Pregenerated sensors for SEC14L5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091712Ensembl transcript IDs: ENSMUST00000165810.2, ENSMUST00000230616.2
Found 286 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCCCAGCTGTaGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGAT | + |
Preference number: 1 (lower is better) Translates to: LCTLGPCRGITTPQL*HRAICIQQGPRCLD Trigger: ATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAGCTGGGGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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3UTR TCA 90 bp | CTGACCCTGCTGGCAACATGTGCTCCTTCACTCTCCCTGCAACTGTaGTTGTTCAGCATGGACCCAGGCCCCCGCAGGCTAAGGAGAGCT | + |
Preference number: 1 (lower is better) Translates to: LTLLATCAPSLSLQL*LFSMDPGPRRLRRA Trigger: AGCTCTCCTTAGCCTGCGGGGGCCTGGGTCCATGCTGAACAATCACAGTTGCAGGGAGAGTGAAGGAGCACATGTTGCCAGCAGGGTCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR TCA 90 bp | CTGGGAGGCACTCCTGCTGCTCTTGACTTGGGGTTGCTGACAACATaGAGTCCATGCTTGCTCACTGGGCCCCACAGCCAGAAACCACCC | + |
Preference number: 1 (lower is better) Translates to: LGGTPAALDLGLLTT*SPCLLTGPHSQKPP Trigger: GGGTGGTTTCTGGCTGTGGGGCCCAGTGAGCAAGCATGGACTTCATGTTGTCAGCAACCCCAAGTCAAGAGCAGCAGGAGTGCCTCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR CCA 90 bp | GTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATaGGCTTCGTTCTCATTCTCAACGCCACCTGATGCCAGAAGCTCG | + |
Preference number: 1 (lower is better) Translates to: VAPRHLHPTGSQVSR*ASFSFSTPPDARSS Trigger: CGAGCTTCTGGCATCAGGTGGCGTTGAGAATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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3UTR CCA 90 bp | GCTGTGGACAAAGCTTCAGTCGGGCAGAAACCCAGGACAGCGGTGTaGCTCAGTGCTGGTTGGCAGGGGTGGAAACTAGTGTGGGCTAAG | + |
Preference number: 1 (lower is better) Translates to: AVDKASVGQKPRTAV*LSAGWQGWKLVWAK Trigger: CTTAGCCCACACTAGTTTCCACCCCTGCCAACCAGCACTGAGCCACACCGCTGTCCTGGGTTTCTGCCCGACTGAAGCTTTGTCCACAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR TCA 90 bp | CCCACAGCCAGAAACCACCCCTCTCAGCCTGCTGACCTGCAGAAATaGTCCCAACTCTATGCCGGGCTGACAGAGAAGAGCAGATGGTGG | + |
Preference number: 1 (lower is better) Translates to: PTARNHPSQPADLQK*SQLYAGLTEKSRWW Trigger: CCACCATCTGCTCTTCTCTGTCAGCCCGGCATAGAGTTGGGATCATTTCTGCAGGTCAGCAGGCTGAGAGGGGTGGTTTCTGGCTGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR GCA 90 bp | CTTCCCGGCACCCTTGGGCTATTTTTAGTTGCTGGCTTTCCCCAGTaGCAACGTAGGAGGGCACAGTGGATGCCTCCACAGCCATCTGTT | + |
Preference number: 1 (lower is better) Translates to: LPGTLGLFLVAGFPQ*QRRRAQWMPPQPSV Trigger: AACAGATGGCTGTGGAGGCATCCACTGTGCCCTCCTACGTTGGCACTGGGGAAAGCCAGCAACTAAAAATAGCCCAAGGGTGCCGGGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR CCA 90 bp | GCCAGTAGTCCTTCAGCTGGCCTTGCCCTTTCCAGAGCACGTGATTaGCCTGAGAAATGTCCTGTCATCCAAGCTGGCCAAATCACGGCG | + |
Preference number: 1 (lower is better) Translates to: ASSPSAGLALSRARD*PEKCPVIQAGQITA Trigger: CGCCGTGATTTGGCCAGCTTGGATGACAGGACATTTCTCAGGCCAATCACGTGCTCTGGAAAGGGCAAGGCCAGCTGAAGGACTACTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR CCA 90 bp | TCAGTCGGGCAGAAACCCAGGACAGCGGTGTGGCTCAGTGCTGGTTaGCAGGGGTGGAAACTAGTGTGGGCTAAGGAAAACCAGAAATCC | + |
Preference number: 1 (lower is better) Translates to: SVGQKPRTAVWLSAG*QGWKLVWAKENQKS Trigger: GGATTTCTGGTTTTCCTTAGCCCACACTAGTTTCCACCCCTGCCAACCAGCACTGAGCCACACCGCTGTCCTGGGTTTCTGCCCGACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR CCA 90 bp | AATGAAGAAAGAAACCCACACCACACACCTCTCTGCCCTGGGGTGTaGGGAAAGGAAAGGCCGTGGACAGCTTGGCAGGCCCTTCTATGG | + |
Preference number: 1 (lower is better) Translates to: NEERNPHHTPLCPGV*GKERPWTAWQALLW Trigger: CCATAGAAGGGCCTGCCAAGCTGTCCACGGCCTTTCCTTTCCCCACACCCCAGGGCAGAGAGGTGTGTGGTGTGGGTTTCTTTCTTCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR TCA 90 bp | AAGCTTTGGTTGGAGAGTCAGGTTAGCAGTGCAGTTAAAGGTCACTaGGACGGACTCGGATTGAGGCGGGGTGGGAGAATGCTCGCCCAG | + |
Preference number: 1 (lower is better) Translates to: KLWLESQVSSAVKGH*DGLGLRRGGRMLAQ Trigger: CTGGGCGAGCATTCTCCCACCCCGCCTCAATCCGAGTCCGTCTCAGTGACCTTTAACTGCACTGCTAACCTGACTCTCCAACCAAAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR GCA 90 bp | AGAACTACAGCCACGGGAGGCTGTTTCCTGCAGGAAACAGAGCCCTaGCTCCCATCACAGCTTCTTAGACAGTGCTCAGTCACAAACAGC | + |
Preference number: 1 (lower is better) Translates to: RTTATGGCFLQETEP*LPSQLLRQCSVTNS Trigger: GCTGTTTGTGACTGAGCACTGTCTAAGAAGCTGTGATGGGAGGCAGGGCTCTGTTTCCTGCAGGAAACAGCCTCCCGTGGCTGTAGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR GCA 90 bp | TGGAAGGAGACAAGAATGGCTGGAGTCACCCCATCACCCCATCATTaGCTGGAACTAGGCAGAAGCCCTGGGCTTCCCTATGTTCCTCAA | + |
Preference number: 1 (lower is better) Translates to: WKETRMAGVTPSPHH*LELGRSPGLPYVPQ Trigger: TTGAGGAACATAGGGAAGCCCAGGGCTTCTGCCTAGTTCCAGGCAATGATGGGGTGATGGGGTGACTCCAGCCATTCTTGTCTCCTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR GCA 90 bp | ATCCTCCTGCCTCCACCCAGCACTGAGACTACAGGTGTGCATCTCTaGATCTGGCTTTTTACATGGCTGCTGGGGATCCAAACTCGGGAT | + |
Preference number: 1 (lower is better) Translates to: ILLPPPSTETTGVHL*IWLFTWLLGIQTRD Trigger: ATCCCGAGTTTGGATCCCCAGCAGCCATGTAAAAAGCCAGATGCAGAGATGCACACCTGTAGTCTCAGTGCTGGGTGGAGGCAGGAGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR GCA 90 bp | CTCCAGGTATCCTCCTGCCTCCACCCAGCACTGAGACTACAGGTGTaGATCTCTGCATCTGGCTTTTTACATGGCTGCTGGGGATCCAAA | + |
Preference number: 1 (lower is better) Translates to: LQVSSCLHPALRLQV*ISASGFLHGCWGSK Trigger: TTTGGATCCCCAGCAGCCATGTAAAAAGCCAGATGCAGAGATGCACACCTGTAGTCTCAGTGCTGGGTGGAGGCAGGAGGATACCTGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR TCA 90 bp | ATTCTGACCACGATTCCCATCACTGGGAGGCACTCCTGCTGCTCTTaGCTTGGGGTTGCTGACAACATGAAGTCCATGCTTGCTCACTGG | + |
Preference number: 1 (lower is better) Translates to: ILTTIPITGRHSCCS*LGVADNMKSMLAHW Trigger: CCAGTGAGCAAGCATGGACTTCATGTTGTCAGCAACCCCAAGTCAAGAGCAGCAGGAGTGCCTCCCAGTGATGGGAATCGTGGTCAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR GCA 90 bp | GAAGAGACCTTCAGGGCCCTGTTACACTCTGTTTGTCACAGTGTCTaGAGGGTAAATGTGCAAAGGCTGCCAGACAGCTTCTCCCCTGAG | + |
Preference number: 1 (lower is better) Translates to: EETFRALLHSVCHSV*RVNVQRLPDSFSPE Trigger: CTCAGGGGAGAAGCTGTCTGGCAGCCTTTGCACATTTACCCTGCAGACACTGTGACAAACAGAGTGTAACAGGGCCCTGAAGGTCTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR GCA 90 bp | ACAAATGAACAGAATGAAGAAAGAAACCCACACCACACACCTCTCTaGCCTGGGGTGTGGGGAAAGGAAAGGCCGTGGACAGCTTGGCAG | + |
Preference number: 1 (lower is better) Translates to: TNEQNEERNPHHTPL*PGVWGKERPWTAWQ Trigger: CTGCCAAGCTGTCCACGGCCTTTCCTTTCCCCACACCCCAGGGCAGAGAGGTGTGTGGTGTGGGTTTCTTTCTTCATTCTGTTCATTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR CCA 90 bp | CTGCCTCCACCCAGCACTGAGACTACAGGTGTGCATCTCTGCATCTaGCTTTTTACATGGCTGCTGGGGATCCAAACTCGGGATATCATG | + |
Preference number: 1 (lower is better) Translates to: LPPPSTETTGVHLCI*LFTWLLGIQTRDIM Trigger: CATGATATCCCGAGTTTGGATCCCCAGCAGCCATGTAAAAAGCCAGATGCAGAGATGCACACCTGTAGTCTCAGTGCTGGGTGGAGGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR TCA 90 bp | ACGTGTTCCATTGCTTTTCCTGAAGAGCAGAACAGGGCAGAATTCTaGCCACGATTCCCATCACTGGGAGGCACTCCTGCTGCTCTTGAC | + |
Preference number: 1 (lower is better) Translates to: TCSIAFPEEQNRAEF*PRFPSLGGTPAALD Trigger: GTCAAGAGCAGCAGGAGTGCCTCCCAGTGATGGGAATCGTGGTCAGAATTCTGCCCTGTTCTGCTCTTCAGGAAAAGCAATGGAACACGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR TCA 90 bp | TGTCTGCAGGGTAAATGTGCAAAGGCTGCCAGACAGCTTCTCCCCTaGGCGTTTCTCAGAGTCAAGCTTTGGTTGGAGAGTCAGGTTAGC | + |
Preference number: 1 (lower is better) Translates to: CLQGKCAKAARQLLP*AFLRVKLWLESQVS Trigger: GCTAACCTGACTCTCCAACCAAAGCTTGACTCTGAGAAACGCTCAGGGGAGAAGCTGTCTGGCAGCCTTTGCACATTTACCCTGCAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR CCA 90 bp | GCCCACTACTCCCCCTTGGAGCGTTTGGGAAAGTCATATCAGTCTTaGAGAAAGTCCCTGAGTCAGATCAGTTCCAGGATAGAGATGCCA | + |
Preference number: 1 (lower is better) Translates to: AHYSPLERLGKSYQS*RKSLSQISSRIEMP Trigger: TGGCATCTCTATCCTGGAACTGATCTGACTCAGGGACTTTCTCCAAGACTGATATGACTTTCCCAAACGCTCCAAGGGGGAGTAGTGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR CCA 90 bp | GGACAGCTTGGCAGGCCCTTCTATGGGATATTTTGTGCACGTGTGTaGTATAGTGTGAAGGCCATGTGTTGGGTGTCTTCATTTGCTCTC | + |
Preference number: 1 (lower is better) Translates to: GQLGRPFYGIFCARV*YSVKAMCWVSSFAL Trigger: GAGAGCAAATGAAGACACCCAACACATGGCCTTCACACTATACCACACACGTGCACAAAATATCCCATAGAAGGGCCTGCCAAGCTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR CCA 90 bp | AGACTACAGGTGTGCATCTCTGCATCTGGCTTTTTACATGGCTGCTaGGGATCCAAACTCGGGATATCATGCTTGTACCACGGCCATTTT | + |
Preference number: 1 (lower is better) Translates to: RLQVCISASGFLHGC*GSKLGISCLYHGHF Trigger: AAAATGGCCGTGGTACAAGCATGATATCCCGAGTTTGGATCCCCAGCAGCCATGTAAAAAGCCAGATGCAGAGATGCACACCTGTAGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR CCA 90 bp | ACTGAGACTGGCCAAAAGTCAACAACAAACAGTGACCACCTTCTGTaGATCCAGGAAATAAAAAGAGAGAAGTCTTGGTCTCCAGGAAGG | + |
Preference number: 1 (lower is better) Translates to: TETGQKSTTNSDHLL*IQEIKREKSWSPGR Trigger: CCTTCCTGGAGACCAAGACTTCTCTCTTTTTATTTCCTGGATCCACAGAAGGTGGTCACTGTTTGTTGTTGACTTTTGGCCAGTCTCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR-3UTR CCA 90 bp | CAGTCGGGCAGAAACCCAGGACAGCGGTGTGGCTCAGTGCTGGTTGGCAGGGGTGAGGGCACCCAGCCCTaGTCCCATCCTAGACTCCAG | + |
Preference number: 2 (lower is better) Translates to: QSGRNPGQRCGSVLVGRGEGTQP*SHPRLQ Trigger: CTGGAGTCTAGGATGGGACCAGGGCTGGGTGCCCTC...ACCCCTGCCAACCAGCACTGAGCCACACCGCTGTCCTGGGTTTCTGCCCGACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR-3UTR TCA 90 bp | AGCTGGGAACCCTGCTGGGCCAGCCATACCTGCAGCAAGACCCCTTTCTGCCACGCTGACCTGCAGAAATaGTCCCAACTCTATGCCGGG | + |
Preference number: 2 (lower is better) Translates to: SWEPCWASHTCSKTPFCHADLQK*SQLYAG Trigger: CCCGGCATAGAGTTGGGATCATTTCTGCAGGTCAGC...GTGGCAGAAAGGGGTCTTGCTGCAGGTATGGCTGGCCCAGCAGGGTTCCCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR-3UTR TCA 90 bp | GTCTTGGTCTCCAGGAAGGCCCACTACTCCCCCTTGGAGCGTTTGGGAAAGTCAAGTCACAGCAAATGGTaGGAGGGCACCCAGCCCTGG | + |
Preference number: 2 (lower is better) Translates to: VLVSRKAHYSPLERLGKSSHSKW*EGTQPW Trigger: CCAGGGCTGGGTGCCCTCTCACCATTTGCTGTGACT...TGACTTTCCCAAACGCTCCAAGGGGGAGTAGTGGGCCTTCCTGGAGACCAAGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR-3UTR CCA 90 bp | GCAGCCTCTCAGCAGGGAGAGGGTGTGAGGCAAGTGTGCAAAGAGATGTTGAGTGCTCCCTCTGCACTCTaGGTCCCTGCCGTGGGATCA | + |
Preference number: 2 (lower is better) Translates to: AASQQGEGVRQVCKEMLSAPSAL*VPAVGS Trigger: TGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGC...ACTCAACATCTCTTTGCACACTTGCCTCACACCCTCTCCCTGCTGAGAGGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR-3UTR CCA 90 bp | TTTGAAGCTGCCATCAGCAGCCTCTCAGCAGGGAGAGGGTGTGAGGCAAGTGTGGAGAAGAGCAGATGGTaGCGCTTCTGGGCCAGGCTG | + |
Preference number: 2 (lower is better) Translates to: FEAAISSLSAGRGCEASVEKSRW*RFWARL Trigger: CAGCCTGGCCCAGAAGCGCCACCATCTGCTCTTCTC...CACACTTGCCTCACACCCTCTCCCTGCTGAGAGGCTGCTGATGGCAGCTTCAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR CAA 90 bp | ACCATCGACCCAGTCACCCACCCGCCAGTAGTCCTTCAGCTGGCCTaGCCCTTTCCAGAGCACGTGATTGGCCTGAGAAATGTCCTGTCA | + |
Preference number: 2 (lower is better) Translates to: TIDPVTHPPVVLQLA*PFPEHVIGLRNVLS Trigger: TGACAGGACATTTCTCAGGCCAATCACGTGCTCTGGAAAGGGCAAGGCCAGCTGAAGGACTACTGGCGGGTGGGTGACTGGGTCGATGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR-3UTR TCA 90 bp | GAAAGGCCGTGGACAGCTTGGCAGGCCCTTCTATGGGATATTTTGTGCACGTGTGAGACGGACTCGGATTaGGGCGGGGTGGGAGAATGC | + |
Preference number: 2 (lower is better) Translates to: ERPWTAWQALLWDILCTCETDSD*GGVGEC Trigger: GCATTCTCCCACCCCGCCTCAATCCGAGTCCGTCTC...ACACGTGCACAAAATATCCCATAGAAGGGCCTGCCAAGCTGTCCACGGCCTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR-3UTR TCA 90 bp | AGCTGGGAACCCTGCTGGGCCAGCCATACCTGCAGCAAGACCCCTTTCTGCCACGTCAACAACAAACAGTaGCCACCTTCTGTGGATCCA | + |
Preference number: 2 (lower is better) Translates to: SWEPCWASHTCSKTPFCHVNNKQ*PPSVDP Trigger: TGGATCCACAGAAGGTGGTCACTGTTTGTTGTTGAC...GTGGCAGAAAGGGGTCTTGCTGCAGGTATGGCTGGCCCAGCAGGGTTCCCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR CAA 90 bp | CTGGAAGGAGACAAGAATGGCTGGAGTCACCCCATCACCCCATCATaGCCTGGAACTAGGCAGAAGCCCTGGGCTTCCCTATGTTCCTCA | + |
Preference number: 2 (lower is better) Translates to: LEGDKNGWSHPITPS*PGTRQKPWASLCSS Trigger: TGAGGAACATAGGGAAGCCCAGGGCTTCTGCCTAGTTCCAGGCAATGATGGGGTGATGGGGTGACTCCAGCCATTCTTGTCTCCTTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR-3UTR TCA 90 bp | TTTGAAGCTGCCATCAGCAGCCTCTCAGCAGGGAGAGGGTGTGAGGCAAGTGTGCTCTCCCTGCAACTGTaGTTGTTCAGCATGGACCCA | + |
Preference number: 2 (lower is better) Translates to: FEAAISSLSAGRGCEASVLSLQL*LFSMDP Trigger: TGGGTCCATGCTGAACAATCACAGTTGCAGGGAGAG...CACACTTGCCTCACACCCTCTCCCTGCTGAGAGGCTGCTGATGGCAGCTTCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR-3UTR CCA 90 bp | AGTCTTGGTCTCCAGGAAGGCCCACTACTCCCCCTTGGAGCGTTTGGGAAAGTCGGAAGGAGACAAGAATaGCTGGAGTCACCCCATCAC | + |
Preference number: 2 (lower is better) Translates to: SLGLQEGPLLPLGAFGKVGRRQE*LESPHH Trigger: GTGATGGGGTGACTCCAGCCATTCTTGTCTCCTTCC...GACTTTCCCAAACGCTCCAAGGGGGAGTAGTGGGCCTTCCTGGAGACCAAGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR-3UTR GCA 90 bp | TTTGAAGCTGCCATCAGCAGCCTCTCAGCAGGGAGAGGGTGTGAGGCAAGTGTGCTCAGCCTGCTGACCTaGAGAAATGATCCCAACTCT | + |
Preference number: 2 (lower is better) Translates to: FEAAISSLSAGRGCEASVLSLLT*RNDPNS Trigger: AGAGTTGGGATCATTTCTGCAGGTCAGCAGGCTGAG...CACACTTGCCTCACACCCTCTCCCTGCTGAGAGGCTGCTGATGGCAGCTTCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR CAA 90 bp | GGTGGAGAGAGAGGAAGAGACCTTCAGGGCCCTGTTACACTCTGTTaGTCACAGTGTCTGCAGGGTAAATGTGCAAAGGCTGCCAGACAG | + |
Preference number: 2 (lower is better) Translates to: GGERGRDLQGPVTLC*SQCLQGKCAKAARQ Trigger: CTGTCTGGCAGCCTTTGCACATTTACCCTGCAGACACTGTGACAAACAGAGTGTAACAGGGCCCTGAAGGTCTCTTCCTCTCTCTCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR-3UTR TCA 90 bp | GCAGCCTCTCAGCAGGGAGAGGGTGTGAGGCAAGTGTGCAAAGAGATGTTGAGTTCCAGATTAGACATCTaGCCCTGCTGGCAACATGTG | + |
Preference number: 2 (lower is better) Translates to: AASQQGEGVRQVCKEMLSSRLDI*PCWQHV Trigger: CACATGTTGCCAGCAGGGTCAGATGTCTAATCTGGA...ACTCAACATCTCTTTGCACACTTGCCTCACACCCTCTCCCTGCTGAGAGGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR CAA 90 bp | GAAGTCTTGGTCTCCAGGAAGGCCCACTACTCCCCCTTGGAGCGTTaGGGAAAGTCATATCAGTCTTGGAGAAAGTCCCTGAGTCAGATC | + |
Preference number: 2 (lower is better) Translates to: EVLVSRKAHYSPLER*GKSYQSWRKSLSQI Trigger: GATCTGACTCAGGGACTTTCTCCAAGACTGATATGACTTTCCCAAACGCTCCAAGGGGGAGTAGTGGGCCTTCCTGGAGACCAAGACTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR-3UTR CCA 90 bp | CTGCACGAGGTTTCACAGCTAGTGAAAGAAAGGCTGGGGTTTCAAGGATATAGATGTGATTGTTCAGCATaGACCCAGGCCCCCGCAGGC | + |
Preference number: 2 (lower is better) Translates to: LHEVSQLVKERLGFQGYRCDCSA*TQAPAG Trigger: GCCTGCGGGGGCCTGGGTCCATGCTGAACAATCACA...TCTATATCCTTGAAACCCCAGCCTTTCTTTCACTAGCTGTGAAACCTCGTGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR-3UTR CCA 90 bp | GCAGCCTCTCAGCAGGGAGAGGGTGTGAGGCAAGTGTGCAAAGAGATGTTGAGTTCAAATGGTTTTAGCTaGGGGTGGAGAGAGAGGAAG | + |
Preference number: 2 (lower is better) Translates to: AASQQGEGVRQVCKEMLSSNGFS*GWRERK Trigger: CTTCCTCTCTCTCCACCCCCAGCTAAAACCATTTGA...ACTCAACATCTCTTTGCACACTTGCCTCACACCCTCTCCCTGCTGAGAGGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR-3UTR GCA 90 bp | AGCTGGGAACCCTGCTGGGCCAGCCATACCTGCAGCAAGACCCCTTTCTGCCACGATTTCTACATGCTATaGCTCAATCCTAATTTCTAC | + |
Preference number: 2 (lower is better) Translates to: SWEPCWASHTCSKTPFCHDFYML*LNPNFY Trigger: GTAGAAATTAGGATTGAGGCATAGCATGTAGAAATC...GTGGCAGAAAGGGGTCTTGCTGCAGGTATGGCTGGCCCAGCAGGGTTCCCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR-3UTR GCA 90 bp | GCATCTGGCTTTTTACATGGCTGCTGGGGATCCAAACTCGGGATATCATGCTTGAGCAAGACCCCTTTCTaGCACCCCAAACAAAGGACC | + |
Preference number: 2 (lower is better) Translates to: ASGFLHGCWGSKLGISCLSKTPF*HPKQRT Trigger: GGTCCTTTGTTTGGGGTGGCAGAAAGGGGTCTTGCT...CAAGCATGATATCCCGAGTTTGGATCCCCAGCAGCCATGTAAAAAGCCAGATGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR-3UTR GCA 90 bp | CTGCACGAGGTTTCACAGCTAGTGAAAGAAAGGCTGGGGTTTCAAGGATATAGATGGGCCAGCCATACCTaGAGCAAGACCCCTTTCTGC | + |
Preference number: 2 (lower is better) Translates to: LHEVSQLVKERLGFQGYRWASHT*SKTPFC Trigger: GCAGAAAGGGGTCTTGCTGCAGGTATGGCTGGCCCA...TCTATATCCTTGAAACCCCAGCCTTTCTTTCACTAGCTGTGAAACCTCGTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR-3UTR CCA 90 bp | GAAAGGCCGTGGACAGCTTGGCAGGCCCTTCTATGGGATATTTTGTGCACGTGTCCCCCTTGGAGCGTTTaGGAAAGTCATATCAGTCTT | + |
Preference number: 2 (lower is better) Translates to: ERPWTAWQALLWDILCTCPPWSV*ESHISL Trigger: AAGACTGATATGACTTTCCCAAACGCTCCAAGGGGG...ACACGTGCACAAAATATCCCATAGAAGGGCCTGCCAAGCTGTCCACGGCCTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR CAA 90 bp | AAAAAGAGAGAAGTCTTGGTCTCCAGGAAGGCCCACTACTCCCCCTaGGAGCGTTTGGGAAAGTCATATCAGTCTTGGAGAAAGTCCCTG | + |
Preference number: 2 (lower is better) Translates to: KKREVLVSRKAHYSP*ERLGKSYQSWRKSL Trigger: CAGGGACTTTCTCCAAGACTGATATGACTTTCCCAAACGCTCCAAGGGGGAGTAGTGGGCCTTCCTGGAGACCAAGACTTCTCTCTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR-3UTR TCA 90 bp | CTGCACGAGGTTTCACAGCTAGTGAAAGAAAGGCTGGGGTTTCAAGGATATAGAACCAGGCTGAGACTCTaGCTCCAATCACGCCTGAAC | + |
Preference number: 2 (lower is better) Translates to: LHEVSQLVKERLGFQGYRTRLRL*LQSRLN Trigger: GTTCAGGCGTGATTGGAGTCAGAGTCTCAGCCTGGT...TCTATATCCTTGAAACCCCAGCCTTTCTTTCACTAGCTGTGAAACCTCGTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
||
3UTR CAA 90 bp | CACACAGACACACACACACACACACACACACACACACGTGTTCCATaGCTTTTCCTGAAGAGCAGAACAGGGCAGAATTCTGACCACGAT | + |
Preference number: 2 (lower is better) Translates to: HTDTHTHTHTHTRVP*LFLKSRTGQNSDHD Trigger: ATCGTGGTCAGAATTCTGCCCTGTTCTGCTCTTCAGGAAAAGCAATGGAACACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
||
3UTR-3UTR TCA 90 bp | TACATGCTATGCCTCAATCCTAATTTCTACATGGTAAGCCACTCTCTAGGCAAATCCCCTGCACCAGGCTaGGACTCTGACTCCAATCAC | + |
Preference number: 2 (lower is better) Translates to: YMLCLNPNFYMVSHSLGKSPAPG*DSDSNH Trigger: GTGATTGGAGTCAGAGTCTCAGCCTGGTGCAGGGGA...TTTGCCTAGAGAGTGGCTTACCATGTAGAAATTAGGATTGAGGCATAGCATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
||
3UTR-3UTR TCA 90 bp | CAAAACAAAAACAATCACCACAGAAATGGACCGTGCAGTGGCTCGGTGGTAGTGTTCCATTGCTTTTCCTaGAGAGCAGAACAGGGCAGA | + |
Preference number: 2 (lower is better) Translates to: QNKNNHHRNGPCSGSVVVFHCFS*RAEQGR Trigger: TCTGCCCTGTTCTGCTCTTCAGGAAAAGCAATGGAA...CACTACCACCGAGCCACTGCACGGTCCATTTCTGTGGTGATTGTTTTTGTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
||
3UTR-3UTR GCA 90 bp | CAAAACAAAAACAATCACCACAGAAATGGACCGTGCAGTGGCTCGGTGGTAGTGCTCCTTCACTCTCCCTaGAACTGTGATTGTTCAGCA | + |
Preference number: 2 (lower is better) Translates to: QNKNNHHRNGPCSGSVVVLLHSP*NCDCSA Trigger: TGCTGAACAATCACAGTTGCAGGGAGAGTGAAGGAG...CACTACCACCGAGCCACTGCACGGTCCATTTCTGTGGTGATTGTTTTTGTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
||
3UTR-3UTR CCA 90 bp | GAAAGGCCGTGGACAGCTTGGCAGGCCCTTCTATGGGATATTTTGTGCACGTGTAGTGACCACCTTCTGTaGATCCAGGAAATAAAAAGA | + |
Preference number: 2 (lower is better) Translates to: ERPWTAWQALLWDILCTCSDHLL*IQEIKR Trigger: TCTTTTTATTTCCTGGATCCACAGAAGGTGGTCACT...ACACGTGCACAAAATATCCCATAGAAGGGCCTGCCAAGCTGTCCACGGCCTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
||
3UTR-3UTR CCA 90 bp | GCATCTGGCTTTTTACATGGCTGCTGGGGATCCAAACTCGGGATATCATGCTTGAAGTCATATCAGTCTTaGAGAAAGTCCCTGAGTCAG | + |
Preference number: 2 (lower is better) Translates to: ASGFLHGCWGSKLGISCLKSYQS*RKSLSQ Trigger: CTGACTCAGGGACTTTCTCCAAGACTGATATGACTT...CAAGCATGATATCCCGAGTTTGGATCCCCAGCAGCCATGTAAAAAGCCAGATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
||
3UTR-3UTR CCA 90 bp | CAAAACAAAAACAATCACCACAGAAATGGACCGTGCAGTGGCTCGGTGGTAGTGCTGCTCGTGGTGATTTaGAGACAACTGGTTTTCAAT | + |
Preference number: 2 (lower is better) Translates to: QNKNNHHRNGPCSGSVVVLLVVI*RQLVFN Trigger: ATTGAAAACCAGTTGTCTCCAAATCACCACGAGCAG...CACTACCACCGAGCCACTGCACGGTCCATTTCTGTGGTGATTGTTTTTGTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
||
3UTR GCA 72 bp | GCCGTGAAGCGAAGCTCCCTCTGCACTCTGGGTCCCTaGCGTGGGATCACCACACCCCAGCTGTGGCACCGC | + |
Preference number: 3 (lower is better) Translates to: AVKRSSLCTLGP*RGITTPQLWHR Trigger: GCGGTGCCACAGCTGGGGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCTTCACGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
||
3UTR CCA 72 bp | CTGGGTCCCTGCCGTGGGATCACCACACCCCAGCTGTaGCACCGCGCCATCTGCATCCAACAGGGTCCCAGG | + |
Preference number: 3 (lower is better) Translates to: LGPCRGITTPQL*HRAICIQQGPR Trigger: CCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAGCTGGGGTGTGGTGATCCCACGGCAGGGACCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
||
3UTR CCA 72 bp | GAAGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTaGGATCACCACACCCCAGCTGTGGCACCGCGCCAT | + |
Preference number: 3 (lower is better) Translates to: EAKLPLHSGSLP*DHHTPAVAPRH Trigger: ATGGCGCGGTGCCACAGCTGGGGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
||
3UTR CCA 72 bp | AGAAACCCACACCACACACCTCTCTGCCCTGGGGTGTaGGGAAAGGAAAGGCCGTGGACAGCTTGGCAGGCC | + |
Preference number: 3 (lower is better) Translates to: RNPHHTPLCPGV*GKERPWTAWQA Trigger: GGCCTGCCAAGCTGTCCACGGCCTTTCCTTTCCCCACACCCCAGGGCAGAGAGGTGTGTGGTGTGGGTTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
||
3UTR GCA 72 bp | GAGGTCAGCTGGGAACCCTGCTGGGCCAGCCATACCTaGAGCAAGACCCCTTTCTGCCACCCCAAACAAAGG | + |
Preference number: 3 (lower is better) Translates to: EVSWEPCWASHT*SKTPFCHPKQR Trigger: CCTTTGTTTGGGGTGGCAGAAAGGGGTCTTGCTGCAGGTATGGCTGGCCCAGCAGGGTTCCCAGCTGACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
||
3UTR TCA 72 bp | GCAGTGCAGTTAAAGGTCACTGAGACGGACTCGGATTaGGGCGGGGTGGGAGAATGCTCGCCCAGCATGAGC | + |
Preference number: 3 (lower is better) Translates to: AVQLKVTETDSD*GGVGECSPSMS Trigger: GCTCATGCTGGGCGAGCATTCTCCCACCCCGCCTCAATCCGAGTCCGTCTCAGTGACCTTTAACTGCACTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
||
3UTR CCA 72 bp | AGGCCCCCGCAGGCTAAGGAGAGCTTCCTAGTGGCCTaGGACTTGGGGAAGAGACATTCCCTTGCGCACTTT | + |
Preference number: 3 (lower is better) Translates to: RPPQAKESFLVA*DLGKRHSLAHF Trigger: AAAGTGCGCAAGGGAATGTCTCTTCCCCAAGTCCCAGGCCACTAGGAAGCTCTCCTTAGCCTGCGGGGGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
||
3UTR TCA 72 bp | CTGGCAACATGTGCTCCTTCACTCTCCCTGCAACTGTaGTTGTTCAGCATGGACCCAGGCCCCCGCAGGCTA | + |
Preference number: 3 (lower is better) Translates to: LATCAPSLSLQL*LFSMDPGPRRL Trigger: TAGCCTGCGGGGGCCTGGGTCCATGCTGAACAATCACAGTTGCAGGGAGAGTGAAGGAGCACATGTTGCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
||
3UTR TCA 72 bp | TGGGAGGCACTCCTGCTGCTCTTGACTTGGGGTTGCTaGCAACATGAAGTCCATGCTTGCTCACTGGGCCCC | + |
Preference number: 3 (lower is better) Translates to: WEALLLLLTWGC*QHEVHACSLGP Trigger: GGGGCCCAGTGAGCAAGCATGGACTTCATGTTGTCAGCAACCCCAAGTCAAGAGCAGCAGGAGTGCCTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
||
3UTR GCA 72 bp | GGGGAAACAGAACTACAGCCACGGGAGGCTGTTTCCTaGAGGAAACAGAGCCCTGCCTCCCATCACAGCTTC | + |
Preference number: 3 (lower is better) Translates to: GETELQPREAVS*RKQSPASHHSF Trigger: GAAGCTGTGATGGGAGGCAGGGCTCTGTTTCCTGCAGGAAACAGCCTCCCGTGGCTGTAGTTCTGTTTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
||
3UTR GCA 72 bp | GCTTTCCCCAGTGCCAACGTAGGAGGGCACAGTGGATaGCTCCACAGCCATCTGTTCCTGTTACAACCCAGG | + |
Preference number: 3 (lower is better) Translates to: AFPSANVGGHSG*LHSHLFLLQPR Trigger: CCTGGGTTGTAACAGGAACAGATGGCTGTGGAGGCATCCACTGTGCCCTCCTACGTTGGCACTGGGGAAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
||
3UTR CCA 72 bp | AAAGCTTCAGTCGGGCAGAAACCCAGGACAGCGGTGTaGCTCAGTGCTGGTTGGCAGGGGTGGAAACTAGTG | + |
Preference number: 3 (lower is better) Translates to: KASVGQKPRTAV*LSAGWQGWKLV Trigger: CACTAGTTTCCACCCCTGCCAACCAGCACTGAGCCACACCGCTGTCCTGGGTTTCTGCCCGACTGAAGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
||
3UTR CCA 72 bp | GCTGGCTTTCCCCAGTGCCAACGTAGGAGGGCACAGTaGATGCCTCCACAGCCATCTGTTCCTGTTACAACC | + |
Preference number: 3 (lower is better) Translates to: AGFPQCQRRRAQ*MPPQPSVPVTT Trigger: GGTTGTAACAGGAACAGATGGCTGTGGAGGCATCCACTGTGCCCTCCTACGTTGGCACTGGGGAAAGCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
||
3UTR-3UTR CAA 90 bp | GCAGCCTCTCAGCAGGGAGAGGGTGTGAGGCAAGTGTGCAAAGAGATGTTGAGTGTGGCTCAGTGCTGGTaGGCAGGGGTGGAAACTAGT | + |
Preference number: 3 (lower is better) Translates to: AASQQGEGVRQVCKEMLSVAQCW*AGVETS Trigger: ACTAGTTTCCACCCCTGCCAACCAGCACTGAGCCAC...ACTCAACATCTCTTTGCACACTTGCCTCACACCCTCTCCCTGCTGAGAGGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
||
3UTR TCA 72 bp | CTGACCTGCAGAAATGATCCCAACTCTATGCCGGGCTaGCAGAGAAGAGCAGATGGTGGCGCTTCTGGGCCA | + |
Preference number: 3 (lower is better) Translates to: LTCRNDPNSMPG*QRRADGGASGP Trigger: TGGCCCAGAAGCGCCACCATCTGCTCTTCTCTGTCAGCCCGGCATAGAGTTGGGATCATTTCTGCAGGTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR TCA 72 bp | ACTCCTGCTGCTCTTGACTTGGGGTTGCTGACAACATaGAGTCCATGCTTGCTCACTGGGCCCCACAGCCAG | + |
Preference number: 3 (lower is better) Translates to: TPAALDLGLLTT*SPCLLTGPHSQ Trigger: CTGGCTGTGGGGCCCAGTGAGCAAGCATGGACTTCATGTTGTCAGCAACCCCAAGTCAAGAGCAGCAGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
||
3UTR TCA 72 bp | AGGCAAGTGTGCAAAGAGATGTTGAGTCAAGAGGCCTaGGGTCAGCTGGGAACCCTGCTGGGCCAGCCATAC | + |
Preference number: 3 (lower is better) Translates to: RQVCKEMLSQEA*GQLGTLLGQPY Trigger: GTATGGCTGGCCCAGCAGGGTTCCCAGCTGACCTCAGGCCTCTTGACTCAACATCTCTTTGCACACTTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
||
3UTR TCA 72 bp | GAACGTGGAGCTTACCAGTTCAACTACGCTGGTCAGTaGGCTCCAGGTATCCTCCTGCCTCCACCCAGCACT | + |
Preference number: 3 (lower is better) Translates to: ERGAYQFNYAGQ*APGILLPPPST Trigger: AGTGCTGGGTGGAGGCAGGAGGATACCTGGAGCTCACTGACCAGCGTAGTTGAACTGGTAAGCTCCACGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
||
3UTR GCA 72 bp | CCTAGTGGCCTGGGACTTGGGGAAGAGACATTCCCTTaGGCACTTTCCTGGCACCAAACAGTGATGACCCCA | + |
Preference number: 3 (lower is better) Translates to: PSGLGLGEETFP*ALSWHQTVMTP Trigger: TGGGGTCATCACTGTTTGGTGCCAGGAAAGTGCGCAAGGGAATGTCTCTTCCCCAAGTCCCAGGCCACTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR CCA 72 bp | CGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATaGGCTTCGTTCTCATTCTCAACGCCACCTGATGCC | + |
Preference number: 3 (lower is better) Translates to: RHLHPTGSQVSR*ASFSFSTPPDA Trigger: GGCATCAGGTGGCGTTGAGAATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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3UTR CCA 72 bp | CCCAGGAGGAGACCTCTGGAAGGAGACAAGAATGGCTaGAGTCACCCCATCACCCCATCATTGCCTGGAACT | + |
Preference number: 3 (lower is better) Translates to: PRRRPLEGDKNG*SHPITPSLPGT Trigger: AGTTCCAGGCAATGATGGGGTGATGGGGTGACTCCAGCCATTCTTGTCTCCTTCCAGAGGTCTCCTCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR CCA 72 bp | CAGAAACCCAGGACAGCGGTGTGGCTCAGTGCTGGTTaGCAGGGGTGGAAACTAGTGTGGGCTAAGGAAAAC | + |
Preference number: 3 (lower is better) Translates to: QKPRTAVWLSAG*QGWKLVWAKEN Trigger: GTTTTCCTTAGCCCACACTAGTTTCCACCCCTGCCAACCAGCACTGAGCCACACCGCTGTCCTGGGTTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR GCA 72 bp | ACCCTTGGGCTATTTTTAGTTGCTGGCTTTCCCCAGTaGCAACGTAGGAGGGCACAGTGGATGCCTCCACAG | + |
Preference number: 3 (lower is better) Translates to: TLGLFLVAGFPQ*QRRRAQWMPPQ Trigger: CTGTGGAGGCATCCACTGTGCCCTCCTACGTTGGCACTGGGGAAAGCCAGCAACTAAAAATAGCCCAAGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR CCA 72 bp | CCTTCAGCTGGCCTTGCCCTTTCCAGAGCACGTGATTaGCCTGAGAAATGTCCTGTCATCCAAGCTGGCCAA | + |
Preference number: 3 (lower is better) Translates to: PSAGLALSRARD*PEKCPVIQAGQ Trigger: TTGGCCAGCTTGGATGACAGGACATTTCTCAGGCCAATCACGTGCTCTGGAAAGGGCAAGGCCAGCTGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR CCA 72 bp | AGGACAGCGGTGTGGCTCAGTGCTGGTTGGCAGGGGTaGAAACTAGTGTGGGCTAAGGAAAACCAGAAATCC | + |
Preference number: 3 (lower is better) Translates to: RTAVWLSAGWQG*KLVWAKENQKS Trigger: GGATTTCTGGTTTTCCTTAGCCCACACTAGTTTCCACCCCTGCCAACCAGCACTGAGCCACACCGCTGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR CCA 72 bp | AGAACAGGGCAGAATTCTGACCACGATTCCCATCACTaGGAGGCACTCCTGCTGCTCTTGACTTGGGGTTGC | + |
Preference number: 3 (lower is better) Translates to: RTGQNSDHDSHH*EALLLLLTWGC Trigger: GCAACCCCAAGTCAAGAGCAGCAGGAGTGCCTCCCAGTGATGGGAATCGTGGTCAGAATTCTGCCCTGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR TCA 72 bp | TGCAGTGGCTCGGTGGTAGTGATTGATTGCCCAGCATaGCCAAGGCCTGGATCTGAGTCTCTGTGCAACAAC | + |
Preference number: 3 (lower is better) Translates to: CSGSVVVIDCPA*PRPGSESLCNN Trigger: GTTGTTGCACAGAGACTCAGATCCAGGCCTTGGTCATGCTGGGCAATCAATCACTACCACCGAGCCACTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR GCA 72 bp | CCTCCACCCAGCACTGAGACTACAGGTGTGCATCTCTaGATCTGGCTTTTTACATGGCTGCTGGGGATCCAA | + |
Preference number: 3 (lower is better) Translates to: PPPSTETTGVHL*IWLFTWLLGIQ Trigger: TTGGATCCCCAGCAGCCATGTAAAAAGCCAGATGCAGAGATGCACACCTGTAGTCTCAGTGCTGGGTGGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR CCA 72 bp | ATCACCCCATCATTGCCTGGAACTAGGCAGAAGCCCTaGGCTTCCCTATGTTCCTCAAGTCAGGGGTGGTTA | + |
Preference number: 3 (lower is better) Translates to: ITPSLPGTRQKP*ASLCSSSQGWL Trigger: TAACCACCCCTGACTTGAGGAACATAGGGAAGCCCAGGGCTTCTGCCTAGTTCCAGGCAATGATGGGGTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR TCA 72 bp | ACGATTCCCATCACTGGGAGGCACTCCTGCTGCTCTTaGCTTGGGGTTGCTGACAACATGAAGTCCATGCTT | + |
Preference number: 3 (lower is better) Translates to: TIPITGRHSCCS*LGVADNMKSML Trigger: AAGCATGGACTTCATGTTGTCAGCAACCCCAAGTCAAGAGCAGCAGGAGTGCCTCCCAGTGATGGGAATCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR TCA 72 bp | ATTGCTTTTCCTGAAGAGCAGAACAGGGCAGAATTCTaGCCACGATTCCCATCACTGGGAGGCACTCCTGCT | + |
Preference number: 3 (lower is better) Translates to: IAFPEEQNRAEF*PRFPSLGGTPA Trigger: AGCAGGAGTGCCTCCCAGTGATGGGAATCGTGGTCAGAATTCTGCCCTGTTCTGCTCTTCAGGAAAAGCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR GCA 72 bp | TTCAGGGCCCTGTTACACTCTGTTTGTCACAGTGTCTaGAGGGTAAATGTGCAAAGGCTGCCAGACAGCTTC | + |
Preference number: 3 (lower is better) Translates to: FRALLHSVCHSV*RVNVQRLPDSF Trigger: GAAGCTGTCTGGCAGCCTTTGCACATTTACCCTGCAGACACTGTGACAAACAGAGTGTAACAGGGCCCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
||
3UTR CCA 72 bp | AAGTCTTGGTCTCCAGGAAGGCCCACTACTCCCCCTTaGAGCGTTTGGGAAAGTCATATCAGTCTTGGAGAA | + |
Preference number: 3 (lower is better) Translates to: KSWSPGRPTTPP*SVWESHISLGE Trigger: TTCTCCAAGACTGATATGACTTTCCCAAACGCTCCAAGGGGGAGTAGTGGGCCTTCCTGGAGACCAAGACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR CCA 72 bp | CTTCTGTGGATCCAGGAAATAAAAAGAGAGAAGTCTTaGTCTCCAGGAAGGCCCACTACTCCCCCTTGGAGC | + |
Preference number: 3 (lower is better) Translates to: LLWIQEIKREKS*SPGRPTTPPWS Trigger: GCTCCAAGGGGGAGTAGTGGGCCTTCCTGGAGACCAAGACTTCTCTCTTTTTATTTCCTGGATCCACAGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR CCA 72 bp | GTGTGCATCTCTGCATCTGGCTTTTTACATGGCTGCTaGGGATCCAAACTCGGGATATCATGCTTGTACCAC | + |
Preference number: 3 (lower is better) Translates to: VCISASGFLHGC*GSKLGISCLYH Trigger: GTGGTACAAGCATGATATCCCGAGTTTGGATCCCCAGCAGCCATGTAAAAAGCCAGATGCAGAGATGCACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR CCA 72 bp | GGCAGGCCCTTCTATGGGATATTTTGTGCACGTGTGTaGTATAGTGTGAAGGCCATGTGTTGGGTGTCTTCA | + |
Preference number: 3 (lower is better) Translates to: GRPFYGIFCARV*YSVKAMCWVSS Trigger: TGAAGACACCCAACACATGGCCTTCACACTATACCACACACGTGCACAAAATATCCCATAGAAGGGCCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR CCA 72 bp | ACTACAGGTGTGCATCTCTGCATCTGGCTTTTTACATaGCTGCTGGGGATCCAAACTCGGGATATCATGCTT | + |
Preference number: 3 (lower is better) Translates to: TTGVHLCIWLFT*LLGIQTRDIML Trigger: AAGCATGATATCCCGAGTTTGGATCCCCAGCAGCCATGTAAAAAGCCAGATGCAGAGATGCACACCTGTAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR-3UTR CAA 90 bp | CTGCACGAGGTTTCACAGCTAGTGAAAGAAAGGCTGGGGTTTCAAGGATATAGACTCGGGATATCATGCTaGTACCACGGCCATTTTACC | + |
Preference number: 3 (lower is better) Translates to: LHEVSQLVKERLGFQGYRLGISC*YHGHFT Trigger: GGTAAAATGGCCGTGGTACAAGCATGATATCCCGAG...TCTATATCCTTGAAACCCCAGCCTTTCTTTCACTAGCTGTGAAACCTCGTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
||
3UTR TCA 72 bp | ACACACACACACACACACGTGTTCCATTGCTTTTCCTaGAGAGCAGAACAGGGCAGAATTCTGACCACGATT | + |
Preference number: 3 (lower is better) Translates to: THTHTHVFHCFS*RAEQGRILTTI Trigger: AATCGTGGTCAGAATTCTGCCCTGTTCTGCTCTTCAGGAAAAGCAATGGAACACGTGTGTGTGTGTGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
||
3UTR TCA 72 bp | TCTATGGGATATTTTGTGCACGTGTGTGGTATAGTGTaGAGGCCATGTGTTGGGTGTCTTCATTTGCTCTCC | + |
Preference number: 3 (lower is better) Translates to: SMGYFVHVCGIV*RPCVGCLHLLS Trigger: GGAGAGCAAATGAAGACACCCAACACATGGCCTTCACACTATACCACACACGTGCACAAAATATCCCATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
||
3UTR CCA 72 bp | GGCCAAAAGTCAACAACAAACAGTGACCACCTTCTGTaGATCCAGGAAATAAAAAGAGAGAAGTCTTGGTCT | + |
Preference number: 3 (lower is better) Translates to: GQKSTTNSDHLL*IQEIKREKSWS Trigger: AGACCAAGACTTCTCTCTTTTTATTTCCTGGATCCACAGAAGGTGGTCACTGTTTGTTGTTGACTTTTGGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR TCA 90 bp | AGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCCCAGCAGGAGGTGGTGGCGCTaGGCTGAGAGAAGCGGCTGG | + |
Preference number: 4 (lower is better) Translates to: SEAPSALWVPAVGSPHPSRRWWR*AERSGW Trigger: CCAGCCGCTTCTCTCAGCTCAGCGCCACCACCTCCT...GCTGGGGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | GCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCCCAGCTGTGGCCTCCGCTCCACGGTGTaGACTGCCCCATCTGTGCTC | + |
Preference number: 4 (lower is better) Translates to: APSALWVPAVGSPHPSCGLRSTV*TAPSVL Trigger: GAGCACAGATGGGGCAGTGCACACCGTGGAGCGGAG...GCCACAGCTGGGGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | GCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCCCAGCTGTGGCCTCCTGGACTGGGGCTaGTGTCCAGCGGGGAATGTG | + |
Preference number: 4 (lower is better) Translates to: APSALWVPAVGSPHPSCGLLDWG*CPAGNV Trigger: CACATTCCCCGCTGGACACCAGCCCCAGTCCAGGAG...GCCACAGCTGGGGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | GCCAGGCTGGAGCTGTGGACAAAGCTTCAGTCGGGCAGAAACCCAGGACAGCGGGTCCTCCTCCTGGACTaGGGCTGGTGTCCAGCGGGG | + |
Preference number: 4 (lower is better) Translates to: ARLELWTKLQSGRNPGQRVLLLD*GWCPAG Trigger: CCCCGCTGGACACCAGCCCCAGTCCAGGAGGAGGAC...CCGCTGTCCTGGGTTTCTGCCCGACTGAAGCTTTGTCCACAGCTCCAGCCTGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | CCACACCCCAGCTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCCGCCAGCTCAAGGACTaGCACAACATGTCCCGGGCC | + |
Preference number: 4 (lower is better) Translates to: PHPSCGTAPSASNRVPGVRQLKD*HNMSRA Trigger: GGCCCGGGACATGTTGTGCCAGTCCTTGAGCTGGCG...GACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAGCTGGGGTGTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR TCA 90 bp | GCTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTGTGGTGGCGCTGAGCTaGGAGAAGCGGCTGGCACAG | + |
Preference number: 4 (lower is better) Translates to: AVAPRHLHPTGSQVSRWAVVALS*EKRLAQ Trigger: CTGTGCCAGCCGCTTCTCTCAGCTCAGCGCCACCAC...AGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR TCA 90 bp | GCCAGGCTGGAGCTGTGGACAAAGCTTCAGTCGGGCAGAAACCCAGGACAGCGGGTGGTGGCGCTGAGCTaGGAGAAGCGGCTGGCACAG | + |
Preference number: 4 (lower is better) Translates to: ARLELWTKLQSGRNPGQRVVALS*EKRLAQ Trigger: CTGTGCCAGCCGCTTCTCTCAGCTCAGCGCCACCAC...CCGCTGTCCTGGGTTTCTGCCCGACTGAAGCTTTGTCCACAGCTCCAGCCTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR TCA 90 bp | GCTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTAGGAGGTGGTGGCGCTaGGCTGAGAGAAGCGGCTGG | + |
Preference number: 4 (lower is better) Translates to: AVAPRHLHPTGSQVSRWARRWWR*AERSGW Trigger: CCAGCCGCTTCTCTCAGCTCAGCGCCACCACCTCCT...AGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | GCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCCCAGCTGTGGCAGGAGATCCACCTGGTaGTGCTTCCGCCAGCTCAAG | + |
Preference number: 4 (lower is better) Translates to: APSALWVPAVGSPHPSCGRRSTW*CFRQLK Trigger: CTTGAGCTGGCGGAAGCAGCACCAGGTGGATCTCCT...GCCACAGCTGGGGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | ACCCCAGCTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGAGGGGGCCGCCAGGTCTaGAGAAGGAGATCCACCTGG | + |
Preference number: 4 (lower is better) Translates to: TPAVAPRHLHPTGSQVSRGGRQV*RRRSTW Trigger: CCAGGTGGATCTCCTTCTGCAGACCTGGCGGCCCCC...TCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAGCTGGGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | GCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCCCAGCTGTGGCCCGGCAGATGAGGGGTaGCTCTACACGGCTGTAATC | + |
Preference number: 4 (lower is better) Translates to: APSALWVPAVGSPHPSCGPADEG*LYTAVI Trigger: GATTACAGCCGTGTAGAGGCACCCCTCATCTGCCGG...GCCACAGCTGGGGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | CGTGAAGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCCCACACCTGGGAGACTaGAGGCCACACTCTCAGGGG | + |
Preference number: 4 (lower is better) Translates to: REAKLPLHSGSLPWDHHTPHLGD*RPHSQG Trigger: CCCCTGAGAGTGTGGCCTGCAGTCTCCCAGGTGTGG...GGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCTTCACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | ACACCCCAGCTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTACGGACGTCCTCCTCCTaGACTGGGGCTGGTGTCCAG | + |
Preference number: 4 (lower is better) Translates to: TPQLWHRAICIQQGPRCLRTSSS*TGAGVQ Trigger: CTGGACACCAGCCCCAGTCCAGGAGGAGGACGTCCG...TAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAGCTGGGGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | GCCAGGCTGGAGCTGTGGACAAAGCTTCAGTCGGGCAGAAACCCAGGACAGCGGCTCCGCTCCACGGTGTaGACTGCCCCATCTGTGCTC | + |
Preference number: 4 (lower is better) Translates to: ARLELWTKLQSGRNPGQRLRSTV*TAPSVL Trigger: GAGCACAGATGGGGCAGTGCACACCGTGGAGCGGAG...CCGCTGTCCTGGGTTTCTGCCCGACTGAAGCTTTGTCCACAGCTCCAGCCTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | AGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCCCAGCAGATCCACCTGGTGCTaGTTCCGCCAGCTCAAGGAC | + |
Preference number: 4 (lower is better) Translates to: SEAPSALWVPAVGSPHPSRSTWC*FRQLKD Trigger: GTCCTTGAGCTGGCGGAAGCAGCACCAGGTGGATCT...GCTGGGGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | CTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCACTGGGGCACAAGCTaGCTGCGGACGTCCTCCTCC | + |
Preference number: 4 (lower is better) Translates to: LWHRAICIQQGPRCLDGLHWGTS*LRTSSS Trigger: GGAGGAGGACGTCCGCAGCCAGCTTGTGCCCCAGTG...AAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | CATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCAGGTCCCCAGCTCAGAAGCAGGGCCTaGGGCATCACTGGGACCCTC | + |
Preference number: 4 (lower is better) Translates to: HSQRHLMPEARRLPAGPQLRSRA*GITGTL Trigger: GAGGGTCCCAGTGATGCCCCAGGCCCTGCTTCTGAG...CTGGGGACCTGCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | TCAAGAGCCGTGAAGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCCTCACTCCAGGCTCCTaGGGACTGAGCTTGGGTGCC | + |
Preference number: 4 (lower is better) Translates to: SRAVKRSSLCTLGPCRGILTPGS*GLSLGA Trigger: GGCACCCAAGCTCAGTCCCCAGGAGCCTGGAGTGAG...GATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCTTCACGGCTCTTGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | ACACCCCAGCTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTACTCACTCCAGGCTCCTaGGGACTGAGCTTGGGTGCC | + |
Preference number: 4 (lower is better) Translates to: TPQLWHRAICIQQGPRCLLTPGS*GLSLGA Trigger: GGCACCCAAGCTCAGTCCCCAGGAGCCTGGAGTGAG...TAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAGCTGGGGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | AGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCCCAGCCAATCAGCTGCCCACTaGCTCTCACTCCAGGCTCCT | + |
Preference number: 4 (lower is better) Translates to: SEAPSALWVPAVGSPHPSQSAAH*LSLQAP Trigger: AGGAGCCTGGAGTGAGAGCCAGTGGGCAGCTGATTG...GCTGGGGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | CCACACCCCAGCTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCACCATCGAGCCACTGTaGGACTGGCCAGAGGAGGAA | + |
Preference number: 4 (lower is better) Translates to: PHPSCGTAPSASNRVPGVTIEPL*DWPEEE Trigger: TTCCTCCTCTGGCCAGTCCCACAGTGGCTCGATGGT...GACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAGCTGGGGTGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | TTCTCATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCAGGTCCGGGGGCCGCCAGGTCTaGAGAAGGAGATCCACCTGG | + |
Preference number: 4 (lower is better) Translates to: FSFSTPPDARSSQAASRSGGRQV*RRRSTW Trigger: CCAGGTGGATCTCCTTCTGCAGACCTGGCGGCCCCC...GGACCTGCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATGAGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | CACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCACTGGGGCACAAGCTaGCTGCGGACGTCCTCCTCC | + |
Preference number: 4 (lower is better) Translates to: HRAICIQQGPRCLDGLRSHWGTS*LRTSSS Trigger: GGAGGAGGACGTCCGCAGCCAGCTTGTGCCCCAGTG...AGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | GCTTCGTTCTCATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCGGCCTGGGGCATCACTaGGACCCTCCATGTCCAGGG | + |
Preference number: 4 (lower is better) Translates to: ASFSFSTPPDARSSQAASGLGHH*DPPCPG Trigger: CCCTGGACATGGAGGGTCCCAGTGATGCCCCAGGCC...GCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATGAGAACGAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | CAGTCGGGCAGAAACCCAGGACAGCGGTGTGGCTCAGTGCTGGTTGGCAGGGGTAGAAGGAGATCCACCTaGTGCTGCTTCCGCCAGCTC | + |
Preference number: 4 (lower is better) Translates to: QSGRNPGQRCGSVLVGRGRRRST*CCFRQL Trigger: GAGCTGGCGGAAGCAGCACCAGGTGGATCTCCTTCT...ACCCCTGCCAACCAGCACTGAGCCACACCGCTGTCCTGGGTTTCTGCCCGACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | GCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCCCAGCTGTGGCTCAGATAGAGGGACTTaGGGACCATCCCTCCTTCTG | + |
Preference number: 4 (lower is better) Translates to: APSALWVPAVGSPHPSCGSDRGT*GPSLLL Trigger: CAGAAGGAGGGATGGTCCCCAAGTCCCTCTATCTGA...GCCACAGCTGGGGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | GCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCCCAGCTGTGGCCTTCTGGTATCTCCATaGCAACCTCATAGGGGGTCC | + |
Preference number: 4 (lower is better) Translates to: APSALWVPAVGSPHPSCGLLVSP*QPHRGS Trigger: GGACCCCCTATGAGGTTGCCATGGAGATACCAGAAG...GCCACAGCTGGGGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | CTCAAGAGCCGTGAAGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATACAGCAGCTTGCACTTaGGGCCAGGGCTGTGCAGAG | + |
Preference number: 4 (lower is better) Translates to: LKSREAKLPLHSGSLPWDTAACT*GQGCAE Trigger: CTCTGCACAGCCCTGGCCCCAAGTGCAAGCTGCTGT...ATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCTTCACGGCTCTTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | ACACCCCAGCTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGCTGAGAGAAGCGGCTaGCACAGGATTCCAGGCTGG | + |
Preference number: 4 (lower is better) Translates to: TPQLWHRAICIQQGPRCLAERSG*HRIPGW Trigger: CCAGCCTGGAATCCTGTGCCAGCCGCTTCTCTCAGC...TAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAGCTGGGGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR TCA 90 bp | CTCAAGAGCCGTGAAGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATAACCAGTGCCGAAGCTaGACCAGGCAACTCTCCTGC | + |
Preference number: 4 (lower is better) Translates to: LKSREAKLPLHSGSLPWDNQCRS*TRQLSC Trigger: GCAGGAGAGTTGCCTGGTTCAGCTTCGGCACTGGTT...ATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCTTCACGGCTCTTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | ATGAAGTCCATGCTTGCTCACTGGGCCCCACAGCCAGAAACCACCCCTCTCAGCCATCCACTCGCAGCCTaGAGCTCCGCTCCACGGTGT | + |
Preference number: 4 (lower is better) Translates to: MKSMLAHWAPQPETTPLSHPLAA*SSAPRC Trigger: ACACCGTGGAGCGGAGCTGCAGGCTGCGAGTGGATG...GCTGAGAGGGGTGGTTTCTGGCTGTGGGGCCCAGTGAGCAAGCATGGACTTCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | ATGAAGTCCATGCTTGCTCACTGGGCCCCACAGCCAGAAACCACCCCTCTCAGCCCACACCTGGGAGACTaGAGGCCACACTCTCAGGGG | + |
Preference number: 4 (lower is better) Translates to: MKSMLAHWAPQPETTPLSPHLGD*RPHSQG Trigger: CCCCTGAGAGTGTGGCCTGCAGTCTCCCAGGTGTGG...GCTGAGAGGGGTGGTTTCTGGCTGTGGGGCCCAGTGAGCAAGCATGGACTTCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | TTCTCATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCAGGTCCCTCCTGGACTGGGGCTaGTGTCCAGCGGGGAATGTG | + |
Preference number: 4 (lower is better) Translates to: FSFSTPPDARSSQAASRSLLDWG*CPAGNV Trigger: CACATTCCCCGCTGGACACCAGCCCCAGTCCAGGAG...GGACCTGCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATGAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | CGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATTCGTCCTCCTCCTGGACTaGGGCTGGTGTCCAGCGGGG | + |
Preference number: 4 (lower is better) Translates to: RHLHPTGSQVSRWASFSFVLLLD*GWCPAG Trigger: CCCCGCTGGACACCAGCCCCAGTCCAGGAGGAGGAC...GAATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | TCAAGAGCCGTGAAGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCGACGTCATCCACACCTaGGAGACTGCAGGCCACACT | + |
Preference number: 4 (lower is better) Translates to: SRAVKRSSLCTLGPCRGIDVIHT*ETAGHT Trigger: AGTGTGGCCTGCAGTCTCCCAGGTGTGGATGACGTC...GATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCTTCACGGCTCTTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | GCTGGAGTCACCCCATCACCCCATCATTGCCTGGAACTAGGCAGAAGCCCTGGGGCTGAGAGAAGCGGCTaGCACAGGATTCCAGGCTGG | + |
Preference number: 4 (lower is better) Translates to: AGVTPSPHHCLELGRSPGAERSG*HRIPGW Trigger: CCAGCCTGGAATCCTGTGCCAGCCGCTTCTCTCAGC...CCCAGGGCTTCTGCCTAGTTCCAGGCAATGATGGGGTGATGGGGTGACTCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR TCA 90 bp | CTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTACAAATGCCGCATGTTaGGGCCCTCCAGGTCCAGCA | + |
Preference number: 4 (lower is better) Translates to: LWHRAICIQQGPRCLDGLTNAAC*GPPGPA Trigger: TGCTGGACCTGGAGGGCCTCAACATGCGGCATTTGT...AAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | CCACACCCCAGCTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCAGGAAGCGCAGGATATaGTCGTCTTTGGGGATCTTG | + |
Preference number: 4 (lower is better) Translates to: PHPSCGTAPSASNRVPGVRKRRI*SSLGIL Trigger: CAAGATCCCCAAAGACGAGCATATCCTGCGCTTCCT...GACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAGCTGGGGTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | CGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATTTGGGGCCAGGGCTGTaGAGAGCCGTCAGGACGTCA | + |
Preference number: 4 (lower is better) Translates to: RAICIQQGPRCLDGLRSHLGPGL*RAVRTS Trigger: TGACGTCCTGACGGCTCTGCACAGCCCTGGCCCCAA...ATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | CAGCCCTGGTCCCATCCTAGACTCCAGATCCAGGGGACAAGAGGTAGAACATCCTTGGGGCCAGGGCTGTaGAGAGCCGTCAGGACGTCA | + |
Preference number: 4 (lower is better) Translates to: QPWSHPRLQIQGTRGRTSLGPGL*RAVRTS Trigger: TGACGTCCTGACGGCTCTGCACAGCCCTGGCCCCAA...GGATGTTCTACCTCTTGTCCCCTGGATCTGGAGTCTAGGATGGGACCAGGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | CATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCAGGTCCCCAGGTCCAGCGGGGAATGTaGGATGTTCCCTGGGAAATG | + |
Preference number: 4 (lower is better) Translates to: HSQRHLMPEARRLPAGPQVQRGM*DVPWEM Trigger: CATTTCCCAGGGAACATCCCACATTCCCCGCTGGAC...CTGGGGACCTGCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | GCAGCCTCTCAGCAGGGAGAGGGTGTGAGGCAAGTGTGCAAAGAGATGTTGAGTGGCCTGGGGCATCACTaGGACCCTCCATGTCCAGGG | + |
Preference number: 4 (lower is better) Translates to: AASQQGEGVRQVCKEMLSGLGHH*DPPCPG Trigger: CCCTGGACATGGAGGGTCCCAGTGATGCCCCAGGCC...ACTCAACATCTCTTTGCACACTTGCCTCACACCCTCTCCCTGCTGAGAGGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | GCCGTGAAGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACAGGGATCTTGCCTTTGTaGGTCTCCTGTAACCAGTGC | + |
Preference number: 4 (lower is better) Translates to: AVKRSSLCTLGPCRGITTGILPL*VSCNQC Trigger: GCACTGGTTACAGGAGACCCACAAAGGCAAGATCCC...TGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCTTCACGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | CAGCCCTGGTCCCATCCTAGACTCCAGATCCAGGGGACAAGAGGTAGAACATCCCGCCAGCTCAAGGACTaGCACAACATGTCCCGGGCC | + |
Preference number: 4 (lower is better) Translates to: QPWSHPRLQIQGTRGRTSRQLKD*HNMSRA Trigger: GGCCCGGGACATGTTGTGCCAGTCCTTGAGCTGGCG...GGATGTTCTACCTCTTGTCCCCTGGATCTGGAGTCTAGGATGGGACCAGGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | GCTTCGTTCTCATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCCTCCACTGCTGTAGCTaGTCAGCCTGCTCCTGCTCC | + |
Preference number: 4 (lower is better) Translates to: ASFSFSTPPDARSSQAASLHCCS*SACSCS Trigger: GGAGCAGGAGCAGGCTGACCAGCTACAGCAGTGGAG...GCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATGAGAACGAAGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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3UTR CAA 72 bp | CCGCAGGCTAAGGAGAGCTTCCTAGTGGCCTGGGACTaGGGGAAGAGACATTCCCTTGCGCACTTTCCTGGC | + |
Preference number: 4 (lower is better) Translates to: PQAKESFLVAWD*GKRHSLAHFPG Trigger: GCCAGGAAAGTGCGCAAGGGAATGTCTCTTCCCCAAGTCCCAGGCCACTAGGAAGCTCTCCTTAGCCTGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR TCA 90 bp | CATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCAGGTCCCCAGGGACGTTTCTCTGAATaGAGACCACGTGCTCCACAC | + |
Preference number: 4 (lower is better) Translates to: HSQRHLMPEARRLPAGPQGRFSE*RPRAPH Trigger: GTGTGGAGCACGTGGTCTTCATTCAGAGAAACGTCC...CTGGGGACCTGCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR TCA 90 bp | TTCTCATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCAGGTCCACAAATGCCGCATGTTaGGGCCCTCCAGGTCCAGCA | + |
Preference number: 4 (lower is better) Translates to: FSFSTPPDARSSQAASRSTNAAC*GPPGPA Trigger: TGCTGGACCTGGAGGGCCTCAACATGCGGCATTTGT...GGACCTGCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATGAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR TCA 90 bp | CGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATGTAACATGGGAGCCCTaGATGCTCTGCCCTTCCCGG | + |
Preference number: 4 (lower is better) Translates to: RAICIQQGPRCLDGLRSHVTWEP*MLCPSR Trigger: CCGGGAAGGGCAGAGCATTCAGGGCTCCCATGTTAC...ATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR TCA 90 bp | GCTTCGTTCTCATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCCTCTCAGGGGAACTGTaGATCTGCCACTGGAGCAGG | + |
Preference number: 4 (lower is better) Translates to: ASFSFSTPPDARSSQAASLSGEL*ICHWSR Trigger: CCTGCTCCAGTGGCAGATTCACAGTTCCCCTGAGAG...GCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATGAGAACGAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | CGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATTCCATCCACTCGCAGCCTaGAGCTCCGCTCCACGGTGT | + |
Preference number: 4 (lower is better) Translates to: RHLHPTGSQVSRWASFSFHPLAA*SSAPRC Trigger: ACACCGTGGAGCGGAGCTGCAGGCTGCGAGTGGATG...GAATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | AGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCCCAGCACATTGGCAGTGTACTaGTTCATGGCGATCTTCTCC | + |
Preference number: 4 (lower is better) Translates to: SEAPSALWVPAVGSPHPSTLAVY*FMAIFS Trigger: GGAGAAGATCGCCATGAAGCAGTACACTGCCAATGT...GCTGGGGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | TTCTCATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCAGGTCCTGTAGCTGGTCAGCCTaGTCCTGCTCCTCCTCTGTC | + |
Preference number: 4 (lower is better) Translates to: FSFSTPPDARSSQAASRSCSWSA*SCSSSV Trigger: GACAGAGGAGGAGCAGGAGCAGGCTGACCAGCTACA...GGACCTGCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATGAGAA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | GCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCCCAGCTGTGGCCATGACCAGCTCGAATaGATACTTGTATACTCGGAC | + |
Preference number: 4 (lower is better) Translates to: APSALWVPAVGSPHPSCGHDQLE*ILVYSD Trigger: GTCCGAGTATACAAGTATCCATTCGAGCTGGTCATG...GCCACAGCTGGGGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | CGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATTCCTCAGAAGCAGGGCCTaGGGCATCACTGGGACCCTC | + |
Preference number: 4 (lower is better) Translates to: RHLHPTGSQVSRWASFSFLRSRA*GITGTL Trigger: GAGGGTCCCAGTGATGCCCCAGGCCCTGCTTCTGAG...GAATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | ACCCCAGCTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATCCCTCGGAGCACACTaGCAGAATGGTAGGTTTCAC | + |
Preference number: 4 (lower is better) Translates to: TPAVAPRHLHPTGSQVSRSLGAH*QNGRFH Trigger: GTGAAACCTACCATTCTGCCAGTGTGCTCCGAGGGA...TCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAGCTGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | TCAAGAGCCGTGAAGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCTCCCTCGGAGCACACTaGCAGAATGGTAGGTTTCAC | + |
Preference number: 4 (lower is better) Translates to: SRAVKRSSLCTLGPCRGISLGAH*QNGRFH Trigger: GTGAAACCTACCATTCTGCCAGTGTGCTCCGAGGGA...GATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCTTCACGGCTCTTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | CTCAAGAGCCGTGAAGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCTTCTGGTATCTCCATaGCAACCTCATAGGGGGTCC | + |
Preference number: 4 (lower is better) Translates to: LKSREAKLPLHSGSLPWDLLVSP*QPHRGS Trigger: GGACCCCCTATGAGGTTGCCATGGAGATACCAGAAG...ATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCTTCACGGCTCTTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | GCCGTGAAGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACAGGTGCCTGCTTTGCATaGTACAGACTGAACACCACA | + |
Preference number: 4 (lower is better) Translates to: AVKRSSLCTLGPCRGITTGACFA*YRLNTT Trigger: TGTGGTGTTCAGTCTGTACCATGCAAAGCAGGCACC...TGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCTTCACGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | ATGAAGTCCATGCTTGCTCACTGGGCCCCACAGCCAGAAACCACCCCTCTCAGCGACGTCATCCACACCTaGGAGACTGCAGGCCACACT | + |
Preference number: 4 (lower is better) Translates to: MKSMLAHWAPQPETTPLSDVIHT*ETAGHT Trigger: AGTGTGGCCTGCAGTCTCCCAGGTGTGGATGACGTC...GCTGAGAGGGGTGGTTTCTGGCTGTGGGGCCCAGTGAGCAAGCATGGACTTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR TCA 90 bp | AGCTGGGAACCCTGCTGGGCCAGCCATACCTGCAGCAAGACCCCTTTCTGCCACTTCAGGACGTTTCTCTaGATGAAGACCACGTGCTCC | + |
Preference number: 4 (lower is better) Translates to: SWEPCWASHTCSKTPFCHFRTFL*MKTTCS Trigger: GGAGCACGTGGTCTTCATTCAGAGAAACGTCCTGAA...GTGGCAGAAAGGGGTCTTGCTGCAGGTATGGCTGGCCCAGCAGGGTTCCCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR TCA 90 bp | CTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTTACTGCCACTGTAGATaGGGAACTTCCGCCTGGTGT | + |
Preference number: 4 (lower is better) Translates to: LWHRAICIQQGPRCLDGLYCHCR*GTSAWC Trigger: ACACCAGGCGGAAGTTCCTCATCTACAGTGGCAGTA...AAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | AGCTGGGAACCCTGCTGGGCCAGCCATACCTGCAGCAAGACCCCTTTCTGCCACAGGAAGCGCAGGATATaGTCGTCTTTGGGGATCTTG | + |
Preference number: 4 (lower is better) Translates to: SWEPCWASHTCSKTPFCHRKRRI*SSLGIL Trigger: CAAGATCCCCAAAGACGAGCATATCCTGCGCTTCCT...GTGGCAGAAAGGGGTCTTGCTGCAGGTATGGCTGGCCCAGCAGGGTTCCCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | CGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATAGGAGATCCACCTGGTaGTGCTTCCGCCAGCTCAAG | + |
Preference number: 4 (lower is better) Translates to: RAICIQQGPRCLDGLRSHRRSTW*CFRQLK Trigger: CTTGAGCTGGCGGAAGCAGCACCAGGTGGATCTCCT...ATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | ACCCCAGCTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGAACAGAAAGAACGTGCTaGAGCAGAGCTTCCTCTCCT | + |
Preference number: 4 (lower is better) Translates to: TPAVAPRHLHPTGSQVSRTERTC*SRASSP Trigger: AGGAGAGGAAGCTCTGCTGCAGCACGTTCTTTCTGT...TCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAGCTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | ACCCCAGCTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGACAGTGTACTGCTTCATaGCGATCTTCTCCAACGTGC | + |
Preference number: 4 (lower is better) Translates to: TPAVAPRHLHPTGSQVSRQCTAS*RSSPTC Trigger: GCACGTTGGAGAAGATCGCCATGAAGCAGTACACTG...TCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAGCTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR TCA 90 bp | GCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTTCAGGACGTTTCTCTaGATGAAGACCACGTGCTCC | + |
Preference number: 4 (lower is better) Translates to: APRHLHPTGSQVSRWASFFRTFL*MKTTCS Trigger: GGAGCACGTGGTCTTCATTCAGAGAAACGTCCTGAA...GAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR TCA 90 bp | CGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATTCCTCTCAGGGGAACTGTaGATCTGCCACTGGAGCAGG | + |
Preference number: 4 (lower is better) Translates to: RHLHPTGSQVSRWASFSFLSGEL*ICHWSR Trigger: CCTGCTCCAGTGGCAGATTCACAGTTCCCCTGAGAG...GAATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | TTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCAGGTCCCCAGCATCTCTCAATGTAGTCTaGATCCAGCTTGTCCCCATC | + |
Preference number: 4 (lower is better) Translates to: FSTPPDARSSQAASRSPASLNVV*IQLVPI Trigger: GATGGGGACAAGCTGGATGCAGACTACATTGAGAGA...TGCTGGGGACCTGCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | GCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCCTTGGGTGCCTGCTTTaGATGGTACAGACTGAACAC | + |
Preference number: 4 (lower is better) Translates to: APRHLHPTGSQVSRWASFLGCLL*MVQTEH Trigger: GTGTTCAGTCTGTACCATGCAAAGCAGGCACCCAAG...GAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | GCAGCCTCTCAGCAGGGAGAGGGTGTGAGGCAAGTGTGCAAAGAGATGTTGAGTCCGGCAGATGAGGGGTaGCTCTACACGGCTGTAATC | + |
Preference number: 4 (lower is better) Translates to: AASQQGEGVRQVCKEMLSPADEG*LYTAVI Trigger: GATTACAGCCGTGTAGAGGCACCCCTCATCTGCCGG...ACTCAACATCTCTTTGCACACTTGCCTCACACCCTCTCCCTGCTGAGAGGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | CATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATTCTCACGGGCCTTGTCCAGGTaGAAGTCTCGTGCCCTCAGG | + |
Preference number: 4 (lower is better) Translates to: HLHPTGSQVSRWASFSFSRALSR*KSRALR Trigger: CCTGAGGGCACGAGACTTCCACCTGGACAAGGCCCG...TGAGAATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | CGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATTCAGAAGGAGATCCACCTaGTGCTGCTTCCGCCAGCTC | + |
Preference number: 4 (lower is better) Translates to: RHLHPTGSQVSRWASFSFRRRST*CCFRQL Trigger: GAGCTGGCGGAAGCAGCACCAGGTGGATCTCCTTCT...GAATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | TTCTCATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCAGGTCCTCAGATAGAGGGACTTaGGGACCATCCCTCCTTCTG | + |
Preference number: 4 (lower is better) Translates to: FSFSTPPDARSSQAASRSSDRGT*GPSLLL Trigger: CAGAAGGAGGGATGGTCCCCAAGTCCCTCTATCTGA...GGACCTGCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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3UTR CAA 72 bp | GACAAGAATGGCTGGAGTCACCCCATCACCCCATCATaGCCTGGAACTAGGCAGAAGCCCTGGGCTTCCCTA | + |
Preference number: 4 (lower is better) Translates to: DKNGWSHPITPS*PGTRQKPWASL Trigger: TAGGGAAGCCCAGGGCTTCTGCCTAGTTCCAGGCAATGATGGGGTGATGGGGTGACTCCAGCCATTCTTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR TCA 90 bp | TTTGAAGCTGCCATCAGCAGCCTCTCAGCAGGGAGAGGGTGTGAGGCAAGTGTGTACTGCCACTGTAGATaGGGAACTTCCGCCTGGTGT | + |
Preference number: 4 (lower is better) Translates to: FEAAISSLSAGRGCEASVYCHCR*GTSAWC Trigger: ACACCAGGCGGAAGTTCCTCATCTACAGTGGCAGTA...CACACTTGCCTCACACCCTCTCCCTGCTGAGAGGCTGCTGATGGCAGCTTCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR TCA 90 bp | CGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATACACCACATCCCCTCTaGGGATATCAAAGTCCCAGG | + |
Preference number: 4 (lower is better) Translates to: RAICIQQGPRCLDGLRSHTPHPL*GYQSPR Trigger: CCTGGGACTTTGATATCCTCAGAGGGGATGTGGTGT...ATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR TCA 90 bp | CATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATTCTCAGTAACATGGGAGCCCTaGATGCTCTGCCCTTCCCGG | + |
Preference number: 4 (lower is better) Translates to: HLHPTGSQVSRWASFSFSVTWEP*MLCPSR Trigger: CCGGGAAGGGCAGAGCATTCAGGGCTCCCATGTTAC...TGAGAATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | GAAAGGCCGTGGACAGCTTGGCAGGCCCTTCTATGGGATATTTTGTGCACGTGTCAGGTGGAAGTCTCGTaGCCTCAGGAAGCGCAGGAT | + |
Preference number: 4 (lower is better) Translates to: ERPWTAWQALLWDILCTCQVEVS*PQEAQD Trigger: ATCCTGCGCTTCCTGAGGGCACGAGACTTCCACCTG...ACACGTGCACAAAATATCCCATAGAAGGGCCTGCCAAGCTGTCCACGGCCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | GAAAGGCCGTGGACAGCTTGGCAGGCCCTTCTATGGGATATTTTGTGCACGTGTAGATCCACCTGGTGCTaGTTCCGCCAGCTCAAGGAC | + |
Preference number: 4 (lower is better) Translates to: ERPWTAWQALLWDILCTCRSTWC*FRQLKD Trigger: GTCCTTGAGCTGGCGGAAGCAGCACCAGGTGGATCT...ACACGTGCACAAAATATCCCATAGAAGGGCCTGCCAAGCTGTCCACGGCCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | GAAAGGCCGTGGACAGCTTGGCAGGCCCTTCTATGGGATATTTTGTGCACGTGTTGTAGCTGGTCAGCCTaGTCCTGCTCCTCCTCTGTC | + |
Preference number: 4 (lower is better) Translates to: ERPWTAWQALLWDILCTCCSWSA*SCSSSV Trigger: GACAGAGGAGGAGCAGGAGCAGGCTGACCAGCTACA...ACACGTGCACAAAATATCCCATAGAAGGGCCTGCCAAGCTGTCCACGGCCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | ATGAAGTCCATGCTTGCTCACTGGGCCCCACAGCCAGAAACCACCCCTCTCAGCCAGTGTACTGCTTCATaGCGATCTTCTCCAACGTGC | + |
Preference number: 4 (lower is better) Translates to: MKSMLAHWAPQPETTPLSQCTAS*RSSPTC Trigger: GCACGTTGGAGAAGATCGCCATGAAGCAGTACACTG...GCTGAGAGGGGTGGTTTCTGGCTGTGGGGCCCAGTGAGCAAGCATGGACTTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | CATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCAGGTCCCCAGATGTGGGATGTTCCCTaGGAAATGAGCTCATTCAGA | + |
Preference number: 4 (lower is better) Translates to: HSQRHLMPEARRLPAGPQMWDVP*EMSSFR Trigger: TCTGAATGAGCTCATTTCCCAGGGAACATCCCACAT...CTGGGGACCTGCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | CCAGCTTGTGCTAGATACACTGGCACACACCAGCAGCCTCTAAATCTGAGAGGCACCATCGAGCCACTGTaGGACTGGCCAGAGGAGGAA | + |
Preference number: 4 (lower is better) Translates to: PACARYTGTHQQPLNLRGTIEPL*DWPEEE Trigger: TTCCTCCTCTGGCCAGTCCCACAGTGGCTCGATGGT...GCCTCTCAGATTTAGAGGCTGCTGGTGTGTGCCAGTGTATCTAGCACAAGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR TCA 90 bp | CGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATTCGGACGTTTCTCTGAATaGAGACCACGTGCTCCACAC | + |
Preference number: 4 (lower is better) Translates to: RHLHPTGSQVSRWASFSFGRFSE*RPRAPH Trigger: GTGTGGAGCACGTGGTCTTCATTCAGAGAAACGTCC...GAATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | TTCTCATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCAGGTCCACATTGGCAGTGTACTaGTTCATGGCGATCTTCTCC | + |
Preference number: 4 (lower is better) Translates to: FSFSTPPDARSSQAASRSTLAVY*FMAIFS Trigger: GGAGAAGATCGCCATGAAGCAGTACACTGCCAATGT...GGACCTGCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATGAGAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | CGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATCGTCTTTGGGGATCTTaGCTTTGTGGGTCTCCTGTA | + |
Preference number: 4 (lower is better) Translates to: RAICIQQGPRCLDGLRSHRLWGS*LCGSPV Trigger: TACAGGAGACCCACAAAGGCAAGATCCCCAAAGACG...ATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | CATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATTCTCACAGGTGGAAGTCTCGTaGCCTCAGGAAGCGCAGGAT | + |
Preference number: 4 (lower is better) Translates to: HLHPTGSQVSRWASFSFSQVEVS*PQEAQD Trigger: ATCCTGCGCTTCCTGAGGGCACGAGACTTCCACCTG...TGAGAATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | GCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCCATGACCAGCTCGAATaGATACTTGTATACTCGGAC | + |
Preference number: 4 (lower is better) Translates to: APRHLHPTGSQVSRWASFHDQLE*ILVYSD Trigger: GTCCGAGTATACAAGTATCCATTCGAGCTGGTCATG...GAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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3UTR CAA 72 bp | GTCTCCAGGAAGGCCCACTACTCCCCCTTGGAGCGTTaGGGAAAGTCATATCAGTCTTGGAGAAAGTCCCTG | + |
Preference number: 4 (lower is better) Translates to: VSRKAHYSPLER*GKSYQSWRKSL Trigger: CAGGGACTTTCTCCAAGACTGATATGACTTTCCCAAACGCTCCAAGGGGGAGTAGTGGGCCTTCCTGGAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | CAAAACAAAAACAATCACCACAGAAATGGACCGTGCAGTGGCTCGGTGGTAGTGCTCCACTGCTGTAGCTaGTCAGCCTGCTCCTGCTCC | + |
Preference number: 4 (lower is better) Translates to: QNKNNHHRNGPCSGSVVVLHCCS*SACSCS Trigger: GGAGCAGGAGCAGGCTGACCAGCTACAGCAGTGGAG...CACTACCACCGAGCCACTGCACGGTCCATTTCTGTGGTGATTGTTTTTGTTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | GCATCTGGCTTTTTACATGGCTGCTGGGGATCCAAACTCGGGATATCATGCTTGCAATCAGCTGCCCACTaGCTCTCACTCCAGGCTCCT | + |
Preference number: 4 (lower is better) Translates to: ASGFLHGCWGSKLGISCLQSAAH*LSLQAP Trigger: AGGAGCCTGGAGTGAGAGCCAGTGGGCAGCTGATTG...CAAGCATGATATCCCGAGTTTGGATCCCCAGCAGCCATGTAAAAAGCCAGATGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR CAA 72 bp | GAAGTCTTGGTCTCCAGGAAGGCCCACTACTCCCCCTaGGAGCGTTTGGGAAAGTCATATCAGTCTTGGAGA | + |
Preference number: 4 (lower is better) Translates to: EVLVSRKAHYSP*ERLGKSYQSWR Trigger: TCTCCAAGACTGATATGACTTTCCCAAACGCTCCAAGGGGGAGTAGTGGGCCTTCCTGGAGACCAAGACTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | CGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATTCTCTCTCAATGTAGTCTaGATCCAGCTTGTCCCCATC | + |
Preference number: 4 (lower is better) Translates to: RHLHPTGSQVSRWASFSFSLNVV*IQLVPI Trigger: GATGGGGACAAGCTGGATGCAGACTACATTGAGAGA...GAATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | GCTTCGTTCTCATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCCCTAAAGTCTTCAGATaGCAGCACTTCACAGTAGTA | + |
Preference number: 4 (lower is better) Translates to: ASFSFSTPPDARSSQAASPKVFR*QHFTVV Trigger: TACTACTGTGAAGTGCTGGCATCTGAAGACTTTAGG...GCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATGAGAACGAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | GAGGTAGAACATCCGGAAGTCTCGGCTTTTAAAAGAAAGTCAGAAGTAAAGGGTCGGACGTCCTCCTCCTaGACTGGGGCTGGTGTCCAG | + |
Preference number: 4 (lower is better) Translates to: EVEHPEVSAFKRKSEVKGRTSSS*TGAGVQ Trigger: CTGGACACCAGCCCCAGTCCAGGAGGAGGACGTCCG...ACCCTTTACTTCTGACTTTCTTTTAAAAGCCGAGACTTCCGGATGTTCTACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | CATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATTCTCAGGGATCTTGCCTTTGTaGGTCTCCTGTAACCAGTGC | + |
Preference number: 4 (lower is better) Translates to: HLHPTGSQVSRWASFSFSGILPL*VSCNQC Trigger: GCACTGGTTACAGGAGACCCACAAAGGCAAGATCCC...TGAGAATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | AAACGCCAAAGAAAGACTGAGACTGGCCAAAAGTCAACAACAAACAGTGACCACCGGGCCTTGTCCAGGTaGAAGTCTCGTGCCCTCAGG | + |
Preference number: 4 (lower is better) Translates to: KRQRKTETGQKSTTNSDHRALSR*KSRALR Trigger: CCTGAGGGCACGAGACTTCCACCTGGACAAGGCCCG...GTGGTCACTGTTTGTTGTTGACTTTTGGCCAGTCTCAGTCTTTCTTTGGCGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | CCAGCTTGTGCTAGATACACTGGCACACACCAGCAGCCTCTAAATCTGAGAGGCGGTGCCTGCTTTGCATaGTACAGACTGAACACCACA | + |
Preference number: 4 (lower is better) Translates to: PACARYTGTHQQPLNLRGGACFA*YRLNTT Trigger: TGTGGTGTTCAGTCTGTACCATGCAAAGCAGGCACC...GCCTCTCAGATTTAGAGGCTGCTGGTGTGTGCCAGTGTATCTAGCACAAGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | CTGCACGAGGTTTCACAGCTAGTGAAAGAAAGGCTGGGGTTTCAAGGATATAGAACAGCAGCTTGCACTTaGGGCCAGGGCTGTGCAGAG | + |
Preference number: 4 (lower is better) Translates to: LHEVSQLVKERLGFQGYRTAACT*GQGCAE Trigger: CTCTGCACAGCCCTGGCCCCAAGTGCAAGCTGCTGT...TCTATATCCTTGAAACCCCAGCCTTTCTTTCACTAGCTGTGAAACCTCGTGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR TCA 90 bp | GCATCTGGCTTTTTACATGGCTGCTGGGGATCCAAACTCGGGATATCATGCTTGACACCACATCCCCTCTaGGGATATCAAAGTCCCAGG | + |
Preference number: 4 (lower is better) Translates to: ASGFLHGCWGSKLGISCLTPHPL*GYQSPR Trigger: CCTGGGACTTTGATATCCTCAGAGGGGATGTGGTGT...CAAGCATGATATCCCGAGTTTGGATCCCCAGCAGCCATGTAAAAAGCCAGATGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | CGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATCGATCTTCTCCAACGTaGTTTCAAAGCCAAAGAAAG | + |
Preference number: 4 (lower is better) Translates to: RAICIQQGPRCLDGLRSHRSSPT*FQSQRK Trigger: CTTTCTTTGGCTTTGAAAGCACGTTGGAGAAGATCG...ATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | CAGCCCTGGTCCCATCCTAGACTCCAGATCCAGGGGACAAGAGGTAGAACATCCCCTAAAGTCTTCAGATaGCAGCACTTCACAGTAGTA | + |
Preference number: 4 (lower is better) Translates to: QPWSHPRLQIQGTRGRTSPKVFR*QHFTVV Trigger: TACTACTGTGAAGTGCTGGCATCTGAAGACTTTAGG...GGATGTTCTACCTCTTGTCCCCTGGATCTGGAGTCTAGGATGGGACCAGGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR CAA 72 bp | CTCCCCCTTGGAGCGTTTGGGAAAGTCATATCAGTCTaGGAGAAAGTCCCTGAGTCAGATCAGTTCCAGGAT | + |
Preference number: 4 (lower is better) Translates to: LPLGAFGKVISV*EKVPESDQFQD Trigger: ATCCTGGAACTGATCTGACTCAGGGACTTTCTCCAAGACTGATATGACTTTCCCAAACGCTCCAAGGGGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | CAAAACAAAAACAATCACCACAGAAATGGACCGTGCAGTGGCTCGGTGGTAGTGCGTCTTTGGGGATCTTaGCTTTGTGGGTCTCCTGTA | + |
Preference number: 4 (lower is better) Translates to: QNKNNHHRNGPCSGSVVVRLWGS*LCGSPV Trigger: TACAGGAGACCCACAAAGGCAAGATCCCCAAAGACG...CACTACCACCGAGCCACTGCACGGTCCATTTCTGTGGTGATTGTTTTTGTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR CCA 90 bp | AAACGCCAAAGAAAGACTGAGACTGGCCAAAAGTCAACAACAAACAGTGACCACGTCCAGCGGGGAATGTaGGATGTTCCCTGGGAAATG | + |
Preference number: 4 (lower is better) Translates to: KRQRKTETGQKSTTNSDHVQRGM*DVPWEM Trigger: CATTTCCCAGGGAACATCCCACATTCCCCGCTGGAC...GTGGTCACTGTTTGTTGTTGACTTTTGGCCAGTCTCAGTCTTTCTTTGGCGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | AAACGCCAAAGAAAGACTGAGACTGGCCAAAAGTCAACAACAAACAGTGACCACACAGAAAGAACGTGCTaGAGCAGAGCTTCCTCTCCT | + |
Preference number: 4 (lower is better) Translates to: KRQRKTETGQKSTTNSDHTERTC*SRASSP Trigger: AGGAGAGGAAGCTCTGCTGCAGCACGTTCTTTCTGT...GTGGTCACTGTTTGTTGTTGACTTTTGGCCAGTCTCAGTCTTTCTTTGGCGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR GCA 90 bp | TACATGCTATGCCTCAATCCTAATTTCTACATGGTAAGCCACTCTCTAGGCAAACTTGGGTGCCTGCTTTaGATGGTACAGACTGAACAC | + |
Preference number: 4 (lower is better) Translates to: YMLCLNPNFYMVSHSLGKLGCLL*MVQTEH Trigger: GTGTTCAGTCTGTACCATGCAAAGCAGGCACCCAAG...TTTGCCTAGAGAGTGGCTTACCATGTAGAAATTAGGATTGAGGCATAGCATGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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3UTR CAA 72 bp | TCATTGAAAATATCACTAATTGCTGCTCGTGGTGATTaGGAGACAACTGGTTTTCAATGTCTCTCTAGAGGA | + |
Preference number: 4 (lower is better) Translates to: SLKISLIAARGD*ETTGFQCLSRG Trigger: TCCTCTAGAGAGACATTGAAAACCAGTTGTCTCCAAATCACCACGAGCAGCAATTAGTGATATTTTCAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS GCA 90 bp | CACCAGCAATCTTCCGCAGCAGCCGCGGGGCATCCACTCGCAGCCTaGAGCTCCGCTCCACGGTGTGCACTGCCCCATCTGTGCTCCGCC | + |
Preference number: 5 (lower is better) Translates to: HQQSSAAAAGHPLAA*SSAPRCALPHLCSA Trigger: GGCGGAGCACAGATGGGGCAGTGCACACCGTGGAGCGGAGCTGCAGGCTGCGAGTGGATGCCCCGCGGCTGCTGCGGAAGATTGCTGGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS CCA 90 bp | CTGGGACCCTCCATGTCCAGGGAGCTAGGGCACTGGGGCACAAGCTaGCTGCGGACGTCCTCCTCCTGGACTGGGGCTGGTGTCCAGCGG | + |
Preference number: 5 (lower is better) Translates to: LGPSMSRELGHWGTS*LRTSSSWTGAGVQR Trigger: CCGCTGGACACCAGCCCCAGTCCAGGAGGAGGACGTCCGCAGCCAGCTTGTGCCCCAGTGCCCTAGCTCCCTGGACATGGAGGGTCCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS CCA 90 bp | CCTGGGGCATCACTGGGACCCTCCATGTCCAGGGAGCTAGGGCACTaGGGCACAAGCTGGCTGCGGACGTCCTCCTCCTGGACTGGGGCT | + |
Preference number: 5 (lower is better) Translates to: PGASLGPSMSRELGH*GTSWLRTSSSWTGA Trigger: AGCCCCAGTCCAGGAGGAGGACGTCCGCAGCCAGCTTGTGCCCCAGTGCCCTAGCTCCCTGGACATGGAGGGTCCCAGTGATGCCCCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS GCA 90 bp | GGGGGAGGGGGCCGCCAGGTCTGCAGAAGGAGATCCACCTGGTGCTaGTTCCGCCAGCTCAAGGACTGGCACAACATGTCCCGGGCCTTG | + |
Preference number: 5 (lower is better) Translates to: GGGGRQVCRRRSTWC*FRQLKDWHNMSRAL Trigger: CAAGGCCCGGGACATGTTGTGCCAGTCCTTGAGCTGGCGGAAGCAGCACCAGGTGGATCTCCTTCTGCAGACCTGGCGGCCCCCTCCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS GCA 90 bp | CTCGCAGCCTGCAGCTCCGCTCCACGGTGTGCACTGCCCCATCTGTaGTCCGCCACTCGCCCAGGACTTCACTCCCCAGAAAGACTGGGA | + |
Preference number: 5 (lower is better) Translates to: LAACSSAPRCALPHL*SATRPGLHSPERLG Trigger: TCCCAGTCTTTCTGGGGAGTGAAGTCCTGGGCGAGTGGCGGAGCACAGATGGGGCAGTGCACACCGTGGAGCGGAGCTGCAGGCTGCGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS CCA 90 bp | AGGGCACTGGGGCACAAGCTGGCTGCGGACGTCCTCCTCCTGGACTaGGGCTGGTGTCCAGCGGGGAATGTGGGATGTTCCCTGGGAAAT | + |
Preference number: 5 (lower is better) Translates to: RALGHKLAADVLLLD*GWCPAGNVGCSLGN Trigger: ATTTCCCAGGGAACATCCCACATTCCCCGCTGGACACCAGCCCCAGTCCAGGAGGAGGACGTCCGCAGCCAGCTTGTGCCCCAGTGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CAA 90 bp | CGTGAAGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCCACAAATGCCGCATGTaGAGGCCCTCCAGGTCCAGC | + |
Preference number: 5 (lower is better) Translates to: REAKLPLHSGSLPWDHHTHKCRM*RPSRSS Trigger: GCTGGACCTGGAGGGCCTCAACATGCGGCATTTGTG...GGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCTTCACG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CAA 90 bp | CGTGAAGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCTCCTGGGGACTGAGCTaGGGTGCCTGCTTTGCATGG | + |
Preference number: 5 (lower is better) Translates to: REAKLPLHSGSLPWDHHTSWGLS*GACFAW Trigger: CCATGCAAAGCAGGCACCCAAGCTCAGTCCCCAGGA...GGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCTTCACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS CCA 90 bp | CTTGGGGCCAGGGCTGTGCAGAGCCGTCAGGACGTCATCCACACCTaGGAGACTGCAGGCCACACTCTCAGGGGAACTGTGAATCTGCCA | + |
Preference number: 5 (lower is better) Translates to: LGARAVQSRQDVIHT*ETAGHTLRGTVNLP Trigger: TGGCAGATTCACAGTTCCCCTGAGAGTGTGGCCTGCAGTCTCCCAGGTGTGGATGACGTCCTGACGGCTCTGCACAGCCCTGGCCCCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CAA 90 bp | CATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCAGGTCCCCAGTCCTGGGGACTGAGCTaGGGTGCCTGCTTTGCATGG | + |
Preference number: 5 (lower is better) Translates to: HSQRHLMPEARRLPAGPQSWGLS*GACFAW Trigger: CCATGCAAAGCAGGCACCCAAGCTCAGTCCCCAGGA...CTGGGGACCTGCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS CCA 90 bp | TGCAGAAGGAGATCCACCTGGTGCTGCTTCCGCCAGCTCAAGGACTaGCACAACATGTCCCGGGCCTTGTCCAGGTGGAAGTCTCGTGCC | + |
Preference number: 5 (lower is better) Translates to: CRRRSTWCCFRQLKD*HNMSRALSRWKSRA Trigger: GGCACGAGACTTCCACCTGGACAAGGCCCGGGACATGTTGTGCCAGTCCTTGAGCTGGCGGAAGCAGCACCAGGTGGATCTCCTTCTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CAA 90 bp | AGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCCCAGCTCGTCTTTGGGGATCTaGCCTTTGTGGGTCTCCTGT | + |
Preference number: 5 (lower is better) Translates to: SEAPSALWVPAVGSPHPSSSLGI*PLWVSC Trigger: ACAGGAGACCCACAAAGGCAAGATCCCCAAAGACGA...GCTGGGGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CAA 90 bp | TCAAGAGCCGTGAAGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCAACATGTCCCGGGCCTaGTCCAGGTGGAAGTCTCGT | + |
Preference number: 5 (lower is better) Translates to: SRAVKRSSLCTLGPCRGINMSRA*SRWKSR Trigger: ACGAGACTTCCACCTGGACAAGGCCCGGGACATGTT...GATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCTTCACGGCTCTTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CAA 90 bp | CGTGAAGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCCGCCTGGTGTTCTCATaGATGAAGGGGCTGACCAGT | + |
Preference number: 5 (lower is better) Translates to: REAKLPLHSGSLPWDHHTRLVFS*MKGLTS Trigger: ACTGGTCAGCCCCTTCATCAATGAGAACACCAGGCG...GGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCTTCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS GCA 90 bp | ACCTCGATCATCCGCAGTAGGGCTTTCACTCCAGGTCGCCACAAATaGCGCATGTTGAGGCCCTCCAGGTCCAGCAAGCAGGTCCAGGAG | + |
Preference number: 5 (lower is better) Translates to: TSIIRSRAFTPGRHK*RMLRPSRSSKQVQE Trigger: CTCCTGGACCTGCTTGCTGGACCTGGAGGGCCTCAACATGCGGCATTTGTGGCGACCTGGAGTGAAAGCCCTACTGCGGATGATCGAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS GCA 90 bp | CTGCCCACTGGCTCTCACTCCAGGCTCCTGGGGACTGAGCTTGGGTaGCTGCTTTGCATGGTACAGACTGAACACCACATCCCCTCTGAG | + |
Preference number: 5 (lower is better) Translates to: LPTGSHSRLLGTELG*LLCMVQTEHHIPSE Trigger: CTCAGAGGGGATGTGGTGTTCAGTCTGTACCATGCAAAGCAGGCACCCAAGCTCAGTCCCCAGGAGCCTGGAGTGAGAGCCAGTGGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS GCA 90 bp | AACATGGGAGCCCTGAATGCTCTGCCCTTCCCGGCAGATGAGGGGTaGCTCTACACGGCTGTAATCCACCCCCAGGATCCAGCTCTTGTC | + |
Preference number: 5 (lower is better) Translates to: NMGALNALPFPADEG*LYTAVIHPQDPALV Trigger: GACAAGAGCTGGATCCTGGGGGTGGATTACAGCCGTGTAGAGGCACCCCTCATCTGCCGGGAAGGGCAGAGCATTCAGGGCTCCCATGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS CCA 90 bp | CGCCAGCTCAAGGACTGGCACAACATGTCCCGGGCCTTGTCCAGGTaGAAGTCTCGTGCCCTCAGGAAGCGCAGGATATGCTCGTCTTTG | + |
Preference number: 5 (lower is better) Translates to: RQLKDWHNMSRALSR*KSRALRKRRICSSL Trigger: CAAAGACGAGCATATCCTGCGCTTCCTGAGGGCACGAGACTTCCACCTGGACAAGGCCCGGGACATGTTGTGCCAGTCCTTGAGCTGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CAA 90 bp | GCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCCCCAGGATCCAGCTCTaGTCAATCAGCTGCCCACTG | + |
Preference number: 5 (lower is better) Translates to: APRHLHPTGSQVSRWASFPRIQL*SISCPL Trigger: CAGTGGGCAGCTGATTGACAAGAGCTGGATCCTGGG...GAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CAA 90 bp | CTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGCCTGGTGTTCTCATaGATGAAGGGGCTGACCAGT | + |
Preference number: 5 (lower is better) Translates to: LWHRAICIQQGPRCLDGLRLVFS*MKGLTS Trigger: ACTGGTCAGCCCCTTCATCAATGAGAACACCAGGCG...AAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS GCA 90 bp | CCACTGGCTCTCACTCCAGGCTCCTGGGGACTGAGCTTGGGTGCCTaGTTTGCATGGTACAGACTGAACACCACATCCCCTCTGAGGATA | + |
Preference number: 5 (lower is better) Translates to: PLALTPGSWGLSLGA*FAWYRLNTTSPLRI Trigger: TATCCTCAGAGGGGATGTGGTGTTCAGTCTGTACCATGCAAAGCAGGCACCCAAGCTCAGTCCCCAGGAGCCTGGAGTGAGAGCCAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS CCA 90 bp | GACATCTCTCAATGTAGTCTGCATCCAGCTTGTCCCCATCCGCTATaGCCATCTCAGAAGCAGGGCCTGGGGCATCACTGGGACCCTCCA | + |
Preference number: 5 (lower is better) Translates to: DISQCSLHPACPHPL*PSQKQGLGHHWDPP Trigger: TGGAGGGTCCCAGTGATGCCCCAGGCCCTGCTTCTGAGATGGCCATAGCGGATGGGGACAAGCTGGATGCAGACTACATTGAGAGATGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS CCA 90 bp | AGTCTTCAGATGCCAGCACTTCACAGTAGTACAGCAGCTTGCACTTaGGGCCAGGGCTGTGCAGAGCCGTCAGGACGTCATCCACACCTG | + |
Preference number: 5 (lower is better) Translates to: SLQMPALHSSTAACT*GQGCAEPSGRHPHL Trigger: CAGGTGTGGATGACGTCCTGACGGCTCTGCACAGCCCTGGCCCCAAGTGCAAGCTGCTGTACTACTGTGAAGTGCTGGCATCTGAAGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CAA 90 bp | ACACCCCAGCTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTATTCCCCCTCTTGACATaGGCAGTGTACTGCTTCATG | + |
Preference number: 5 (lower is better) Translates to: TPQLWHRAICIQQGPRCLFPLLT*AVYCFM Trigger: CATGAAGCAGTACACTGCCAATGTCAAGAGGGGGAA...TAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAGCTGGGGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CAA 90 bp | TTCTCATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCAGGTCCACCTCCTTCCCCCTCTaGACATTGGCAGTGTACTGC | + |
Preference number: 5 (lower is better) Translates to: FSFSTPPDARSSQAASRSTSFPL*TLAVYC Trigger: GCAGTACACTGCCAATGTCAAGAGGGGGAAGGAGGT...GGACCTGCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATGAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CAA 90 bp | CGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATTCCACAAATGCCGCATGTaGAGGCCCTCCAGGTCCAGC | + |
Preference number: 5 (lower is better) Translates to: RHLHPTGSQVSRWASFSFHKCRM*RPSRSS Trigger: GCTGGACCTGGAGGGCCTCAACATGCGGCATTTGTG...GAATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS CCA 90 bp | CTGGTATCTCCATGGCAACCTCATAGGGGGTCCCTCGGAGCACACTaGCAGAATGGTAGGTTTCACTCCACTGCTGTAGCTGGTCAGCCT | + |
Preference number: 5 (lower is better) Translates to: LVSPWQPHRGSLGAH*QNGRFHSTAVAGQP Trigger: AGGCTGACCAGCTACAGCAGTGGAGTGAAACCTACCATTCTGCCAGTGTGCTCCGAGGGACCCCCTATGAGGTTGCCATGGAGATACCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CAA 90 bp | TCAAGAGCCGTGAAGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCTTCTGTCCTTCCTCATaGACAGAAAGAACGTGCTGC | + |
Preference number: 5 (lower is better) Translates to: SRAVKRSSLCTLGPCRGIFCPSS*TERTCC Trigger: GCAGCACGTTCTTTCTGTCAATGAGGAAGGACAGAA...GATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCTTCACGGCTCTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS TCA 90 bp | CTATCAGCAGCGTTCTCTCTCTCCAGTTCAGGACGTTTCTCTGAATaGAGACCACGTGCTCCACACCAGCAATCTTCCGCAGCAGCCGCG | + |
Preference number: 5 (lower is better) Translates to: LSAAFSLSSSGRFSE*RPRAPHQQSSAAAA Trigger: CGCGGCTGCTGCGGAAGATTGCTGGTGTGGAGCACGTGGTCTTCATTCAGAGAAACGTCCTGAACTGGAGAGAGAGAACGCTGCTGATAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS GCA 90 bp | CTCCTGCATGGGACTGAGATGGCCCAGACATCTCTCAATGTAGTCTaGATCCAGCTTGTCCCCATCCGCTATGGCCATCTCAGAAGCAGG | + |
Preference number: 5 (lower is better) Translates to: LLHGTEMAQTSLNVV*IQLVPIRYGHLRSR Trigger: CCTGCTTCTGAGATGGCCATAGCGGATGGGGACAAGCTGGATGCAGACTACATTGAGAGATGTCTGGGCCATCTCAGTCCCATGCAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS GCA 90 bp | GGCTCTCACTCCAGGCTCCTGGGGACTGAGCTTGGGTGCCTGCTTTaGATGGTACAGACTGAACACCACATCCCCTCTGAGGATATCAAA | + |
Preference number: 5 (lower is better) Translates to: GSHSRLLGTELGCLL*MVQTEHHIPSEDIK Trigger: TTTGATATCCTCAGAGGGGATGTGGTGTTCAGTCTGTACCATGCAAAGCAGGCACCCAAGCTCAGTCCCCAGGAGCCTGGAGTGAGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS CCA 90 bp | CTCACTCCAGGCTCCTGGGGACTGAGCTTGGGTGCCTGCTTTGCATaGTACAGACTGAACACCACATCCCCTCTGAGGATATCAAAGTCC | + |
Preference number: 5 (lower is better) Translates to: LTPGSWGLSLGACFA*YRLNTTSPLRISKS Trigger: GGACTTTGATATCCTCAGAGGGGATGTGGTGTTCAGTCTGTACCATGCAAAGCAGGCACCCAAGCTCAGTCCCCAGGAGCCTGGAGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CAA 90 bp | GCTTCGTTCTCATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCTTCCCCCTCTTGACATaGGCAGTGTACTGCTTCATG | + |
Preference number: 5 (lower is better) Translates to: ASFSFSTPPDARSSQAASFPLLT*AVYCFM Trigger: CATGAAGCAGTACACTGCCAATGTCAAGAGGGGGAA...GCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATGAGAACGAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CAA 90 bp | GTCTTGGTCTCCAGGAAGGCCCACTACTCCCCCTTGGAGCGTTTGGGAAAGTCATTGGGGATCTTGCCTTaGTGGGTCTCCTGTAACCAG | + |
Preference number: 5 (lower is better) Translates to: VLVSRKAHYSPLERLGKSLGILP*WVSCNQ Trigger: CTGGTTACAGGAGACCCACAAAGGCAAGATCCCCAA...TGACTTTCCCAAACGCTCCAAGGGGGAGTAGTGGGCCTTCCTGGAGACCAAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR CAA 90 bp | CCAGCTTGTGCTAGATACACTGGCACACACCAGCAGCCTCTAAATCTGAGAGGCAACATGTCCCGGGCCTaGTCCAGGTGGAAGTCTCGT | + |
Preference number: 5 (lower is better) Translates to: PACARYTGTHQQPLNLRGNMSRA*SRWKSR Trigger: ACGAGACTTCCACCTGGACAAGGCCCGGGACATGTT...GCCTCTCAGATTTAGAGGCTGCTGGTGTGTGCCAGTGTATCTAGCACAAGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR CAA 90 bp | GAAAGGCCGTGGACAGCTTGGCAGGCCCTTCTATGGGATATTTTGTGCACGTGTCCCAGGATCCAGCTCTaGTCAATCAGCTGCCCACTG | + |
Preference number: 5 (lower is better) Translates to: ERPWTAWQALLWDILCTCPRIQL*SISCPL Trigger: CAGTGGGCAGCTGATTGACAAGAGCTGGATCCTGGG...ACACGTGCACAAAATATCCCATAGAAGGGCCTGCCAAGCTGTCCACGGCCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS TCA 90 bp | GCATCTATCAGCAGCGTTCTCTCTCTCCAGTTCAGGACGTTTCTCTaGATGAAGACCACGTGCTCCACACCAGCAATCTTCCGCAGCAGC | + |
Preference number: 5 (lower is better) Translates to: ASISSVLSLQFRTFL*MKTTCSTPAIFRSS Trigger: GCTGCTGCGGAAGATTGCTGGTGTGGAGCACGTGGTCTTCATTCAGAGAAACGTCCTGAACTGGAGAGAGAGAACGCTGCTGATAGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS TCA 90 bp | CGGCAGCTCTCCTTCACTGTCACTCGGCTCGCAAACGTCTCATTGTaGGCATCTATCAGCAGCGTTCTCTCTCTCCAGTTCAGGACGTTT | + |
Preference number: 5 (lower is better) Translates to: RQLSFTVTRLANVSL*ASISSVLSLQFRTF Trigger: AAACGTCCTGAACTGGAGAGAGAGAACGCTGCTGATAGATGCTCACAATGAGACGTTTGCGAGCCGAGTGACAGTGAAGGAGAGCTGCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS TCA 90 bp | GTAACCAGTGCCGAAGCTGAACCAGGCAACTCTCCTGCATGGGACTaGGATGGCCCAGACATCTCTCAATGTAGTCTGCATCCAGCTTGT | + |
Preference number: 5 (lower is better) Translates to: VTSAEAEPGNSPAWD*DGPDISQCSLHPAC Trigger: ACAAGCTGGATGCAGACTACATTGAGAGATGTCTGGGCCATCTCAGTCCCATGCAGGAGAGTTGCCTGGTTCAGCTTCGGCACTGGTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CAA 90 bp | CGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATAGCTCGAATGGATACTaGTATACTCGGACAGGAGAC | + |
Preference number: 5 (lower is better) Translates to: RAICIQQGPRCLDGLRSHSSNGY*YTRTGD Trigger: GTCTCCTGTCCGAGTATACAAGTATCCATTCGAGCT...ATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CAA 90 bp | GAAAGGCCGTGGACAGCTTGGCAGGCCCTTCTATGGGATATTTTGTGCACGTGTTCGTCTTTGGGGATCTaGCCTTTGTGGGTCTCCTGT | + |
Preference number: 5 (lower is better) Translates to: ERPWTAWQALLWDILCTCSSLGI*PLWVSC Trigger: ACAGGAGACCCACAAAGGCAAGATCCCCAAAGACGA...ACACGTGCACAAAATATCCCATAGAAGGGCCTGCCAAGCTGTCCACGGCCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR CAA 90 bp | CATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATTCTCATTGGGGATCTTGCCTTaGTGGGTCTCCTGTAACCAG | + |
Preference number: 5 (lower is better) Translates to: HLHPTGSQVSRWASFSFSLGILP*WVSCNQ Trigger: CTGGTTACAGGAGACCCACAAAGGCAAGATCCCCAA...TGAGAATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS-3UTR CAA 90 bp | GCGCAGCCAGCTTGTGCTAGATACACTGGCACACACCAGCAGCCTCTAAATCTGTTCTGTCCTTCCTCATaGACAGAAAGAACGTGCTGC | + |
Preference number: 5 (lower is better) Translates to: AQPACARYTGTHQQPLNLFCPSS*TERTCC Trigger: GCAGCACGTTCTTTCTGTCAATGAGGAAGGACAGAA...CAGATTTAGAGGCTGCTGGTGTGTGCCAGTGTATCTAGCACAAGCTGGCTGCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS-3UTR CAA 90 bp | GCATCTGGCTTTTTACATGGCTGCTGGGGATCCAAACTCGGGATATCATGCTTGAGCTCGAATGGATACTaGTATACTCGGACAGGAGAC | + |
Preference number: 5 (lower is better) Translates to: ASGFLHGCWGSKLGISCLSSNGY*YTRTGD Trigger: GTCTCCTGTCCGAGTATACAAGTATCCATTCGAGCT...CAAGCATGATATCCCGAGTTTGGATCCCCAGCAGCCATGTAAAAAGCCAGATGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230616.2 |
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CDS GCA 72 bp | GCATCCACTCGCAGCCTGCAGCTCCGCTCCACGGTGTaGACTGCCCCATCTGTGCTCCGCCACTCGCCCAGG | + |
Preference number: 6 (lower is better) Translates to: ASTRSLQLRSTV*TAPSVLRHSPR Trigger: CCTGGGCGAGTGGCGGAGCACAGATGGGGCAGTGCACACCGTGGAGCGGAGCTGCAGGCTGCGAGTGGATGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS GCA 72 bp | TCTTCCGCAGCAGCCGCGGGGCATCCACTCGCAGCCTaGAGCTCCGCTCCACGGTGTGCACTGCCCCATCTG | + |
Preference number: 6 (lower is better) Translates to: SSAAAAGHPLAA*SSAPRCALPHL Trigger: CAGATGGGGCAGTGCACACCGTGGAGCGGAGCTGCAGGCTGCGAGTGGATGCCCCGCGGCTGCTGCGGAAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS GCA 72 bp | CACTCGCAGCCTGCAGCTCCGCTCCACGGTGTGCACTaGCCCATCTGTGCTCCGCCACTCGCCCAGGACTTC | + |
Preference number: 6 (lower is better) Translates to: HSQPAAPLHGVH*PICAPPLAQDF Trigger: GAAGTCCTGGGCGAGTGGCGGAGCACAGATGGGGCAGTGCACACCGTGGAGCGGAGCTGCAGGCTGCGAGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS CCA 72 bp | GGGCACAAGCTGGCTGCGGACGTCCTCCTCCTGGACTaGGGCTGGTGTCCAGCGGGGAATGTGGGATGTTCC | + |
Preference number: 6 (lower is better) Translates to: GHKLAADVLLLD*GWCPAGNVGCS Trigger: GGAACATCCCACATTCCCCGCTGGACACCAGCCCCAGTCCAGGAGGAGGACGTCCGCAGCCAGCTTGTGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS CCA 72 bp | TCCATGTCCAGGGAGCTAGGGCACTGGGGCACAAGCTaGCTGCGGACGTCCTCCTCCTGGACTGGGGCTGGT | + |
Preference number: 6 (lower is better) Translates to: SMSRELGHWGTS*LRTSSSWTGAG Trigger: ACCAGCCCCAGTCCAGGAGGAGGACGTCCGCAGCCAGCTTGTGCCCCAGTGCCCTAGCTCCCTGGACATGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS CCA 72 bp | TCACTGGGACCCTCCATGTCCAGGGAGCTAGGGCACTaGGGCACAAGCTGGCTGCGGACGTCCTCCTCCTGG | + |
Preference number: 6 (lower is better) Translates to: SLGPSMSRELGH*GTSWLRTSSSW Trigger: CCAGGAGGAGGACGTCCGCAGCCAGCTTGTGCCCCAGTGCCCTAGCTCCCTGGACATGGAGGGTCCCAGTGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS GCA 72 bp | TGCAGCTCCGCTCCACGGTGTGCACTGCCCCATCTGTaGTCCGCCACTCGCCCAGGACTTCACTCCCCAGAA | + |
Preference number: 6 (lower is better) Translates to: CSSAPRCALPHL*SATRPGLHSPE Trigger: TTCTGGGGAGTGAAGTCCTGGGCGAGTGGCGGAGCACAGATGGGGCAGTGCACACCGTGGAGCGGAGCTGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS CCA 72 bp | GGAGGGGGCCGCCAGGTCTGCAGAAGGAGATCCACCTaGTGCTGCTTCCGCCAGCTCAAGGACTGGCACAAC | + |
Preference number: 6 (lower is better) Translates to: GGGRQVCRRRST*CCFRQLKDWHN Trigger: GTTGTGCCAGTCCTTGAGCTGGCGGAAGCAGCACCAGGTGGATCTCCTTCTGCAGACCTGGCGGCCCCCTCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS CCA 72 bp | GTCCCCATCCGCTATGGCCATCTCAGAAGCAGGGCCTaGGGCATCACTGGGACCCTCCATGTCCAGGGAGCT | + |
Preference number: 6 (lower is better) Translates to: VPIRYGHLRSRA*GITGTLHVQGA Trigger: AGCTCCCTGGACATGGAGGGTCCCAGTGATGCCCCAGGCCCTGCTTCTGAGATGGCCATAGCGGATGGGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS TCA 72 bp | CATGGGAGCCCTGAATGCTCTGCCCTTCCCGGCAGATaGGGGGTGCCTCTACACGGCTGTAATCCACCCCCA | + |
Preference number: 6 (lower is better) Translates to: HGSPECSALPGR*GVPLHGCNPPP Trigger: TGGGGGTGGATTACAGCCGTGTAGAGGCACCCCTCATCTGCCGGGAAGGGCAGAGCATTCAGGGCTCCCATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS GCA 72 bp | GCCCTGAATGCTCTGCCCTTCCCGGCAGATGAGGGGTaGCTCTACACGGCTGTAATCCACCCCCAGGATCCA | + |
Preference number: 6 (lower is better) Translates to: ALNALPFPADEG*LYTAVIHPQDP Trigger: TGGATCCTGGGGGTGGATTACAGCCGTGTAGAGGCACCCCTCATCTGCCGGGAAGGGCAGAGCATTCAGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS CCA 72 bp | CCGCCACTCGCCCAGGACTTCACTCCCCAGAAAGACTaGGATAAGCGGGCAGGTGGGGAAGCGCTTCTCGTA | + |
Preference number: 6 (lower is better) Translates to: PPLAQDFTPQKD*DKRAGGEALLV Trigger: TACGAGAAGCGCTTCCCCACCTGCCCGCTTATCCCAGTCTTTCTGGGGAGTGAAGTCCTGGGCGAGTGGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS CAA 90 bp | TGCTGCTTCCGCCAGCTCAAGGACTGGCACAACATGTCCCGGGCCTaGTCCAGGTGGAAGTCTCGTGCCCTCAGGAAGCGCAGGATATGC | + |
Preference number: 6 (lower is better) Translates to: CCFRQLKDWHNMSRA*SRWKSRALRKRRIC Trigger: GCATATCCTGCGCTTCCTGAGGGCACGAGACTTCCACCTGGACAAGGCCCGGGACATGTTGTGCCAGTCCTTGAGCTGGCGGAAGCAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS CCA 72 bp | AGATCCACCTGGTGCTGCTTCCGCCAGCTCAAGGACTaGCACAACATGTCCCGGGCCTTGTCCAGGTGGAAG | + |
Preference number: 6 (lower is better) Translates to: RSTWCCFRQLKD*HNMSRALSRWK Trigger: CTTCCACCTGGACAAGGCCCGGGACATGTTGTGCCAGTCCTTGAGCTGGCGGAAGCAGCACCAGGTGGATCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS CAA 72 bp | AGGGCTTTCACTCCAGGTCGCCACAAATGCCGCATGTaGAGGCCCTCCAGGTCCAGCAAGCAGGTCCAGGAG | + |
Preference number: 6 (lower is better) Translates to: RAFTPGRHKCRM*RPSRSSKQVQE Trigger: CTCCTGGACCTGCTTGCTGGACCTGGAGGGCCTCAACATGCGGCATTTGTGGCGACCTGGAGTGAAAGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS CAA 90 bp | ATCCGCAGTAGGGCTTTCACTCCAGGTCGCCACAAATGCCGCATGTaGAGGCCCTCCAGGTCCAGCAAGCAGGTCCAGGAGCTGATGGGA | + |
Preference number: 6 (lower is better) Translates to: IRSRAFTPGRHKCRM*RPSRSSKQVQELMG Trigger: TCCCATCAGCTCCTGGACCTGCTTGCTGGACCTGGAGGGCCTCAACATGCGGCATTTGTGGCGACCTGGAGTGAAAGCCCTACTGCGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS TCA 72 bp | GCGGGCAGGTGGGGAAGCGCTTCTCGTAGGCCGCCATaGCCAGCTCGAATGGATACTTGTATACTCGGACAG | + |
Preference number: 6 (lower is better) Translates to: AGRWGSASRRPP*PARMDTCILGQ Trigger: CTGTCCGAGTATACAAGTATCCATTCGAGCTGGTCATGGCGGCCTACGAGAAGCGCTTCCCCACCTGCCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS TCA 72 bp | TCCATAGCACTGGGAAGACTCGGGGAGCACGCACGATaGGCAGCCTGCCCAGAGTCTCGGGGTAATTGTCCT | + |
Preference number: 6 (lower is better) Translates to: SIALGRLGEHAR*AACPESRGNCP Trigger: AGGACAATTACCCCGAGACTCTGGGCAGGCTGCTCATCGTGCGTGCTCCCCGAGTCTTCCCAGTGCTATGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS GCA 72 bp | CAACATGTCCCGGGCCTTGTCCAGGTGGAAGTCTCGTaGCCTCAGGAAGCGCAGGATATGCTCGTCTTTGGG | + |
Preference number: 6 (lower is better) Translates to: QHVPGLVQVEVS*PQEAQDMLVFG Trigger: CCCAAAGACGAGCATATCCTGCGCTTCCTGAGGGCACGAGACTTCCACCTGGACAAGGCCCGGGACATGTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS GCA 72 bp | ATCCGCAGTAGGGCTTTCACTCCAGGTCGCCACAAATaGCGCATGTTGAGGCCCTCCAGGTCCAGCAAGCAG | + |
Preference number: 6 (lower is better) Translates to: IRSRAFTPGRHK*RMLRPSRSSKQ Trigger: CTGCTTGCTGGACCTGGAGGGCCTCAACATGCGGCATTTGTGGCGACCTGGAGTGAAAGCCCTACTGCGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS CCA 72 bp | AAGGACTGGCACAACATGTCCCGGGCCTTGTCCAGGTaGAAGTCTCGTGCCCTCAGGAAGCGCAGGATATGC | + |
Preference number: 6 (lower is better) Translates to: KDWHNMSRALSR*KSRALRKRRIC Trigger: GCATATCCTGCGCTTCCTGAGGGCACGAGACTTCCACCTGGACAAGGCCCGGGACATGTTGTGCCAGTCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS CAA 72 bp | CCACTGGCTCTCACTCCAGGCTCCTGGGGACTGAGCTaGGGTGCCTGCTTTGCATGGTACAGACTGAACACC | + |
Preference number: 6 (lower is better) Translates to: PLALTPGSWGLS*GACFAWYRLNT Trigger: GGTGTTCAGTCTGTACCATGCAAAGCAGGCACCCAAGCTCAGTCCCCAGGAGCCTGGAGTGAGAGCCAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS GCA 72 bp | TCCAGGCTCCTGGGGACTGAGCTTGGGTGCCTGCTTTaGATGGTACAGACTGAACACCACATCCCCTCTGAG | + |
Preference number: 6 (lower is better) Translates to: SRLLGTELGCLL*MVQTEHHIPSE Trigger: CTCAGAGGGGATGTGGTGTTCAGTCTGTACCATGCAAAGCAGGCACCCAAGCTCAGTCCCCAGGAGCCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS GCA 72 bp | CTCACTCCAGGCTCCTGGGGACTGAGCTTGGGTGCCTaGTTTGCATGGTACAGACTGAACACCACATCCCCT | + |
Preference number: 6 (lower is better) Translates to: LTPGSWGLSLGA*FAWYRLNTTSP Trigger: AGGGGATGTGGTGTTCAGTCTGTACCATGCAAAGCAGGCACCCAAGCTCAGTCCCCAGGAGCCTGGAGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS GCA 72 bp | GGCTCTCACTCCAGGCTCCTGGGGACTGAGCTTGGGTaGCTGCTTTGCATGGTACAGACTGAACACCACATC | + |
Preference number: 6 (lower is better) Translates to: GSHSRLLGTELG*LLCMVQTEHHI Trigger: GATGTGGTGTTCAGTCTGTACCATGCAAAGCAGGCACCCAAGCTCAGTCCCCAGGAGCCTGGAGTGAGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS CCA 72 bp | CAATGTAGTCTGCATCCAGCTTGTCCCCATCCGCTATaGCCATCTCAGAAGCAGGGCCTGGGGCATCACTGG | + |
Preference number: 6 (lower is better) Translates to: QCSLHPACPHPL*PSQKQGLGHHW Trigger: CCAGTGATGCCCCAGGCCCTGCTTCTGAGATGGCCATAGCGGATGGGGACAAGCTGGATGCAGACTACATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS CCA 72 bp | ATGCCAGCACTTCACAGTAGTACAGCAGCTTGCACTTaGGGCCAGGGCTGTGCAGAGCCGTCAGGACGTCAT | + |
Preference number: 6 (lower is better) Translates to: MPALHSSTAACT*GQGCAEPSGRH Trigger: ATGACGTCCTGACGGCTCTGCACAGCCCTGGCCCCAAGTGCAAGCTGCTGTACTACTGTGAAGTGCTGGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS GCA 72 bp | AGGTGGAAGTCTCGTGCCCTCAGGAAGCGCAGGATATaGTCGTCTTTGGGGATCTTGCCTTTGTGGGTCTCC | + |
Preference number: 6 (lower is better) Translates to: RWKSRALRKRRI*SSLGILPLWVS Trigger: GGAGACCCACAAAGGCAAGATCCCCAAAGACGAGCATATCCTGCGCTTCCTGAGGGCACGAGACTTCCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS CCA 72 bp | CCATGGCAACCTCATAGGGGGTCCCTCGGAGCACACTaGCAGAATGGTAGGTTTCACTCCACTGCTGTAGCT | + |
Preference number: 6 (lower is better) Translates to: PWQPHRGSLGAH*QNGRFHSTAVA Trigger: AGCTACAGCAGTGGAGTGAAACCTACCATTCTGCCAGTGTGCTCCGAGGGACCCCCTATGAGGTTGCCATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS GCA 72 bp | GGGACTGAGATGGCCCAGACATCTCTCAATGTAGTCTaGATCCAGCTTGTCCCCATCCGCTATGGCCATCTC | + |
Preference number: 6 (lower is better) Translates to: GTEMAQTSLNVV*IQLVPIRYGHL Trigger: GAGATGGCCATAGCGGATGGGGACAAGCTGGATGCAGACTACATTGAGAGATGTCTGGGCCATCTCAGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS CAA 72 bp | CAGCAAGCAGGTCCAGGAGCTGATGGGACGCCCAAATaGTCTCGTGTTCCCTTCGCATCTCTTCTGTCCTTC | + |
Preference number: 6 (lower is better) Translates to: QQAGPGADGTPK*SRVPFASLLSF Trigger: GAAGGACAGAAGAGATGCGAAGGGAACACGAGACAATTTGGGCGTCCCATCAGCTCCTGGACCTGCTTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS TCA 72 bp | GCCGAAGCTGAACCAGGCAACTCTCCTGCATGGGACTaGGATGGCCCAGACATCTCTCAATGTAGTCTGCAT | + |
Preference number: 6 (lower is better) Translates to: AEAEPGNSPAWD*DGPDISQCSLH Trigger: ATGCAGACTACATTGAGAGATGTCTGGGCCATCTCAGTCCCATGCAGGAGAGTTGCCTGGTTCAGCTTCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS TCA 72 bp | GCGTTCTCTCTCTCCAGTTCAGGACGTTTCTCTGAATaGAGACCACGTGCTCCACACCAGCAATCTTCCGCA | + |
Preference number: 6 (lower is better) Translates to: AFSLSSSGRFSE*RPRAPHQQSSA Trigger: TGCGGAAGATTGCTGGTGTGGAGCACGTGGTCTTCATTCAGAGAAACGTCCTGAACTGGAGAGAGAGAACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS TCA 72 bp | AGCAGCGTTCTCTCTCTCCAGTTCAGGACGTTTCTCTaGATGAAGACCACGTGCTCCACACCAGCAATCTTC | + |
Preference number: 6 (lower is better) Translates to: SSVLSLQFRTFL*MKTTCSTPAIF Trigger: GAAGATTGCTGGTGTGGAGCACGTGGTCTTCATTCAGAGAAACGTCCTGAACTGGAGAGAGAGAACGCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS TCA 72 bp | ATCCCCTCTGAGGATATCAAAGTCCCAGGTGATGACTaGCTCCCCTTCTGGTATCTCCATGGCAACCTCATA | + |
Preference number: 6 (lower is better) Translates to: IPSEDIKVPGDD*LPFWYLHGNLI Trigger: TATGAGGTTGCCATGGAGATACCAGAAGGGGAGTCAGTCATCACCTGGGACTTTGATATCCTCAGAGGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS GCA 72 bp | ATCACCTCCTTCCCCCTCTTGACATTGGCAGTGTACTaGTTCATGGCGATCTTCTCCAACGTGCTTTCAAAG | + |
Preference number: 6 (lower is better) Translates to: ITSFPLLTLAVY*FMAIFSNVLSK Trigger: CTTTGAAAGCACGTTGGAGAAGATCGCCATGAAGCAGTACACTGCCAATGTCAAGAGGGGGAAGGAGGTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |
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CDS CCA 72 bp | GAAGCGCTTCTCGTAGGCCGCCATGACCAGCTCGAATaGATACTTGTATACTCGGACAGGAGACTGATATTT | + |
Preference number: 6 (lower is better) Translates to: EALLVGRHDQLE*ILVYSDRRLIF Trigger: AAATATCAGTCTCCTGTCCGAGTATACAAGTATCCATTCGAGCTGGTCATGGCGGCCTACGAGAAGCGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165810.2 ENSMUST00000230616.2 |