Pregenerated sensors for SEC14L3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054986Ensembl transcript IDs: ENSMUST00000068322.7
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGAACTAAAGGCATaGACCACCACGCCCGGCTTCTCTGTGCGGCTTCTTGAAGAACCT | + |
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Preference number: 1 (lower is better) Translates to: RNLPASASRVLELKA*TTTPGFSVRLLEEP Trigger: AGGTTCTTCAAGAAGCCGCACAGAGAAGCCGGGCGTGGTGGTGCATGCCTTTAGTTCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| 3UTR CCA 90 bp | CGGCTTCTTGAAGAACCTCCTCACACGTTGTGGGTCTCCACTAGCTaGGCTGCCCAATTTGGGGGATTATCTCTTCTATTTATAAAAAGG | + |
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Preference number: 1 (lower is better) Translates to: RLLEEPPHTLWVSTS*AAQFGGLSLLFIKR Trigger: CCTTTTTATAAATAGAAGAGATAATCCCCCAAATTGGGCAGCCCAGCTAGTGGAGACCCACAACGTGTGAGGAGGTTCTTCAAGAAGCCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| 3UTR GCA 90 bp | AAGGGCTTAGAGGGATGGGGAGTATCCAATAGCTCTACTCAAAGATaGAGGGCAATGAAAACACTCCATATCTTCTTGTCAGAGCAGGAT | + |
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Preference number: 1 (lower is better) Translates to: KGLEGWGVSNSSTQR*RAMKTLHIFLSEQD Trigger: ATCCTGCTCTGACAAGAAGATATGGAGTGTTTTCATTGCCCTGCATCTTTGAGTAGAGCTATTGGATACTCCCCATCCCTCTAAGCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| 3UTR CCA 90 bp | ATTTGGGGGATTATCTCTTCTATTTATAAAAAGGGCTTAGAGGGATaGGGAGTATCCAATAGCTCTACTCAAAGATGCAGGGCAATGAAA | + |
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Preference number: 1 (lower is better) Translates to: IWGIISSIYKKGLEG*GVSNSSTQRCRAMK Trigger: TTTCATTGCCCTGCATCTTTGAGTAGAGCTATTGGATACTCCCCATCCCTCTAAGCCCTTTTTATAAATAGAAGAGATAATCCCCCAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| 3UTR-3UTR CCA 90 bp | TTTTTGTGCTCTGCCTGCATGTACACCTGCAACCCGGAGGCATCAGATCCCATCAAACCACTGTTAGGTTaGATGGCACGAGTCTTCGGC | + |
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Preference number: 2 (lower is better) Translates to: FLCSACMYTCNPEASDPIKPLLG*MARVFG Trigger: GCCGAAGACTCGTGCCATCCAACCTAACAGTGGTTT...GATGGGATCTGATGCCTCCGGGTTGCAGGTGTACATGCAGGCAGAGCACAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| 3UTR CAA 90 bp | AACGTCTTAGGAGAGATGAGGCCAAGTAGAGTCATTTTCCTATTCTaGGGCCCCAAGGACACCCATCTCCTGTCTTCCCTTCGTGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: NVLGEMRPSRVIFLF*GPKDTHLLSSLRGS Trigger: AGAACCACGAAGGGAAGACAGGAGATGGGTGTCCTTGGGGCCCAAGAATAGGAAAATGACTCTACTTGGCCTCATCTCTCCTAAGACGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| 3UTR-3UTR GCA 90 bp | GGATGGGGAGTATCCAATAGCTCTACTCAAAGATGCAGGGCAATGAAAACACTCCGGGCAACCTCTCTCTaGTCACTGCTGTCACAGAGT | + |
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Preference number: 2 (lower is better) Translates to: GWGVSNSSTQRCRAMKTLRATSL*SLLSQS Trigger: ACTCTGTGACAGCAGTGAGCAGAGAGAGGTTGCCCG...GAGTGTTTTCATTGCCCTGCATCTTTGAGTAGAGCTATTGGATACTCCCCATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| 3UTR-3UTR TCA 90 bp | TGCAACCCGGAGGCATCAGATCCCATCACAGATGGTTGTGAGCCACCATGTGGATTAAAATATGAGCCGTaGGTTCAAAAGGAAGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: CNPEASDPITDGCEPPCGLKYEP*VQKEGS Trigger: ACTTCCTTCCTTTTGAACTCACGGCTCATATTTTAA...TCCACATGGTGGCTCACAACCATCTGTGATGGGATCTGATGCCTCCGGGTTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| 3UTR-3UTR CCA 90 bp | TTTGTGTCTGAGACTCCCAAAAGGAAACCACTGTTAGGTTGGATGGCACGAGTCTCATTTTCCTATTCTTaGGCCCCAAGGACACCCATC | + |
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Preference number: 2 (lower is better) Translates to: FVSETPKRKPLLGWMARVSFSYS*APRTPI Trigger: GATGGGTGTCCTTGGGGCCCAAGAATAGGAAAATGA...GACTCGTGCCATCCAACCTAACAGTGGTTTCCTTTTGGGAGTCTCAGACACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| 3UTR-3UTR GCA 90 bp | GGATGGGGAGTATCCAATAGCTCTACTCAAAGATGCAGGGCAATGAAAACACTCAGGGAGGGACTCAAGTaGAAACGTCTTAGGAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: GWGVSNSSTQRCRAMKTLREGLK*KRLRRD Trigger: ATCTCTCCTAAGACGTTTGCACTTGAGTCCCTCCCT...GAGTGTTTTCATTGCCCTGCATCTTTGAGTAGAGCTATTGGATACTCCCCATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| 3UTR-3UTR TCA 90 bp | CTTGTCAGAGCAGGATCATATGAGGGCCCATTATGGAGCAATTTAGAGCAATGCAAGCTCTTGGAACAGTaGCAATCCTCAGCAAACAGT | + |
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Preference number: 2 (lower is better) Translates to: LVRAGSYEGPLWSNLEQCKLLEQ*QSSANS Trigger: ACTGTTTGCTGAGGATTGTCACTGTTCCAAGAGCTT...GCATTGCTCTAAATTGCTCCATAATGGGCCCTCATATGATCCTGCTCTGACAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| 3UTR-3UTR GCA 90 bp | GGGATTATCTCTTCTATTTATAAAAAGGGCTTAGAGGGATGGGGAGTATCCAATGGTGCTGAAATCTGCTaGCTGGTCTCTCTTATAATT | + |
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Preference number: 2 (lower is better) Translates to: GIISSIYKKGLEGWGVSNGAEIC*LVSLII Trigger: AATTATAAGAGAGACCAGGCAGCAGATTTCAGCACC...ATTGGATACTCCCCATCCCTCTAAGCCCTTTTTATAAATAGAAGAGATAATCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| 3UTR GCA 72 bp | CCTGCCTCTGCCTCCCGAGTGCTGGAACTAAAGGCATaGACCACCACGCCCGGCTTCTCTGTGCGGCTTCTT | + |
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Preference number: 3 (lower is better) Translates to: PASASRVLELKA*TTTPGFSVRLL Trigger: AAGAAGCCGCACAGAGAAGCCGGGCGTGGTGGTGCATGCCTTTAGTTCCAGCACTCGGGAGGCAGAGGCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| 3UTR GCA 72 bp | TTCGGCAAGGGCGGCGCTGTCCGGGGTGCTGAAATCTaGTGCCTGGTCTCTCTTATAATTTCTGTAAGCCTC | + |
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Preference number: 3 (lower is better) Translates to: FGKGGAVRGAEI*CLVSLIISVSL Trigger: GAGGCTTACAGAAATTATAAGAGAGACCAGGCAGCAGATTTCAGCACCCCGGACAGCGCCGCCCTTGCCGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| 3UTR-3UTR CAA 90 bp | CAGATCCCATCACAGATGGTTGTGAGCCACCATGTGGAATTGAACTCAGGACCTGAAACCACTGTTAGGTaGGATGGCACGAGTCTTCGG | + |
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Preference number: 3 (lower is better) Translates to: QIPSQMVVSHHVELNSGPETTVR*DGTSLR Trigger: CCGAAGACTCGTGCCATCCAACCTAACAGTGGTTTC...AGGTCCTGAGTTCAATTCCACATGGTGGCTCACAACCATCTGTGATGGGATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| 3UTR CCA 72 bp | GAAGAACCTCCTCACACGTTGTGGGTCTCCACTAGCTaGGCTGCCCAATTTGGGGGATTATCTCTTCTATTT | + |
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Preference number: 3 (lower is better) Translates to: EEPPHTLWVSTS*AAQFGGLSLLF Trigger: AAATAGAAGAGATAATCCCCCAAATTGGGCAGCCCAGCTAGTGGAGACCCACAACGTGTGAGGAGGTTCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| 3UTR-3UTR CAA 90 bp | GAAAACACTCCATATCTTCTTGTCAGAGCAGGATCATATGAGGGCCCATTATGGAGAGAAAACAGAGGGTaGGGGCCTCTGAGAAGTTGG | + |
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Preference number: 3 (lower is better) Translates to: ENTPYLLVRAGSYEGPLWRENRG*GPLRSW Trigger: CCAACTTCTCAGAGGCCCCAACCCTCTGTTTTCTCT...CCATAATGGGCCCTCATATGATCCTGCTCTGACAAGAAGATATGGAGTGTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| 3UTR GCA 72 bp | TTAGATTTATTTTTGTGCTCTGCCTGCATGTACACCTaGAACCCGGAGGCATCAGATCCCATCACAGATGGT | + |
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Preference number: 3 (lower is better) Translates to: LDLFLCSACMYT*NPEASDPITDG Trigger: ACCATCTGTGATGGGATCTGATGCCTCCGGGTTGCAGGTGTACATGCAGGCAGAGCACAAAAATAAATCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| 3UTR GCA 72 bp | GAGGGATGGGGAGTATCCAATAGCTCTACTCAAAGATaGAGGGCAATGAAAACACTCCATATCTTCTTGTCA | + |
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Preference number: 3 (lower is better) Translates to: EGWGVSNSSTQR*RAMKTLHIFLS Trigger: TGACAAGAAGATATGGAGTGTTTTCATTGCCCTGCATCTTTGAGTAGAGCTATTGGATACTCCCCATCCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| 3UTR-3UTR CAA 90 bp | ACTCCATATCTTCTTGTCAGAGCAGGATCATATGAGGGCCCATTATGGAGCAATAGAGGTATAGAGCTTTaGTGTCTGAGACTCCCAAAA | + |
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Preference number: 3 (lower is better) Translates to: TPYLLVRAGSYEGPLWSNRGIEL*CLRLPK Trigger: TTTTGGGAGTCTCAGACACAAAAGCTCTATACCTCT...ATTGCTCCATAATGGGCCCTCATATGATCCTGCTCTGACAAGAAGATATGGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| 3UTR TCA 72 bp | AAACACTCCATATCTTCTTGTCAGAGCAGGATCATATaGGGGCCCATTATGGAGCAATTTAGAGCAATGCCT | + |
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Preference number: 3 (lower is better) Translates to: KHSISSCQSRII*GPIMEQFRAMP Trigger: AGGCATTGCTCTAAATTGCTCCATAATGGGCCCTCATATGATCCTGCTCTGACAAGAAGATATGGAGTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| 3UTR TCA 72 bp | GAGTATCCAATAGCTCTACTCAAAGATGCAGGGCAATaGAAACACTCCATATCTTCTTGTCAGAGCAGGATC | + |
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Preference number: 3 (lower is better) Translates to: EYPIALLKDAGQ*KHSISSCQSRI Trigger: GATCCTGCTCTGACAAGAAGATATGGAGTGTTTTCATTGCCCTGCATCTTTGAGTAGAGCTATTGGATACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| 3UTR-3UTR CAA 90 bp | GAGGGATGGGGAGTATCCAATAGCTCTACTCAAAGATGCAGGGCAATGAAAACAGTGGTTCTTTCTCTTTaGCAATCTTTATACCTCCAA | + |
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Preference number: 3 (lower is better) Translates to: EGWGVSNSSTQRCRAMKTVVLSL*QSLYLQ Trigger: TTGGAGGTATAAAGATTGCAAAAGAGAAAGAACCAC...TGTTTTCATTGCCCTGCATCTTTGAGTAGAGCTATTGGATACTCCCCATCCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| 3UTR TCA 72 bp | TTAAGACTATATGTCACCGAGTGGCTACTTAGCCTCTaGGCTTGGTTTTTCACTCATAAAGTGGCTCTGATA | + |
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Preference number: 3 (lower is better) Translates to: LRLYVTEWLLSL*AWFFTHKVALI Trigger: TATCAGAGCCACTTTATGAGTGAAAAACCAAGCTCAGAGGCTAAGTAGCCACTCGGTGACATATAGTCTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| 3UTR CCA 72 bp | ATTATCTCTTCTATTTATAAAAAGGGCTTAGAGGGATaGGGAGTATCCAATAGCTCTACTCAAAGATGCAGG | + |
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Preference number: 3 (lower is better) Translates to: IISSIYKKGLEG*GVSNSSTQRCR Trigger: CCTGCATCTTTGAGTAGAGCTATTGGATACTCCCCATCCCTCTAAGCCCTTTTTATAAATAGAAGAGATAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| 3UTR TCA 72 bp | ATCTTTATACCTCCAACCTTTCATAACTTTAGATTTTaGTTACAGCAGATAAATCTTTTCCGGGCAACCTCT | + |
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Preference number: 3 (lower is better) Translates to: IFIPPTFHNFRF*LQQINLFRATS Trigger: AGAGGTTGCCCGGAAAAGATTTATCTGCTGTAATCAAAATCTAAAGTTATGAAAGGTTGGAGGTATAAAGAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS-3UTR TCA 90 bp | TTAGGTTGGATGGCACGAGTCTTCGGCAAGGGCGGCGCTGTCCGGGGTGCTGAAGGTCTAGTGGCCCAATaGTGTCATACCACACAGGAC | + |
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Preference number: 4 (lower is better) Translates to: LGWMARVFGKGGAVRGAEGLVAQ*CHTTQD Trigger: GTCCTGTGTGGTATGACATCATTGGGCCACTAGACC...TTCAGCACCCCGGACAGCGCCGCCCTTGCCGAAGACTCGTGCCATCCAACCTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| 3UTR CAA 72 bp | CATGCACCACCACGCCCGGCTTCTCTGTGCGGCTTCTaGAAGAACCTCCTCACACGTTGTGGGTCTCCACTA | + |
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Preference number: 4 (lower is better) Translates to: HAPPRPASLCGF*KNLLTRCGSPL Trigger: TAGTGGAGACCCACAACGTGTGAGGAGGTTCTTCAAGAAGCCGCACAGAGAAGCCGGGCGTGGTGGTGCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS-3UTR GCA 90 bp | GAGTCATTTTCCTATTCTTGGGCCCCAAGGACACCCATCTCCTGTCTTCCCTTCCCCAGCCGCTCTGTCTaGAGGTCACACTCATGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ESFSYSWAPRTPISCLPFPSRSV*RSHSCR Trigger: CCTGCATGAGTGTGACCTGCAGACAGAGCGGCTGGG...GAAGGGAAGACAGGAGATGGGTGTCCTTGGGGCCCAAGAATAGGAAAATGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS-3UTR CCA 90 bp | TTAGGTTGGATGGCACGAGTCTTCGGCAAGGGCGGCGCTGTCCGGGGTGCTGAATCTTGGTTAAACATTTaGGGTTCCCATCTGGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: LGWMARVFGKGGAVRGAESWLNI*GSHLGQ Trigger: CTGACCCAGATGGGAACCCCAAATGTTTAACCAAGA...TTCAGCACCCCGGACAGCGCCGCCCTTGCCGAAGACTCGTGCCATCCAACCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS-3UTR TCA 90 bp | TTCTTGGGCCCCAAGGACACCCATCTCCTGTCTTCCCTTCGTGGTTCTTTCTCTATCTCATACTCCACCTaGTGTGAGGAGCCACGGCTA | + |
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Preference number: 4 (lower is better) Translates to: FLGPKDTHLLSSLRGSFSISYST*CEEPRL Trigger: TAGCCGTGGCTCCTCACATCAGGTGGAGTATGAGAT...AGAGAAAGAACCACGAAGGGAAGACAGGAGATGGGTGTCCTTGGGGCCCAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS-3UTR TCA 90 bp | ATCTCAGCCCAAGATGCTCACAGCTCACAGGGAGGGACTCAAGTGCAAACGTCTATGAGAACTGCCACCTaGGGACACAGCCTGGAAACA | + |
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Preference number: 4 (lower is better) Translates to: ISAQDAHSSQGGTQVQTSMRTAT*GHSLET Trigger: TGTTTCCAGGCTGTGTCCTCAGGTGGCAGTTCTCAT...AGACGTTTGCACTTGAGTCCCTCCCTGTGAGCTGTGAGCATCTTGGGCTGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS-3UTR CCA 90 bp | TTTGTGTCTGAGACTCCCAAAAGGAAACCACTGTTAGGTTGGATGGCACGAGTCCCAGGCATGTACTTCTaGATCACCTCTGGGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: FVSETPKRKPLLGWMARVPGMYF*ITSGGC Trigger: GCAGCCCCCAGAGGTGATCCAGAAGTACATGCCTGG...GACTCGTGCCATCCAACCTAACAGTGGTTTCCTTTTGGGAGTCTCAGACACAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS-3UTR CCA 90 bp | ATCTCAGCCCAAGATGCTCACAGCTCACAGGGAGGGACTCAAGTGCAAACGTCTAGGCCAAAGAACTCCTaGTATACTTCCACCAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: ISAQDAHSSQGGTQVQTSRPKNS*YTSTRG Trigger: GCCTCTGGTGGAAGTATACCAGGAGTTCTTTGGCCT...AGACGTTTGCACTTGAGTCCCTCCCTGTGAGCTGTGAGCATCTTGGGCTGAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS-3UTR CCA 90 bp | TATTCTTGGGCCCCAAGGACACCCATCTCCTGTCTTCCCTTCGTGGTTCTTTCTACTGAGTGCTCATACTaGGTCTTCACCTGGTCTCGC | + |
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Preference number: 4 (lower is better) Translates to: YSWAPRTPISCLPFVVLSTECSY*VFTWSR Trigger: GCGAGACCAGGTGAAGACCCAGTATGAGCACTCAGT...AGAAAGAACCACGAAGGGAAGACAGGAGATGGGTGTCCTTGGGGCCCAAGAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS-3UTR TCA 90 bp | GATTATGAGAATAATGTGCCCCTGGGTCAGTCAAAATCAGAAGCCAGCACCTCCGTCCTGCTTGGTGACTaGGAAAAGCAGCCCTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: DYENNVPLGQSKSEASTSVLLGD*EKQPFG Trigger: CCCAAAGGGCTGCTTTTCTCAGTCACCAAGCAGGAC...GGAGGTGCTGGCTTCTGATTTTGACTGACCCAGGGGCACATTATTCTCATAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS-3UTR GCA 90 bp | TTTTTGTGCTCTGCCTGCATGTACACCTGCAACCCGGAGGCATCAGATCCCATCGTCTTCAACAGGTCCTaGTTGGTGACTGAGAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: FLCSACMYTCNPEASDPIVFNRS*LVTEKS Trigger: GCTTTTCTCAGTCACCAAGCAGGACCTGTTGAAGAC...GATGGGATCTGATGCCTCCGGGTTGCAGGTGTACATGCAGGCAGAGCACAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS-3UTR CCA 90 bp | TATTCTTGGGCCCCAAGGACACCCATCTCCTGTCTTCCCTTCGTGGTTCTTTCTTGTACTTGCGGAGCATaGCCTCCGATTTCTGTAGGT | + |
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Preference number: 4 (lower is better) Translates to: YSWAPRTPISCLPFVVLSCTCGA*PPISVG Trigger: ACCTACAGAAATCGGAGGCCATGCTCCGCAAGTACA...AGAAAGAACCACGAAGGGAAGACAGGAGATGGGTGTCCTTGGGGCCCAAGAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS-3UTR CCA 90 bp | ATCTCAGCCCAAGATGCTCACAGCTCACAGGGAGGGACTCAAGTGCAAACGTCTTGTGATCGATGTCCATaGTCTTCCGGAACTCCATGT | + |
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Preference number: 4 (lower is better) Translates to: ISAQDAHSSQGGTQVQTSCDRCP*SSGTPC Trigger: ACATGGAGTTCCGGAAGACCATGGACATCGATCACA...AGACGTTTGCACTTGAGTCCCTCCCTGTGAGCTGTGAGCATCTTGGGCTGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS-3UTR CCA 90 bp | TTTGTGTCTGAGACTCCCAAAAGGAAACCACTGTTAGGTTGGATGGCACGAGTCGGTCTCGCACATACATaGACTTGGGGATCTCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: FVSETPKRKPLLGWMARVGLAHT*TWGSPH Trigger: GTGGGGAGATCCCCAAGTCCATGTATGTGCGAGACC...GACTCGTGCCATCCAACCTAACAGTGGTTTCCTTTTGGGAGTCTCAGACACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| 3UTR CAA 72 bp | GGAGAGATGAGGCCAAGTAGAGTCATTTTCCTATTCTaGGGCCCCAAGGACACCCATCTCCTGTCTTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: GEMRPSRVIFLF*GPKDTHLLSSL Trigger: AAGGGAAGACAGGAGATGGGTGTCCTTGGGGCCCAAGAATAGGAAAATGACTCTACTTGGCCTCATCTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS-3UTR GCA 90 bp | TGGTGTGAGGATGGCATGAGCCTACCTTGTAAAGCTCTTGGAACAGTGACAATCTCCTCATCGTACTTCTaGATGCCCTCGTCTGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: WCEDGMSLPCKALGTVTISSSYF*MPSSGR Trigger: TCTCCCAGACGAGGGCATGCAGAAGTACGATGAGGA...GATTGTCACTGTTCCAAGAGCTTTACAAGGTAGGCTCATGCCATCCTCACACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS-3UTR TCA 90 bp | GAGGGATGGGGAGTATCCAATAGCTCTACTCAAAGATGCAGGGCAATGAAAACAACAGGTCCTGCTTGGTaGCTGAGAAAAGCAGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: EGWGVSNSSTQRCRAMKTTGPAW*LRKAAL Trigger: AAGGGCTGCTTTTCTCAGTCACCAAGCAGGACCTGT...TGTTTTCATTGCCCTGCATCTTTGAGTAGAGCTATTGGATACTCCCCATCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS-3UTR TCA 90 bp | GGATGGGGAGTATCCAATAGCTCTACTCAAAGATGCAGGGCAATGAAAACACTCTCAGGAATGGCTTCATaGGATTGTAGCCCACCGGGA | + |
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Preference number: 4 (lower is better) Translates to: GWGVSNSSTQRCRAMKTLSGMAS*DCSPPG Trigger: TCCCGGTGGGCTACAATCTCATGAAGCCATTCCTGA...GAGTGTTTTCATTGCCCTGCATCTTTGAGTAGAGCTATTGGATACTCCCCATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS-3UTR GCA 90 bp | GATTATGAGAATAATGTGCCCCTGGGTCAGTCAAAATCAGAAGCCAGCACCTCCTGCAGGTCACACTCATaGAGGATACGTTCACAGTCC | + |
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Preference number: 4 (lower is better) Translates to: DYENNVPLGQSKSEASTSCRSHS*RIRSQS Trigger: GGACTGTGAACGTATCCTGCATGAGTGTGACCTGCA...GGAGGTGCTGGCTTCTGATTTTGACTGACCCAGGGGCACATTATTCTCATAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS-3UTR GCA 90 bp | GAAAACACTCCATATCTTCTTGTCAGAGCAGGATCATATGAGGGCCCATTATGGCCGTCAGATGAGAACTaGCACCTGAGGACACAGCCT | + |
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Preference number: 4 (lower is better) Translates to: ENTPYLLVRAGSYEGPLWPSDEN*HLRTQP Trigger: AGGCTGTGTCCTCAGGTGGCAGTTCTCATCTGACGG...CCATAATGGGCCCTCATATGATCCTGCTCTGACAAGAAGATATGGAGTGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS-3UTR CCA 90 bp | TTTGTGTCTGAGACTCCCAAAAGGAAACCACTGTTAGGTTGGATGGCACGAGTCCACAGTCCCTCATCTTaGTCTTCAACAGGTCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: FVSETPKRKPLLGWMARVHSPSS*SSTGPA Trigger: AGCAGGACCTGTTGAAGACCAAGATGAGGGACTGTG...GACTCGTGCCATCCAACCTAACAGTGGTTTCCTTTTGGGAGTCTCAGACACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS-3UTR CCA 90 bp | GGATGGGGAGTATCCAATAGCTCTACTCAAAGATGCAGGGCAATGAAAACACTCGCACATACATGGACTTaGGGATCTCCCCACCGTAGT | + |
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Preference number: 4 (lower is better) Translates to: GWGVSNSSTQRCRAMKTLAHTWT*GSPHRS Trigger: ACTACGGTGGGGAGATCCCCAAGTCCATGTATGTGC...GAGTGTTTTCATTGCCCTGCATCTTTGAGTAGAGCTATTGGATACTCCCCATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS-3UTR CCA 90 bp | GAAAACACTCCATATCTTCTTGTCAGAGCAGGATCATATGAGGGCCCATTATGGCTGCATGCCCTCGTCTaGGAGAAGCACTTCAACCGT | + |
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Preference number: 4 (lower is better) Translates to: ENTPYLLVRAGSYEGPLWLHALV*EKHFNR Trigger: ACGGTTGAAGTGCTTCTCCCAGACGAGGGCATGCAG...CCATAATGGGCCCTCATATGATCCTGCTCTGACAAGAAGATATGGAGTGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS-3UTR GCA 90 bp | GATTATGAGAATAATGTGCCCCTGGGTCAGTCAAAATCAGAAGCCAGCACCTCCCTAATCTGCACTGAGTaGTCATACTGGGTCTTCACC | + |
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Preference number: 4 (lower is better) Translates to: DYENNVPLGQSKSEASTSLICTE*SYWVFT Trigger: GGTGAAGACCCAGTATGAGCACTCAGTGCAGATTAG...GGAGGTGCTGGCTTCTGATTTTGACTGACCCAGGGGCACATTATTCTCATAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS-3UTR TCA 90 bp | CTGGGCTGCCCAATTTGGGGGATTATCTCTTCTATTTATAAAAAGGGCTTAGAGTGCCAGTCAAGGATGTaGTCGATGTCCATGGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LGCPIWGIISSIYKKGLECQSRM*SMSMVF Trigger: GAAGACCATGGACATCGATCACATCCTTGACTGGCA...CTCTAAGCCCTTTTTATAAATAGAAGAGATAATCCCCCAAATTGGGCAGCCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS-3UTR CCA 90 bp | GAGGGATGGGGAGTATCCAATAGCTCTACTCAAAGATGCAGGGCAATGAAAACAGAATTTCAGGGTCTCTaGGTAATTCTCTTCAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: EGWGVSNSSTQRCRAMKTEFQGL*VILFKE Trigger: CTCCTTGAAGAGAATTACCCAGAGACCCTGAAATTC...TGTTTTCATTGCCCTGCATCTTTGAGTAGAGCTATTGGATACTCCCCATCCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| 3UTR CAA 72 bp | CAAAGATGCAGGGCAATGAAAACACTCCATATCTTCTaGTCAGAGCAGGATCATATGAGGGCCCATTATGGA | + |
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Preference number: 4 (lower is better) Translates to: QRCRAMKTLHIF*SEQDHMRAHYG Trigger: TCCATAATGGGCCCTCATATGATCCTGCTCTGACAAGAAGATATGGAGTGTTTTCATTGCCCTGCATCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| 3UTR CAA 72 bp | CCCATCTCCTGTCTTCCCTTCGTGGTTCTTTCTCTTTaGCAATCTTTATACCTCCAACCTTTCATAACTTTA | + |
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Preference number: 4 (lower is better) Translates to: PISCLPFVVLSL*QSLYLQPFITL Trigger: TAAAGTTATGAAAGGTTGGAGGTATAAAGATTGCAAAAGAGAAAGAACCACGAAGGGAAGACAGGAGATGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS CCA 90 bp | CTAGACAGGGGTGAGCTCCTCATCGTACTTCTGCATGCCCTCGTCTaGGAGAAGCACTTCAACCGTGAAGCTGACCTTCTTGGCGTGGAC | + |
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Preference number: 5 (lower is better) Translates to: LDRGELLIVLLHALV*EKHFNREADLLGVD Trigger: GTCCACGCCAAGAAGGTCAGCTTCACGGTTGAAGTGCTTCTCCCAGACGAGGGCATGCAGAAGTACGATGAGGAGCTCACCCCTGTCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS GCA 90 bp | TGCAGGATACGTTCACAGTCCCTCATCTTGGTCTTCAACAGGTCCTaGTTGGTGACTGAGAAAAGCAGCCCTTTGGGGTCTAGTGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: CRIRSQSLILVFNRS*LVTEKSSPLGSSGP Trigger: TGGGCCACTAGACCCCAAAGGGCTGCTTTTCTCAGTCACCAAGCAGGACCTGTTGAAGACCAAGATGAGGGACTGTGAACGTATCCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS GCA 90 bp | GTTTCAATCTTCCTCCCCAGCCGCTCTGTCTGCAGGTCACACTCATaGAGGATACGTTCACAGTCCCTCATCTTGGTCTTCAACAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: VSIFLPSRSVCRSHS*RIRSQSLILVFNRS Trigger: GGACCTGTTGAAGACCAAGATGAGGGACTGTGAACGTATCCTGCATGAGTGTGACCTGCAGACAGAGCGGCTGGGGAGGAAGATTGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS-3UTR CAA 90 bp | GACTCAAGTGCAAACGTCTTAGGAGAGATGAGGCCAAGTAGAGTCATTTTCCTAACATTTTCTCGGAACTaGGCCAGGGTCTCTGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: DSSANVLGEMRPSRVIFLTFSRN*ARVSAC Trigger: GCAGGCAGAGACCCTGGCCAAGTTCCGAGAAAATGT...TAGGAAAATGACTCTACTTGGCCTCATCTCTCCTAAGACGTTTGCACTTGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS-3UTR CAA 90 bp | TATTCTTGGGCCCCAAGGACACCCATCTCCTGTCTTCCCTTCGTGGTTCTTTCTATCTTGGTTAAACATTaGGGGTTCCCATCTGGGTCA | + |
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Preference number: 5 (lower is better) Translates to: YSWAPRTPISCLPFVVLSILVKH*GFPSGS Trigger: TGACCCAGATGGGAACCCCAAATGTTTAACCAAGAT...AGAAAGAACCACGAAGGGAAGACAGGAGATGGGTGTCCTTGGGGCCCAAGAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS-3UTR CAA 90 bp | GGATGGGGAGTATCCAATAGCTCTACTCAAAGATGCAGGGCAATGAAAACACTCAATAATCATCAGGGTTaGGCAGGGCAGGCAGCACAT | + |
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Preference number: 5 (lower is better) Translates to: GWGVSNSSTQRCRAMKTLNNHQG*AGQAAH Trigger: ATGTGCTGCCTGCCCTGCCAAACCCTGATGATTATT...GAGTGTTTTCATTGCCCTGCATCTTTGAGTAGAGCTATTGGATACTCCCCATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS-3UTR CAA 90 bp | GGGATTATCTCTTCTATTTATAAAAAGGGCTTAGAGGGATGGGGAGTATCCAATTTCAACAGGTCCTGCTaGGTGACTGAGAAAAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: GIISSIYKKGLEGWGVSNFNRSC*VTEKSS Trigger: GCTGCTTTTCTCAGTCACCAAGCAGGACCTGTTGAA...ATTGGATACTCCCCATCCCTCTAAGCCCTTTTTATAAATAGAAGAGATAATCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS GCA 72 bp | TTCCTCCCCAGCCGCTCTGTCTGCAGGTCACACTCATaGAGGATACGTTCACAGTCCCTCATCTTGGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: FLPSRSVCRSHS*RIRSQSLILVF Trigger: GAAGACCAAGATGAGGGACTGTGAACGTATCCTGCATGAGTGTGACCTGCAGACAGAGCGGCTGGGGAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS TCA 72 bp | AGTCCCTCATCTTGGTCTTCAACAGGTCCTGCTTGGTaGCTGAGAAAAGCAGCCCTTTGGGGTCTAGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: SPSSWSSTGPAW*LRKAALWGLVA Trigger: GGCCACTAGACCCCAAAGGGCTGCTTTTCTCAGTCACCAAGCAGGACCTGTTGAAGACCAAGATGAGGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS CCA 72 bp | GGTGAGCTCCTCATCGTACTTCTGCATGCCCTCGTCTaGGAGAAGCACTTCAACCGTGAAGCTGACCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: GELLIVLLHALV*EKHFNREADLL Trigger: AAGAAGGTCAGCTTCACGGTTGAAGTGCTTCTCCCAGACGAGGGCATGCAGAAGTACGATGAGGAGCTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS GCA 72 bp | CGTTCACAGTCCCTCATCTTGGTCTTCAACAGGTCCTaGTTGGTGACTGAGAAAAGCAGCCCTTTGGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: RSQSLILVFNRS*LVTEKSSPLGS Trigger: AGACCCCAAAGGGCTGCTTTTCTCAGTCACCAAGCAGGACCTGTTGAAGACCAAGATGAGGGACTGTGAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS GCA 72 bp | ACAATGGTTTCAATCTTCCTCCCCAGCCGCTCTGTCTaGAGGTCACACTCATGCAGGATACGTTCACAGTCC | + |
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Preference number: 6 (lower is better) Translates to: TMVSIFLPSRSV*RSHSCRIRSQS Trigger: GGACTGTGAACGTATCCTGCATGAGTGTGACCTGCAGACAGAGCGGCTGGGGAGGAAGATTGAAACCATTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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| CDS CAA 90 bp | AGGATACGTTCACAGTCCCTCATCTTGGTCTTCAACAGGTCCTGCTaGGTGACTGAGAAAAGCAGCCCTTTGGGGTCTAGTGGCCCAATG | + |
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Preference number: 6 (lower is better) Translates to: RIRSQSLILVFNRSC*VTEKSSPLGSSGPM Trigger: CATTGGGCCACTAGACCCCAAAGGGCTGCTTTTCTCAGTCACCAAGCAGGACCTGTTGAAGACCAAGATGAGGGACTGTGAACGTATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068322.7 |
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