGG | + |
|
Preference number: 4 (lower is better) Translates to: CQGTSHFSHSAALEQMNWCDSIC*SQFTHW Trigger: CCAATGTGTGAACTGGGATCAGCAAATGGAGTCACA...CCAGTTCATTTGTTCCAGAGCTGCTGAGTGTGAGAAATGAGACGTCCCCTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
||
| CDS-3UTR GCA 90 bp | GGGGACGTCTCATTTCTCACACTCAGCAGCTCTGGAACAAATGAACTGGTTCTGTACTTTCTGCACTCCTaGATTCCTGTGCTCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GDVSFLTLSSSGTNELVLYFLHS*IPVLCS Trigger: TGAGCAGAGCACAGGAATGCAGGAGTGCAGAAAGTA...CAGAACCAGTTCATTTGTTCCAGAGCTGCTGAGTGTGAGAAATGAGACGTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
||
| CDS-3UTR GCA 90 bp | TTGTGTGCTGGCAAACTGATAACTCATTTTCCACTTGGAGTAGGGGCTCCTTTCTGCCTCAGCCAGATCTaGAGTGTAACAAACGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LCAGKLITHFPLGVGAPFCLSQI*SVTNAP Trigger: GGGAGCGTTTGTTACACTGCAGATCTGGCTGAGGCA...GAAAGGAGCCCCTACTCCAAGTGGAAAATGAGTTATCAGTTTGCCAGCACACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
||
| CDS-3UTR CCA 90 bp | AACAAACGCTCCCACAGTCACATGAAAGAAAAGCTGCCAGAGGTTGCGCAGTTCTCTGCTCATAATCAGTaGATGCAGACAGCGGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: NKRSHSHMKEKLPEVAQFSAHNQ*MQTAVV Trigger: GACTACCGCTGTCTGCATCCACTGATTATGAGCAGA...GAACTGCGCAACCTCTGGCAGCTTTTCTTTCATGTGACTGTGGGAGCGTTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
||
| CDS-3UTR CCA 90 bp | CATCTTCTTCATTGGTCTACACTAATGCCTCACAAAGGCAAACTTAGGTTGCAGTCAGGAGCCTTGCCTTaGGCTTGCCTCAGCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: HLLHWSTLMPHKGKLRLQSGALP*ACLSQI Trigger: GATCTGGCTGAGGCAAGCCCAAGGCAAGGCTCCTGA...CTGCAACCTAAGTTTGCCTTTGTGAGGCATTAGTGTAGACCAATGAAGAAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
||
| 3UTR CAA 72 bp | TCGCTCGGGGCTGCTCTCAGAAGGTACGTGACAACTTaGTTAGCAGCTTTGTTACCACAGAAATCTAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: SLGAALRRYVTT*LAALLPQKSRQ Trigger: CTGTCTAGATTTCTGTGGTAACAAAGCTGCTAACAAAGTTGTCACGTACCTTCTGAGAGCAGCCCCGAGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
||
| CDS-3UTR GCA 90 bp | CTGCAGTGTAACAAACGCTCCCACAGTCACATGAAAGAAAAGCTGCCAGAGGTTACTCCTGCATTCCTGTaGTCTGCTCATAATCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQCNKRSHSHMKEKLPEVTPAFL*SAHNQW Trigger: CCACTGATTATGAGCAGAGCACAGGAATGCAGGAGT...AACCTCTGGCAGCTTTTCTTTCATGTGACTGTGGGAGCGTTTGTTACACTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
||
| CDS-3UTR GCA 90 bp | GCAAATCATCCGAAGGGAGATGTCAGACATCATGGTCAGGAGCCTTGCCTTGGGACAGTCAACAGAAAATaGAGATGTGACTCCATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ANHPKGDVRHHGQEPCLGTVNRK*RCDSIC Trigger: GCAAATGGAGTCACATCTGCATTTTCTGTTGACTGT...CCCAAGGCAAGGCTCCTGACCATGATGTCTGACATCTCCCTTCGGATGATTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
||
| CDS-3UTR TCA 90 bp | GGGGACGTCTCATTTCTCACACTCAGCAGCTCTGGAACAAATGAACTGGTTCTGCGCTGCTTGGTCCTCTaGATGAAGTTATCAAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: GDVSFLTLSSSGTNELVLRCLVL*MKLSNS Trigger: TGAATTTGATAACTTCATTCAGAGGACCAAGCAGCG...CAGAACCAGTTCATTTGTTCCAGAGCTGCTGAGTGTGAGAAATGAGACGTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
||
| CDS-3UTR TCA 90 bp | TTGTGTGCTGGCAAACTGATAACTCATTTTCCACTTGGAGTAGGGGCTCCTTTCGCTGGTTCTAGTCGCTaGTGGGCAGAAGAAATCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LCAGKLITHFPLGVGAPFAGSSR*WAEEIL Trigger: TAAGATTTCTTCTGCCCATCAGCGACTAGAACCAGC...GAAAGGAGCCCCTACTCCAAGTGGAAAATGAGTTATCAGTTTGCCAGCACACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
||
| CDS-3UTR CCA 90 bp | TTGTGTGCTGGCAAACTGATAACTCATTTTCCACTTGGAGTAGGGGCTCCTTTCTCCCAGTTCACACATTaGGATTTGATAAGGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LCAGKLITHFPLGVGAPFSQFTH*DLIRGP Trigger: AGGCCCCCTTATCAAATCCCAATGTGTGAACTGGGA...GAAAGGAGCCCCTACTCCAAGTGGAAAATGAGTTATCAGTTTGCCAGCACACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
||
| 3UTR CAA 72 bp | AACCAGTGCTGTGCCACCATGAAAAAGCCATTGCCTTaGCAGTTTTCCATTATCCTTGGAGTATCCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: NQCCATMKKPLP*QFSIILGVSHR Trigger: CCTGTGGGATACTCCAAGGATAATGGAAAACTGCAAAGGCAATGGCTTTTTCATGGTGGCACAGCACTGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
||
| CDS-3UTR TCA 90 bp | ATGTTGCACAGACAGATTAAGCCGAAAGTCAGAAATGACTTGACATTCCGCCAGTGTGACTCCATTTGCTaGTCCCAGTTCACACATTGG | + |
|
Preference number: 4 (lower is better) Translates to: MLHRQIKPKVRNDLTFRQCDSIC*SQFTHW Trigger: CCAATGTGTGAACTGGGATCAGCAAATGGAGTCACA...CTGGCGGAATGTCAAGTCATTTCTGACTTTCGGCTTAATCTGTCTGTGCAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
||
| CDS-3UTR TCA 90 bp | TTCATCTTTGACAGAGCCCTGTCTAACTTGCTCCCTTCTGACCCTAGCTTCTGGAGGCTTTCTATGGCATaGAAGCCTCGAATTAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: FIFDRALSNLLPSDPSFWRLSMA*KPRIKF Trigger: GAATTTAATTCGAGGCTTTCATGCCATAGAAAGCCT...CCAGAAGCTAGGGTCAGAAGGGAGCAAGTTAGACAGGGCTCTGTCAAAGATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
||
| CDS-3UTR TCA 90 bp | ATTTCATTGTGTGCTGGCAAACTGATAACTCATTTTCCACTTGGAGTAGGGGCTGCCGAAAGTCAGAAATaGCTTGACATTCCGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ISLCAGKLITHFPLGVGAAESQK*LDIPPA Trigger: AGCTGGCGGAATGTCAAGTCATTTCTGACTTTCGGC...AGCCCCTACTCCAAGTGGAAAATGAGTTATCAGTTTGCCAGCACACAATGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
||
| CDS-3UTR GCA 90 bp | GCTGGCAAACTGATAACTCATTTTCCACTTGGAGTAGGGGCTCCTTTCTTTGTTACTCCTGCATTCCTGTaGTCTGCTCATAATCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGKLITHFPLGVGAPFFVTPAFL*SAHNQW Trigger: CCACTGATTATGAGCAGAGCACAGGAATGCAGGAGT...AACAAAGAAAGGAGCCCCTACTCCAAGTGGAAAATGAGTTATCAGTTTGCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
||
| CDS-3UTR GCA 90 bp | TGTCAGGGGACGTCTCATTTCTCACACTCAGCAGCTCTGGAACAAATGAACTGGACAGTCAACAGAAAATaGAGATGTGACTCCATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CQGTSHFSHSAALEQMNWTVNRK*RCDSIC Trigger: GCAAATGGAGTCACATCTGCATTTTCTGTTGACTGT...CCAGTTCATTTGTTCCAGAGCTGCTGAGTGTGAGAAATGAGACGTCCCCTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
||
| CDS-3UTR GCA 90 bp | CATCTTCTTCATTGGTCTACACTAATGCCTCACAAAGGCAAACTTAGGTTGCAGCTGGTAAAGGCAGGCTaGTGTCCCAAGGAAAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: HLLHWSTLMPHKGKLRLQLVKAG*CPKEKC Trigger: GCATTTTTCCTTGGGACAGCAGCCTGCCTTTACCAG...CTGCAACCTAAGTTTGCCTTTGTGAGGCATTAGTGTAGACCAATGAAGAAGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
||
| CDS-3UTR GCA 90 bp | ACACTTAGTACAGTGGCTGTCTTAGATCGTAGCTTTCCAATTGCTGCAGCATCTAAAGCTGCCAGAGGTTaGGCAGTTCGTAGAGATACA | + |
|
Preference number: 4 (lower is better) Translates to: TLSTVAVLDRSFPIAAASKAARG*AVRRDT Trigger: TGTATCTCTACGAACTGCGCAACCTCTGGCAGCTTT...AGATGCTGCAGCAATTGGAAAGCTACGATCTAAGACAGCCACTGTACTAAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
||
| 3UTR CAA 72 bp | CAGTACAAGAGACCTTATCTGGAATGTGTTTCATCTTaGACAGAGCCCTGTCTAACTTGCTCCCTTCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: QYKRPYLECVSS*TEPCLTCSLLT Trigger: GGTCAGAAGGGAGCAAGTTAGACAGGGCTCTGTCAAAGATGAAACACATTCCAGATAAGGTCTCTTGTACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| CDS-3UTR TCA 90 bp | ATTTCATTGTGTGCTGGCAAACTGATAACTCATTTTCCACTTGGAGTAGGGGCTAAGTCAGAAATGACTTaGCATTCCGCCAGCTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: ISLCAGKLITHFPLGVGAKSEMT*HSASWC Trigger: ACACCAGCTGGCGGAATGTCAAGTCATTTCTGACTT...AGCCCCTACTCCAAGTGGAAAATGAGTTATCAGTTTGCCAGCACACAATGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| CDS-3UTR CCA 90 bp | CAAACGCTCCCACAGTCACATGAAAGAAAAGCTGCCAGAGGTTGCGCAGTTCGTTTCAATGAAACAGTATaGTCTGACAGCAGTATTTGT | + |
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Preference number: 4 (lower is better) Translates to: QTLPQSHERKAARGCAVRFNETV*SDSSIC Trigger: ACAAATACTGCTGTCAGACCATACTGTTTCATTGAA...ACGAACTGCGCAACCTCTGGCAGCTTTTCTTTCATGTGACTGTGGGAGCGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
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| CDS-3UTR TCA 90 bp | ATGTTGCACAGACAGATTAAGCCGAAAGTCAGAAATGACTTGACATTCCGCCAGCGCTGCTTGGTCCTCTaGATGAAGTTATCAAATTCA | + |
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Preference number: 4 (lower is better) Translates to: MLHRQIKPKVRNDLTFRQRCLVL*MKLSNS Trigger: TGAATTTGATAACTTCATTCAGAGGACCAAGCAGCG...CTGGCGGAATGTCAAGTCATTTCTGACTTTCGGCTTAATCTGTCTGTGCAACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
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| CDS-3UTR TCA 90 bp | CATCTTCTTCATTGGTCTACACTAATGCCTCACAAAGGCAAACTTAGGTTGCAGCAGAAAATGCAGATGTaGCTCCATTTGCTGATCCCA | + |
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Preference number: 4 (lower is better) Translates to: HLLHWSTLMPHKGKLRLQQKMQM*LHLLIP Trigger: TGGGATCAGCAAATGGAGTCACATCTGCATTTTCTG...CTGCAACCTAAGTTTGCCTTTGTGAGGCATTAGTGTAGACCAATGAAGAAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR CAA 72 bp | ATAACTAACCAGTGCTGTGCCACCATGAAAAAGCCATaGCCTTTGCAGTTTTCCATTATCCTTGGAGTATCC | + |
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Preference number: 4 (lower is better) Translates to: ITNQCCATMKKP*PLQFSIILGVS Trigger: GGATACTCCAAGGATAATGGAAAACTGCAAAGGCAATGGCTTTTTCATGGTGGCACAGCACTGGTTAGTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR CAA 72 bp | GCTCTCAGAAGGTACGTGACAACTTTGTTAGCAGCTTaGTTACCACAGAAATCTAGACAGACTTGGAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: ALRRYVTTLLAA*LPQKSRQTWSL Trigger: CAAACTCCAAGTCTGTCTAGATTTCTGTGGTAACAAAGCTGCTAACAAAGTTGTCACGTACCTTCTGAGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| CDS-3UTR GCA 90 bp | CTGCAGTGTAACAAACGCTCCCACAGTCACATGAAAGAAAAGCTGCCAGAGGTTAGCTTGATTTCCATCTaGATGTCAGACAGATTTATT | + |
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Preference number: 4 (lower is better) Translates to: LQCNKRSHSHMKEKLPEVSLISI*MSDRFI Trigger: AATAAATCTGTCTGACATGCAGATGGAAATCAAGCT...AACCTCTGGCAGCTTTTCTTTCATGTGACTGTGGGAGCGTTTGTTACACTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
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| CDS-3UTR GCA 90 bp | GTTGTTCTTTCAGGGAAAAGACTCAGTATGAATACATTTCAAACCCAGACCAATTCCTCACCATCACTCTaGAGGAGGCTTTCTATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VVLSGKRLSMNTFQTQTNSSPSL*RRLSMA Trigger: TGCCATAGAAAGCCTCCTGCAGAGTGATGGTGAGGA...ATTGGTCTGGGTTTGAAATGTATTCATACTGAGTCTTTTCCCTGAAAGAACAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| CDS-3UTR GCA 90 bp | ATTTCATTGTGTGCTGGCAAACTGATAACTCATTTTCCACTTGGAGTAGGGGCTCGTAGAGATACATGTTaGACAGACAGATTAAGCCGA | + |
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Preference number: 4 (lower is better) Translates to: ISLCAGKLITHFPLGVGARRDTC*TDRLSR Trigger: TCGGCTTAATCTGTCTGTGCAACATGTATCTCTACG...AGCCCCTACTCCAAGTGGAAAATGAGTTATCAGTTTGCCAGCACACAATGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| CDS-3UTR GCA 90 bp | ACACTTAGTACAGTGGCTGTCTTAGATCGTAGCTTTCCAATTGCTGCAGCATCTTTGGATAATTCTCACTaGACAACATCATGTAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: TLSTVAVLDRSFPIAAASLDNSH*TTSCSS Trigger: TGAGCTACATGATGTTGTGCAGTGAGAATTATCCAA...AGATGCTGCAGCAATTGGAAAGCTACGATCTAAGACAGCCACTGTACTAAGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| CDS-3UTR GCA 90 bp | AGAGAAAGAAAGCAGAGCTTCTCTGGTGTGGTGACTGGTTTCTTCATCACACTGAGCTTGATTTCCATCTaGATGTCAGACAGATTTATT | + |
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Preference number: 4 (lower is better) Translates to: RERKQSFSGVVTGFFITLSLISI*MSDRFI Trigger: AATAAATCTGTCTGACATGCAGATGGAAATCAAGCT...CAGTGTGATGAAGAAACCAGTCACCACACCAGAGAAGCTCTGCTTTCTTTCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| CDS-3UTR CCA 90 bp | TTGTGTGCTGGCAAACTGATAACTCATTTTCCACTTGGAGTAGGGGCTCCTTTCTTCAATGAAACAGTATaGTCTGACAGCAGTATTTGT | + |
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Preference number: 4 (lower is better) Translates to: LCAGKLITHFPLGVGAPFFNETV*SDSSIC Trigger: ACAAATACTGCTGTCAGACCATACTGTTTCATTGAA...GAAAGGAGCCCCTACTCCAAGTGGAAAATGAGTTATCAGTTTGCCAGCACACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| CDS-3UTR TCA 90 bp | GTTGTTCTTTCAGGGAAAAGACTCAGTATGAATACATTTCAAACCCAGACCAATCCTCACACGAATGACTaGGGCAGACAAAATCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: VVLSGKRLSMNTFQTQTNPHTND*GRQNHR Trigger: TCTATGATTTTGTCTGCCTCAGTCATTCGTGTGAGG...ATTGGTCTGGGTTTGAAATGTATTCATACTGAGTCTTTTCCCTGAAAGAACAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| CDS-3UTR CCA 90 bp | ATTTCATTGTGTGCTGGCAAACTGATAACTCATTTTCCACTTGGAGTAGGGGCTTTGTTGAAAGAGACCTaGGATTATTATATCGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ISLCAGKLITHFPLGVGALLKET*DYYIAA Trigger: AGCAGCGATATAATAATCCCAGGTCTCTTTCAACAA...AGCCCCTACTCCAAGTGGAAAATGAGTTATCAGTTTGCCAGCACACAATGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| CDS-3UTR CCA 90 bp | GTTGTTCTTTCAGGGAAAAGACTCAGTATGAATACATTTCAAACCCAGACCAATGCAGGAGGCTTTCTATaGCATGAAAGCCTCGAATTA | + |
|
Preference number: 4 (lower is better) Translates to: VVLSGKRLSMNTFQTQTNAGGFL*HESLEL Trigger: TAATTCGAGGCTTTCATGCCATAGAAAGCCTCCTGC...ATTGGTCTGGGTTTGAAATGTATTCATACTGAGTCTTTTCCCTGAAAGAACAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR CAA 72 bp | AGGCAAATCATTCATGATGGCTCCAAACCAGTAGACTaGTACATTTTTGCAAATAGAATCAAGCTGTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RQIIHDGSKPVD*YIFANRIKLCF Trigger: GAAGCACAGCTTGATTCTATTTGCAAAAATGTACAAGTCTACTGGTTTGGAGCCATCATGAATGATTTGCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| 3UTR CAA 72 bp | AAAGCCACAATTAATCAGAAAGCCCACATTTCCTGGTaGATTAACTATCATGAGGAATCTCTTCTGCTCTAC | + |
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Preference number: 4 (lower is better) Translates to: KATINQKAHISW*INYHEESLLLY Trigger: GTAGAGCAGAAGAGATTCCTCATGATAGTTAATCAACCAGGAAATGTGGGCTTTCTGATTAATTGTGGCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| CDS-3UTR CAA 90 bp | TGTCAGGGGACGTCTCATTTCTCACACTCAGCAGCTCTGGAACAAATGAACTGGAGCCTTGCCTTGGGCTaGCCTCAGCCAGATCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: CQGTSHFSHSAALEQMNWSLALG*PQPDLQ Trigger: CTGCAGATCTGGCTGAGGCAAGCCCAAGGCAAGGCT...CCAGTTCATTTGTTCCAGAGCTGCTGAGTGTGAGAAATGAGACGTCCCCTGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| CDS-3UTR CAA 90 bp | GCCTTGCCTTGGGCTTGCCTCAGCCAGATCTGCAGTGTAACAAACGCTCCCACATTCACACATTGGGATTaGATAAGGGGGCCTCAGCTT | + |
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Preference number: 5 (lower is better) Translates to: ALPWACLSQICSVTNAPTFTHWD*IRGPQL Trigger: AAGCTGAGGCCCCCTTATCAAATCCCAATGTGTGAA...TGTGGGAGCGTTTGTTACACTGCAGATCTGGCTGAGGCAAGCCCAAGGCAAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
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| CDS-3UTR CAA 90 bp | TCATGGTCAGGAGCCTTGCCTTGGGCTTGCCTCAGCCAGATCTGCAGTGTAACAAGAAGGCGAGAACATTaGGATAATTCTCACTGCACA | + |
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Preference number: 5 (lower is better) Translates to: SWSGALPWACLSQICSVTRRREH*DNSHCT Trigger: TGTGCAGTGAGAATTATCCAAATGTTCTCGCCTTCT...TGTTACACTGCAGATCTGGCTGAGGCAAGCCCAAGGCAAGGCTCCTGACCATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154064.3 |
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| CDS-3UTR CAA 90 bp | TTCATCTTTGACAGAGCCCTGTCTAACTTGCTCCCTTCTGACCCTAGCTTCTGGCAATCCCTGACAGAGTaGCTGGTTCTAGTCGCTGAT | + |
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Preference number: 5 (lower is better) Translates to: FIFDRALSNLLPSDPSFWQSLTE*LVLVAD Trigger: ATCAGCGACTAGAACCAGCAACTCTGTCAGGGATTG...CCAGAAGCTAGGGTCAGAAGGGAGCAAGTTAGACAGGGCTCTGTCAAAGATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| CDS-3UTR CAA 90 bp | CATCTTCTTCATTGGTCTACACTAATGCCTCACAAAGGCAAACTTAGGTTGCAGGTCAGGAGCCTTGCCTaGGGCTTGCCTCAGCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: HLLHWSTLMPHKGKLRLQVRSLA*GLPQPD Trigger: ATCTGGCTGAGGCAAGCCCAAGGCAAGGCTCCTGAC...CTGCAACCTAAGTTTGCCTTTGTGAGGCATTAGTGTAGACCAATGAAGAAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| CDS-3UTR CAA 90 bp | CATCTTCTTCATTGGTCTACACTAATGCCTCACAAAGGCAAACTTAGGTTGCAGTCATGGTCAGGAGCCTaGCCTTGGGCTTGCCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HLLHWSTLMPHKGKLRLQSWSGA*PWACLS Trigger: GCTGAGGCAAGCCCAAGGCAAGGCTCCTGACCATGA...CTGCAACCTAAGTTTGCCTTTGTGAGGCATTAGTGTAGACCAATGAAGAAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| CDS-3UTR CAA 90 bp | GGGGACGTCTCATTTCTCACACTCAGCAGCTCTGGAACAAATGAACTGGTTCTGAAAGTCAGAAATGACTaGACATTCCGCCAGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GDVSFLTLSSSGTNELVLKVRND*TFRQLV Trigger: CACCAGCTGGCGGAATGTCAAGTCATTTCTGACTTT...CAGAACCAGTTCATTTGTTCCAGAGCTGCTGAGTGTGAGAAATGAGACGTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| CDS-3UTR CAA 90 bp | GGGGACGTCTCATTTCTCACACTCAGCAGCTCTGGAACAAATGAACTGGTTCTGAGAAGGCGAGAACATTaGGATAATTCTCACTGCACA | + |
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Preference number: 5 (lower is better) Translates to: GDVSFLTLSSSGTNELVLRRREH*DNSHCT Trigger: TGTGCAGTGAGAATTATCCAAATGTTCTCGCCTTCT...CAGAACCAGTTCATTTGTTCCAGAGCTGCTGAGTGTGAGAAATGAGACGTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| CDS-3UTR CAA 90 bp | ACACTTAGTACAGTGGCTGTCTTAGATCGTAGCTTTCCAATTGCTGCAGCATCTATCCCAGTTCACACATaGGGATTTGATAAGGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TLSTVAVLDRSFPIAAASIPVHT*GFDKGA Trigger: GGCCCCCTTATCAAATCCCAATGTGTGAACTGGGAT...AGATGCTGCAGCAATTGGAAAGCTACGATCTAAGACAGCCACTGTACTAAGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| CDS TCA 90 bp | AGCACCTTTACAGTCAACAGAAAATGCAGATGTGACTCCATTTGCTaGTCCCAGTTCACACATTGGGATTTGATAAGGGGGCCTCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: STFTVNRKCRCDSIC*SQFTHWDLIRGPQL Trigger: AAGCTGAGGCCCCCTTATCAAATCCCAATGTGTGAACTGGGATCAGCAAATGGAGTCACATCTGCATTTTCTGTTGACTGTAAAGGTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043521.5 ENSMUST00000154064.3 ENSMUST00000232420.2 |
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| CDS-3UTR CAA 90 bp | ACACTTAGTACAGTGGCTGTCTTAGATCGTAGCTTTCCAATTGCTGCAGCATCTTTCACACATTGGGATTaGATAAGGGGGCCTCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TLSTVAVLDRSFPIAAASFTHWD*IRGPQL Trigger: AAGCTGAGGCCCCCTTATCAAATCCCAATGTGTGAA...AGATGCTGCAGCAATTGGAAAGCTACGATCTAAGACAGCCACTGTACTAAGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043521.5 |
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| CDS TCA 90 bp | GATACATGTTGCACAGACAGATTAAGCCGAAAGTCAGAAATGACTTaGCATTCCGCCAGCTGGTGTAGTACACAAGTAAATAACACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: DTCCTDRLSRKSEMT*HSASWCSTQVNNTA Trigger: TGCAGTGTTATTTACTTGTGTACTACACCAGCTGGCGGAATGTCAAGTCATTTCTGACTTTCGGCTTAATCTGTCTGTGCAACATGTATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232420.2 |
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| CDS TCA 72 bp | ACAGTCAACAGAAAATGCAGATGTGACTCCATTTGCTaGTCCCAGTTCACACATTGGGATTTGATAAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: TVNRKCRCDSIC*SQFTHWDLIRG Trigger: CCCCCTTATCAAATCCCAATGTGTGAACTGGGATCAGCAAATGGAGTCACATCTGCATTTTCTGTTGACTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043521.5 ENSMUST00000154064.3 ENSMUST00000232420.2 |
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| CDS TCA 72 bp | TACCAGCACCTTTACAGTCAACAGAAAATGCAGATGTaGCTCCATTTGCTGATCCCAGTTCACACATTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: YQHLYSQQKMQM*LHLLIPVHTLG Trigger: TCCCAATGTGTGAACTGGGATCAGCAAATGGAGTCACATCTGCATTTTCTGTTGACTGTAAAGGTGCTGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043521.5 ENSMUST00000154064.3 ENSMUST00000232420.2 |
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| CDS CAA 72 bp | TCTGAAGCTCATCCAGGAAAGAGAAGGCGAGAACATTaGGATAATTCTCACTGCACAACATCATGTAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SEAHPGKRRREH*DNSHCTTSCSS Trigger: TGAGCTACATGATGTTGTGCAGTGAGAATTATCCAAATGTTCTCGCCTTCTCTTTCCTGGATGAGCTTCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043521.5 ENSMUST00000154064.3 ENSMUST00000232420.2 |
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| CDS CAA 72 bp | ATAGCGCCCCGTTTTCAGTGTACATCTATCAGGAAATaGAGCAAGTTTCCTGGACAGCATCTTAAAGTACTT | + |
|
Preference number: 6 (lower is better) Translates to: IAPRFQCTSIRK*SKFPGQHLKVL Trigger: AAGTACTTTAAGATGCTGTCCAGGAAACTTGCTCAATTTCCTGATAGATGTACACTGAAAACGGGGCGCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043521.5 ENSMUST00000154064.3 ENSMUST00000232420.2 |
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| CDS CAA 90 bp | ATTAATGTTATAGCGCCCCGTTTTCAGTGTACATCTATCAGGAAATaGAGCAAGTTTCCTGGACAGCATCTTAAAGTACTTTCTGCACTC | + |
|
Preference number: 6 (lower is better) Translates to: INVIAPRFQCTSIRK*SKFPGQHLKVLSAL Trigger: GAGTGCAGAAAGTACTTTAAGATGCTGTCCAGGAAACTTGCTCAATTTCCTGATAGATGTACACTGAAAACGGGGCGCTATAACATTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043521.5 ENSMUST00000154064.3 ENSMUST00000232420.2 |
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