Pregenerated sensors for SEC14L4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019368Ensembl transcript IDs: ENSMUST00000019512.8
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCTGGGGCCTCTTCCCCTTCACAGTCTGCCCAGCTGCCTCCAGCTaGCCCTTCCCATCCTTGCTGACCTCCAGTTGGAGAGAAGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: SWGLFPFTVCPAASS*PFPSLLTSSWREAS Trigger: GCTGGCTTCTCTCCAACTGGAGGTCAGCAAGGATGGGAAGGGCCAGCTGGAGGCAGCTGGGCAGACTGTGAAGGGGAAGAGGCCCCAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR CCA 90 bp | CCAGCCAGAGGCCCAGGAGAAGCAGTGCAGGACAGCCTAAGCTCCTaGGCCCCAGGTCATCGCTCCTCAGAGCCAATCCACAGAGGCACA | + |
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Preference number: 1 (lower is better) Translates to: PARGPGEAVQDSLSS*APGHRSSEPIHRGT Trigger: TGTGCCTCTGTGGATTGGCTCTGAGGAGCGATGACCTGGGGCCCAGGAGCTTAGGCTGTCCTGCACTGCTTCTCCTGGGCCTCTGGCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR GCA 90 bp | GCTCTGTTCAAGCTGGGGCCTCTTCCCCTTCACAGTCTGCCCAGCTaGCTCCAGCTGGCCCTTCCCATCCTTGCTGACCTCCAGTTGGAG | + |
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Preference number: 1 (lower is better) Translates to: ALFKLGPLPLHSLPS*LQLALPILADLQLE Trigger: CTCCAACTGGAGGTCAGCAAGGATGGGAAGGGCCAGCTGGAGGCAGCTGGGCAGACTGTGAAGGGGAAGAGGCCCCAGCTTGAACAGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR TCA 90 bp | TGGAGCAGTAGCGGGCTGTCTGTGTATGCCAGGAGGGCCAGCCTTTaGGACATCACACACAACAAGCTGTCACCTGCCAGCTCCTGGGTC | + |
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Preference number: 1 (lower is better) Translates to: WSSSGLSVYARRASL*DITHNKLSPASSWV Trigger: GACCCAGGAGCTGGCAGGTGACAGCTTGTTGTGTGTGATGTCTCAAAGGCTGGCCCTCCTGGCATACACAGACAGCCCGCTACTGCTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR CCA 90 bp | GAGAGAAGCCAGCCTGCAGCTGTGCTTCCTATGGGGAACCAGACGTaGATTTCATGTATCCAATCCCAGCTGGGATGCCAGGCATGGCTG | + |
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Preference number: 1 (lower is better) Translates to: ERSQPAAVLPMGNQT*ISCIQSQLGCQAWL Trigger: CAGCCATGCCTGGCATCCCAGCTGGGATTGGATACATGAAATCCACGTCTGGTTCCCCATAGGAAGCACAGCTGCAGGCTGGCTTCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR CCA 90 bp | GAAGGCAACGTCAGTAACCTAAGACAGTGTCTAAGCCACCCTGAATaGGACACGGGTCTTCTGTCCCAGCCAGAGGCCCAGGAGAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: EGNVSNLRQCLSHPE*DTGLLSQPEAQEKQ Trigger: CTGCTTCTCCTGGGCCTCTGGCTGGGACAGAAGACCCGTGTCCCATTCAGGGTGGCTTAGACACTGTCTTAGGTTACTGACGTTGCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR CCA 90 bp | AGACGGTGGGGCCTGAAGTCTCGCCTGCAAGGCGCCTTGACAAGGTaGTTTCTGCTAAGGCTTCTAGGCCGATGGCACTTTAGAGTAAGG | + |
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Preference number: 1 (lower is better) Translates to: RRWGLKSRLQGALTR*FLLRLLGRWHFRVR Trigger: CCTTACTCTAAAGTGCCATCGGCCTAGAAGCCTTAGCAGAAACCACCTTGTCAAGGCGCCTTGCAGGCGAGACTTCAGGCCCCACCGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR TCA 90 bp | GGACATGTGATGTCACCCTCAGCCCCATTCTCTGGGTATAGGGGATaGAAGTGCTGGTCTGTGTCTGAGTGGTCCGAAGGGAGGCTAAGA | + |
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Preference number: 1 (lower is better) Translates to: GHVMSPSAPFSGYRG*KCWSVSEWSEGRLR Trigger: TCTTAGCCTCCCTTCGGACCACTCAGACACAGACCAGCACTTTCATCCCCTATACCCAGAGAATGGGGCTGAGGGTGACATCACATGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR GCA 90 bp | CCATCCTTGCTGACCTCCAGTTGGAGAGAAGCCAGCCTGCAGCTGTaGTTCCTATGGGGAACCAGACGTGGATTTCATGTATCCAATCCC | + |
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Preference number: 1 (lower is better) Translates to: PSLLTSSWREASLQL*FLWGTRRGFHVSNP Trigger: GGGATTGGATACATGAAATCCACGTCTGGTTCCCCATAGGAAGCACAGCTGCAGGCTGGCTTCTCTCCAACTGGAGGTCAGCAAGGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR CCA 90 bp | CTGACCTCCAGTTGGAGAGAAGCCAGCCTGCAGCTGTGCTTCCTATaGGGAACCAGACGTGGATTTCATGTATCCAATCCCAGCTGGGAT | + |
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Preference number: 1 (lower is better) Translates to: LTSSWREASLQLCFL*GTRRGFHVSNPSWD Trigger: ATCCCAGCTGGGATTGGATACATGAAATCCACGTCTGGTTCCCCATAGGAAGCACAGCTGCAGGCTGGCTTCTCTCCAACTGGAGGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR TCA 90 bp | CGATGGCACTTTAGAGTAAGGACTCCCTTTCCAGAAACATCTATCTaGTCATTCATTCCAGGGACAGTTGGCCCAGCAGCACAGAAGGAC | + |
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Preference number: 1 (lower is better) Translates to: RWHFRVRTPFPETSI*SFIPGTVGPAAQKD Trigger: GTCCTTCTGTGCTGCTGGGCCAACTGTCCCTGGAATGAATGATCAGATAGATGTTTCTGGAAAGGGAGTCCTTACTCTAAAGTGCCATCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR CAA 90 bp | CCCAGCTGCCTCCAGCTGGCCCTTCCCATCCTTGCTGACCTCCAGTaGGAGAGAAGCCAGCCTGCAGCTGTGCTTCCTATGGGGAACCAG | + |
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Preference number: 2 (lower is better) Translates to: PSCLQLALPILADLQ*ERSQPAAVLPMGNQ Trigger: CTGGTTCCCCATAGGAAGCACAGCTGCAGGCTGGCTTCTCTCCAACTGGAGGTCAGCAAGGATGGGAAGGGCCAGCTGGAGGCAGCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR CAA 90 bp | CCCTTCACAGTCTGCCCAGCTGCCTCCAGCTGGCCCTTCCCATCCTaGCTGACCTCCAGTTGGAGAGAAGCCAGCCTGCAGCTGTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: PFTVCPAASSWPFPS*LTSSWREASLQLCF Trigger: GAAGCACAGCTGCAGGCTGGCTTCTCTCCAACTGGAGGTCAGCAAGGATGGGAAGGGCCAGCTGGAGGCAGCTGGGCAGACTGTGAAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR-3UTR TCA 90 bp | GCCAGAGGCCCAGGAGAAGCAGTGCAGGACAGCCTAAGCTCCTGGGCCCCAGGTCCTTCCCATCCTTGCTaGCCTCCAGTTGGAGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: ARGPGEAVQDSLSSWAPGPSHPC*PPVGEK Trigger: CTTCTCTCCAACTGGAGGTCAGCAAGGATGGGAAGG...ACCTGGGGCCCAGGAGCTTAGGCTGTCCTGCACTGCTTCTCCTGGGCCTCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR-3UTR GCA 90 bp | GACGAATCCCCGGAGTGGCTCACCCTGCCCTCTAGTACCTGTGCCTCCTGCTGTGGAGAGAAGCCAGCCTaGAGCTGTGCTTCCTATGGG | + |
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Preference number: 2 (lower is better) Translates to: DESPEWLTLPSSTCASCCGEKPA*SCASYG Trigger: CCCATAGGAAGCACAGCTGCAGGCTGGCTTCTCTCC...ACAGCAGGAGGCACAGGTACTAGAGGGCAGGGTGAGCCACTCCGGGGATTCGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR-3UTR TCA 90 bp | ACCTGTGCCTCCTGCTGTTTAGCTTTGGTCCTGAGTTCCACCCGGGCCAGGCATGTATCTTCAGAAGGATaGGACCATGGGGCGGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: TCASCCLALVLSSTRARHVSSEG*DHGAVS Trigger: GGACACCGCCCCATGGTCTCATCCTTCTGAAGATAC...ATGCCTGGCCCGGGTGGAACTCAGGACCAAAGCTAAACAGCAGGAGGCACAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGCAGCATCTGCTGTTAGGTTCAGTACACCTAGTGGAGCAGTAGCGGGCTGTCAGCATCACCCTGCCTaGGGTGCAAGGAGTAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: SAASAVRFSTPSGAVAGCQHHPA*GARSRG Trigger: ACCCCTACTCCTTGCACCCCAGGCAGGGTGATGCTG...ACAGCCCGCTACTGCTCCACTAGGTGTACTGAACCTAACAGCAGATGCTGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCCCTTCCCATCCTTGCTGACCTCCAGTTGGAGAGAAGCCAGCCTGCAGCTGGGTGTCCTTTCTCAGTaGACATGTGATGTCACCCTC | + |
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Preference number: 2 (lower is better) Translates to: WPFPSLLTSSWREASLQLGVLSQ*TCDVTL Trigger: GAGGGTGACATCACATGTCCACTGAGAAAGGACACC...CAGCTGCAGGCTGGCTTCTCTCCAACTGGAGGTCAGCAAGGATGGGAAGGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCCCTTCCCATCCTTGCTGACCTCCAGTTGGAGAGAAGCCAGCCTGCAGCTGGGCATGGCTGAATCATaGGTGTGTGGGTATCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: WPFPSLLTSSWREASLQLGMAES*VCGYLQ Trigger: CTGAAGATACCCACACACCCATGATTCAGCCATGCC...CAGCTGCAGGCTGGCTTCTCTCCAACTGGAGGTCAGCAAGGATGGGAAGGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR-3UTR CCA 90 bp | TCGCCTGCAAGGCGCCTTGACAAGGTGGTTTCTGCTAAGGCTTCTAGGCCGATGTTGCTGACCTCCAGTTaGAGAGAAGCCAGCCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: SPARRLDKVVSAKASRPMLLTSS*REASLQ Trigger: CTGCAGGCTGGCTTCTCTCCAACTGGAGGTCAGCAA...CATCGGCCTAGAAGCCTTAGCAGAAACCACCTTGTCAAGGCGCCTTGCAGGCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR CAA 90 bp | TCTGTGTCTGAGTGGTCCGAAGGGAGGCTAAGATGGAGACAAGGGTaGGAGATCTCTGTAGCCATGTTCAGCATCACCCTGCCTGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: SVSEWSEGRLRWRQG*EISVAMFSITLPGV Trigger: CACCCCAGGCAGGGTGATGCTGAACATGGCTACAGAGATCTCCAACCCTTGTCTCCATCTTAGCCTCCCTTCGGACCACTCAGACACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR-3UTR GCA 90 bp | GGTCCAGATACACTCACTAGGGGCTCCTCTGAAGAGCTCCCTCATCTTCCAGGTCAATCCCAGCTGGGATaGCAGGCATGGCTGAATCAT | + |
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Preference number: 2 (lower is better) Translates to: GPDTLTRGSSEELPHLPGQSQLG*QAWLNH Trigger: ATGATTCAGCCATGCCTGGCATCCCAGCTGGGATTG...ACCTGGAAGATGAGGGAGCTCTTCAGAGGAGCCCCTAGTGAGTGTATCTGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR-3UTR GCA 90 bp | GCAAGAATTTCTCCTGGCACTGCCTCTTGGCATTTAACCCCCAATGCAGACTCTTTCCCCTTCACAGTCTaGCCAGCTGCCTCCAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: ARISPGTASWHLTPNADSFPFTV*PAASSW Trigger: CCAGCTGGAGGCAGCTGGGCAGACTGTGAAGGGGAA...AGAGTCTGCATTGGGGGTTAAATGCCAAGAGGCAGTGCCAGGAGAAATTCTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR-3UTR CCA 90 bp | GAACCAGACGTGGATTTCATGTATCCAATCCCAGCTGGGATGCCAGGCATGGCTAGAAGGATGAGACCATaGGGCGGTGTCCTTTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: EPDVDFMYPIPAGMPGMARRMRP*GGVLSQ Trigger: CTGAGAAAGGACACCGCCCCATGGTCTCATCCTTCT...AGCCATGCCTGGCATCCCAGCTGGGATTGGATACATGAAATCCACGTCTGGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGCAGCATCTGCTGTTAGGTTCAGTACACCTAGTGGAGCAGTAGCGGGCTGTATGCTCTGTTCAAGCTaGGGCCTCTTCCCCTTCACA | + |
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Preference number: 2 (lower is better) Translates to: SAASAVRFSTPSGAVAGCMLCSS*GLFPFT Trigger: TGTGAAGGGGAAGAGGCCCCAGCTTGAACAGAGCAT...ACAGCCCGCTACTGCTCCACTAGGTGTACTGAACCTAACAGCAGATGCTGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAGAAAACCAAAGATAGGATCCGGAAGCAGAAGACGGTGGGGCCTGAAGTCTCATTCCAGGGACAGTTaGCCCAGCAGCACAGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: QRKPKIGSGSRRRWGLKSHSRDS*PSSTEG Trigger: TCCTTCTGTGCTGCTGGGCCAACTGTCCCTGGAATG...AGACTTCAGGCCCCACCGTCTTCTGCTTCCGGATCCTATCTTTGGTTTTCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR CAA 90 bp | AACAAGCTGTCACCTGCCAGCTCCTGGGTCACACGGGAAGTGATGTaGGCAGCTTCAACTCTCTCCTTAGACATGCAGACGGATGGAAAT | + |
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Preference number: 2 (lower is better) Translates to: NKLSPASSWVTREVM*AASTLSLDMQTDGN Trigger: ATTTCCATCCGTCTGCATGTCTAAGGAGAGAGTTGAAGCTGCCAACATCACTTCCCGTGTGACCCAGGAGCTGGCAGGTGACAGCTTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCAGCACAGAAGGACAAACAAAGAAGGCAACGTCAGTAACCTAAGACAGTGTCGGGCTGTCTGTGTATaGCAGGAGGGCCAGCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: QQHRRTNKEGNVSNLRQCRAVCV*QEGQPL Trigger: CAAAGGCTGGCCCTCCTGGCATACACAGACAGCCCG...ACACTGTCTTAGGTTACTGACGTTGCCTTCTTTGTTTGTCCTTCTGTGCTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR-3UTR CCA 90 bp | AACACCAAAGAAGGCAGACTAATGCAAGGCCAGCCTGGGCTACAGAGTGAGCGAGAAGGGAGGCTAAGATaGAGACAAGGGTTGGAGATC | + |
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Preference number: 2 (lower is better) Translates to: NTKEGRLMQGQPGLQSEREGRLR*RQGLEI Trigger: GATCTCCAACCCTTGTCTCCATCTTAGCCTCCCTTC...TCGCTCACTCTGTAGCCCAGGCTGGCCTTGCATTAGTCTGCCTTCTTTGGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR-3UTR CCA 90 bp | TCGCCTGCAAGGCGCCTTGACAAGGTGGTTTCTGCTAAGGCTTCTAGGCCGATGAGACATGCAGACGGATaGAAATCTAGAAGGTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: SPARRLDKVVSAKASRPMRHADG*KSRRFS Trigger: GGAGAACCTTCTAGATTTCCATCCGTCTGCATGTCT...CATCGGCCTAGAAGCCTTAGCAGAAACCACCTTGTCAAGGCGCCTTGCAGGCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR-3UTR GCA 90 bp | GGTCCAGATACACTCACTAGGGGCTCCTCTGAAGAGCTCCCTCATCTTCCAGGTATAGTGGTGCCCATATaGAACACCAAAGAAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: GPDTLTRGSSEELPHLPGIVVPI*NTKEGR Trigger: TCTGCCTTCTTTGGTGTTGCATATGGGCACCACTAT...ACCTGGAAGATGAGGGAGCTCTTCAGAGGAGCCCCTAGTGAGTGTATCTGGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAGAAAACCAAAGATAGGATCCGGAAGCAGAAGACGGTGGGGCCTGAAGTCTTACAGAGTGAGCGACTaGCTTAAGAGAGAGGGAATG | + |
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Preference number: 2 (lower is better) Translates to: QRKPKIGSGSRRRWGLKSYRVSD*LKREGM Trigger: CATTCCCTCTCTCTTAAGGCAGTCGCTCACTCTGTA...AGACTTCAGGCCCCACCGTCTTCTGCTTCCGGATCCTATCTTTGGTTTTCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR CAA 90 bp | GGCTACAGAGTGAGCGACTGCCTTAAGAGAGAGGGAATGTCAAAATaGAGTATCAGTAAGGTCCTAGCAGGTGTGTGTATGTGCAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: GYRVSDCLKREGMSK*SISKVLAGVCMCRR Trigger: CCTCCTGCACATACACACACCTGCTAGGACCTTACTGATACTCAATTTTGACATTCCCTCTCTCTTAAGGCAGTCGCTCACTCTGTAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCAGCACAGAAGGACAAACAAAGAAGGCAACGTCAGTAACCTAAGACAGTGTGGGGTTGAAAGGTCTTaGTGCTCTGTTCAAGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: QQHRRTNKEGNVSNLRQCGVERS*CSVQAG Trigger: CCCAGCTTGAACAGAGCATCAAGACCTTTCAACCCC...ACACTGTCTTAGGTTACTGACGTTGCCTTCTTTGTTTGTCCTTCTGTGCTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR-3UTR CCA 90 bp | GGCTCCTCTGAAGAGCTCCCTCATCTTCCAGGTTTACTGTTTTTCTCCATTAAATCCACAGAGGCACACTaGATCAAACTCAGCAGCATC | + |
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Preference number: 2 (lower is better) Translates to: GSSEELPHLPGLLFFSIKSTEAH*IKLSSI Trigger: GATGCTGCTGAGTTTGATCCAGTGTGCCTCTGTGGA...TTTAATGGAGAAAAACAGTAAACCTGGAAGATGAGGGAGCTCTTCAGAGGAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR GCA 72 bp | GAGTGGCTCACCCTGCCCTCTAGTACCTGTGCCTCCTaGTGTTTAGCTTTGGTCCTGAGTTCCACCCGGGCC | + |
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Preference number: 3 (lower is better) Translates to: EWLTLPSSTCAS*CLALVLSSTRA Trigger: GGCCCGGGTGGAACTCAGGACCAAAGCTAAACAGCAGGAGGCACAGGTACTAGAGGGCAGGGTGAGCCACTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR CCA 72 bp | AAGAAGCAAGTGAGAGGTCAGGACGAATCCCCGGAGTaGCTCACCCTGCCCTCTAGTACCTGTGCCTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: KKQVRGQDESPE*LTLPSSTCASC Trigger: GCAGGAGGCACAGGTACTAGAGGGCAGGGTGAGCCACTCCGGGGATTCGTCCTGACCTCTCACTTGCTTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR-3UTR CAA 90 bp | TCGCCTGCAAGGCGCCTTGACAAGGTGGTTTCTGCTAAGGCTTCTAGGCCGATGCTTGCTGACCTCCAGTaGGAGAGAAGCCAGCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: SPARRLDKVVSAKASRPMLADLQ*ERSQPA Trigger: TGCAGGCTGGCTTCTCTCCAACTGGAGGTCAGCAAG...CATCGGCCTAGAAGCCTTAGCAGAAACCACCTTGTCAAGGCGCCTTGCAGGCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR-3UTR CAA 90 bp | TCGCCTGCAAGGCGCCTTGACAAGGTGGTTTCTGCTAAGGCTTCTAGGCCGATGTGGCCCTTCCCATCCTaGCTGACCTCCAGTTGGAGA | + |
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Preference number: 3 (lower is better) Translates to: SPARRLDKVVSAKASRPMWPFPS*LTSSWR Trigger: TCTCCAACTGGAGGTCAGCAAGGATGGGAAGGGCCA...CATCGGCCTAGAAGCCTTAGCAGAAACCACCTTGTCAAGGCGCCTTGCAGGCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR TCA 72 bp | AGCGGGCTGTCTGTGTATGCCAGGAGGGCCAGCCTTTaGGACATCACACACAACAAGCTGTCACCTGCCAGC | + |
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Preference number: 3 (lower is better) Translates to: SGLSVYARRASL*DITHNKLSPAS Trigger: GCTGGCAGGTGACAGCTTGTTGTGTGTGATGTCTCAAAGGCTGGCCCTCCTGGCATACACAGACAGCCCGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR GCA 72 bp | AGCCGAGTGTGGCTTTTCTTCTGGGTTCCCCCGCCATaGCCTGCCTCTCCACGTCTGCTGTTTCTTCCAAAG | + |
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Preference number: 3 (lower is better) Translates to: SRVWLFFWVPPP*PASPRLLFLPK Trigger: CTTTGGAAGAAACAGCAGACGTGGAGAGGCAGGGCATGGCGGGGGAACCCAGAAGAAAAGCCACACTCGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR TCA 72 bp | GAGACCATGGGGCGGTGTCCTTTCTCAGTGGACATGTaGTGTCACCCTCAGCCCCATTCTCTGGGTATAGGG | + |
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Preference number: 3 (lower is better) Translates to: ETMGRCPFSVDM*CHPQPHSLGIG Trigger: CCCTATACCCAGAGAATGGGGCTGAGGGTGACATCACATGTCCACTGAGAAAGGACACCGCCCCATGGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR CCA 72 bp | GTCAGTAACCTAAGACAGTGTCTAAGCCACCCTGAATaGGACACGGGTCTTCTGTCCCAGCCAGAGGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: VSNLRQCLSHPE*DTGLLSQPEAQ Trigger: CTGGGCCTCTGGCTGGGACAGAAGACCCGTGTCCCATTCAGGGTGGCTTAGACACTGTCTTAGGTTACTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR CCA 72 bp | GGCCTGAAGTCTCGCCTGCAAGGCGCCTTGACAAGGTaGTTTCTGCTAAGGCTTCTAGGCCGATGGCACTTT | + |
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Preference number: 3 (lower is better) Translates to: GLKSRLQGALTR*FLLRLLGRWHF Trigger: AAAGTGCCATCGGCCTAGAAGCCTTAGCAGAAACCACCTTGTCAAGGCGCCTTGCAGGCGAGACTTCAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR-3UTR CAA 90 bp | GCCAGAGGCCCAGGAGAAGCAGTGCAGGACAGCCTAAGCTCCTGGGCCCCAGGTGAGGGAATGTCAAAATaGAGTATCAGTAAGGTCCTA | + |
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Preference number: 3 (lower is better) Translates to: ARGPGEAVQDSLSSWAPGEGMSK*SISKVL Trigger: TAGGACCTTACTGATACTCAATTTTGACATTCCCTC...ACCTGGGGCCCAGGAGCTTAGGCTGTCCTGCACTGCTTCTCCTGGGCCTCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR TCA 72 bp | ATGTCACCCTCAGCCCCATTCTCTGGGTATAGGGGATaGAAGTGCTGGTCTGTGTCTGAGTGGTCCGAAGGG | + |
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Preference number: 3 (lower is better) Translates to: MSPSAPFSGYRG*KCWSVSEWSEG Trigger: CCCTTCGGACCACTCAGACACAGACCAGCACTTTCATCCCCTATACCCAGAGAATGGGGCTGAGGGTGACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR GCA 72 bp | CAGCCTTTGAGACATCACACACAACAAGCTGTCACCTaGCAGCTCCTGGGTCACACGGGAAGTGATGTTGGC | + |
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Preference number: 3 (lower is better) Translates to: QPLRHHTQQAVT*QLLGHTGSDVG Trigger: GCCAACATCACTTCCCGTGTGACCCAGGAGCTGGCAGGTGACAGCTTGTTGTGTGTGATGTCTCAAAGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| 3UTR CCA 72 bp | AGAAGGATGAGACCATGGGGCGGTGTCCTTTCTCAGTaGACATGTGATGTCACCCTCAGCCCCATTCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RRMRPWGGVLSQ*TCDVTLSPILW Trigger: CCAGAGAATGGGGCTGAGGGTGACATCACATGTCCACTGAGAAAGGACACCGCCCCATGGTCTCATCCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| 3UTR CCA 72 bp | CAGCCTGCAGCTGTGCTTCCTATGGGGAACCAGACGTaGATTTCATGTATCCAATCCCAGCTGGGATGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: QPAAVLPMGNQT*ISCIQSQLGCQ Trigger: CTGGCATCCCAGCTGGGATTGGATACATGAAATCCACGTCTGGTTCCCCATAGGAAGCACAGCTGCAGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| 3UTR CCA 72 bp | AGAAAACCAAAGATAGGATCCGGAAGCAGAAGACGGTaGGGCCTGAAGTCTCGCCTGCAAGGCGCCTTGACA | + |
|
Preference number: 3 (lower is better) Translates to: RKPKIGSGSRRR*GLKSRLQGALT Trigger: TGTCAAGGCGCCTTGCAGGCGAGACTTCAGGCCCCACCGTCTTCTGCTTCCGGATCCTATCTTTGGTTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| 3UTR TCA 72 bp | ACGGATGGAAATCTAGAAGGTTCTCCAAGAAGCAAGTaGGAGGTCAGGACGAATCCCCGGAGTGGCTCACCC | + |
|
Preference number: 3 (lower is better) Translates to: TDGNLEGSPRSK*EVRTNPRSGSP Trigger: GGGTGAGCCACTCCGGGGATTCGTCCTGACCTCTCACTTGCTTCTTGGAGAACCTTCTAGATTTCCATCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| 3UTR GCA 72 bp | CTGACCTCCAGTTGGAGAGAAGCCAGCCTGCAGCTGTaGTTCCTATGGGGAACCAGACGTGGATTTCATGTA | + |
|
Preference number: 3 (lower is better) Translates to: LTSSWREASLQL*FLWGTRRGFHV Trigger: TACATGAAATCCACGTCTGGTTCCCCATAGGAAGCACAGCTGCAGGCTGGCTTCTCTCCAACTGGAGGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTAGTACCTGTGCCTCCTGCTGTTTAGCTTTGGTCCTGAGTTCCACCCGGGCCGGGTGTGTGAAGGAGTaGGATGGAGTAAAATCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SSTCASCCLALVLSSTRAGCVKE*DGVKSE Trigger: CTCTGATTTTACTCCATCCAACTCCTTCACACACCC...GGCCCGGGTGGAACTCAGGACCAAAGCTAAACAGCAGGAGGCACAGGTACTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTCCAGATACACTCACTAGGGGCTCCTCTGAAGAGCTCCCTCATCTTCCAGGTAGATGGAGACAAGGGTaGGAGATCTCTGTAGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: GPDTLTRGSSEELPHLPGRWRQG*EISVAM Trigger: CATGGCTACAGAGATCTCCAACCCTTGTCTCCATCT...ACCTGGAAGATGAGGGAGCTCTTCAGAGGAGCCCCTAGTGAGTGTATCTGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| 3UTR CCA 72 bp | TGGTCTGTGTCTGAGTGGTCCGAAGGGAGGCTAAGATaGAGACAAGGGTTGGAGATCTCTGTAGCCATGTTC | + |
|
Preference number: 3 (lower is better) Translates to: WSVSEWSEGRLR*RQGLEISVAMF Trigger: GAACATGGCTACAGAGATCTCCAACCCTTGTCTCCATCTTAGCCTCCCTTCGGACCACTCAGACACAGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| 3UTR CCA 72 bp | CATGGGTGTGTGGGTATCTTCAGAAGGATGAGACCATaGGGCGGTGTCCTTTCTCAGTGGACATGTGATGTC | + |
|
Preference number: 3 (lower is better) Translates to: HGCVGIFRRMRP*GGVLSQWTCDV Trigger: GACATCACATGTCCACTGAGAAAGGACACCGCCCCATGGTCTCATCCTTCTGAAGATACCCACACACCCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| 3UTR CCA 72 bp | AGTTGGAGAGAAGCCAGCCTGCAGCTGTGCTTCCTATaGGGAACCAGACGTGGATTTCATGTATCCAATCCC | + |
|
Preference number: 3 (lower is better) Translates to: SWREASLQLCFL*GTRRGFHVSNP Trigger: GGGATTGGATACATGAAATCCACGTCTGGTTCCCCATAGGAAGCACAGCTGCAGGCTGGCTTCTCTCCAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| 3UTR CCA 72 bp | ATTTCATGTATCCAATCCCAGCTGGGATGCCAGGCATaGCTGAATCATGGGTGTGTGGGTATCTTCAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: ISCIQSQLGCQA*LNHGCVGIFRR Trigger: CCTTCTGAAGATACCCACACACCCATGATTCAGCCATGCCTGGCATCCCAGCTGGGATTGGATACATGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| 3UTR CCA 72 bp | TTGACAAGGTGGTTTCTGCTAAGGCTTCTAGGCCGATaGCACTTTAGAGTAAGGACTCCCTTTCCAGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: LTRWFLLRLLGR*HFRVRTPFPET Trigger: TGTTTCTGGAAAGGGAGTCCTTACTCTAAAGTGCCATCGGCCTAGAAGCCTTAGCAGAAACCACCTTGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| 3UTR TCA 72 bp | TTTAGAGTAAGGACTCCCTTTCCAGAAACATCTATCTaGTCATTCATTCCAGGGACAGTTGGCCCAGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: FRVRTPFPETSI*SFIPGTVGPAA Trigger: TGCTGCTGGGCCAACTGTCCCTGGAATGAATGATCAGATAGATGTTTCTGGAAAGGGAGTCCTTACTCTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| 3UTR CCA 72 bp | AGAAACATCTATCTGATCATTCATTCCAGGGACAGTTaGCCCAGCAGCACAGAAGGACAAACAAAGAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: RNIYLIIHSRDS*PSSTEGQTKKA Trigger: TGCCTTCTTTGTTTGTCCTTCTGTGCTGCTGGGCCAACTGTCCCTGGAATGAATGATCAGATAGATGTTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| CDS-3UTR CCA 90 bp | GCCAGAGGCCCAGGAGAAGCAGTGCAGGACAGCCTAAGCTCCTGGGCCCCAGGTGTGGGCAGCAGATCCTaGAGGGTCTCCCGGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: ARGPGEAVQDSLSSWAPGVGSRS*RVSRNL Trigger: CAGGTTCCGGGAGACCCTCCAGGATCTGCTGCCCAC...ACCTGGGGCCCAGGAGCTTAGGCTGTCCTGCACTGCTTCTCCTGGGCCTCTGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| CDS-3UTR CCA 90 bp | GACGAATCCCCGGAGTGGCTCACCCTGCCCTCTAGTACCTGTGCCTCCTGCTGTCGGCCTTGGGCAGGGTaGGCAGCAGATCCTGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DESPEWLTLPSSTCASCCRPWAG*AADPGG Trigger: CCCTCCAGGATCTGCTGCCCACCCTGCCCAAGGCCG...ACAGCAGGAGGCACAGGTACTAGAGGGCAGGGTGAGCCACTCCGGGGATTCGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| CDS-3UTR CCA 90 bp | GACGAATCCCCGGAGTGGCTCACCCTGCCCTCTAGTACCTGTGCCTCCTGCTGTGGGTCTCCCGGAACCTaGCCAGAGCCTCCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DESPEWLTLPSSTCASCCGSPGT*PEPPAA Trigger: AGCAGCAGGAGGCTCTGGCCAGGTTCCGGGAGACCC...ACAGCAGGAGGCACAGGTACTAGAGGGCAGGGTGAGCCACTCCGGGGATTCGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| CDS-3UTR TCA 90 bp | GCCAGAGGCCCAGGAGAAGCAGTGCAGGACAGCCTAAGCTCCTGGGCCCCAGGTTTCCTGCCCAACTTTTaGCTCTGCAGCTCACACTCA | + |
|
Preference number: 4 (lower is better) Translates to: ARGPGEAVQDSLSSWAPGFLPNF*LCSSHS Trigger: TGAGTGTGAGCTGCAGAGTCAAAAGTTGGGCAGGAA...ACCTGGGGCCCAGGAGCTTAGGCTGTCCTGCACTGCTTCTCCTGGGCCTCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| CDS-3UTR GCA 90 bp | AACACCAAAGAAGGCAGACTAATGCAAGGCCAGCCTGGGCTACAGAGTGAGCGACTGGCCAGAGCCTCCTaGTGCTGCGGGCTCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NTKEGRLMQGQPGLQSERLARAS*CCGLRS Trigger: GGACCTGAGCCCGCAGCAGCAGGAGGCTCTGGCCAG...TCGCTCACTCTGTAGCCCAGGCTGGCCTTGCATTAGTCTGCCTTCTTTGGTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| 3UTR CAA 72 bp | AGACGGTGGGGCCTGAAGTCTCGCCTGCAAGGCGCCTaGACAAGGTGGTTTCTGCTAAGGCTTCTAGGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: RRWGLKSRLQGA*TRWFLLRLLGR Trigger: TCGGCCTAGAAGCCTTAGCAGAAACCACCTTGTCAAGGCGCCTTGCAGGCGAGACTTCAGGCCCCACCGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| CDS-3UTR GCA 90 bp | GCAAGAATTTCTCCTGGCACTGCCTCTTGGCATTTAACCCCCAATGCAGACTCTGCCAGAGCCTCCTGCTaGTGCGGGCTCAGGTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: ARISPGTASWHLTPNADSARASC*CGLRSP Trigger: CGGGGACCTGAGCCCGCAGCAGCAGGAGGCTCTGGC...AGAGTCTGCATTGGGGGTTAAATGCCAAGAGGCAGTGCCAGGAGAAATTCTTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| CDS-3UTR CCA 90 bp | TCTAGTACCTGTGCCTCCTGCTGTTTAGCTTTGGTCCTGAGTTCCACCCGGGCCATCTCATTCTCCACCTaGTGGGAGGAGCCTCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSTCASCCLALVLSSTRAISFST*WEEPRP Trigger: GGGCCGAGGCTCCTCCCACCAGGTGGAGAATGAGAT...GGCCCGGGTGGAACTCAGGACCAAAGCTAAACAGCAGGAGGCACAGGTACTAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| CDS-3UTR GCA 90 bp | CCTAGTGGAGCAGTAGCGGGCTGTCTGTGTATGCCAGGAGGGCCAGCCTTTGAGGTGGCCTCTCCTGATTaGTCAGGTAATAGCGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: PSGAVAGCLCMPGGPAFEVASPD*SGNSAS Trigger: CGAAGCGCTATTACCTGAGCAATCAGGAGAGGCCAC...CTCAAAGGCTGGCCCTCCTGGCATACACAGACAGCCCGCTACTGCTCCACTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| CDS-3UTR CCA 90 bp | ACCTGTGCCTCCTGCTGTTTAGCTTTGGTCCTGAGTTCCACCCGGGCCAGGCATCTCACAGGCCTTGTCTaGAAGAAGCACCTCCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TCASCCLALVLSSTRARHLTGLV*KKHLRS Trigger: ACTGCGGAGGTGCTTCTTCCAGACAAGGCCTGTGAG...ATGCCTGGCCCGGGTGGAACTCAGGACCAAAGCTAAACAGCAGGAGGCACAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| CDS-3UTR TCA 90 bp | TCGCCTGCAAGGCGCCTTGACAAGGTGGTTTCTGCTAAGGCTTCTAGGCCGATGAAGCAAACTGCCACCTaGGCACACAGCCTGGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: SPARRLDKVVSAKASRPMKQTAT*AHSLGT Trigger: TGTTCCCAGGCTGTGTGCTCAGGTGGCAGTTTGCTT...CATCGGCCTAGAAGCCTTAGCAGAAACCACCTTGTCAAGGCGCCTTGCAGGCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| CDS-3UTR GCA 90 bp | GCCAGAGGCCCAGGAGAAGCAGTGCAGGACAGCCTAAGCTCCTGGGCCCCAGGTTTCCGGATCATGTCCTaGTTAGAGGCTGACATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ARGPGEAVQDSLSSWAPGFRIMS*LEADIK Trigger: TTTTATGTCAGCCTCTAAGCAGGACATGATCCGGAA...ACCTGGGGCCCAGGAGCTTAGGCTGTCCTGCACTGCTTCTCCTGGGCCTCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| CDS-3UTR GCA 90 bp | TCTAGTACCTGTGCCTCCTGCTGTTTAGCTTTGGTCCTGAGTTCCACCCGGGCCGCTGGCTTCCATAAGTaGCTCAGACTCAGCCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSTCASCCLALVLSSTRAAGFHK*LRLSPS Trigger: GGAAGGGCTGAGTCTGAGGCACTTATGGAAGCCAGC...GGCCCGGGTGGAACTCAGGACCAAAGCTAAACAGCAGGAGGCACAGGTACTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| CDS-3UTR TCA 90 bp | TGGCCCTTCCCATCCTTGCTGACCTCCAGTTGGAGAGAAGCCAGCCTGCAGCTGGCATCTCACAGACTTTaGTACGCTTCCGGATCATGT | + |
|
Preference number: 4 (lower is better) Translates to: WPFPSLLTSSWREASLQLASHRL*YASGSC Trigger: ACATGATCCGGAAGCGTATCAAAGTCTGTGAGATGC...CAGCTGCAGGCTGGCTTCTCTCCAACTGGAGGTCAGCAAGGATGGGAAGGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGATACACTCACTAGGGGCTCCTCTGAAGAGCTCCCTCATCTTCCAGGTTTGGATCACCTCTGGTaGCTGCCACGTCAGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: GPDTLTRGSSEELPHLPGLDHLW*LPRQDL Trigger: CAGATCCTGACGTGGCAGGCACCAGAGGTGATCCAA...ACCTGGAAGATGAGGGAGCTCTTCAGAGGAGCCCCTAGTGAGTGTATCTGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| 3UTR CAA 72 bp | TCACCTGCCAGCTCCTGGGTCACACGGGAAGTGATGTaGGCAGCTTCAACTCTCTCCTTAGACATGCAGACG | + |
|
Preference number: 4 (lower is better) Translates to: SPASSWVTREVM*AASTLSLDMQT Trigger: CGTCTGCATGTCTAAGGAGAGAGTTGAAGCTGCCAACATCACTTCCCGTGTGACCCAGGAGCTGGCAGGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| CDS-3UTR GCA 90 bp | CCAATCCCAGCTGGGATGCCAGGCATGGCTGAATCATGGGTGTGTGGGTATCTTCCATCTGAAGCAAACTaGCACCTGAGCACACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PIPAGMPGMAESWVCGYLPSEAN*HLSTQP Trigger: AGGCTGTGTGCTCAGGTGGCAGTTTGCTTCAGATGG...AAGATACCCACACACCCATGATTCAGCCATGCCTGGCATCCCAGCTGGGATTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| 3UTR CAA 72 bp | GAGTGGTCCGAAGGGAGGCTAAGATGGAGACAAGGGTaGGAGATCTCTGTAGCCATGTTCAGCATCACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EWSEGRLRWRQG*EISVAMFSITL Trigger: CAGGGTGATGCTGAACATGGCTACAGAGATCTCCAACCCTTGTCTCCATCTTAGCCTCCCTTCGGACCACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| CDS-3UTR TCA 90 bp | GAACCAGACGTGGATTTCATGTATCCAATCCCAGCTGGGATGCCAGGCATGGCTGGTCCATTGTCCCAATaGTGTCAAACCACACAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: EPDVDFMYPIPAGMPGMAGPLSQ*CQTTQG Trigger: GCCCTGTGTGGTTTGACATCATTGGGACAATGGACC...AGCCATGCCTGGCATCCCAGCTGGGATTGGATACATGAAATCCACGTCTGGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| CDS-3UTR TCA 90 bp | TCGCCTGCAAGGCGCCTTGACAAGGTGGTTTCTGCTAAGGCTTCTAGGCCGATGCAGGGCTCACAAACTTaGCAAGCTCTTGTTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SPARRLDKVVSAKASRPMQGSQT*QALVSS Trigger: ACTGGAAACAAGAGCTTGTCAAGTTTGTGAGCCCTG...CATCGGCCTAGAAGCCTTAGCAGAAACCACCTTGTCAAGGCGCCTTGCAGGCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGAATTTCTCCTGGCACTGCCTCTTGGCATTTAACCCCCAATGCAGACTCTAGTAGTCATCGGCCTTaGGCAGGGTGGGCAGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ARISPGTASWHLTPNADSSSHRP*AGWAAD Trigger: ATCTGCTGCCCACCCTGCCCAAGGCCGATGACTACT...AGAGTCTGCATTGGGGGTTAAATGCCAAGAGGCAGTGCCAGGAGAAATTCTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| CDS-3UTR CCA 90 bp | GGTCCAGATACACTCACTAGGGGCTCCTCTGAAGAGCTCCCTCATCTTCCAGGTAATTCCACAGGCAGCTaGTCAGGGCTCACAAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GPDTLTRGSSEELPHLPGNSTGS*SGLTNL Trigger: CAAGTTTGTGAGCCCTGACCAGCTGCCTGTGGAATT...ACCTGGAAGATGAGGGAGCTCTTCAGAGGAGCCCCTAGTGAGTGTATCTGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| 3UTR CAA 72 bp | CAGAAACATCTATCTGATCATTCATTCCAGGGACAGTaGGCCCAGCAGCACAGAAGGACAAACAAAGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QKHLSDHSFQGQ*AQQHRRTNKEG Trigger: GCCTTCTTTGTTTGTCCTTCTGTGCTGCTGGGCCAACTGTCCCTGGAATGAATGATCAGATAGATGTTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| 3UTR CAA 72 bp | GTGAGCGACTGCCTTAAGAGAGAGGGAATGTCAAAATaGAGTATCAGTAAGGTCCTAGCAGGTGTGTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: VSDCLKREGMSK*SISKVLAGVCM Trigger: CATACACACACCTGCTAGGACCTTACTGATACTCAATTTTGACATTCCCTCTCTCTTAAGGCAGTCGCTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| CDS-3UTR CAA 90 bp | CCTAGTGGAGCAGTAGCGGGCTGTCTGTGTATGCCAGGAGGGCCAGCCTTTGAGCCAGCCTTGAGGCAGTaGAGGCTCCCATCCTCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PSGAVAGCLCMPGGPAFEPALRQ*RLPSSG Trigger: GCCCGAGGATGGGAGCCTCAACTGCCTCAAGGCTGG...CTCAAAGGCTGGCCCTCCTGGCATACACAGACAGCCCGCTACTGCTCCACTAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| CDS-3UTR CAA 90 bp | GCCAGAGGCCCAGGAGAAGCAGTGCAGGACAGCCTAAGCTCCTGGGCCCCAGGTCCGTCTCAGGATAATTaGCTTCCAAGATGGCAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: ARGPGEAVQDSLSSWAPGPSQDN*LPRWQK Trigger: TTTTTGCCATCTTGGAAGCAAATTATCCTGAGACGG...ACCTGGGGCCCAGGAGCTTAGGCTGTCCTGCACTGCTTCTCCTGGGCCTCTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| CDS CCA 90 bp | GTCATAGCCAGACAGACCACCAGAGTCATAGAGTTGGATCACCTCTaGTGCCTGCCACGTCAGGATCTGGTCCAGGTTCTGCTGATTCCG | + |
|
Preference number: 5 (lower is better) Translates to: VIARQTTRVIELDHL*CLPRQDLVQVLLIP Trigger: CGGAATCAGCAGAACCTGGACCAGATCCTGACGTGGCAGGCACCAGAGGTGATCCAACTCTATGACTCTGGTGGTCTGTCTGGCTATGAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| CDS-3UTR CAA 90 bp | TGGCCCTTCCCATCCTTGCTGACCTCCAGTTGGAGAGAAGCCAGCCTGCAGCTGAGCATCTCACAGACTTaGATACGCTTCCGGATCATG | + |
|
Preference number: 5 (lower is better) Translates to: WPFPSLLTSSWREASLQLSISQT*IRFRIM Trigger: CATGATCCGGAAGCGTATCAAAGTCTGTGAGATGCT...CAGCTGCAGGCTGGCTTCTCTCCAACTGGAGGTCAGCAAGGATGGGAAGGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| CDS-3UTR CAA 90 bp | ACGTGGATTTCATGTATCCAATCCCAGCTGGGATGCCAGGCATGGCTGAATCATCTTCCTGCCCAACTTTaGACTCTGCAGCTCACACTC | + |
|
Preference number: 5 (lower is better) Translates to: TWISCIQSQLGCQAWLNHLPAQL*TLQLTL Trigger: GAGTGTGAGCTGCAGAGTCAAAAGTTGGGCAGGAAG...ATGATTCAGCCATGCCTGGCATCCCAGCTGGGATTGGATACATGAAATCCACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| CDS-3UTR CAA 90 bp | TGGTCCGAAGGGAGGCTAAGATGGAGACAAGGGTTGGAGATCTCTGTAGCCATGTCTCCCATGAATGATTaGACCAGGTTGAAGGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: WSEGRLRWRQGLEISVAMSPMND*TRLKAT Trigger: AGTGGCCTTCAACCTGGTCAAATCATTCATGGGAGA...CATGGCTACAGAGATCTCCAACCCTTGTCTCCATCTTAGCCTCCCTTCGGACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| CDS-3UTR CAA 90 bp | AACACCAAAGAAGGCAGACTAATGCAAGGCCAGCCTGGGCTACAGAGTGAGCGAAAACTTGACAAGCTCTaGTTTCCAGTTACCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: NTKEGRLMQGQPGLQSERKLDKL*FPVTSQ Trigger: CTGGGAGGTAACTGGAAACAAGAGCTTGTCAAGTTT...TCGCTCACTCTGTAGCCCAGGCTGGCCTTGCATTAGTCTGCCTTCTTTGGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| CDS TCA 90 bp | CTCACAGACTTTGATACGCTTCCGGATCATGTCCTGCTTAGAGGCTaGCATAAAAAGGCCTTTGGGGTCCATTGTCCCAATGATGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LTDFDTLPDHVLLRG*HKKAFGVHCPNDVK Trigger: TTTGACATCATTGGGACAATGGACCCCAAAGGCCTTTTTATGTCAGCCTCTAAGCAGGACATGATCCGGAAGCGTATCAAAGTCTGTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| CDS GCA 72 bp | CAGACCACCAGAGTCATAGAGTTGGATCACCTCTGGTaGCTGCCACGTCAGGATCTGGTCCAGGTTCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: QTTRVIELDHLW*LPRQDLVQVLL Trigger: CAGCAGAACCTGGACCAGATCCTGACGTGGCAGGCACCAGAGGTGATCCAACTCTATGACTCTGGTGGTCTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| CDS CAA 90 bp | GCAGCCTTCGTAGTCATAGCCAGACAGACCACCAGAGTCATAGAGTaGGATCACCTCTGGTGCCTGCCACGTCAGGATCTGGTCCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: AAFVVIARQTTRVIE*DHLWCLPRQDLVQV Trigger: AACCTGGACCAGATCCTGACGTGGCAGGCACCAGAGGTGATCCAACTCTATGACTCTGGTGGTCTGTCTGGCTATGACTACGAAGGCTGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
||
| CDS CAA 72 bp | TGCAGCTCACACTCATGGAGAAGCATCTCACAGACTTaGATACGCTTCCGGATCATGTCCTGCTTAGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: CSSHSWRSISQT*IRFRIMSCLEA Trigger: AGCCTCTAAGCAGGACATGATCCGGAAGCGTATCAAAGTCTGTGAGATGCTTCTCCATGAGTGTGAGCTGCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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| CDS CAA 72 bp | AGGCAGCTGGTCAGGGCTCACAAACTTGACAAGCTCTaGTTTCCAGTTACCTCCCAGAATCACTATCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: RQLVRAHKLDKL*FPVTSQNHYLL Trigger: AAGAAGATAGTGATTCTGGGAGGTAACTGGAAACAAGAGCTTGTCAAGTTTGTGAGCCCTGACCAGCTGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019512.8 |
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