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Pregenerated sensors for SEC14L5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000091712

Ensembl transcript IDs: ENSMUST00000165810.2, ENSMUST00000230616.2

Found 286 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCCCAGCTGTaGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGAT +
Preference number: 1 (lower is better)
Translates to: LCTLGPCRGITTPQL*HRAICIQQGPRCLD
Trigger: ATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAGCTGGGGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
3UTR TCA 90 bp CTGACCCTGCTGGCAACATGTGCTCCTTCACTCTCCCTGCAACTGTaGTTGTTCAGCATGGACCCAGGCCCCCGCAGGCTAAGGAGAGCT +
Preference number: 1 (lower is better)
Translates to: LTLLATCAPSLSLQL*LFSMDPGPRRLRRA
Trigger: AGCTCTCCTTAGCCTGCGGGGGCCTGGGTCCATGCTGAACAATCACAGTTGCAGGGAGAGTGAAGGAGCACATGTTGCCAGCAGGGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR TCA 90 bp CTGGGAGGCACTCCTGCTGCTCTTGACTTGGGGTTGCTGACAACATaGAGTCCATGCTTGCTCACTGGGCCCCACAGCCAGAAACCACCC +
Preference number: 1 (lower is better)
Translates to: LGGTPAALDLGLLTT*SPCLLTGPHSQKPP
Trigger: GGGTGGTTTCTGGCTGTGGGGCCCAGTGAGCAAGCATGGACTTCATGTTGTCAGCAACCCCAAGTCAAGAGCAGCAGGAGTGCCTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CCA 90 bp GTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATaGGCTTCGTTCTCATTCTCAACGCCACCTGATGCCAGAAGCTCG +
Preference number: 1 (lower is better)
Translates to: VAPRHLHPTGSQVSR*ASFSFSTPPDARSS
Trigger: CGAGCTTCTGGCATCAGGTGGCGTTGAGAATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
3UTR CCA 90 bp GCTGTGGACAAAGCTTCAGTCGGGCAGAAACCCAGGACAGCGGTGTaGCTCAGTGCTGGTTGGCAGGGGTGGAAACTAGTGTGGGCTAAG +
Preference number: 1 (lower is better)
Translates to: AVDKASVGQKPRTAV*LSAGWQGWKLVWAK
Trigger: CTTAGCCCACACTAGTTTCCACCCCTGCCAACCAGCACTGAGCCACACCGCTGTCCTGGGTTTCTGCCCGACTGAAGCTTTGTCCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR TCA 90 bp CCCACAGCCAGAAACCACCCCTCTCAGCCTGCTGACCTGCAGAAATaGTCCCAACTCTATGCCGGGCTGACAGAGAAGAGCAGATGGTGG +
Preference number: 1 (lower is better)
Translates to: PTARNHPSQPADLQK*SQLYAGLTEKSRWW
Trigger: CCACCATCTGCTCTTCTCTGTCAGCCCGGCATAGAGTTGGGATCATTTCTGCAGGTCAGCAGGCTGAGAGGGGTGGTTTCTGGCTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR GCA 90 bp CTTCCCGGCACCCTTGGGCTATTTTTAGTTGCTGGCTTTCCCCAGTaGCAACGTAGGAGGGCACAGTGGATGCCTCCACAGCCATCTGTT +
Preference number: 1 (lower is better)
Translates to: LPGTLGLFLVAGFPQ*QRRRAQWMPPQPSV
Trigger: AACAGATGGCTGTGGAGGCATCCACTGTGCCCTCCTACGTTGGCACTGGGGAAAGCCAGCAACTAAAAATAGCCCAAGGGTGCCGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CCA 90 bp GCCAGTAGTCCTTCAGCTGGCCTTGCCCTTTCCAGAGCACGTGATTaGCCTGAGAAATGTCCTGTCATCCAAGCTGGCCAAATCACGGCG +
Preference number: 1 (lower is better)
Translates to: ASSPSAGLALSRARD*PEKCPVIQAGQITA
Trigger: CGCCGTGATTTGGCCAGCTTGGATGACAGGACATTTCTCAGGCCAATCACGTGCTCTGGAAAGGGCAAGGCCAGCTGAAGGACTACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CCA 90 bp TCAGTCGGGCAGAAACCCAGGACAGCGGTGTGGCTCAGTGCTGGTTaGCAGGGGTGGAAACTAGTGTGGGCTAAGGAAAACCAGAAATCC +
Preference number: 1 (lower is better)
Translates to: SVGQKPRTAVWLSAG*QGWKLVWAKENQKS
Trigger: GGATTTCTGGTTTTCCTTAGCCCACACTAGTTTCCACCCCTGCCAACCAGCACTGAGCCACACCGCTGTCCTGGGTTTCTGCCCGACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CCA 90 bp AATGAAGAAAGAAACCCACACCACACACCTCTCTGCCCTGGGGTGTaGGGAAAGGAAAGGCCGTGGACAGCTTGGCAGGCCCTTCTATGG +
Preference number: 1 (lower is better)
Translates to: NEERNPHHTPLCPGV*GKERPWTAWQALLW
Trigger: CCATAGAAGGGCCTGCCAAGCTGTCCACGGCCTTTCCTTTCCCCACACCCCAGGGCAGAGAGGTGTGTGGTGTGGGTTTCTTTCTTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR TCA 90 bp AAGCTTTGGTTGGAGAGTCAGGTTAGCAGTGCAGTTAAAGGTCACTaGGACGGACTCGGATTGAGGCGGGGTGGGAGAATGCTCGCCCAG +
Preference number: 1 (lower is better)
Translates to: KLWLESQVSSAVKGH*DGLGLRRGGRMLAQ
Trigger: CTGGGCGAGCATTCTCCCACCCCGCCTCAATCCGAGTCCGTCTCAGTGACCTTTAACTGCACTGCTAACCTGACTCTCCAACCAAAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR GCA 90 bp AGAACTACAGCCACGGGAGGCTGTTTCCTGCAGGAAACAGAGCCCTaGCTCCCATCACAGCTTCTTAGACAGTGCTCAGTCACAAACAGC +
Preference number: 1 (lower is better)
Translates to: RTTATGGCFLQETEP*LPSQLLRQCSVTNS
Trigger: GCTGTTTGTGACTGAGCACTGTCTAAGAAGCTGTGATGGGAGGCAGGGCTCTGTTTCCTGCAGGAAACAGCCTCCCGTGGCTGTAGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR GCA 90 bp TGGAAGGAGACAAGAATGGCTGGAGTCACCCCATCACCCCATCATTaGCTGGAACTAGGCAGAAGCCCTGGGCTTCCCTATGTTCCTCAA +
Preference number: 1 (lower is better)
Translates to: WKETRMAGVTPSPHH*LELGRSPGLPYVPQ
Trigger: TTGAGGAACATAGGGAAGCCCAGGGCTTCTGCCTAGTTCCAGGCAATGATGGGGTGATGGGGTGACTCCAGCCATTCTTGTCTCCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR GCA 90 bp ATCCTCCTGCCTCCACCCAGCACTGAGACTACAGGTGTGCATCTCTaGATCTGGCTTTTTACATGGCTGCTGGGGATCCAAACTCGGGAT +
Preference number: 1 (lower is better)
Translates to: ILLPPPSTETTGVHL*IWLFTWLLGIQTRD
Trigger: ATCCCGAGTTTGGATCCCCAGCAGCCATGTAAAAAGCCAGATGCAGAGATGCACACCTGTAGTCTCAGTGCTGGGTGGAGGCAGGAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR GCA 90 bp CTCCAGGTATCCTCCTGCCTCCACCCAGCACTGAGACTACAGGTGTaGATCTCTGCATCTGGCTTTTTACATGGCTGCTGGGGATCCAAA +
Preference number: 1 (lower is better)
Translates to: LQVSSCLHPALRLQV*ISASGFLHGCWGSK
Trigger: TTTGGATCCCCAGCAGCCATGTAAAAAGCCAGATGCAGAGATGCACACCTGTAGTCTCAGTGCTGGGTGGAGGCAGGAGGATACCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR TCA 90 bp ATTCTGACCACGATTCCCATCACTGGGAGGCACTCCTGCTGCTCTTaGCTTGGGGTTGCTGACAACATGAAGTCCATGCTTGCTCACTGG +
Preference number: 1 (lower is better)
Translates to: ILTTIPITGRHSCCS*LGVADNMKSMLAHW
Trigger: CCAGTGAGCAAGCATGGACTTCATGTTGTCAGCAACCCCAAGTCAAGAGCAGCAGGAGTGCCTCCCAGTGATGGGAATCGTGGTCAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR GCA 90 bp GAAGAGACCTTCAGGGCCCTGTTACACTCTGTTTGTCACAGTGTCTaGAGGGTAAATGTGCAAAGGCTGCCAGACAGCTTCTCCCCTGAG +
Preference number: 1 (lower is better)
Translates to: EETFRALLHSVCHSV*RVNVQRLPDSFSPE
Trigger: CTCAGGGGAGAAGCTGTCTGGCAGCCTTTGCACATTTACCCTGCAGACACTGTGACAAACAGAGTGTAACAGGGCCCTGAAGGTCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR GCA 90 bp ACAAATGAACAGAATGAAGAAAGAAACCCACACCACACACCTCTCTaGCCTGGGGTGTGGGGAAAGGAAAGGCCGTGGACAGCTTGGCAG +
Preference number: 1 (lower is better)
Translates to: TNEQNEERNPHHTPL*PGVWGKERPWTAWQ
Trigger: CTGCCAAGCTGTCCACGGCCTTTCCTTTCCCCACACCCCAGGGCAGAGAGGTGTGTGGTGTGGGTTTCTTTCTTCATTCTGTTCATTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CCA 90 bp CTGCCTCCACCCAGCACTGAGACTACAGGTGTGCATCTCTGCATCTaGCTTTTTACATGGCTGCTGGGGATCCAAACTCGGGATATCATG +
Preference number: 1 (lower is better)
Translates to: LPPPSTETTGVHLCI*LFTWLLGIQTRDIM
Trigger: CATGATATCCCGAGTTTGGATCCCCAGCAGCCATGTAAAAAGCCAGATGCAGAGATGCACACCTGTAGTCTCAGTGCTGGGTGGAGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR TCA 90 bp ACGTGTTCCATTGCTTTTCCTGAAGAGCAGAACAGGGCAGAATTCTaGCCACGATTCCCATCACTGGGAGGCACTCCTGCTGCTCTTGAC +
Preference number: 1 (lower is better)
Translates to: TCSIAFPEEQNRAEF*PRFPSLGGTPAALD
Trigger: GTCAAGAGCAGCAGGAGTGCCTCCCAGTGATGGGAATCGTGGTCAGAATTCTGCCCTGTTCTGCTCTTCAGGAAAAGCAATGGAACACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR TCA 90 bp TGTCTGCAGGGTAAATGTGCAAAGGCTGCCAGACAGCTTCTCCCCTaGGCGTTTCTCAGAGTCAAGCTTTGGTTGGAGAGTCAGGTTAGC +
Preference number: 1 (lower is better)
Translates to: CLQGKCAKAARQLLP*AFLRVKLWLESQVS
Trigger: GCTAACCTGACTCTCCAACCAAAGCTTGACTCTGAGAAACGCTCAGGGGAGAAGCTGTCTGGCAGCCTTTGCACATTTACCCTGCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CCA 90 bp GCCCACTACTCCCCCTTGGAGCGTTTGGGAAAGTCATATCAGTCTTaGAGAAAGTCCCTGAGTCAGATCAGTTCCAGGATAGAGATGCCA +
Preference number: 1 (lower is better)
Translates to: AHYSPLERLGKSYQS*RKSLSQISSRIEMP
Trigger: TGGCATCTCTATCCTGGAACTGATCTGACTCAGGGACTTTCTCCAAGACTGATATGACTTTCCCAAACGCTCCAAGGGGGAGTAGTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CCA 90 bp GGACAGCTTGGCAGGCCCTTCTATGGGATATTTTGTGCACGTGTGTaGTATAGTGTGAAGGCCATGTGTTGGGTGTCTTCATTTGCTCTC +
Preference number: 1 (lower is better)
Translates to: GQLGRPFYGIFCARV*YSVKAMCWVSSFAL
Trigger: GAGAGCAAATGAAGACACCCAACACATGGCCTTCACACTATACCACACACGTGCACAAAATATCCCATAGAAGGGCCTGCCAAGCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CCA 90 bp AGACTACAGGTGTGCATCTCTGCATCTGGCTTTTTACATGGCTGCTaGGGATCCAAACTCGGGATATCATGCTTGTACCACGGCCATTTT +
Preference number: 1 (lower is better)
Translates to: RLQVCISASGFLHGC*GSKLGISCLYHGHF
Trigger: AAAATGGCCGTGGTACAAGCATGATATCCCGAGTTTGGATCCCCAGCAGCCATGTAAAAAGCCAGATGCAGAGATGCACACCTGTAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CCA 90 bp ACTGAGACTGGCCAAAAGTCAACAACAAACAGTGACCACCTTCTGTaGATCCAGGAAATAAAAAGAGAGAAGTCTTGGTCTCCAGGAAGG +
Preference number: 1 (lower is better)
Translates to: TETGQKSTTNSDHLL*IQEIKREKSWSPGR
Trigger: CCTTCCTGGAGACCAAGACTTCTCTCTTTTTATTTCCTGGATCCACAGAAGGTGGTCACTGTTTGTTGTTGACTTTTGGCCAGTCTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR-3UTR CCA 90 bp CAGTCGGGCAGAAACCCAGGACAGCGGTGTGGCTCAGTGCTGGTTGGCAGGGGTGAGGGCACCCAGCCCTaGTCCCATCCTAGACTCCAG +
Preference number: 2 (lower is better)
Translates to: QSGRNPGQRCGSVLVGRGEGTQP*SHPRLQ
Trigger: CTGGAGTCTAGGATGGGACCAGGGCTGGGTGCCCTC...ACCCCTGCCAACCAGCACTGAGCCACACCGCTGTCCTGGGTTTCTGCCCGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR-3UTR TCA 90 bp AGCTGGGAACCCTGCTGGGCCAGCCATACCTGCAGCAAGACCCCTTTCTGCCACGCTGACCTGCAGAAATaGTCCCAACTCTATGCCGGG +
Preference number: 2 (lower is better)
Translates to: SWEPCWASHTCSKTPFCHADLQK*SQLYAG
Trigger: CCCGGCATAGAGTTGGGATCATTTCTGCAGGTCAGC...GTGGCAGAAAGGGGTCTTGCTGCAGGTATGGCTGGCCCAGCAGGGTTCCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR-3UTR TCA 90 bp GTCTTGGTCTCCAGGAAGGCCCACTACTCCCCCTTGGAGCGTTTGGGAAAGTCAAGTCACAGCAAATGGTaGGAGGGCACCCAGCCCTGG +
Preference number: 2 (lower is better)
Translates to: VLVSRKAHYSPLERLGKSSHSKW*EGTQPW
Trigger: CCAGGGCTGGGTGCCCTCTCACCATTTGCTGTGACT...TGACTTTCCCAAACGCTCCAAGGGGGAGTAGTGGGCCTTCCTGGAGACCAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR-3UTR CCA 90 bp GCAGCCTCTCAGCAGGGAGAGGGTGTGAGGCAAGTGTGCAAAGAGATGTTGAGTGCTCCCTCTGCACTCTaGGTCCCTGCCGTGGGATCA +
Preference number: 2 (lower is better)
Translates to: AASQQGEGVRQVCKEMLSAPSAL*VPAVGS
Trigger: TGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGC...ACTCAACATCTCTTTGCACACTTGCCTCACACCCTCTCCCTGCTGAGAGGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR-3UTR CCA 90 bp TTTGAAGCTGCCATCAGCAGCCTCTCAGCAGGGAGAGGGTGTGAGGCAAGTGTGGAGAAGAGCAGATGGTaGCGCTTCTGGGCCAGGCTG +
Preference number: 2 (lower is better)
Translates to: FEAAISSLSAGRGCEASVEKSRW*RFWARL
Trigger: CAGCCTGGCCCAGAAGCGCCACCATCTGCTCTTCTC...CACACTTGCCTCACACCCTCTCCCTGCTGAGAGGCTGCTGATGGCAGCTTCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CAA 90 bp ACCATCGACCCAGTCACCCACCCGCCAGTAGTCCTTCAGCTGGCCTaGCCCTTTCCAGAGCACGTGATTGGCCTGAGAAATGTCCTGTCA +
Preference number: 2 (lower is better)
Translates to: TIDPVTHPPVVLQLA*PFPEHVIGLRNVLS
Trigger: TGACAGGACATTTCTCAGGCCAATCACGTGCTCTGGAAAGGGCAAGGCCAGCTGAAGGACTACTGGCGGGTGGGTGACTGGGTCGATGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR-3UTR TCA 90 bp GAAAGGCCGTGGACAGCTTGGCAGGCCCTTCTATGGGATATTTTGTGCACGTGTGAGACGGACTCGGATTaGGGCGGGGTGGGAGAATGC +
Preference number: 2 (lower is better)
Translates to: ERPWTAWQALLWDILCTCETDSD*GGVGEC
Trigger: GCATTCTCCCACCCCGCCTCAATCCGAGTCCGTCTC...ACACGTGCACAAAATATCCCATAGAAGGGCCTGCCAAGCTGTCCACGGCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR-3UTR TCA 90 bp AGCTGGGAACCCTGCTGGGCCAGCCATACCTGCAGCAAGACCCCTTTCTGCCACGTCAACAACAAACAGTaGCCACCTTCTGTGGATCCA +
Preference number: 2 (lower is better)
Translates to: SWEPCWASHTCSKTPFCHVNNKQ*PPSVDP
Trigger: TGGATCCACAGAAGGTGGTCACTGTTTGTTGTTGAC...GTGGCAGAAAGGGGTCTTGCTGCAGGTATGGCTGGCCCAGCAGGGTTCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CAA 90 bp CTGGAAGGAGACAAGAATGGCTGGAGTCACCCCATCACCCCATCATaGCCTGGAACTAGGCAGAAGCCCTGGGCTTCCCTATGTTCCTCA +
Preference number: 2 (lower is better)
Translates to: LEGDKNGWSHPITPS*PGTRQKPWASLCSS
Trigger: TGAGGAACATAGGGAAGCCCAGGGCTTCTGCCTAGTTCCAGGCAATGATGGGGTGATGGGGTGACTCCAGCCATTCTTGTCTCCTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR-3UTR TCA 90 bp TTTGAAGCTGCCATCAGCAGCCTCTCAGCAGGGAGAGGGTGTGAGGCAAGTGTGCTCTCCCTGCAACTGTaGTTGTTCAGCATGGACCCA +
Preference number: 2 (lower is better)
Translates to: FEAAISSLSAGRGCEASVLSLQL*LFSMDP
Trigger: TGGGTCCATGCTGAACAATCACAGTTGCAGGGAGAG...CACACTTGCCTCACACCCTCTCCCTGCTGAGAGGCTGCTGATGGCAGCTTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR-3UTR CCA 90 bp AGTCTTGGTCTCCAGGAAGGCCCACTACTCCCCCTTGGAGCGTTTGGGAAAGTCGGAAGGAGACAAGAATaGCTGGAGTCACCCCATCAC +
Preference number: 2 (lower is better)
Translates to: SLGLQEGPLLPLGAFGKVGRRQE*LESPHH
Trigger: GTGATGGGGTGACTCCAGCCATTCTTGTCTCCTTCC...GACTTTCCCAAACGCTCCAAGGGGGAGTAGTGGGCCTTCCTGGAGACCAAGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR-3UTR GCA 90 bp TTTGAAGCTGCCATCAGCAGCCTCTCAGCAGGGAGAGGGTGTGAGGCAAGTGTGCTCAGCCTGCTGACCTaGAGAAATGATCCCAACTCT +
Preference number: 2 (lower is better)
Translates to: FEAAISSLSAGRGCEASVLSLLT*RNDPNS
Trigger: AGAGTTGGGATCATTTCTGCAGGTCAGCAGGCTGAG...CACACTTGCCTCACACCCTCTCCCTGCTGAGAGGCTGCTGATGGCAGCTTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CAA 90 bp GGTGGAGAGAGAGGAAGAGACCTTCAGGGCCCTGTTACACTCTGTTaGTCACAGTGTCTGCAGGGTAAATGTGCAAAGGCTGCCAGACAG +
Preference number: 2 (lower is better)
Translates to: GGERGRDLQGPVTLC*SQCLQGKCAKAARQ
Trigger: CTGTCTGGCAGCCTTTGCACATTTACCCTGCAGACACTGTGACAAACAGAGTGTAACAGGGCCCTGAAGGTCTCTTCCTCTCTCTCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR-3UTR TCA 90 bp GCAGCCTCTCAGCAGGGAGAGGGTGTGAGGCAAGTGTGCAAAGAGATGTTGAGTTCCAGATTAGACATCTaGCCCTGCTGGCAACATGTG +
Preference number: 2 (lower is better)
Translates to: AASQQGEGVRQVCKEMLSSRLDI*PCWQHV
Trigger: CACATGTTGCCAGCAGGGTCAGATGTCTAATCTGGA...ACTCAACATCTCTTTGCACACTTGCCTCACACCCTCTCCCTGCTGAGAGGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CAA 90 bp GAAGTCTTGGTCTCCAGGAAGGCCCACTACTCCCCCTTGGAGCGTTaGGGAAAGTCATATCAGTCTTGGAGAAAGTCCCTGAGTCAGATC +
Preference number: 2 (lower is better)
Translates to: EVLVSRKAHYSPLER*GKSYQSWRKSLSQI
Trigger: GATCTGACTCAGGGACTTTCTCCAAGACTGATATGACTTTCCCAAACGCTCCAAGGGGGAGTAGTGGGCCTTCCTGGAGACCAAGACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR-3UTR CCA 90 bp CTGCACGAGGTTTCACAGCTAGTGAAAGAAAGGCTGGGGTTTCAAGGATATAGATGTGATTGTTCAGCATaGACCCAGGCCCCCGCAGGC +
Preference number: 2 (lower is better)
Translates to: LHEVSQLVKERLGFQGYRCDCSA*TQAPAG
Trigger: GCCTGCGGGGGCCTGGGTCCATGCTGAACAATCACA...TCTATATCCTTGAAACCCCAGCCTTTCTTTCACTAGCTGTGAAACCTCGTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR-3UTR CCA 90 bp GCAGCCTCTCAGCAGGGAGAGGGTGTGAGGCAAGTGTGCAAAGAGATGTTGAGTTCAAATGGTTTTAGCTaGGGGTGGAGAGAGAGGAAG +
Preference number: 2 (lower is better)
Translates to: AASQQGEGVRQVCKEMLSSNGFS*GWRERK
Trigger: CTTCCTCTCTCTCCACCCCCAGCTAAAACCATTTGA...ACTCAACATCTCTTTGCACACTTGCCTCACACCCTCTCCCTGCTGAGAGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR-3UTR GCA 90 bp AGCTGGGAACCCTGCTGGGCCAGCCATACCTGCAGCAAGACCCCTTTCTGCCACGATTTCTACATGCTATaGCTCAATCCTAATTTCTAC +
Preference number: 2 (lower is better)
Translates to: SWEPCWASHTCSKTPFCHDFYML*LNPNFY
Trigger: GTAGAAATTAGGATTGAGGCATAGCATGTAGAAATC...GTGGCAGAAAGGGGTCTTGCTGCAGGTATGGCTGGCCCAGCAGGGTTCCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR-3UTR GCA 90 bp GCATCTGGCTTTTTACATGGCTGCTGGGGATCCAAACTCGGGATATCATGCTTGAGCAAGACCCCTTTCTaGCACCCCAAACAAAGGACC +
Preference number: 2 (lower is better)
Translates to: ASGFLHGCWGSKLGISCLSKTPF*HPKQRT
Trigger: GGTCCTTTGTTTGGGGTGGCAGAAAGGGGTCTTGCT...CAAGCATGATATCCCGAGTTTGGATCCCCAGCAGCCATGTAAAAAGCCAGATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR-3UTR GCA 90 bp CTGCACGAGGTTTCACAGCTAGTGAAAGAAAGGCTGGGGTTTCAAGGATATAGATGGGCCAGCCATACCTaGAGCAAGACCCCTTTCTGC +
Preference number: 2 (lower is better)
Translates to: LHEVSQLVKERLGFQGYRWASHT*SKTPFC
Trigger: GCAGAAAGGGGTCTTGCTGCAGGTATGGCTGGCCCA...TCTATATCCTTGAAACCCCAGCCTTTCTTTCACTAGCTGTGAAACCTCGTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR-3UTR CCA 90 bp GAAAGGCCGTGGACAGCTTGGCAGGCCCTTCTATGGGATATTTTGTGCACGTGTCCCCCTTGGAGCGTTTaGGAAAGTCATATCAGTCTT +
Preference number: 2 (lower is better)
Translates to: ERPWTAWQALLWDILCTCPPWSV*ESHISL
Trigger: AAGACTGATATGACTTTCCCAAACGCTCCAAGGGGG...ACACGTGCACAAAATATCCCATAGAAGGGCCTGCCAAGCTGTCCACGGCCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CAA 90 bp AAAAAGAGAGAAGTCTTGGTCTCCAGGAAGGCCCACTACTCCCCCTaGGAGCGTTTGGGAAAGTCATATCAGTCTTGGAGAAAGTCCCTG +
Preference number: 2 (lower is better)
Translates to: KKREVLVSRKAHYSP*ERLGKSYQSWRKSL
Trigger: CAGGGACTTTCTCCAAGACTGATATGACTTTCCCAAACGCTCCAAGGGGGAGTAGTGGGCCTTCCTGGAGACCAAGACTTCTCTCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR-3UTR TCA 90 bp CTGCACGAGGTTTCACAGCTAGTGAAAGAAAGGCTGGGGTTTCAAGGATATAGAACCAGGCTGAGACTCTaGCTCCAATCACGCCTGAAC +
Preference number: 2 (lower is better)
Translates to: LHEVSQLVKERLGFQGYRTRLRL*LQSRLN
Trigger: GTTCAGGCGTGATTGGAGTCAGAGTCTCAGCCTGGT...TCTATATCCTTGAAACCCCAGCCTTTCTTTCACTAGCTGTGAAACCTCGTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CAA 90 bp CACACAGACACACACACACACACACACACACACACACGTGTTCCATaGCTTTTCCTGAAGAGCAGAACAGGGCAGAATTCTGACCACGAT +
Preference number: 2 (lower is better)
Translates to: HTDTHTHTHTHTRVP*LFLKSRTGQNSDHD
Trigger: ATCGTGGTCAGAATTCTGCCCTGTTCTGCTCTTCAGGAAAAGCAATGGAACACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR-3UTR TCA 90 bp TACATGCTATGCCTCAATCCTAATTTCTACATGGTAAGCCACTCTCTAGGCAAATCCCCTGCACCAGGCTaGGACTCTGACTCCAATCAC +
Preference number: 2 (lower is better)
Translates to: YMLCLNPNFYMVSHSLGKSPAPG*DSDSNH
Trigger: GTGATTGGAGTCAGAGTCTCAGCCTGGTGCAGGGGA...TTTGCCTAGAGAGTGGCTTACCATGTAGAAATTAGGATTGAGGCATAGCATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR-3UTR TCA 90 bp CAAAACAAAAACAATCACCACAGAAATGGACCGTGCAGTGGCTCGGTGGTAGTGTTCCATTGCTTTTCCTaGAGAGCAGAACAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: QNKNNHHRNGPCSGSVVVFHCFS*RAEQGR
Trigger: TCTGCCCTGTTCTGCTCTTCAGGAAAAGCAATGGAA...CACTACCACCGAGCCACTGCACGGTCCATTTCTGTGGTGATTGTTTTTGTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR-3UTR GCA 90 bp CAAAACAAAAACAATCACCACAGAAATGGACCGTGCAGTGGCTCGGTGGTAGTGCTCCTTCACTCTCCCTaGAACTGTGATTGTTCAGCA +
Preference number: 2 (lower is better)
Translates to: QNKNNHHRNGPCSGSVVVLLHSP*NCDCSA
Trigger: TGCTGAACAATCACAGTTGCAGGGAGAGTGAAGGAG...CACTACCACCGAGCCACTGCACGGTCCATTTCTGTGGTGATTGTTTTTGTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR-3UTR CCA 90 bp GAAAGGCCGTGGACAGCTTGGCAGGCCCTTCTATGGGATATTTTGTGCACGTGTAGTGACCACCTTCTGTaGATCCAGGAAATAAAAAGA +
Preference number: 2 (lower is better)
Translates to: ERPWTAWQALLWDILCTCSDHLL*IQEIKR
Trigger: TCTTTTTATTTCCTGGATCCACAGAAGGTGGTCACT...ACACGTGCACAAAATATCCCATAGAAGGGCCTGCCAAGCTGTCCACGGCCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR-3UTR CCA 90 bp GCATCTGGCTTTTTACATGGCTGCTGGGGATCCAAACTCGGGATATCATGCTTGAAGTCATATCAGTCTTaGAGAAAGTCCCTGAGTCAG +
Preference number: 2 (lower is better)
Translates to: ASGFLHGCWGSKLGISCLKSYQS*RKSLSQ
Trigger: CTGACTCAGGGACTTTCTCCAAGACTGATATGACTT...CAAGCATGATATCCCGAGTTTGGATCCCCAGCAGCCATGTAAAAAGCCAGATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR-3UTR CCA 90 bp CAAAACAAAAACAATCACCACAGAAATGGACCGTGCAGTGGCTCGGTGGTAGTGCTGCTCGTGGTGATTTaGAGACAACTGGTTTTCAAT +
Preference number: 2 (lower is better)
Translates to: QNKNNHHRNGPCSGSVVVLLVVI*RQLVFN
Trigger: ATTGAAAACCAGTTGTCTCCAAATCACCACGAGCAG...CACTACCACCGAGCCACTGCACGGTCCATTTCTGTGGTGATTGTTTTTGTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR GCA 72 bp GCCGTGAAGCGAAGCTCCCTCTGCACTCTGGGTCCCTaGCGTGGGATCACCACACCCCAGCTGTGGCACCGC +
Preference number: 3 (lower is better)
Translates to: AVKRSSLCTLGP*RGITTPQLWHR
Trigger: GCGGTGCCACAGCTGGGGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCTTCACGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
3UTR CCA 72 bp CTGGGTCCCTGCCGTGGGATCACCACACCCCAGCTGTaGCACCGCGCCATCTGCATCCAACAGGGTCCCAGG +
Preference number: 3 (lower is better)
Translates to: LGPCRGITTPQL*HRAICIQQGPR
Trigger: CCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAGCTGGGGTGTGGTGATCCCACGGCAGGGACCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
3UTR CCA 72 bp GAAGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTaGGATCACCACACCCCAGCTGTGGCACCGCGCCAT +
Preference number: 3 (lower is better)
Translates to: EAKLPLHSGSLP*DHHTPAVAPRH
Trigger: ATGGCGCGGTGCCACAGCTGGGGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
3UTR CCA 72 bp AGAAACCCACACCACACACCTCTCTGCCCTGGGGTGTaGGGAAAGGAAAGGCCGTGGACAGCTTGGCAGGCC +
Preference number: 3 (lower is better)
Translates to: RNPHHTPLCPGV*GKERPWTAWQA
Trigger: GGCCTGCCAAGCTGTCCACGGCCTTTCCTTTCCCCACACCCCAGGGCAGAGAGGTGTGTGGTGTGGGTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR GCA 72 bp GAGGTCAGCTGGGAACCCTGCTGGGCCAGCCATACCTaGAGCAAGACCCCTTTCTGCCACCCCAAACAAAGG +
Preference number: 3 (lower is better)
Translates to: EVSWEPCWASHT*SKTPFCHPKQR
Trigger: CCTTTGTTTGGGGTGGCAGAAAGGGGTCTTGCTGCAGGTATGGCTGGCCCAGCAGGGTTCCCAGCTGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR TCA 72 bp GCAGTGCAGTTAAAGGTCACTGAGACGGACTCGGATTaGGGCGGGGTGGGAGAATGCTCGCCCAGCATGAGC +
Preference number: 3 (lower is better)
Translates to: AVQLKVTETDSD*GGVGECSPSMS
Trigger: GCTCATGCTGGGCGAGCATTCTCCCACCCCGCCTCAATCCGAGTCCGTCTCAGTGACCTTTAACTGCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CCA 72 bp AGGCCCCCGCAGGCTAAGGAGAGCTTCCTAGTGGCCTaGGACTTGGGGAAGAGACATTCCCTTGCGCACTTT +
Preference number: 3 (lower is better)
Translates to: RPPQAKESFLVA*DLGKRHSLAHF
Trigger: AAAGTGCGCAAGGGAATGTCTCTTCCCCAAGTCCCAGGCCACTAGGAAGCTCTCCTTAGCCTGCGGGGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR TCA 72 bp CTGGCAACATGTGCTCCTTCACTCTCCCTGCAACTGTaGTTGTTCAGCATGGACCCAGGCCCCCGCAGGCTA +
Preference number: 3 (lower is better)
Translates to: LATCAPSLSLQL*LFSMDPGPRRL
Trigger: TAGCCTGCGGGGGCCTGGGTCCATGCTGAACAATCACAGTTGCAGGGAGAGTGAAGGAGCACATGTTGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR TCA 72 bp TGGGAGGCACTCCTGCTGCTCTTGACTTGGGGTTGCTaGCAACATGAAGTCCATGCTTGCTCACTGGGCCCC +
Preference number: 3 (lower is better)
Translates to: WEALLLLLTWGC*QHEVHACSLGP
Trigger: GGGGCCCAGTGAGCAAGCATGGACTTCATGTTGTCAGCAACCCCAAGTCAAGAGCAGCAGGAGTGCCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR GCA 72 bp GGGGAAACAGAACTACAGCCACGGGAGGCTGTTTCCTaGAGGAAACAGAGCCCTGCCTCCCATCACAGCTTC +
Preference number: 3 (lower is better)
Translates to: GETELQPREAVS*RKQSPASHHSF
Trigger: GAAGCTGTGATGGGAGGCAGGGCTCTGTTTCCTGCAGGAAACAGCCTCCCGTGGCTGTAGTTCTGTTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR GCA 72 bp GCTTTCCCCAGTGCCAACGTAGGAGGGCACAGTGGATaGCTCCACAGCCATCTGTTCCTGTTACAACCCAGG +
Preference number: 3 (lower is better)
Translates to: AFPSANVGGHSG*LHSHLFLLQPR
Trigger: CCTGGGTTGTAACAGGAACAGATGGCTGTGGAGGCATCCACTGTGCCCTCCTACGTTGGCACTGGGGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CCA 72 bp AAAGCTTCAGTCGGGCAGAAACCCAGGACAGCGGTGTaGCTCAGTGCTGGTTGGCAGGGGTGGAAACTAGTG +
Preference number: 3 (lower is better)
Translates to: KASVGQKPRTAV*LSAGWQGWKLV
Trigger: CACTAGTTTCCACCCCTGCCAACCAGCACTGAGCCACACCGCTGTCCTGGGTTTCTGCCCGACTGAAGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CCA 72 bp GCTGGCTTTCCCCAGTGCCAACGTAGGAGGGCACAGTaGATGCCTCCACAGCCATCTGTTCCTGTTACAACC +
Preference number: 3 (lower is better)
Translates to: AGFPQCQRRRAQ*MPPQPSVPVTT
Trigger: GGTTGTAACAGGAACAGATGGCTGTGGAGGCATCCACTGTGCCCTCCTACGTTGGCACTGGGGAAAGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR-3UTR CAA 90 bp GCAGCCTCTCAGCAGGGAGAGGGTGTGAGGCAAGTGTGCAAAGAGATGTTGAGTGTGGCTCAGTGCTGGTaGGCAGGGGTGGAAACTAGT +
Preference number: 3 (lower is better)
Translates to: AASQQGEGVRQVCKEMLSVAQCW*AGVETS
Trigger: ACTAGTTTCCACCCCTGCCAACCAGCACTGAGCCAC...ACTCAACATCTCTTTGCACACTTGCCTCACACCCTCTCCCTGCTGAGAGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR TCA 72 bp CTGACCTGCAGAAATGATCCCAACTCTATGCCGGGCTaGCAGAGAAGAGCAGATGGTGGCGCTTCTGGGCCA +
Preference number: 3 (lower is better)
Translates to: LTCRNDPNSMPG*QRRADGGASGP
Trigger: TGGCCCAGAAGCGCCACCATCTGCTCTTCTCTGTCAGCCCGGCATAGAGTTGGGATCATTTCTGCAGGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR TCA 72 bp ACTCCTGCTGCTCTTGACTTGGGGTTGCTGACAACATaGAGTCCATGCTTGCTCACTGGGCCCCACAGCCAG +
Preference number: 3 (lower is better)
Translates to: TPAALDLGLLTT*SPCLLTGPHSQ
Trigger: CTGGCTGTGGGGCCCAGTGAGCAAGCATGGACTTCATGTTGTCAGCAACCCCAAGTCAAGAGCAGCAGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR TCA 72 bp AGGCAAGTGTGCAAAGAGATGTTGAGTCAAGAGGCCTaGGGTCAGCTGGGAACCCTGCTGGGCCAGCCATAC +
Preference number: 3 (lower is better)
Translates to: RQVCKEMLSQEA*GQLGTLLGQPY
Trigger: GTATGGCTGGCCCAGCAGGGTTCCCAGCTGACCTCAGGCCTCTTGACTCAACATCTCTTTGCACACTTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR TCA 72 bp GAACGTGGAGCTTACCAGTTCAACTACGCTGGTCAGTaGGCTCCAGGTATCCTCCTGCCTCCACCCAGCACT +
Preference number: 3 (lower is better)
Translates to: ERGAYQFNYAGQ*APGILLPPPST
Trigger: AGTGCTGGGTGGAGGCAGGAGGATACCTGGAGCTCACTGACCAGCGTAGTTGAACTGGTAAGCTCCACGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR GCA 72 bp CCTAGTGGCCTGGGACTTGGGGAAGAGACATTCCCTTaGGCACTTTCCTGGCACCAAACAGTGATGACCCCA +
Preference number: 3 (lower is better)
Translates to: PSGLGLGEETFP*ALSWHQTVMTP
Trigger: TGGGGTCATCACTGTTTGGTGCCAGGAAAGTGCGCAAGGGAATGTCTCTTCCCCAAGTCCCAGGCCACTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CCA 72 bp CGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATaGGCTTCGTTCTCATTCTCAACGCCACCTGATGCC +
Preference number: 3 (lower is better)
Translates to: RHLHPTGSQVSR*ASFSFSTPPDA
Trigger: GGCATCAGGTGGCGTTGAGAATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
3UTR CCA 72 bp CCCAGGAGGAGACCTCTGGAAGGAGACAAGAATGGCTaGAGTCACCCCATCACCCCATCATTGCCTGGAACT +
Preference number: 3 (lower is better)
Translates to: PRRRPLEGDKNG*SHPITPSLPGT
Trigger: AGTTCCAGGCAATGATGGGGTGATGGGGTGACTCCAGCCATTCTTGTCTCCTTCCAGAGGTCTCCTCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CCA 72 bp CAGAAACCCAGGACAGCGGTGTGGCTCAGTGCTGGTTaGCAGGGGTGGAAACTAGTGTGGGCTAAGGAAAAC +
Preference number: 3 (lower is better)
Translates to: QKPRTAVWLSAG*QGWKLVWAKEN
Trigger: GTTTTCCTTAGCCCACACTAGTTTCCACCCCTGCCAACCAGCACTGAGCCACACCGCTGTCCTGGGTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR GCA 72 bp ACCCTTGGGCTATTTTTAGTTGCTGGCTTTCCCCAGTaGCAACGTAGGAGGGCACAGTGGATGCCTCCACAG +
Preference number: 3 (lower is better)
Translates to: TLGLFLVAGFPQ*QRRRAQWMPPQ
Trigger: CTGTGGAGGCATCCACTGTGCCCTCCTACGTTGGCACTGGGGAAAGCCAGCAACTAAAAATAGCCCAAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CCA 72 bp CCTTCAGCTGGCCTTGCCCTTTCCAGAGCACGTGATTaGCCTGAGAAATGTCCTGTCATCCAAGCTGGCCAA +
Preference number: 3 (lower is better)
Translates to: PSAGLALSRARD*PEKCPVIQAGQ
Trigger: TTGGCCAGCTTGGATGACAGGACATTTCTCAGGCCAATCACGTGCTCTGGAAAGGGCAAGGCCAGCTGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CCA 72 bp AGGACAGCGGTGTGGCTCAGTGCTGGTTGGCAGGGGTaGAAACTAGTGTGGGCTAAGGAAAACCAGAAATCC +
Preference number: 3 (lower is better)
Translates to: RTAVWLSAGWQG*KLVWAKENQKS
Trigger: GGATTTCTGGTTTTCCTTAGCCCACACTAGTTTCCACCCCTGCCAACCAGCACTGAGCCACACCGCTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CCA 72 bp AGAACAGGGCAGAATTCTGACCACGATTCCCATCACTaGGAGGCACTCCTGCTGCTCTTGACTTGGGGTTGC +
Preference number: 3 (lower is better)
Translates to: RTGQNSDHDSHH*EALLLLLTWGC
Trigger: GCAACCCCAAGTCAAGAGCAGCAGGAGTGCCTCCCAGTGATGGGAATCGTGGTCAGAATTCTGCCCTGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR TCA 72 bp TGCAGTGGCTCGGTGGTAGTGATTGATTGCCCAGCATaGCCAAGGCCTGGATCTGAGTCTCTGTGCAACAAC +
Preference number: 3 (lower is better)
Translates to: CSGSVVVIDCPA*PRPGSESLCNN
Trigger: GTTGTTGCACAGAGACTCAGATCCAGGCCTTGGTCATGCTGGGCAATCAATCACTACCACCGAGCCACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR GCA 72 bp CCTCCACCCAGCACTGAGACTACAGGTGTGCATCTCTaGATCTGGCTTTTTACATGGCTGCTGGGGATCCAA +
Preference number: 3 (lower is better)
Translates to: PPPSTETTGVHL*IWLFTWLLGIQ
Trigger: TTGGATCCCCAGCAGCCATGTAAAAAGCCAGATGCAGAGATGCACACCTGTAGTCTCAGTGCTGGGTGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CCA 72 bp ATCACCCCATCATTGCCTGGAACTAGGCAGAAGCCCTaGGCTTCCCTATGTTCCTCAAGTCAGGGGTGGTTA +
Preference number: 3 (lower is better)
Translates to: ITPSLPGTRQKP*ASLCSSSQGWL
Trigger: TAACCACCCCTGACTTGAGGAACATAGGGAAGCCCAGGGCTTCTGCCTAGTTCCAGGCAATGATGGGGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR TCA 72 bp ACGATTCCCATCACTGGGAGGCACTCCTGCTGCTCTTaGCTTGGGGTTGCTGACAACATGAAGTCCATGCTT +
Preference number: 3 (lower is better)
Translates to: TIPITGRHSCCS*LGVADNMKSML
Trigger: AAGCATGGACTTCATGTTGTCAGCAACCCCAAGTCAAGAGCAGCAGGAGTGCCTCCCAGTGATGGGAATCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR TCA 72 bp ATTGCTTTTCCTGAAGAGCAGAACAGGGCAGAATTCTaGCCACGATTCCCATCACTGGGAGGCACTCCTGCT +
Preference number: 3 (lower is better)
Translates to: IAFPEEQNRAEF*PRFPSLGGTPA
Trigger: AGCAGGAGTGCCTCCCAGTGATGGGAATCGTGGTCAGAATTCTGCCCTGTTCTGCTCTTCAGGAAAAGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR GCA 72 bp TTCAGGGCCCTGTTACACTCTGTTTGTCACAGTGTCTaGAGGGTAAATGTGCAAAGGCTGCCAGACAGCTTC +
Preference number: 3 (lower is better)
Translates to: FRALLHSVCHSV*RVNVQRLPDSF
Trigger: GAAGCTGTCTGGCAGCCTTTGCACATTTACCCTGCAGACACTGTGACAAACAGAGTGTAACAGGGCCCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CCA 72 bp AAGTCTTGGTCTCCAGGAAGGCCCACTACTCCCCCTTaGAGCGTTTGGGAAAGTCATATCAGTCTTGGAGAA +
Preference number: 3 (lower is better)
Translates to: KSWSPGRPTTPP*SVWESHISLGE
Trigger: TTCTCCAAGACTGATATGACTTTCCCAAACGCTCCAAGGGGGAGTAGTGGGCCTTCCTGGAGACCAAGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CCA 72 bp CTTCTGTGGATCCAGGAAATAAAAAGAGAGAAGTCTTaGTCTCCAGGAAGGCCCACTACTCCCCCTTGGAGC +
Preference number: 3 (lower is better)
Translates to: LLWIQEIKREKS*SPGRPTTPPWS
Trigger: GCTCCAAGGGGGAGTAGTGGGCCTTCCTGGAGACCAAGACTTCTCTCTTTTTATTTCCTGGATCCACAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CCA 72 bp GTGTGCATCTCTGCATCTGGCTTTTTACATGGCTGCTaGGGATCCAAACTCGGGATATCATGCTTGTACCAC +
Preference number: 3 (lower is better)
Translates to: VCISASGFLHGC*GSKLGISCLYH
Trigger: GTGGTACAAGCATGATATCCCGAGTTTGGATCCCCAGCAGCCATGTAAAAAGCCAGATGCAGAGATGCACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CCA 72 bp GGCAGGCCCTTCTATGGGATATTTTGTGCACGTGTGTaGTATAGTGTGAAGGCCATGTGTTGGGTGTCTTCA +
Preference number: 3 (lower is better)
Translates to: GRPFYGIFCARV*YSVKAMCWVSS
Trigger: TGAAGACACCCAACACATGGCCTTCACACTATACCACACACGTGCACAAAATATCCCATAGAAGGGCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CCA 72 bp ACTACAGGTGTGCATCTCTGCATCTGGCTTTTTACATaGCTGCTGGGGATCCAAACTCGGGATATCATGCTT +
Preference number: 3 (lower is better)
Translates to: TTGVHLCIWLFT*LLGIQTRDIML
Trigger: AAGCATGATATCCCGAGTTTGGATCCCCAGCAGCCATGTAAAAAGCCAGATGCAGAGATGCACACCTGTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR-3UTR CAA 90 bp CTGCACGAGGTTTCACAGCTAGTGAAAGAAAGGCTGGGGTTTCAAGGATATAGACTCGGGATATCATGCTaGTACCACGGCCATTTTACC +
Preference number: 3 (lower is better)
Translates to: LHEVSQLVKERLGFQGYRLGISC*YHGHFT
Trigger: GGTAAAATGGCCGTGGTACAAGCATGATATCCCGAG...TCTATATCCTTGAAACCCCAGCCTTTCTTTCACTAGCTGTGAAACCTCGTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR TCA 72 bp ACACACACACACACACACGTGTTCCATTGCTTTTCCTaGAGAGCAGAACAGGGCAGAATTCTGACCACGATT +
Preference number: 3 (lower is better)
Translates to: THTHTHVFHCFS*RAEQGRILTTI
Trigger: AATCGTGGTCAGAATTCTGCCCTGTTCTGCTCTTCAGGAAAAGCAATGGAACACGTGTGTGTGTGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR TCA 72 bp TCTATGGGATATTTTGTGCACGTGTGTGGTATAGTGTaGAGGCCATGTGTTGGGTGTCTTCATTTGCTCTCC +
Preference number: 3 (lower is better)
Translates to: SMGYFVHVCGIV*RPCVGCLHLLS
Trigger: GGAGAGCAAATGAAGACACCCAACACATGGCCTTCACACTATACCACACACGTGCACAAAATATCCCATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CCA 72 bp GGCCAAAAGTCAACAACAAACAGTGACCACCTTCTGTaGATCCAGGAAATAAAAAGAGAGAAGTCTTGGTCT +
Preference number: 3 (lower is better)
Translates to: GQKSTTNSDHLL*IQEIKREKSWS
Trigger: AGACCAAGACTTCTCTCTTTTTATTTCCTGGATCCACAGAAGGTGGTCACTGTTTGTTGTTGACTTTTGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR TCA 90 bp AGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCCCAGCAGGAGGTGGTGGCGCTaGGCTGAGAGAAGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: SEAPSALWVPAVGSPHPSRRWWR*AERSGW
Trigger: CCAGCCGCTTCTCTCAGCTCAGCGCCACCACCTCCT...GCTGGGGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp GCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCCCAGCTGTGGCCTCCGCTCCACGGTGTaGACTGCCCCATCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: APSALWVPAVGSPHPSCGLRSTV*TAPSVL
Trigger: GAGCACAGATGGGGCAGTGCACACCGTGGAGCGGAG...GCCACAGCTGGGGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp GCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCCCAGCTGTGGCCTCCTGGACTGGGGCTaGTGTCCAGCGGGGAATGTG +
Preference number: 4 (lower is better)
Translates to: APSALWVPAVGSPHPSCGLLDWG*CPAGNV
Trigger: CACATTCCCCGCTGGACACCAGCCCCAGTCCAGGAG...GCCACAGCTGGGGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp GCCAGGCTGGAGCTGTGGACAAAGCTTCAGTCGGGCAGAAACCCAGGACAGCGGGTCCTCCTCCTGGACTaGGGCTGGTGTCCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: ARLELWTKLQSGRNPGQRVLLLD*GWCPAG
Trigger: CCCCGCTGGACACCAGCCCCAGTCCAGGAGGAGGAC...CCGCTGTCCTGGGTTTCTGCCCGACTGAAGCTTTGTCCACAGCTCCAGCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp CCACACCCCAGCTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCCGCCAGCTCAAGGACTaGCACAACATGTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: PHPSCGTAPSASNRVPGVRQLKD*HNMSRA
Trigger: GGCCCGGGACATGTTGTGCCAGTCCTTGAGCTGGCG...GACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAGCTGGGGTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR TCA 90 bp GCTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTGTGGTGGCGCTGAGCTaGGAGAAGCGGCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: AVAPRHLHPTGSQVSRWAVVALS*EKRLAQ
Trigger: CTGTGCCAGCCGCTTCTCTCAGCTCAGCGCCACCAC...AGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR TCA 90 bp GCCAGGCTGGAGCTGTGGACAAAGCTTCAGTCGGGCAGAAACCCAGGACAGCGGGTGGTGGCGCTGAGCTaGGAGAAGCGGCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: ARLELWTKLQSGRNPGQRVVALS*EKRLAQ
Trigger: CTGTGCCAGCCGCTTCTCTCAGCTCAGCGCCACCAC...CCGCTGTCCTGGGTTTCTGCCCGACTGAAGCTTTGTCCACAGCTCCAGCCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR TCA 90 bp GCTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTAGGAGGTGGTGGCGCTaGGCTGAGAGAAGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: AVAPRHLHPTGSQVSRWARRWWR*AERSGW
Trigger: CCAGCCGCTTCTCTCAGCTCAGCGCCACCACCTCCT...AGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp GCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCCCAGCTGTGGCAGGAGATCCACCTGGTaGTGCTTCCGCCAGCTCAAG +
Preference number: 4 (lower is better)
Translates to: APSALWVPAVGSPHPSCGRRSTW*CFRQLK
Trigger: CTTGAGCTGGCGGAAGCAGCACCAGGTGGATCTCCT...GCCACAGCTGGGGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp ACCCCAGCTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGAGGGGGCCGCCAGGTCTaGAGAAGGAGATCCACCTGG +
Preference number: 4 (lower is better)
Translates to: TPAVAPRHLHPTGSQVSRGGRQV*RRRSTW
Trigger: CCAGGTGGATCTCCTTCTGCAGACCTGGCGGCCCCC...TCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAGCTGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp GCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCCCAGCTGTGGCCCGGCAGATGAGGGGTaGCTCTACACGGCTGTAATC +
Preference number: 4 (lower is better)
Translates to: APSALWVPAVGSPHPSCGPADEG*LYTAVI
Trigger: GATTACAGCCGTGTAGAGGCACCCCTCATCTGCCGG...GCCACAGCTGGGGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp CGTGAAGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCCCACACCTGGGAGACTaGAGGCCACACTCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: REAKLPLHSGSLPWDHHTPHLGD*RPHSQG
Trigger: CCCCTGAGAGTGTGGCCTGCAGTCTCCCAGGTGTGG...GGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCTTCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp ACACCCCAGCTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTACGGACGTCCTCCTCCTaGACTGGGGCTGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: TPQLWHRAICIQQGPRCLRTSSS*TGAGVQ
Trigger: CTGGACACCAGCCCCAGTCCAGGAGGAGGACGTCCG...TAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAGCTGGGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp GCCAGGCTGGAGCTGTGGACAAAGCTTCAGTCGGGCAGAAACCCAGGACAGCGGCTCCGCTCCACGGTGTaGACTGCCCCATCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: ARLELWTKLQSGRNPGQRLRSTV*TAPSVL
Trigger: GAGCACAGATGGGGCAGTGCACACCGTGGAGCGGAG...CCGCTGTCCTGGGTTTCTGCCCGACTGAAGCTTTGTCCACAGCTCCAGCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp AGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCCCAGCAGATCCACCTGGTGCTaGTTCCGCCAGCTCAAGGAC +
Preference number: 4 (lower is better)
Translates to: SEAPSALWVPAVGSPHPSRSTWC*FRQLKD
Trigger: GTCCTTGAGCTGGCGGAAGCAGCACCAGGTGGATCT...GCTGGGGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp CTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCACTGGGGCACAAGCTaGCTGCGGACGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LWHRAICIQQGPRCLDGLHWGTS*LRTSSS
Trigger: GGAGGAGGACGTCCGCAGCCAGCTTGTGCCCCAGTG...AAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp CATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCAGGTCCCCAGCTCAGAAGCAGGGCCTaGGGCATCACTGGGACCCTC +
Preference number: 4 (lower is better)
Translates to: HSQRHLMPEARRLPAGPQLRSRA*GITGTL
Trigger: GAGGGTCCCAGTGATGCCCCAGGCCCTGCTTCTGAG...CTGGGGACCTGCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp TCAAGAGCCGTGAAGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCCTCACTCCAGGCTCCTaGGGACTGAGCTTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: SRAVKRSSLCTLGPCRGILTPGS*GLSLGA
Trigger: GGCACCCAAGCTCAGTCCCCAGGAGCCTGGAGTGAG...GATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCTTCACGGCTCTTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp ACACCCCAGCTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTACTCACTCCAGGCTCCTaGGGACTGAGCTTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: TPQLWHRAICIQQGPRCLLTPGS*GLSLGA
Trigger: GGCACCCAAGCTCAGTCCCCAGGAGCCTGGAGTGAG...TAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAGCTGGGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp AGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCCCAGCCAATCAGCTGCCCACTaGCTCTCACTCCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SEAPSALWVPAVGSPHPSQSAAH*LSLQAP
Trigger: AGGAGCCTGGAGTGAGAGCCAGTGGGCAGCTGATTG...GCTGGGGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp CCACACCCCAGCTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCACCATCGAGCCACTGTaGGACTGGCCAGAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: PHPSCGTAPSASNRVPGVTIEPL*DWPEEE
Trigger: TTCCTCCTCTGGCCAGTCCCACAGTGGCTCGATGGT...GACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAGCTGGGGTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp TTCTCATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCAGGTCCGGGGGCCGCCAGGTCTaGAGAAGGAGATCCACCTGG +
Preference number: 4 (lower is better)
Translates to: FSFSTPPDARSSQAASRSGGRQV*RRRSTW
Trigger: CCAGGTGGATCTCCTTCTGCAGACCTGGCGGCCCCC...GGACCTGCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp CACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCACTGGGGCACAAGCTaGCTGCGGACGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: HRAICIQQGPRCLDGLRSHWGTS*LRTSSS
Trigger: GGAGGAGGACGTCCGCAGCCAGCTTGTGCCCCAGTG...AGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp GCTTCGTTCTCATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCGGCCTGGGGCATCACTaGGACCCTCCATGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: ASFSFSTPPDARSSQAASGLGHH*DPPCPG
Trigger: CCCTGGACATGGAGGGTCCCAGTGATGCCCCAGGCC...GCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATGAGAACGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp CAGTCGGGCAGAAACCCAGGACAGCGGTGTGGCTCAGTGCTGGTTGGCAGGGGTAGAAGGAGATCCACCTaGTGCTGCTTCCGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: QSGRNPGQRCGSVLVGRGRRRST*CCFRQL
Trigger: GAGCTGGCGGAAGCAGCACCAGGTGGATCTCCTTCT...ACCCCTGCCAACCAGCACTGAGCCACACCGCTGTCCTGGGTTTCTGCCCGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp GCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCCCAGCTGTGGCTCAGATAGAGGGACTTaGGGACCATCCCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: APSALWVPAVGSPHPSCGSDRGT*GPSLLL
Trigger: CAGAAGGAGGGATGGTCCCCAAGTCCCTCTATCTGA...GCCACAGCTGGGGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp GCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCCCAGCTGTGGCCTTCTGGTATCTCCATaGCAACCTCATAGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: APSALWVPAVGSPHPSCGLLVSP*QPHRGS
Trigger: GGACCCCCTATGAGGTTGCCATGGAGATACCAGAAG...GCCACAGCTGGGGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp CTCAAGAGCCGTGAAGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATACAGCAGCTTGCACTTaGGGCCAGGGCTGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: LKSREAKLPLHSGSLPWDTAACT*GQGCAE
Trigger: CTCTGCACAGCCCTGGCCCCAAGTGCAAGCTGCTGT...ATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCTTCACGGCTCTTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp ACACCCCAGCTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGCTGAGAGAAGCGGCTaGCACAGGATTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: TPQLWHRAICIQQGPRCLAERSG*HRIPGW
Trigger: CCAGCCTGGAATCCTGTGCCAGCCGCTTCTCTCAGC...TAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAGCTGGGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR TCA 90 bp CTCAAGAGCCGTGAAGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATAACCAGTGCCGAAGCTaGACCAGGCAACTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LKSREAKLPLHSGSLPWDNQCRS*TRQLSC
Trigger: GCAGGAGAGTTGCCTGGTTCAGCTTCGGCACTGGTT...ATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCTTCACGGCTCTTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp ATGAAGTCCATGCTTGCTCACTGGGCCCCACAGCCAGAAACCACCCCTCTCAGCCATCCACTCGCAGCCTaGAGCTCCGCTCCACGGTGT +
Preference number: 4 (lower is better)
Translates to: MKSMLAHWAPQPETTPLSHPLAA*SSAPRC
Trigger: ACACCGTGGAGCGGAGCTGCAGGCTGCGAGTGGATG...GCTGAGAGGGGTGGTTTCTGGCTGTGGGGCCCAGTGAGCAAGCATGGACTTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp ATGAAGTCCATGCTTGCTCACTGGGCCCCACAGCCAGAAACCACCCCTCTCAGCCCACACCTGGGAGACTaGAGGCCACACTCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: MKSMLAHWAPQPETTPLSPHLGD*RPHSQG
Trigger: CCCCTGAGAGTGTGGCCTGCAGTCTCCCAGGTGTGG...GCTGAGAGGGGTGGTTTCTGGCTGTGGGGCCCAGTGAGCAAGCATGGACTTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp TTCTCATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCAGGTCCCTCCTGGACTGGGGCTaGTGTCCAGCGGGGAATGTG +
Preference number: 4 (lower is better)
Translates to: FSFSTPPDARSSQAASRSLLDWG*CPAGNV
Trigger: CACATTCCCCGCTGGACACCAGCCCCAGTCCAGGAG...GGACCTGCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp CGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATTCGTCCTCCTCCTGGACTaGGGCTGGTGTCCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: RHLHPTGSQVSRWASFSFVLLLD*GWCPAG
Trigger: CCCCGCTGGACACCAGCCCCAGTCCAGGAGGAGGAC...GAATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp TCAAGAGCCGTGAAGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCGACGTCATCCACACCTaGGAGACTGCAGGCCACACT +
Preference number: 4 (lower is better)
Translates to: SRAVKRSSLCTLGPCRGIDVIHT*ETAGHT
Trigger: AGTGTGGCCTGCAGTCTCCCAGGTGTGGATGACGTC...GATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCTTCACGGCTCTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp GCTGGAGTCACCCCATCACCCCATCATTGCCTGGAACTAGGCAGAAGCCCTGGGGCTGAGAGAAGCGGCTaGCACAGGATTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: AGVTPSPHHCLELGRSPGAERSG*HRIPGW
Trigger: CCAGCCTGGAATCCTGTGCCAGCCGCTTCTCTCAGC...CCCAGGGCTTCTGCCTAGTTCCAGGCAATGATGGGGTGATGGGGTGACTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR TCA 90 bp CTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTACAAATGCCGCATGTTaGGGCCCTCCAGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LWHRAICIQQGPRCLDGLTNAAC*GPPGPA
Trigger: TGCTGGACCTGGAGGGCCTCAACATGCGGCATTTGT...AAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp CCACACCCCAGCTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCAGGAAGCGCAGGATATaGTCGTCTTTGGGGATCTTG +
Preference number: 4 (lower is better)
Translates to: PHPSCGTAPSASNRVPGVRKRRI*SSLGIL
Trigger: CAAGATCCCCAAAGACGAGCATATCCTGCGCTTCCT...GACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAGCTGGGGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp CGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATTTGGGGCCAGGGCTGTaGAGAGCCGTCAGGACGTCA +
Preference number: 4 (lower is better)
Translates to: RAICIQQGPRCLDGLRSHLGPGL*RAVRTS
Trigger: TGACGTCCTGACGGCTCTGCACAGCCCTGGCCCCAA...ATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp CAGCCCTGGTCCCATCCTAGACTCCAGATCCAGGGGACAAGAGGTAGAACATCCTTGGGGCCAGGGCTGTaGAGAGCCGTCAGGACGTCA +
Preference number: 4 (lower is better)
Translates to: QPWSHPRLQIQGTRGRTSLGPGL*RAVRTS
Trigger: TGACGTCCTGACGGCTCTGCACAGCCCTGGCCCCAA...GGATGTTCTACCTCTTGTCCCCTGGATCTGGAGTCTAGGATGGGACCAGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp CATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCAGGTCCCCAGGTCCAGCGGGGAATGTaGGATGTTCCCTGGGAAATG +
Preference number: 4 (lower is better)
Translates to: HSQRHLMPEARRLPAGPQVQRGM*DVPWEM
Trigger: CATTTCCCAGGGAACATCCCACATTCCCCGCTGGAC...CTGGGGACCTGCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp GCAGCCTCTCAGCAGGGAGAGGGTGTGAGGCAAGTGTGCAAAGAGATGTTGAGTGGCCTGGGGCATCACTaGGACCCTCCATGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: AASQQGEGVRQVCKEMLSGLGHH*DPPCPG
Trigger: CCCTGGACATGGAGGGTCCCAGTGATGCCCCAGGCC...ACTCAACATCTCTTTGCACACTTGCCTCACACCCTCTCCCTGCTGAGAGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp GCCGTGAAGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACAGGGATCTTGCCTTTGTaGGTCTCCTGTAACCAGTGC +
Preference number: 4 (lower is better)
Translates to: AVKRSSLCTLGPCRGITTGILPL*VSCNQC
Trigger: GCACTGGTTACAGGAGACCCACAAAGGCAAGATCCC...TGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCTTCACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp CAGCCCTGGTCCCATCCTAGACTCCAGATCCAGGGGACAAGAGGTAGAACATCCCGCCAGCTCAAGGACTaGCACAACATGTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: QPWSHPRLQIQGTRGRTSRQLKD*HNMSRA
Trigger: GGCCCGGGACATGTTGTGCCAGTCCTTGAGCTGGCG...GGATGTTCTACCTCTTGTCCCCTGGATCTGGAGTCTAGGATGGGACCAGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp GCTTCGTTCTCATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCCTCCACTGCTGTAGCTaGTCAGCCTGCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ASFSFSTPPDARSSQAASLHCCS*SACSCS
Trigger: GGAGCAGGAGCAGGCTGACCAGCTACAGCAGTGGAG...GCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATGAGAACGAAGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
3UTR CAA 72 bp CCGCAGGCTAAGGAGAGCTTCCTAGTGGCCTGGGACTaGGGGAAGAGACATTCCCTTGCGCACTTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: PQAKESFLVAWD*GKRHSLAHFPG
Trigger: GCCAGGAAAGTGCGCAAGGGAATGTCTCTTCCCCAAGTCCCAGGCCACTAGGAAGCTCTCCTTAGCCTGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR TCA 90 bp CATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCAGGTCCCCAGGGACGTTTCTCTGAATaGAGACCACGTGCTCCACAC +
Preference number: 4 (lower is better)
Translates to: HSQRHLMPEARRLPAGPQGRFSE*RPRAPH
Trigger: GTGTGGAGCACGTGGTCTTCATTCAGAGAAACGTCC...CTGGGGACCTGCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR TCA 90 bp TTCTCATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCAGGTCCACAAATGCCGCATGTTaGGGCCCTCCAGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: FSFSTPPDARSSQAASRSTNAAC*GPPGPA
Trigger: TGCTGGACCTGGAGGGCCTCAACATGCGGCATTTGT...GGACCTGCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR TCA 90 bp CGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATGTAACATGGGAGCCCTaGATGCTCTGCCCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: RAICIQQGPRCLDGLRSHVTWEP*MLCPSR
Trigger: CCGGGAAGGGCAGAGCATTCAGGGCTCCCATGTTAC...ATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR TCA 90 bp GCTTCGTTCTCATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCCTCTCAGGGGAACTGTaGATCTGCCACTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: ASFSFSTPPDARSSQAASLSGEL*ICHWSR
Trigger: CCTGCTCCAGTGGCAGATTCACAGTTCCCCTGAGAG...GCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATGAGAACGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp CGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATTCCATCCACTCGCAGCCTaGAGCTCCGCTCCACGGTGT +
Preference number: 4 (lower is better)
Translates to: RHLHPTGSQVSRWASFSFHPLAA*SSAPRC
Trigger: ACACCGTGGAGCGGAGCTGCAGGCTGCGAGTGGATG...GAATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp AGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCCCAGCACATTGGCAGTGTACTaGTTCATGGCGATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SEAPSALWVPAVGSPHPSTLAVY*FMAIFS
Trigger: GGAGAAGATCGCCATGAAGCAGTACACTGCCAATGT...GCTGGGGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp TTCTCATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCAGGTCCTGTAGCTGGTCAGCCTaGTCCTGCTCCTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: FSFSTPPDARSSQAASRSCSWSA*SCSSSV
Trigger: GACAGAGGAGGAGCAGGAGCAGGCTGACCAGCTACA...GGACCTGCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATGAGAA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp GCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCCCAGCTGTGGCCATGACCAGCTCGAATaGATACTTGTATACTCGGAC +
Preference number: 4 (lower is better)
Translates to: APSALWVPAVGSPHPSCGHDQLE*ILVYSD
Trigger: GTCCGAGTATACAAGTATCCATTCGAGCTGGTCATG...GCCACAGCTGGGGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp CGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATTCCTCAGAAGCAGGGCCTaGGGCATCACTGGGACCCTC +
Preference number: 4 (lower is better)
Translates to: RHLHPTGSQVSRWASFSFLRSRA*GITGTL
Trigger: GAGGGTCCCAGTGATGCCCCAGGCCCTGCTTCTGAG...GAATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp ACCCCAGCTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATCCCTCGGAGCACACTaGCAGAATGGTAGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: TPAVAPRHLHPTGSQVSRSLGAH*QNGRFH
Trigger: GTGAAACCTACCATTCTGCCAGTGTGCTCCGAGGGA...TCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAGCTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp TCAAGAGCCGTGAAGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCTCCCTCGGAGCACACTaGCAGAATGGTAGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: SRAVKRSSLCTLGPCRGISLGAH*QNGRFH
Trigger: GTGAAACCTACCATTCTGCCAGTGTGCTCCGAGGGA...GATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCTTCACGGCTCTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp CTCAAGAGCCGTGAAGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCTTCTGGTATCTCCATaGCAACCTCATAGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LKSREAKLPLHSGSLPWDLLVSP*QPHRGS
Trigger: GGACCCCCTATGAGGTTGCCATGGAGATACCAGAAG...ATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCTTCACGGCTCTTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp GCCGTGAAGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACAGGTGCCTGCTTTGCATaGTACAGACTGAACACCACA +
Preference number: 4 (lower is better)
Translates to: AVKRSSLCTLGPCRGITTGACFA*YRLNTT
Trigger: TGTGGTGTTCAGTCTGTACCATGCAAAGCAGGCACC...TGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCTTCACGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp ATGAAGTCCATGCTTGCTCACTGGGCCCCACAGCCAGAAACCACCCCTCTCAGCGACGTCATCCACACCTaGGAGACTGCAGGCCACACT +
Preference number: 4 (lower is better)
Translates to: MKSMLAHWAPQPETTPLSDVIHT*ETAGHT
Trigger: AGTGTGGCCTGCAGTCTCCCAGGTGTGGATGACGTC...GCTGAGAGGGGTGGTTTCTGGCTGTGGGGCCCAGTGAGCAAGCATGGACTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR TCA 90 bp AGCTGGGAACCCTGCTGGGCCAGCCATACCTGCAGCAAGACCCCTTTCTGCCACTTCAGGACGTTTCTCTaGATGAAGACCACGTGCTCC +
Preference number: 4 (lower is better)
Translates to: SWEPCWASHTCSKTPFCHFRTFL*MKTTCS
Trigger: GGAGCACGTGGTCTTCATTCAGAGAAACGTCCTGAA...GTGGCAGAAAGGGGTCTTGCTGCAGGTATGGCTGGCCCAGCAGGGTTCCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR TCA 90 bp CTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTTACTGCCACTGTAGATaGGGAACTTCCGCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: LWHRAICIQQGPRCLDGLYCHCR*GTSAWC
Trigger: ACACCAGGCGGAAGTTCCTCATCTACAGTGGCAGTA...AAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp AGCTGGGAACCCTGCTGGGCCAGCCATACCTGCAGCAAGACCCCTTTCTGCCACAGGAAGCGCAGGATATaGTCGTCTTTGGGGATCTTG +
Preference number: 4 (lower is better)
Translates to: SWEPCWASHTCSKTPFCHRKRRI*SSLGIL
Trigger: CAAGATCCCCAAAGACGAGCATATCCTGCGCTTCCT...GTGGCAGAAAGGGGTCTTGCTGCAGGTATGGCTGGCCCAGCAGGGTTCCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp CGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATAGGAGATCCACCTGGTaGTGCTTCCGCCAGCTCAAG +
Preference number: 4 (lower is better)
Translates to: RAICIQQGPRCLDGLRSHRRSTW*CFRQLK
Trigger: CTTGAGCTGGCGGAAGCAGCACCAGGTGGATCTCCT...ATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp ACCCCAGCTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGAACAGAAAGAACGTGCTaGAGCAGAGCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: TPAVAPRHLHPTGSQVSRTERTC*SRASSP
Trigger: AGGAGAGGAAGCTCTGCTGCAGCACGTTCTTTCTGT...TCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAGCTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp ACCCCAGCTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGACAGTGTACTGCTTCATaGCGATCTTCTCCAACGTGC +
Preference number: 4 (lower is better)
Translates to: TPAVAPRHLHPTGSQVSRQCTAS*RSSPTC
Trigger: GCACGTTGGAGAAGATCGCCATGAAGCAGTACACTG...TCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAGCTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR TCA 90 bp GCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTTCAGGACGTTTCTCTaGATGAAGACCACGTGCTCC +
Preference number: 4 (lower is better)
Translates to: APRHLHPTGSQVSRWASFFRTFL*MKTTCS
Trigger: GGAGCACGTGGTCTTCATTCAGAGAAACGTCCTGAA...GAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR TCA 90 bp CGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATTCCTCTCAGGGGAACTGTaGATCTGCCACTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: RHLHPTGSQVSRWASFSFLSGEL*ICHWSR
Trigger: CCTGCTCCAGTGGCAGATTCACAGTTCCCCTGAGAG...GAATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp TTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCAGGTCCCCAGCATCTCTCAATGTAGTCTaGATCCAGCTTGTCCCCATC +
Preference number: 4 (lower is better)
Translates to: FSTPPDARSSQAASRSPASLNVV*IQLVPI
Trigger: GATGGGGACAAGCTGGATGCAGACTACATTGAGAGA...TGCTGGGGACCTGCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp GCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCCTTGGGTGCCTGCTTTaGATGGTACAGACTGAACAC +
Preference number: 4 (lower is better)
Translates to: APRHLHPTGSQVSRWASFLGCLL*MVQTEH
Trigger: GTGTTCAGTCTGTACCATGCAAAGCAGGCACCCAAG...GAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp GCAGCCTCTCAGCAGGGAGAGGGTGTGAGGCAAGTGTGCAAAGAGATGTTGAGTCCGGCAGATGAGGGGTaGCTCTACACGGCTGTAATC +
Preference number: 4 (lower is better)
Translates to: AASQQGEGVRQVCKEMLSPADEG*LYTAVI
Trigger: GATTACAGCCGTGTAGAGGCACCCCTCATCTGCCGG...ACTCAACATCTCTTTGCACACTTGCCTCACACCCTCTCCCTGCTGAGAGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp CATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATTCTCACGGGCCTTGTCCAGGTaGAAGTCTCGTGCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: HLHPTGSQVSRWASFSFSRALSR*KSRALR
Trigger: CCTGAGGGCACGAGACTTCCACCTGGACAAGGCCCG...TGAGAATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp CGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATTCAGAAGGAGATCCACCTaGTGCTGCTTCCGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RHLHPTGSQVSRWASFSFRRRST*CCFRQL
Trigger: GAGCTGGCGGAAGCAGCACCAGGTGGATCTCCTTCT...GAATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp TTCTCATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCAGGTCCTCAGATAGAGGGACTTaGGGACCATCCCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: FSFSTPPDARSSQAASRSSDRGT*GPSLLL
Trigger: CAGAAGGAGGGATGGTCCCCAAGTCCCTCTATCTGA...GGACCTGCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
3UTR CAA 72 bp GACAAGAATGGCTGGAGTCACCCCATCACCCCATCATaGCCTGGAACTAGGCAGAAGCCCTGGGCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: DKNGWSHPITPS*PGTRQKPWASL
Trigger: TAGGGAAGCCCAGGGCTTCTGCCTAGTTCCAGGCAATGATGGGGTGATGGGGTGACTCCAGCCATTCTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR TCA 90 bp TTTGAAGCTGCCATCAGCAGCCTCTCAGCAGGGAGAGGGTGTGAGGCAAGTGTGTACTGCCACTGTAGATaGGGAACTTCCGCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: FEAAISSLSAGRGCEASVYCHCR*GTSAWC
Trigger: ACACCAGGCGGAAGTTCCTCATCTACAGTGGCAGTA...CACACTTGCCTCACACCCTCTCCCTGCTGAGAGGCTGCTGATGGCAGCTTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR TCA 90 bp CGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATACACCACATCCCCTCTaGGGATATCAAAGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: RAICIQQGPRCLDGLRSHTPHPL*GYQSPR
Trigger: CCTGGGACTTTGATATCCTCAGAGGGGATGTGGTGT...ATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR TCA 90 bp CATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATTCTCAGTAACATGGGAGCCCTaGATGCTCTGCCCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: HLHPTGSQVSRWASFSFSVTWEP*MLCPSR
Trigger: CCGGGAAGGGCAGAGCATTCAGGGCTCCCATGTTAC...TGAGAATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp GAAAGGCCGTGGACAGCTTGGCAGGCCCTTCTATGGGATATTTTGTGCACGTGTCAGGTGGAAGTCTCGTaGCCTCAGGAAGCGCAGGAT +
Preference number: 4 (lower is better)
Translates to: ERPWTAWQALLWDILCTCQVEVS*PQEAQD
Trigger: ATCCTGCGCTTCCTGAGGGCACGAGACTTCCACCTG...ACACGTGCACAAAATATCCCATAGAAGGGCCTGCCAAGCTGTCCACGGCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp GAAAGGCCGTGGACAGCTTGGCAGGCCCTTCTATGGGATATTTTGTGCACGTGTAGATCCACCTGGTGCTaGTTCCGCCAGCTCAAGGAC +
Preference number: 4 (lower is better)
Translates to: ERPWTAWQALLWDILCTCRSTWC*FRQLKD
Trigger: GTCCTTGAGCTGGCGGAAGCAGCACCAGGTGGATCT...ACACGTGCACAAAATATCCCATAGAAGGGCCTGCCAAGCTGTCCACGGCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp GAAAGGCCGTGGACAGCTTGGCAGGCCCTTCTATGGGATATTTTGTGCACGTGTTGTAGCTGGTCAGCCTaGTCCTGCTCCTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: ERPWTAWQALLWDILCTCCSWSA*SCSSSV
Trigger: GACAGAGGAGGAGCAGGAGCAGGCTGACCAGCTACA...ACACGTGCACAAAATATCCCATAGAAGGGCCTGCCAAGCTGTCCACGGCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp ATGAAGTCCATGCTTGCTCACTGGGCCCCACAGCCAGAAACCACCCCTCTCAGCCAGTGTACTGCTTCATaGCGATCTTCTCCAACGTGC +
Preference number: 4 (lower is better)
Translates to: MKSMLAHWAPQPETTPLSQCTAS*RSSPTC
Trigger: GCACGTTGGAGAAGATCGCCATGAAGCAGTACACTG...GCTGAGAGGGGTGGTTTCTGGCTGTGGGGCCCAGTGAGCAAGCATGGACTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp CATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCAGGTCCCCAGATGTGGGATGTTCCCTaGGAAATGAGCTCATTCAGA +
Preference number: 4 (lower is better)
Translates to: HSQRHLMPEARRLPAGPQMWDVP*EMSSFR
Trigger: TCTGAATGAGCTCATTTCCCAGGGAACATCCCACAT...CTGGGGACCTGCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp CCAGCTTGTGCTAGATACACTGGCACACACCAGCAGCCTCTAAATCTGAGAGGCACCATCGAGCCACTGTaGGACTGGCCAGAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: PACARYTGTHQQPLNLRGTIEPL*DWPEEE
Trigger: TTCCTCCTCTGGCCAGTCCCACAGTGGCTCGATGGT...GCCTCTCAGATTTAGAGGCTGCTGGTGTGTGCCAGTGTATCTAGCACAAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR TCA 90 bp CGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATTCGGACGTTTCTCTGAATaGAGACCACGTGCTCCACAC +
Preference number: 4 (lower is better)
Translates to: RHLHPTGSQVSRWASFSFGRFSE*RPRAPH
Trigger: GTGTGGAGCACGTGGTCTTCATTCAGAGAAACGTCC...GAATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp TTCTCATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCAGGTCCACATTGGCAGTGTACTaGTTCATGGCGATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: FSFSTPPDARSSQAASRSTLAVY*FMAIFS
Trigger: GGAGAAGATCGCCATGAAGCAGTACACTGCCAATGT...GGACCTGCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATGAGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp CGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATCGTCTTTGGGGATCTTaGCTTTGTGGGTCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: RAICIQQGPRCLDGLRSHRLWGS*LCGSPV
Trigger: TACAGGAGACCCACAAAGGCAAGATCCCCAAAGACG...ATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp CATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATTCTCACAGGTGGAAGTCTCGTaGCCTCAGGAAGCGCAGGAT +
Preference number: 4 (lower is better)
Translates to: HLHPTGSQVSRWASFSFSQVEVS*PQEAQD
Trigger: ATCCTGCGCTTCCTGAGGGCACGAGACTTCCACCTG...TGAGAATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp GCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCCATGACCAGCTCGAATaGATACTTGTATACTCGGAC +
Preference number: 4 (lower is better)
Translates to: APRHLHPTGSQVSRWASFHDQLE*ILVYSD
Trigger: GTCCGAGTATACAAGTATCCATTCGAGCTGGTCATG...GAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
3UTR CAA 72 bp GTCTCCAGGAAGGCCCACTACTCCCCCTTGGAGCGTTaGGGAAAGTCATATCAGTCTTGGAGAAAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: VSRKAHYSPLER*GKSYQSWRKSL
Trigger: CAGGGACTTTCTCCAAGACTGATATGACTTTCCCAAACGCTCCAAGGGGGAGTAGTGGGCCTTCCTGGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp CAAAACAAAAACAATCACCACAGAAATGGACCGTGCAGTGGCTCGGTGGTAGTGCTCCACTGCTGTAGCTaGTCAGCCTGCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QNKNNHHRNGPCSGSVVVLHCCS*SACSCS
Trigger: GGAGCAGGAGCAGGCTGACCAGCTACAGCAGTGGAG...CACTACCACCGAGCCACTGCACGGTCCATTTCTGTGGTGATTGTTTTTGTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp GCATCTGGCTTTTTACATGGCTGCTGGGGATCCAAACTCGGGATATCATGCTTGCAATCAGCTGCCCACTaGCTCTCACTCCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: ASGFLHGCWGSKLGISCLQSAAH*LSLQAP
Trigger: AGGAGCCTGGAGTGAGAGCCAGTGGGCAGCTGATTG...CAAGCATGATATCCCGAGTTTGGATCCCCAGCAGCCATGTAAAAAGCCAGATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CAA 72 bp GAAGTCTTGGTCTCCAGGAAGGCCCACTACTCCCCCTaGGAGCGTTTGGGAAAGTCATATCAGTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: EVLVSRKAHYSP*ERLGKSYQSWR
Trigger: TCTCCAAGACTGATATGACTTTCCCAAACGCTCCAAGGGGGAGTAGTGGGCCTTCCTGGAGACCAAGACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp CGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATTCTCTCTCAATGTAGTCTaGATCCAGCTTGTCCCCATC +
Preference number: 4 (lower is better)
Translates to: RHLHPTGSQVSRWASFSFSLNVV*IQLVPI
Trigger: GATGGGGACAAGCTGGATGCAGACTACATTGAGAGA...GAATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp GCTTCGTTCTCATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCCCTAAAGTCTTCAGATaGCAGCACTTCACAGTAGTA +
Preference number: 4 (lower is better)
Translates to: ASFSFSTPPDARSSQAASPKVFR*QHFTVV
Trigger: TACTACTGTGAAGTGCTGGCATCTGAAGACTTTAGG...GCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATGAGAACGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp GAGGTAGAACATCCGGAAGTCTCGGCTTTTAAAAGAAAGTCAGAAGTAAAGGGTCGGACGTCCTCCTCCTaGACTGGGGCTGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: EVEHPEVSAFKRKSEVKGRTSSS*TGAGVQ
Trigger: CTGGACACCAGCCCCAGTCCAGGAGGAGGACGTCCG...ACCCTTTACTTCTGACTTTCTTTTAAAAGCCGAGACTTCCGGATGTTCTACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp CATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATTCTCAGGGATCTTGCCTTTGTaGGTCTCCTGTAACCAGTGC +
Preference number: 4 (lower is better)
Translates to: HLHPTGSQVSRWASFSFSGILPL*VSCNQC
Trigger: GCACTGGTTACAGGAGACCCACAAAGGCAAGATCCC...TGAGAATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp AAACGCCAAAGAAAGACTGAGACTGGCCAAAAGTCAACAACAAACAGTGACCACCGGGCCTTGTCCAGGTaGAAGTCTCGTGCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: KRQRKTETGQKSTTNSDHRALSR*KSRALR
Trigger: CCTGAGGGCACGAGACTTCCACCTGGACAAGGCCCG...GTGGTCACTGTTTGTTGTTGACTTTTGGCCAGTCTCAGTCTTTCTTTGGCGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp CCAGCTTGTGCTAGATACACTGGCACACACCAGCAGCCTCTAAATCTGAGAGGCGGTGCCTGCTTTGCATaGTACAGACTGAACACCACA +
Preference number: 4 (lower is better)
Translates to: PACARYTGTHQQPLNLRGGACFA*YRLNTT
Trigger: TGTGGTGTTCAGTCTGTACCATGCAAAGCAGGCACC...GCCTCTCAGATTTAGAGGCTGCTGGTGTGTGCCAGTGTATCTAGCACAAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp CTGCACGAGGTTTCACAGCTAGTGAAAGAAAGGCTGGGGTTTCAAGGATATAGAACAGCAGCTTGCACTTaGGGCCAGGGCTGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: LHEVSQLVKERLGFQGYRTAACT*GQGCAE
Trigger: CTCTGCACAGCCCTGGCCCCAAGTGCAAGCTGCTGT...TCTATATCCTTGAAACCCCAGCCTTTCTTTCACTAGCTGTGAAACCTCGTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR TCA 90 bp GCATCTGGCTTTTTACATGGCTGCTGGGGATCCAAACTCGGGATATCATGCTTGACACCACATCCCCTCTaGGGATATCAAAGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: ASGFLHGCWGSKLGISCLTPHPL*GYQSPR
Trigger: CCTGGGACTTTGATATCCTCAGAGGGGATGTGGTGT...CAAGCATGATATCCCGAGTTTGGATCCCCAGCAGCCATGTAAAAAGCCAGATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp CGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATCGATCTTCTCCAACGTaGTTTCAAAGCCAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: RAICIQQGPRCLDGLRSHRSSPT*FQSQRK
Trigger: CTTTCTTTGGCTTTGAAAGCACGTTGGAGAAGATCG...ATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp CAGCCCTGGTCCCATCCTAGACTCCAGATCCAGGGGACAAGAGGTAGAACATCCCCTAAAGTCTTCAGATaGCAGCACTTCACAGTAGTA +
Preference number: 4 (lower is better)
Translates to: QPWSHPRLQIQGTRGRTSPKVFR*QHFTVV
Trigger: TACTACTGTGAAGTGCTGGCATCTGAAGACTTTAGG...GGATGTTCTACCTCTTGTCCCCTGGATCTGGAGTCTAGGATGGGACCAGGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CAA 72 bp CTCCCCCTTGGAGCGTTTGGGAAAGTCATATCAGTCTaGGAGAAAGTCCCTGAGTCAGATCAGTTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: LPLGAFGKVISV*EKVPESDQFQD
Trigger: ATCCTGGAACTGATCTGACTCAGGGACTTTCTCCAAGACTGATATGACTTTCCCAAACGCTCCAAGGGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp CAAAACAAAAACAATCACCACAGAAATGGACCGTGCAGTGGCTCGGTGGTAGTGCGTCTTTGGGGATCTTaGCTTTGTGGGTCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: QNKNNHHRNGPCSGSVVVRLWGS*LCGSPV
Trigger: TACAGGAGACCCACAAAGGCAAGATCCCCAAAGACG...CACTACCACCGAGCCACTGCACGGTCCATTTCTGTGGTGATTGTTTTTGTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR CCA 90 bp AAACGCCAAAGAAAGACTGAGACTGGCCAAAAGTCAACAACAAACAGTGACCACGTCCAGCGGGGAATGTaGGATGTTCCCTGGGAAATG +
Preference number: 4 (lower is better)
Translates to: KRQRKTETGQKSTTNSDHVQRGM*DVPWEM
Trigger: CATTTCCCAGGGAACATCCCACATTCCCCGCTGGAC...GTGGTCACTGTTTGTTGTTGACTTTTGGCCAGTCTCAGTCTTTCTTTGGCGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp AAACGCCAAAGAAAGACTGAGACTGGCCAAAAGTCAACAACAAACAGTGACCACACAGAAAGAACGTGCTaGAGCAGAGCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: KRQRKTETGQKSTTNSDHTERTC*SRASSP
Trigger: AGGAGAGGAAGCTCTGCTGCAGCACGTTCTTTCTGT...GTGGTCACTGTTTGTTGTTGACTTTTGGCCAGTCTCAGTCTTTCTTTGGCGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR GCA 90 bp TACATGCTATGCCTCAATCCTAATTTCTACATGGTAAGCCACTCTCTAGGCAAACTTGGGTGCCTGCTTTaGATGGTACAGACTGAACAC +
Preference number: 4 (lower is better)
Translates to: YMLCLNPNFYMVSHSLGKLGCLL*MVQTEH
Trigger: GTGTTCAGTCTGTACCATGCAAAGCAGGCACCCAAG...TTTGCCTAGAGAGTGGCTTACCATGTAGAAATTAGGATTGAGGCATAGCATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
3UTR CAA 72 bp TCATTGAAAATATCACTAATTGCTGCTCGTGGTGATTaGGAGACAACTGGTTTTCAATGTCTCTCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: SLKISLIAARGD*ETTGFQCLSRG
Trigger: TCCTCTAGAGAGACATTGAAAACCAGTTGTCTCCAAATCACCACGAGCAGCAATTAGTGATATTTTCAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS GCA 90 bp CACCAGCAATCTTCCGCAGCAGCCGCGGGGCATCCACTCGCAGCCTaGAGCTCCGCTCCACGGTGTGCACTGCCCCATCTGTGCTCCGCC +
Preference number: 5 (lower is better)
Translates to: HQQSSAAAAGHPLAA*SSAPRCALPHLCSA
Trigger: GGCGGAGCACAGATGGGGCAGTGCACACCGTGGAGCGGAGCTGCAGGCTGCGAGTGGATGCCCCGCGGCTGCTGCGGAAGATTGCTGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS CCA 90 bp CTGGGACCCTCCATGTCCAGGGAGCTAGGGCACTGGGGCACAAGCTaGCTGCGGACGTCCTCCTCCTGGACTGGGGCTGGTGTCCAGCGG +
Preference number: 5 (lower is better)
Translates to: LGPSMSRELGHWGTS*LRTSSSWTGAGVQR
Trigger: CCGCTGGACACCAGCCCCAGTCCAGGAGGAGGACGTCCGCAGCCAGCTTGTGCCCCAGTGCCCTAGCTCCCTGGACATGGAGGGTCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS CCA 90 bp CCTGGGGCATCACTGGGACCCTCCATGTCCAGGGAGCTAGGGCACTaGGGCACAAGCTGGCTGCGGACGTCCTCCTCCTGGACTGGGGCT +
Preference number: 5 (lower is better)
Translates to: PGASLGPSMSRELGH*GTSWLRTSSSWTGA
Trigger: AGCCCCAGTCCAGGAGGAGGACGTCCGCAGCCAGCTTGTGCCCCAGTGCCCTAGCTCCCTGGACATGGAGGGTCCCAGTGATGCCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS GCA 90 bp GGGGGAGGGGGCCGCCAGGTCTGCAGAAGGAGATCCACCTGGTGCTaGTTCCGCCAGCTCAAGGACTGGCACAACATGTCCCGGGCCTTG +
Preference number: 5 (lower is better)
Translates to: GGGGRQVCRRRSTWC*FRQLKDWHNMSRAL
Trigger: CAAGGCCCGGGACATGTTGTGCCAGTCCTTGAGCTGGCGGAAGCAGCACCAGGTGGATCTCCTTCTGCAGACCTGGCGGCCCCCTCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS GCA 90 bp CTCGCAGCCTGCAGCTCCGCTCCACGGTGTGCACTGCCCCATCTGTaGTCCGCCACTCGCCCAGGACTTCACTCCCCAGAAAGACTGGGA +
Preference number: 5 (lower is better)
Translates to: LAACSSAPRCALPHL*SATRPGLHSPERLG
Trigger: TCCCAGTCTTTCTGGGGAGTGAAGTCCTGGGCGAGTGGCGGAGCACAGATGGGGCAGTGCACACCGTGGAGCGGAGCTGCAGGCTGCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS CCA 90 bp AGGGCACTGGGGCACAAGCTGGCTGCGGACGTCCTCCTCCTGGACTaGGGCTGGTGTCCAGCGGGGAATGTGGGATGTTCCCTGGGAAAT +
Preference number: 5 (lower is better)
Translates to: RALGHKLAADVLLLD*GWCPAGNVGCSLGN
Trigger: ATTTCCCAGGGAACATCCCACATTCCCCGCTGGACACCAGCCCCAGTCCAGGAGGAGGACGTCCGCAGCCAGCTTGTGCCCCAGTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CAA 90 bp CGTGAAGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCCACAAATGCCGCATGTaGAGGCCCTCCAGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: REAKLPLHSGSLPWDHHTHKCRM*RPSRSS
Trigger: GCTGGACCTGGAGGGCCTCAACATGCGGCATTTGTG...GGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCTTCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CAA 90 bp CGTGAAGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCTCCTGGGGACTGAGCTaGGGTGCCTGCTTTGCATGG +
Preference number: 5 (lower is better)
Translates to: REAKLPLHSGSLPWDHHTSWGLS*GACFAW
Trigger: CCATGCAAAGCAGGCACCCAAGCTCAGTCCCCAGGA...GGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCTTCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS CCA 90 bp CTTGGGGCCAGGGCTGTGCAGAGCCGTCAGGACGTCATCCACACCTaGGAGACTGCAGGCCACACTCTCAGGGGAACTGTGAATCTGCCA +
Preference number: 5 (lower is better)
Translates to: LGARAVQSRQDVIHT*ETAGHTLRGTVNLP
Trigger: TGGCAGATTCACAGTTCCCCTGAGAGTGTGGCCTGCAGTCTCCCAGGTGTGGATGACGTCCTGACGGCTCTGCACAGCCCTGGCCCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CAA 90 bp CATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCAGGTCCCCAGTCCTGGGGACTGAGCTaGGGTGCCTGCTTTGCATGG +
Preference number: 5 (lower is better)
Translates to: HSQRHLMPEARRLPAGPQSWGLS*GACFAW
Trigger: CCATGCAAAGCAGGCACCCAAGCTCAGTCCCCAGGA...CTGGGGACCTGCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS CCA 90 bp TGCAGAAGGAGATCCACCTGGTGCTGCTTCCGCCAGCTCAAGGACTaGCACAACATGTCCCGGGCCTTGTCCAGGTGGAAGTCTCGTGCC +
Preference number: 5 (lower is better)
Translates to: CRRRSTWCCFRQLKD*HNMSRALSRWKSRA
Trigger: GGCACGAGACTTCCACCTGGACAAGGCCCGGGACATGTTGTGCCAGTCCTTGAGCTGGCGGAAGCAGCACCAGGTGGATCTCCTTCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CAA 90 bp AGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCCCAGCTCGTCTTTGGGGATCTaGCCTTTGTGGGTCTCCTGT +
Preference number: 5 (lower is better)
Translates to: SEAPSALWVPAVGSPHPSSSLGI*PLWVSC
Trigger: ACAGGAGACCCACAAAGGCAAGATCCCCAAAGACGA...GCTGGGGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CAA 90 bp TCAAGAGCCGTGAAGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCAACATGTCCCGGGCCTaGTCCAGGTGGAAGTCTCGT +
Preference number: 5 (lower is better)
Translates to: SRAVKRSSLCTLGPCRGINMSRA*SRWKSR
Trigger: ACGAGACTTCCACCTGGACAAGGCCCGGGACATGTT...GATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCTTCACGGCTCTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CAA 90 bp CGTGAAGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCACCACACCCGCCTGGTGTTCTCATaGATGAAGGGGCTGACCAGT +
Preference number: 5 (lower is better)
Translates to: REAKLPLHSGSLPWDHHTRLVFS*MKGLTS
Trigger: ACTGGTCAGCCCCTTCATCAATGAGAACACCAGGCG...GGTGTGGTGATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCTTCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS GCA 90 bp ACCTCGATCATCCGCAGTAGGGCTTTCACTCCAGGTCGCCACAAATaGCGCATGTTGAGGCCCTCCAGGTCCAGCAAGCAGGTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: TSIIRSRAFTPGRHK*RMLRPSRSSKQVQE
Trigger: CTCCTGGACCTGCTTGCTGGACCTGGAGGGCCTCAACATGCGGCATTTGTGGCGACCTGGAGTGAAAGCCCTACTGCGGATGATCGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS GCA 90 bp CTGCCCACTGGCTCTCACTCCAGGCTCCTGGGGACTGAGCTTGGGTaGCTGCTTTGCATGGTACAGACTGAACACCACATCCCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: LPTGSHSRLLGTELG*LLCMVQTEHHIPSE
Trigger: CTCAGAGGGGATGTGGTGTTCAGTCTGTACCATGCAAAGCAGGCACCCAAGCTCAGTCCCCAGGAGCCTGGAGTGAGAGCCAGTGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS GCA 90 bp AACATGGGAGCCCTGAATGCTCTGCCCTTCCCGGCAGATGAGGGGTaGCTCTACACGGCTGTAATCCACCCCCAGGATCCAGCTCTTGTC +
Preference number: 5 (lower is better)
Translates to: NMGALNALPFPADEG*LYTAVIHPQDPALV
Trigger: GACAAGAGCTGGATCCTGGGGGTGGATTACAGCCGTGTAGAGGCACCCCTCATCTGCCGGGAAGGGCAGAGCATTCAGGGCTCCCATGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS CCA 90 bp CGCCAGCTCAAGGACTGGCACAACATGTCCCGGGCCTTGTCCAGGTaGAAGTCTCGTGCCCTCAGGAAGCGCAGGATATGCTCGTCTTTG +
Preference number: 5 (lower is better)
Translates to: RQLKDWHNMSRALSR*KSRALRKRRICSSL
Trigger: CAAAGACGAGCATATCCTGCGCTTCCTGAGGGCACGAGACTTCCACCTGGACAAGGCCCGGGACATGTTGTGCCAGTCCTTGAGCTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CAA 90 bp GCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCCCCAGGATCCAGCTCTaGTCAATCAGCTGCCCACTG +
Preference number: 5 (lower is better)
Translates to: APRHLHPTGSQVSRWASFPRIQL*SISCPL
Trigger: CAGTGGGCAGCTGATTGACAAGAGCTGGATCCTGGG...GAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CAA 90 bp CTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGCCTGGTGTTCTCATaGATGAAGGGGCTGACCAGT +
Preference number: 5 (lower is better)
Translates to: LWHRAICIQQGPRCLDGLRLVFS*MKGLTS
Trigger: ACTGGTCAGCCCCTTCATCAATGAGAACACCAGGCG...AAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS GCA 90 bp CCACTGGCTCTCACTCCAGGCTCCTGGGGACTGAGCTTGGGTGCCTaGTTTGCATGGTACAGACTGAACACCACATCCCCTCTGAGGATA +
Preference number: 5 (lower is better)
Translates to: PLALTPGSWGLSLGA*FAWYRLNTTSPLRI
Trigger: TATCCTCAGAGGGGATGTGGTGTTCAGTCTGTACCATGCAAAGCAGGCACCCAAGCTCAGTCCCCAGGAGCCTGGAGTGAGAGCCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS CCA 90 bp GACATCTCTCAATGTAGTCTGCATCCAGCTTGTCCCCATCCGCTATaGCCATCTCAGAAGCAGGGCCTGGGGCATCACTGGGACCCTCCA +
Preference number: 5 (lower is better)
Translates to: DISQCSLHPACPHPL*PSQKQGLGHHWDPP
Trigger: TGGAGGGTCCCAGTGATGCCCCAGGCCCTGCTTCTGAGATGGCCATAGCGGATGGGGACAAGCTGGATGCAGACTACATTGAGAGATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS CCA 90 bp AGTCTTCAGATGCCAGCACTTCACAGTAGTACAGCAGCTTGCACTTaGGGCCAGGGCTGTGCAGAGCCGTCAGGACGTCATCCACACCTG +
Preference number: 5 (lower is better)
Translates to: SLQMPALHSSTAACT*GQGCAEPSGRHPHL
Trigger: CAGGTGTGGATGACGTCCTGACGGCTCTGCACAGCCCTGGCCCCAAGTGCAAGCTGCTGTACTACTGTGAAGTGCTGGCATCTGAAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CAA 90 bp ACACCCCAGCTGTGGCACCGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTATTCCCCCTCTTGACATaGGCAGTGTACTGCTTCATG +
Preference number: 5 (lower is better)
Translates to: TPQLWHRAICIQQGPRCLFPLLT*AVYCFM
Trigger: CATGAAGCAGTACACTGCCAATGTCAAGAGGGGGAA...TAGACACCTGGGACCCTGTTGGATGCAGATGGCGCGGTGCCACAGCTGGGGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CAA 90 bp TTCTCATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCAGGTCCACCTCCTTCCCCCTCTaGACATTGGCAGTGTACTGC +
Preference number: 5 (lower is better)
Translates to: FSFSTPPDARSSQAASRSTSFPL*TLAVYC
Trigger: GCAGTACACTGCCAATGTCAAGAGGGGGAAGGAGGT...GGACCTGCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CAA 90 bp CGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATTCCACAAATGCCGCATGTaGAGGCCCTCCAGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: RHLHPTGSQVSRWASFSFHKCRM*RPSRSS
Trigger: GCTGGACCTGGAGGGCCTCAACATGCGGCATTTGTG...GAATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS CCA 90 bp CTGGTATCTCCATGGCAACCTCATAGGGGGTCCCTCGGAGCACACTaGCAGAATGGTAGGTTTCACTCCACTGCTGTAGCTGGTCAGCCT +
Preference number: 5 (lower is better)
Translates to: LVSPWQPHRGSLGAH*QNGRFHSTAVAGQP
Trigger: AGGCTGACCAGCTACAGCAGTGGAGTGAAACCTACCATTCTGCCAGTGTGCTCCGAGGGACCCCCTATGAGGTTGCCATGGAGATACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CAA 90 bp TCAAGAGCCGTGAAGCGAAGCTCCCTCTGCACTCTGGGTCCCTGCCGTGGGATCTTCTGTCCTTCCTCATaGACAGAAAGAACGTGCTGC +
Preference number: 5 (lower is better)
Translates to: SRAVKRSSLCTLGPCRGIFCPSS*TERTCC
Trigger: GCAGCACGTTCTTTCTGTCAATGAGGAAGGACAGAA...GATCCCACGGCAGGGACCCAGAGTGCAGAGGGAGCTTCGCTTCACGGCTCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS TCA 90 bp CTATCAGCAGCGTTCTCTCTCTCCAGTTCAGGACGTTTCTCTGAATaGAGACCACGTGCTCCACACCAGCAATCTTCCGCAGCAGCCGCG +
Preference number: 5 (lower is better)
Translates to: LSAAFSLSSSGRFSE*RPRAPHQQSSAAAA
Trigger: CGCGGCTGCTGCGGAAGATTGCTGGTGTGGAGCACGTGGTCTTCATTCAGAGAAACGTCCTGAACTGGAGAGAGAGAACGCTGCTGATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS GCA 90 bp CTCCTGCATGGGACTGAGATGGCCCAGACATCTCTCAATGTAGTCTaGATCCAGCTTGTCCCCATCCGCTATGGCCATCTCAGAAGCAGG +
Preference number: 5 (lower is better)
Translates to: LLHGTEMAQTSLNVV*IQLVPIRYGHLRSR
Trigger: CCTGCTTCTGAGATGGCCATAGCGGATGGGGACAAGCTGGATGCAGACTACATTGAGAGATGTCTGGGCCATCTCAGTCCCATGCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS GCA 90 bp GGCTCTCACTCCAGGCTCCTGGGGACTGAGCTTGGGTGCCTGCTTTaGATGGTACAGACTGAACACCACATCCCCTCTGAGGATATCAAA +
Preference number: 5 (lower is better)
Translates to: GSHSRLLGTELGCLL*MVQTEHHIPSEDIK
Trigger: TTTGATATCCTCAGAGGGGATGTGGTGTTCAGTCTGTACCATGCAAAGCAGGCACCCAAGCTCAGTCCCCAGGAGCCTGGAGTGAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS CCA 90 bp CTCACTCCAGGCTCCTGGGGACTGAGCTTGGGTGCCTGCTTTGCATaGTACAGACTGAACACCACATCCCCTCTGAGGATATCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: LTPGSWGLSLGACFA*YRLNTTSPLRISKS
Trigger: GGACTTTGATATCCTCAGAGGGGATGTGGTGTTCAGTCTGTACCATGCAAAGCAGGCACCCAAGCTCAGTCCCCAGGAGCCTGGAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CAA 90 bp GCTTCGTTCTCATTCTCAACGCCACCTGATGCCAGAAGCTCGCAGGCTGCCAGCTTCCCCCTCTTGACATaGGCAGTGTACTGCTTCATG +
Preference number: 5 (lower is better)
Translates to: ASFSFSTPPDARSSQAASFPLLT*AVYCFM
Trigger: CATGAAGCAGTACACTGCCAATGTCAAGAGGGGGAA...GCTGGCAGCCTGCGAGCTTCTGGCATCAGGTGGCGTTGAGAATGAGAACGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CAA 90 bp GTCTTGGTCTCCAGGAAGGCCCACTACTCCCCCTTGGAGCGTTTGGGAAAGTCATTGGGGATCTTGCCTTaGTGGGTCTCCTGTAACCAG +
Preference number: 5 (lower is better)
Translates to: VLVSRKAHYSPLERLGKSLGILP*WVSCNQ
Trigger: CTGGTTACAGGAGACCCACAAAGGCAAGATCCCCAA...TGACTTTCCCAAACGCTCCAAGGGGGAGTAGTGGGCCTTCCTGGAGACCAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR CAA 90 bp CCAGCTTGTGCTAGATACACTGGCACACACCAGCAGCCTCTAAATCTGAGAGGCAACATGTCCCGGGCCTaGTCCAGGTGGAAGTCTCGT +
Preference number: 5 (lower is better)
Translates to: PACARYTGTHQQPLNLRGNMSRA*SRWKSR
Trigger: ACGAGACTTCCACCTGGACAAGGCCCGGGACATGTT...GCCTCTCAGATTTAGAGGCTGCTGGTGTGTGCCAGTGTATCTAGCACAAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR CAA 90 bp GAAAGGCCGTGGACAGCTTGGCAGGCCCTTCTATGGGATATTTTGTGCACGTGTCCCAGGATCCAGCTCTaGTCAATCAGCTGCCCACTG +
Preference number: 5 (lower is better)
Translates to: ERPWTAWQALLWDILCTCPRIQL*SISCPL
Trigger: CAGTGGGCAGCTGATTGACAAGAGCTGGATCCTGGG...ACACGTGCACAAAATATCCCATAGAAGGGCCTGCCAAGCTGTCCACGGCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS TCA 90 bp GCATCTATCAGCAGCGTTCTCTCTCTCCAGTTCAGGACGTTTCTCTaGATGAAGACCACGTGCTCCACACCAGCAATCTTCCGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: ASISSVLSLQFRTFL*MKTTCSTPAIFRSS
Trigger: GCTGCTGCGGAAGATTGCTGGTGTGGAGCACGTGGTCTTCATTCAGAGAAACGTCCTGAACTGGAGAGAGAGAACGCTGCTGATAGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS TCA 90 bp CGGCAGCTCTCCTTCACTGTCACTCGGCTCGCAAACGTCTCATTGTaGGCATCTATCAGCAGCGTTCTCTCTCTCCAGTTCAGGACGTTT +
Preference number: 5 (lower is better)
Translates to: RQLSFTVTRLANVSL*ASISSVLSLQFRTF
Trigger: AAACGTCCTGAACTGGAGAGAGAGAACGCTGCTGATAGATGCTCACAATGAGACGTTTGCGAGCCGAGTGACAGTGAAGGAGAGCTGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS TCA 90 bp GTAACCAGTGCCGAAGCTGAACCAGGCAACTCTCCTGCATGGGACTaGGATGGCCCAGACATCTCTCAATGTAGTCTGCATCCAGCTTGT +
Preference number: 5 (lower is better)
Translates to: VTSAEAEPGNSPAWD*DGPDISQCSLHPAC
Trigger: ACAAGCTGGATGCAGACTACATTGAGAGATGTCTGGGCCATCTCAGTCCCATGCAGGAGAGTTGCCTGGTTCAGCTTCGGCACTGGTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CAA 90 bp CGCGCCATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATAGCTCGAATGGATACTaGTATACTCGGACAGGAGAC +
Preference number: 5 (lower is better)
Translates to: RAICIQQGPRCLDGLRSHSSNGY*YTRTGD
Trigger: GTCTCCTGTCCGAGTATACAAGTATCCATTCGAGCT...ATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATGGCGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CAA 90 bp GAAAGGCCGTGGACAGCTTGGCAGGCCCTTCTATGGGATATTTTGTGCACGTGTTCGTCTTTGGGGATCTaGCCTTTGTGGGTCTCCTGT +
Preference number: 5 (lower is better)
Translates to: ERPWTAWQALLWDILCTCSSLGI*PLWVSC
Trigger: ACAGGAGACCCACAAAGGCAAGATCCCCAAAGACGA...ACACGTGCACAAAATATCCCATAGAAGGGCCTGCCAAGCTGTCCACGGCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR CAA 90 bp CATCTGCATCCAACAGGGTCCCAGGTGTCTAGATGGGCTTCGTTCTCATTCTCATTGGGGATCTTGCCTTaGTGGGTCTCCTGTAACCAG +
Preference number: 5 (lower is better)
Translates to: HLHPTGSQVSRWASFSFSLGILP*WVSCNQ
Trigger: CTGGTTACAGGAGACCCACAAAGGCAAGATCCCCAA...TGAGAATGAGAACGAAGCCCATCTAGACACCTGGGACCCTGTTGGATGCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS-3UTR CAA 90 bp GCGCAGCCAGCTTGTGCTAGATACACTGGCACACACCAGCAGCCTCTAAATCTGTTCTGTCCTTCCTCATaGACAGAAAGAACGTGCTGC +
Preference number: 5 (lower is better)
Translates to: AQPACARYTGTHQQPLNLFCPSS*TERTCC
Trigger: GCAGCACGTTCTTTCTGTCAATGAGGAAGGACAGAA...CAGATTTAGAGGCTGCTGGTGTGTGCCAGTGTATCTAGCACAAGCTGGCTGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS-3UTR CAA 90 bp GCATCTGGCTTTTTACATGGCTGCTGGGGATCCAAACTCGGGATATCATGCTTGAGCTCGAATGGATACTaGTATACTCGGACAGGAGAC +
Preference number: 5 (lower is better)
Translates to: ASGFLHGCWGSKLGISCLSSNGY*YTRTGD
Trigger: GTCTCCTGTCCGAGTATACAAGTATCCATTCGAGCT...CAAGCATGATATCCCGAGTTTGGATCCCCAGCAGCCATGTAAAAAGCCAGATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230616.2
CDS GCA 72 bp GCATCCACTCGCAGCCTGCAGCTCCGCTCCACGGTGTaGACTGCCCCATCTGTGCTCCGCCACTCGCCCAGG +
Preference number: 6 (lower is better)
Translates to: ASTRSLQLRSTV*TAPSVLRHSPR
Trigger: CCTGGGCGAGTGGCGGAGCACAGATGGGGCAGTGCACACCGTGGAGCGGAGCTGCAGGCTGCGAGTGGATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS GCA 72 bp TCTTCCGCAGCAGCCGCGGGGCATCCACTCGCAGCCTaGAGCTCCGCTCCACGGTGTGCACTGCCCCATCTG +
Preference number: 6 (lower is better)
Translates to: SSAAAAGHPLAA*SSAPRCALPHL
Trigger: CAGATGGGGCAGTGCACACCGTGGAGCGGAGCTGCAGGCTGCGAGTGGATGCCCCGCGGCTGCTGCGGAAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS GCA 72 bp CACTCGCAGCCTGCAGCTCCGCTCCACGGTGTGCACTaGCCCATCTGTGCTCCGCCACTCGCCCAGGACTTC +
Preference number: 6 (lower is better)
Translates to: HSQPAAPLHGVH*PICAPPLAQDF
Trigger: GAAGTCCTGGGCGAGTGGCGGAGCACAGATGGGGCAGTGCACACCGTGGAGCGGAGCTGCAGGCTGCGAGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS CCA 72 bp GGGCACAAGCTGGCTGCGGACGTCCTCCTCCTGGACTaGGGCTGGTGTCCAGCGGGGAATGTGGGATGTTCC +
Preference number: 6 (lower is better)
Translates to: GHKLAADVLLLD*GWCPAGNVGCS
Trigger: GGAACATCCCACATTCCCCGCTGGACACCAGCCCCAGTCCAGGAGGAGGACGTCCGCAGCCAGCTTGTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS CCA 72 bp TCCATGTCCAGGGAGCTAGGGCACTGGGGCACAAGCTaGCTGCGGACGTCCTCCTCCTGGACTGGGGCTGGT +
Preference number: 6 (lower is better)
Translates to: SMSRELGHWGTS*LRTSSSWTGAG
Trigger: ACCAGCCCCAGTCCAGGAGGAGGACGTCCGCAGCCAGCTTGTGCCCCAGTGCCCTAGCTCCCTGGACATGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS CCA 72 bp TCACTGGGACCCTCCATGTCCAGGGAGCTAGGGCACTaGGGCACAAGCTGGCTGCGGACGTCCTCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: SLGPSMSRELGH*GTSWLRTSSSW
Trigger: CCAGGAGGAGGACGTCCGCAGCCAGCTTGTGCCCCAGTGCCCTAGCTCCCTGGACATGGAGGGTCCCAGTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS GCA 72 bp TGCAGCTCCGCTCCACGGTGTGCACTGCCCCATCTGTaGTCCGCCACTCGCCCAGGACTTCACTCCCCAGAA +
Preference number: 6 (lower is better)
Translates to: CSSAPRCALPHL*SATRPGLHSPE
Trigger: TTCTGGGGAGTGAAGTCCTGGGCGAGTGGCGGAGCACAGATGGGGCAGTGCACACCGTGGAGCGGAGCTGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS CCA 72 bp GGAGGGGGCCGCCAGGTCTGCAGAAGGAGATCCACCTaGTGCTGCTTCCGCCAGCTCAAGGACTGGCACAAC +
Preference number: 6 (lower is better)
Translates to: GGGRQVCRRRST*CCFRQLKDWHN
Trigger: GTTGTGCCAGTCCTTGAGCTGGCGGAAGCAGCACCAGGTGGATCTCCTTCTGCAGACCTGGCGGCCCCCTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS CCA 72 bp GTCCCCATCCGCTATGGCCATCTCAGAAGCAGGGCCTaGGGCATCACTGGGACCCTCCATGTCCAGGGAGCT +
Preference number: 6 (lower is better)
Translates to: VPIRYGHLRSRA*GITGTLHVQGA
Trigger: AGCTCCCTGGACATGGAGGGTCCCAGTGATGCCCCAGGCCCTGCTTCTGAGATGGCCATAGCGGATGGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS TCA 72 bp CATGGGAGCCCTGAATGCTCTGCCCTTCCCGGCAGATaGGGGGTGCCTCTACACGGCTGTAATCCACCCCCA +
Preference number: 6 (lower is better)
Translates to: HGSPECSALPGR*GVPLHGCNPPP
Trigger: TGGGGGTGGATTACAGCCGTGTAGAGGCACCCCTCATCTGCCGGGAAGGGCAGAGCATTCAGGGCTCCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS GCA 72 bp GCCCTGAATGCTCTGCCCTTCCCGGCAGATGAGGGGTaGCTCTACACGGCTGTAATCCACCCCCAGGATCCA +
Preference number: 6 (lower is better)
Translates to: ALNALPFPADEG*LYTAVIHPQDP
Trigger: TGGATCCTGGGGGTGGATTACAGCCGTGTAGAGGCACCCCTCATCTGCCGGGAAGGGCAGAGCATTCAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS CCA 72 bp CCGCCACTCGCCCAGGACTTCACTCCCCAGAAAGACTaGGATAAGCGGGCAGGTGGGGAAGCGCTTCTCGTA +
Preference number: 6 (lower is better)
Translates to: PPLAQDFTPQKD*DKRAGGEALLV
Trigger: TACGAGAAGCGCTTCCCCACCTGCCCGCTTATCCCAGTCTTTCTGGGGAGTGAAGTCCTGGGCGAGTGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS CAA 90 bp TGCTGCTTCCGCCAGCTCAAGGACTGGCACAACATGTCCCGGGCCTaGTCCAGGTGGAAGTCTCGTGCCCTCAGGAAGCGCAGGATATGC +
Preference number: 6 (lower is better)
Translates to: CCFRQLKDWHNMSRA*SRWKSRALRKRRIC
Trigger: GCATATCCTGCGCTTCCTGAGGGCACGAGACTTCCACCTGGACAAGGCCCGGGACATGTTGTGCCAGTCCTTGAGCTGGCGGAAGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS CCA 72 bp AGATCCACCTGGTGCTGCTTCCGCCAGCTCAAGGACTaGCACAACATGTCCCGGGCCTTGTCCAGGTGGAAG +
Preference number: 6 (lower is better)
Translates to: RSTWCCFRQLKD*HNMSRALSRWK
Trigger: CTTCCACCTGGACAAGGCCCGGGACATGTTGTGCCAGTCCTTGAGCTGGCGGAAGCAGCACCAGGTGGATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS CAA 72 bp AGGGCTTTCACTCCAGGTCGCCACAAATGCCGCATGTaGAGGCCCTCCAGGTCCAGCAAGCAGGTCCAGGAG +
Preference number: 6 (lower is better)
Translates to: RAFTPGRHKCRM*RPSRSSKQVQE
Trigger: CTCCTGGACCTGCTTGCTGGACCTGGAGGGCCTCAACATGCGGCATTTGTGGCGACCTGGAGTGAAAGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS CAA 90 bp ATCCGCAGTAGGGCTTTCACTCCAGGTCGCCACAAATGCCGCATGTaGAGGCCCTCCAGGTCCAGCAAGCAGGTCCAGGAGCTGATGGGA +
Preference number: 6 (lower is better)
Translates to: IRSRAFTPGRHKCRM*RPSRSSKQVQELMG
Trigger: TCCCATCAGCTCCTGGACCTGCTTGCTGGACCTGGAGGGCCTCAACATGCGGCATTTGTGGCGACCTGGAGTGAAAGCCCTACTGCGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS TCA 72 bp GCGGGCAGGTGGGGAAGCGCTTCTCGTAGGCCGCCATaGCCAGCTCGAATGGATACTTGTATACTCGGACAG +
Preference number: 6 (lower is better)
Translates to: AGRWGSASRRPP*PARMDTCILGQ
Trigger: CTGTCCGAGTATACAAGTATCCATTCGAGCTGGTCATGGCGGCCTACGAGAAGCGCTTCCCCACCTGCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS TCA 72 bp TCCATAGCACTGGGAAGACTCGGGGAGCACGCACGATaGGCAGCCTGCCCAGAGTCTCGGGGTAATTGTCCT +
Preference number: 6 (lower is better)
Translates to: SIALGRLGEHAR*AACPESRGNCP
Trigger: AGGACAATTACCCCGAGACTCTGGGCAGGCTGCTCATCGTGCGTGCTCCCCGAGTCTTCCCAGTGCTATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS GCA 72 bp CAACATGTCCCGGGCCTTGTCCAGGTGGAAGTCTCGTaGCCTCAGGAAGCGCAGGATATGCTCGTCTTTGGG +
Preference number: 6 (lower is better)
Translates to: QHVPGLVQVEVS*PQEAQDMLVFG
Trigger: CCCAAAGACGAGCATATCCTGCGCTTCCTGAGGGCACGAGACTTCCACCTGGACAAGGCCCGGGACATGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS GCA 72 bp ATCCGCAGTAGGGCTTTCACTCCAGGTCGCCACAAATaGCGCATGTTGAGGCCCTCCAGGTCCAGCAAGCAG +
Preference number: 6 (lower is better)
Translates to: IRSRAFTPGRHK*RMLRPSRSSKQ
Trigger: CTGCTTGCTGGACCTGGAGGGCCTCAACATGCGGCATTTGTGGCGACCTGGAGTGAAAGCCCTACTGCGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS CCA 72 bp AAGGACTGGCACAACATGTCCCGGGCCTTGTCCAGGTaGAAGTCTCGTGCCCTCAGGAAGCGCAGGATATGC +
Preference number: 6 (lower is better)
Translates to: KDWHNMSRALSR*KSRALRKRRIC
Trigger: GCATATCCTGCGCTTCCTGAGGGCACGAGACTTCCACCTGGACAAGGCCCGGGACATGTTGTGCCAGTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS CAA 72 bp CCACTGGCTCTCACTCCAGGCTCCTGGGGACTGAGCTaGGGTGCCTGCTTTGCATGGTACAGACTGAACACC +
Preference number: 6 (lower is better)
Translates to: PLALTPGSWGLS*GACFAWYRLNT
Trigger: GGTGTTCAGTCTGTACCATGCAAAGCAGGCACCCAAGCTCAGTCCCCAGGAGCCTGGAGTGAGAGCCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS GCA 72 bp TCCAGGCTCCTGGGGACTGAGCTTGGGTGCCTGCTTTaGATGGTACAGACTGAACACCACATCCCCTCTGAG +
Preference number: 6 (lower is better)
Translates to: SRLLGTELGCLL*MVQTEHHIPSE
Trigger: CTCAGAGGGGATGTGGTGTTCAGTCTGTACCATGCAAAGCAGGCACCCAAGCTCAGTCCCCAGGAGCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS GCA 72 bp CTCACTCCAGGCTCCTGGGGACTGAGCTTGGGTGCCTaGTTTGCATGGTACAGACTGAACACCACATCCCCT +
Preference number: 6 (lower is better)
Translates to: LTPGSWGLSLGA*FAWYRLNTTSP
Trigger: AGGGGATGTGGTGTTCAGTCTGTACCATGCAAAGCAGGCACCCAAGCTCAGTCCCCAGGAGCCTGGAGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS GCA 72 bp GGCTCTCACTCCAGGCTCCTGGGGACTGAGCTTGGGTaGCTGCTTTGCATGGTACAGACTGAACACCACATC +
Preference number: 6 (lower is better)
Translates to: GSHSRLLGTELG*LLCMVQTEHHI
Trigger: GATGTGGTGTTCAGTCTGTACCATGCAAAGCAGGCACCCAAGCTCAGTCCCCAGGAGCCTGGAGTGAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS CCA 72 bp CAATGTAGTCTGCATCCAGCTTGTCCCCATCCGCTATaGCCATCTCAGAAGCAGGGCCTGGGGCATCACTGG +
Preference number: 6 (lower is better)
Translates to: QCSLHPACPHPL*PSQKQGLGHHW
Trigger: CCAGTGATGCCCCAGGCCCTGCTTCTGAGATGGCCATAGCGGATGGGGACAAGCTGGATGCAGACTACATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS CCA 72 bp ATGCCAGCACTTCACAGTAGTACAGCAGCTTGCACTTaGGGCCAGGGCTGTGCAGAGCCGTCAGGACGTCAT +
Preference number: 6 (lower is better)
Translates to: MPALHSSTAACT*GQGCAEPSGRH
Trigger: ATGACGTCCTGACGGCTCTGCACAGCCCTGGCCCCAAGTGCAAGCTGCTGTACTACTGTGAAGTGCTGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS GCA 72 bp AGGTGGAAGTCTCGTGCCCTCAGGAAGCGCAGGATATaGTCGTCTTTGGGGATCTTGCCTTTGTGGGTCTCC +
Preference number: 6 (lower is better)
Translates to: RWKSRALRKRRI*SSLGILPLWVS
Trigger: GGAGACCCACAAAGGCAAGATCCCCAAAGACGAGCATATCCTGCGCTTCCTGAGGGCACGAGACTTCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS CCA 72 bp CCATGGCAACCTCATAGGGGGTCCCTCGGAGCACACTaGCAGAATGGTAGGTTTCACTCCACTGCTGTAGCT +
Preference number: 6 (lower is better)
Translates to: PWQPHRGSLGAH*QNGRFHSTAVA
Trigger: AGCTACAGCAGTGGAGTGAAACCTACCATTCTGCCAGTGTGCTCCGAGGGACCCCCTATGAGGTTGCCATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS GCA 72 bp GGGACTGAGATGGCCCAGACATCTCTCAATGTAGTCTaGATCCAGCTTGTCCCCATCCGCTATGGCCATCTC +
Preference number: 6 (lower is better)
Translates to: GTEMAQTSLNVV*IQLVPIRYGHL
Trigger: GAGATGGCCATAGCGGATGGGGACAAGCTGGATGCAGACTACATTGAGAGATGTCTGGGCCATCTCAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS CAA 72 bp CAGCAAGCAGGTCCAGGAGCTGATGGGACGCCCAAATaGTCTCGTGTTCCCTTCGCATCTCTTCTGTCCTTC +
Preference number: 6 (lower is better)
Translates to: QQAGPGADGTPK*SRVPFASLLSF
Trigger: GAAGGACAGAAGAGATGCGAAGGGAACACGAGACAATTTGGGCGTCCCATCAGCTCCTGGACCTGCTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS TCA 72 bp GCCGAAGCTGAACCAGGCAACTCTCCTGCATGGGACTaGGATGGCCCAGACATCTCTCAATGTAGTCTGCAT +
Preference number: 6 (lower is better)
Translates to: AEAEPGNSPAWD*DGPDISQCSLH
Trigger: ATGCAGACTACATTGAGAGATGTCTGGGCCATCTCAGTCCCATGCAGGAGAGTTGCCTGGTTCAGCTTCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS TCA 72 bp GCGTTCTCTCTCTCCAGTTCAGGACGTTTCTCTGAATaGAGACCACGTGCTCCACACCAGCAATCTTCCGCA +
Preference number: 6 (lower is better)
Translates to: AFSLSSSGRFSE*RPRAPHQQSSA
Trigger: TGCGGAAGATTGCTGGTGTGGAGCACGTGGTCTTCATTCAGAGAAACGTCCTGAACTGGAGAGAGAGAACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS TCA 72 bp AGCAGCGTTCTCTCTCTCCAGTTCAGGACGTTTCTCTaGATGAAGACCACGTGCTCCACACCAGCAATCTTC +
Preference number: 6 (lower is better)
Translates to: SSVLSLQFRTFL*MKTTCSTPAIF
Trigger: GAAGATTGCTGGTGTGGAGCACGTGGTCTTCATTCAGAGAAACGTCCTGAACTGGAGAGAGAGAACGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS TCA 72 bp ATCCCCTCTGAGGATATCAAAGTCCCAGGTGATGACTaGCTCCCCTTCTGGTATCTCCATGGCAACCTCATA +
Preference number: 6 (lower is better)
Translates to: IPSEDIKVPGDD*LPFWYLHGNLI
Trigger: TATGAGGTTGCCATGGAGATACCAGAAGGGGAGTCAGTCATCACCTGGGACTTTGATATCCTCAGAGGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS GCA 72 bp ATCACCTCCTTCCCCCTCTTGACATTGGCAGTGTACTaGTTCATGGCGATCTTCTCCAACGTGCTTTCAAAG +
Preference number: 6 (lower is better)
Translates to: ITSFPLLTLAVY*FMAIFSNVLSK
Trigger: CTTTGAAAGCACGTTGGAGAAGATCGCCATGAAGCAGTACACTGCCAATGTCAAGAGGGGGAAGGAGGTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2
CDS CCA 72 bp GAAGCGCTTCTCGTAGGCCGCCATGACCAGCTCGAATaGATACTTGTATACTCGGACAGGAGACTGATATTT +
Preference number: 6 (lower is better)
Translates to: EALLVGRHDQLE*ILVYSDRRLIF
Trigger: AAATATCAGTCTCCTGTCCGAGTATACAAGTATCCATTCGAGCTGGTCATGGCGGCCTACGAGAAGCGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165810.2
ENSMUST00000230616.2