Pregenerated sensors for SEC14L2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003585Ensembl transcript IDs: ENSMUST00000003681.8
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACCGCCCACCCTGGCTACCTGCATCCCCAGGCAAGAGGAAGCCACTaGTGCTATTACACGCCTCCACAGAGAAGGGCCCACCAAGCCCTT | + |
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Preference number: 1 (lower is better) Translates to: TAHPGYLHPQARGSH*CYYTPPQRRAHQAL Trigger: AAGGGCTTGGTGGGCCCTTCTCTGTGGAGGCGTGTAATAGCAGCAGTGGCTTCCTCTTGCCTGGGGATGCAGGTAGCCAGGGTGGGCGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR GCA 90 bp | CCCAGCTATGGCTACCTTCCCGGGAAACCGCCCACCCTGGCTACCTaGATCCCCAGGCAAGAGGAAGCCACTGCTGCTATTACACGCCTC | + |
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Preference number: 1 (lower is better) Translates to: PSYGYLPGKPPTLAT*IPRQEEATAAITRL Trigger: GAGGCGTGTAATAGCAGCAGTGGCTTCCTCTTGCCTGGGGATGCAGGTAGCCAGGGTGGGCGGTTTCCCGGGAAGGTAGCCATAGCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR CCA 90 bp | GTAAACCAAGGCCAGGCTGTGCCCCTGAGATGTGTGACTAGATCCTaGGTAGCCTCGGCCCTCTCTGCTTGCCATCCCTGCACCTGCCCA | + |
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Preference number: 1 (lower is better) Translates to: VNQGQAVPLRCVTRS*VASALSACHPCTCP Trigger: TGGGCAGGTGCAGGGATGGCAAGCAGAGAGGGCCGAGGCTACCCAGGATCTAGTCACACATCTCAGGGGCACAGCCTGGCCTTGGTTTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR CCA 90 bp | CTCCACAGAGAAGGGCCCACCAAGCCCTTGCTCCTGTCAGGAGACTaGTTCTCAGGCACTGTGGGAGACTGGACTGGGAAGTGCACTCAG | + |
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Preference number: 1 (lower is better) Translates to: LHREGPTKPLLLSGD*FSGTVGDWTGKCTQ Trigger: CTGAGTGCACTTCCCAGTCCAGTCTCCCACAGTGCCTGAGAACCAGTCTCCTGACAGGAGCAAGGGCTTGGTGGGCCCTTCTCTGTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR GCA 90 bp | CTGCTGCTATTACACGCCTCCACAGAGAAGGGCCCACCAAGCCCTTaGTCCTGTCAGGAGACTGGTTCTCAGGCACTGTGGGAGACTGGA | + |
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Preference number: 1 (lower is better) Translates to: LLLLHASTEKGPPSP*SCQETGSQALWETG Trigger: TCCAGTCTCCCACAGTGCCTGAGAACCAGTCTCCTGACAGGAGCAAGGGCTTGGTGGGCCCTTCTCTGTGGAGGCGTGTAATAGCAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR CCA 90 bp | AATGTTTGCCCAGCTATGGCTACCTTCCCGGGAAACCGCCCACCCTaGCTACCTGCATCCCCAGGCAAGAGGAAGCCACTGCTGCTATTA | + |
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Preference number: 1 (lower is better) Translates to: NVCPAMATFPGNRPP*LPASPGKRKPLLLL Trigger: TAATAGCAGCAGTGGCTTCCTCTTGCCTGGGGATGCAGGTAGCCAGGGTGGGCGGTTTCCCGGGAAGGTAGCCATAGCTGGGCAAACATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR CCA 90 bp | GCTCCTGTCAGGAGACTGGTTCTCAGGCACTGTGGGAGACTGGACTaGGAAGTGCACTCAGTGCTGTCTCAGCCCCAATTGTCATCTTTG | + |
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Preference number: 1 (lower is better) Translates to: APVRRLVLRHCGRLD*EVHSVLSQPQLSSL Trigger: CAAAGATGACAATTGGGGCTGAGACAGCACTGAGTGCACTTCCCAGTCCAGTCTCCCACAGTGCCTGAGAACCAGTCTCCTGACAGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR GCA 90 bp | TCAGGAGACTGGTTCTCAGGCACTGTGGGAGACTGGACTGGGAAGTaGACTCAGTGCTGTCTCAGCCCCAATTGTCATCTTTGTGTAGGG | + |
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Preference number: 1 (lower is better) Translates to: SGDWFSGTVGDWTGK*TQCCLSPNCHLCVG Trigger: CCCTACACAAAGATGACAATTGGGGCTGAGACAGCACTGAGTGCACTTCCCAGTCCAGTCTCCCACAGTGCCTGAGAACCAGTCTCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR CCA 90 bp | CTGCCACCATCCTGTGTACCCTTCCCTCCCTGTCTCAGCTGTTCCTaGGCAGGTGAAGTTGGCAAAGTCTACAGGGTAGACATCATTACA | + |
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Preference number: 1 (lower is better) Translates to: LPPSCVPFPPCLSCS*AGEVGKVYRVDIIT Trigger: TGTAATGATGTCTACCCTGTAGACTTTGCCAACTTCACCTGCCCAGGAACAGCTGAGACAGGGAGGGAAGGGTACACAGGATGGTGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR TCA 90 bp | GAGGCTTGGGGCCCACCCACCGCCTCCTTGGTCCTTTCCTATCTATaGTCCCTGAAATTAATTACCCTTGTGCTTGTGGAGGGTTTAAAC | + |
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Preference number: 1 (lower is better) Translates to: EAWGPPTASLVLSYL*SLKLITLVLVEGLN Trigger: GTTTAAACCCTCCACAAGCACAAGGGTAATTAATTTCAGGGATCATAGATAGGAAAGGACCAAGGAGGCGGTGGGTGGGCCCCAAGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR CCA 90 bp | GGGACGAGAGACTCAAGGCTTATGACAAAAAGTTTCAAAGAGCTTTaGATACCCATCACATCTAGTGGCCTGCTACCTTGCAACCATCAT | + |
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Preference number: 1 (lower is better) Translates to: GTRDSRLMTKSFKEL*IPITSSGLLPCNHH Trigger: ATGATGGTTGCAAGGTAGCAGGCCACTAGATGTGATGGGTATCCAAAGCTCTTTGAAACTTTTTGTCATAAGCCTTGAGTCTCTCGTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR GCA 90 bp | CAAAAAGTTTCAAAGAGCTTTGGATACCCATCACATCTAGTGGCCTaGTACCTTGCAACCATCATTACAATCATGGAGGTTTGGTCCATG | + |
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Preference number: 1 (lower is better) Translates to: QKVSKSFGYPSHLVA*YLATIITIMEVWSM Trigger: CATGGACCAAACCTCCATGATTGTAATGATGGTTGCAAGGTAGCAGGCCACTAGATGTGATGGGTATCCAAAGCTCTTTGAAACTTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR-3UTR CCA 90 bp | CGGCCCTCTCTGCTTGCCATCCCTGCACCTGCCCAGAGCTCCCTCCGCTTCCTGGGGCAGCCTGTAACCTaGCTCTCAAGTTGTGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: RPSLLAIPAPAQSSLRFLGQPVT*LSSCVG Trigger: CCCCACACAACTTGAGAGCCAGGTTACAGGCTGCCC...CAGGAAGCGGAGGGAGCTCTGGGCAGGTGCAGGGATGGCAAGCAGAGAGGGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR-3UTR GCA 90 bp | CGGCCCTCTCTGCTTGCCATCCCTGCACCTGCCCAGAGCTCCCTCCGCTTCCTGGACTGGACTGGGAAGTaGACTCAGTGCTGTCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: RPSLLAIPAPAQSSLRFLDWTGK*TQCCLS Trigger: GCTGAGACAGCACTGAGTGCACTTCCCAGTCCAGTC...CAGGAAGCGGAGGGAGCTCTGGGCAGGTGCAGGGATGGCAAGCAGAGAGGGCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGCAGACCCCGCAAGGGCCTGGGGCATCCTTCCTGAATTCTGGGCAGCCTGTGGCACTGTGGGAGACTaGACTGGGAAGTGCACTCAG | + |
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Preference number: 2 (lower is better) Translates to: KADPARAWGILPEFWAACGTVGD*TGKCTQ Trigger: CTGAGTGCACTTCCCAGTCCAGTCTCCCACAGTGCC...ACAGGCTGCCCAGAATTCAGGAAGGATGCCCCAGGCCCTTGCGGGGTCTGCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR-3UTR CCA 90 bp | ACTAGATCCTGGGTAGCCTCGGCCCTCTCTGCTTGCCATCCCTGCACCTGCCCAGGTTCTCAGGCACTGTaGGAGACTGGACTGGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: TRSWVASALSACHPCTCPGSQAL*ETGLGS Trigger: ACTTCCCAGTCCAGTCTCCCACAGTGCCTGAGAACC...TGGGCAGGTGCAGGGATGGCAAGCAGAGAGGGCCGAGGCTACCCAGGATCTAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR-3UTR CCA 90 bp | GGCTCTCAAGTTGTGTGGGGTCAAGAGCTTTTTATTGCAAGGTCACCTGTGCCTGGAAACCGCCCACCCTaGCTACCTGCATCCCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: GSQVVWGQELFIARSPVPGNRPP*LPASPG Trigger: GCCTGGGGATGCAGGTAGCCAGGGTGGGCGGTTTCC...AGGCACAGGTGACCTTGCAATAAAAAGCTCTTGACCCCACACAACTTGAGAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR CAA 90 bp | GGCATCCTTCCTGAATTCTGGGCAGCCTGTAACCTGGCTCTCAAGTaGTGTGGGGTCAAGAGCTTTTTATTGCAAGGTCACCTGTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: GILPEFWAACNLALK*CGVKSFLLQGHLCL Trigger: CAGGCACAGGTGACCTTGCAATAAAAAGCTCTTGACCCCACACAACTTGAGAGCCAGGTTACAGGCTGCCCAGAATTCAGGAAGGATGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR CAA 90 bp | TCTAGTGGCCTGCTACCTTGCAACCATCATTACAATCATGGAGGTTaGGTCCATGTTCATTTAGGAGCAAGTTTCTCCCCAGCAGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: SSGLLPCNHHYNHGG*VHVHLGASFSPAAG Trigger: GCCAGCTGCTGGGGAGAAACTTGCTCCTAAATGAACATGGACCAAACCTCCATGATTGTAATGATGGTTGCAAGGTAGCAGGCCACTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCATGTTCATTTAGGAGCAAGTTTCTCCCCAGCAGCTGGCTTCCCTGAGTATTTGGTTGCAGGAAAATaGCTAAAGAAACTGACAGGA | + |
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Preference number: 2 (lower is better) Translates to: VHVHLGASFSPAAGFPEYLVAGK*LKKLTG Trigger: TCCTGTCAGTTTCTTTAGTCATTTTCCTGCAACCAA...ATACTCAGGGAAGCCAGCTGCTGGGGAGAAACTTGCTCCTAAATGAACATGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTCAAGTTGTGTGGGGTCAAGAGCTTTTTATTGCAAGGTCACCTGTGCCTGGTTTGGGCTAATTGGTTaGAGGAAAATGACTAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: LSSCVGSRAFYCKVTCAWFGLIG*RKMTKE Trigger: TTCTTTAGTCATTTTCCTGCAACCAATTAGCCCAAA...CCAGGCACAGGTGACCTTGCAATAAAAAGCTCTTGACCCCACACAACTTGAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR GCA 72 bp | TCCTGGGTAGCCTCGGCCCTCTCTGCTTGCCATCCCTaGACCTGCCCAGAGCTCCCTCCGCTTCCTGAGACG | + |
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Preference number: 3 (lower is better) Translates to: SWVASALSACHP*TCPELPPLPET Trigger: CGTCTCAGGAAGCGGAGGGAGCTCTGGGCAGGTGCAGGGATGGCAAGCAGAGAGGGCCGAGGCTACCCAGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR CCA 72 bp | CCAGCTATGGCTACCTTCCCGGGAAACCGCCCACCCTaGCTACCTGCATCCCCAGGCAAGAGGAAGCCACTG | + |
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Preference number: 3 (lower is better) Translates to: PAMATFPGNRPP*LPASPGKRKPL Trigger: CAGTGGCTTCCTCTTGCCTGGGGATGCAGGTAGCCAGGGTGGGCGGTTTCCCGGGAAGGTAGCCATAGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR CCA 72 bp | GGCCAGGCTGTGCCCCTGAGATGTGTGACTAGATCCTaGGTAGCCTCGGCCCTCTCTGCTTGCCATCCCTGC | + |
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Preference number: 3 (lower is better) Translates to: GQAVPLRCVTRS*VASALSACHPC Trigger: GCAGGGATGGCAAGCAGAGAGGGCCGAGGCTACCCAGGATCTAGTCACACATCTCAGGGGCACAGCCTGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR GCA 72 bp | GGCTACCTTCCCGGGAAACCGCCCACCCTGGCTACCTaGATCCCCAGGCAAGAGGAAGCCACTGCTGCTATT | + |
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Preference number: 3 (lower is better) Translates to: GYLPGKPPTLAT*IPRQEEATAAI Trigger: AATAGCAGCAGTGGCTTCCTCTTGCCTGGGGATGCAGGTAGCCAGGGTGGGCGGTTTCCCGGGAAGGTAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR-3UTR CAA 90 bp | CGGCCCTCTCTGCTTGCCATCCCTGCACCTGCCCAGAGCTCCCTCCGCTTCCTGCTGTCTCAGCCCCAATaGTCATCTTTGTGTAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: RPSLLAIPAPAQSSLRFLLSQPQ*SSLCRA Trigger: AGCCCTACACAAAGATGACAATTGGGGCTGAGACAG...CAGGAAGCGGAGGGAGCTCTGGGCAGGTGCAGGGATGGCAAGCAGAGAGGGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR GCA 72 bp | CCTGGCTACCTGCATCCCCAGGCAAGAGGAAGCCACTaGTGCTATTACACGCCTCCACAGAGAAGGGCCCAC | + |
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Preference number: 3 (lower is better) Translates to: PGYLHPQARGSH*CYYTPPQRRAH Trigger: GTGGGCCCTTCTCTGTGGAGGCGTGTAATAGCAGCAGTGGCTTCCTCTTGCCTGGGGATGCAGGTAGCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR CCA 72 bp | GAAGGGCCCACCAAGCCCTTGCTCCTGTCAGGAGACTaGTTCTCAGGCACTGTGGGAGACTGGACTGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: EGPTKPLLLSGD*FSGTVGDWTGK Trigger: CTTCCCAGTCCAGTCTCCCACAGTGCCTGAGAACCAGTCTCCTGACAGGAGCAAGGGCTTGGTGGGCCCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR CCA 72 bp | GACCCCGCAAGGGCCTGGGGCATCCTTCCTGAATTCTaGGCAGCCTGTAACCTGGCTCTCAAGTTGTGTGGG | + |
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Preference number: 3 (lower is better) Translates to: DPARAWGILPEF*AACNLALKLCG Trigger: CCCACACAACTTGAGAGCCAGGTTACAGGCTGCCCAGAATTCAGGAAGGATGCCCCAGGCCCTTGCGGGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR GCA 72 bp | TTACACGCCTCCACAGAGAAGGGCCCACCAAGCCCTTaGTCCTGTCAGGAGACTGGTTCTCAGGCACTGTGG | + |
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Preference number: 3 (lower is better) Translates to: LHASTEKGPPSP*SCQETGSQALW Trigger: CCACAGTGCCTGAGAACCAGTCTCCTGACAGGAGCAAGGGCTTGGTGGGCCCTTCTCTGTGGAGGCGTGTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR CCA 72 bp | CTGTCAGGAGACTGGTTCTCAGGCACTGTGGGAGACTaGACTGGGAAGTGCACTCAGTGCTGTCTCAGCCCC | + |
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Preference number: 3 (lower is better) Translates to: LSGDWFSGTVGD*TGKCTQCCLSP Trigger: GGGGCTGAGACAGCACTGAGTGCACTTCCCAGTCCAGTCTCCCACAGTGCCTGAGAACCAGTCTCCTGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR CCA 72 bp | CCTCGTTCAGAGGAAAAGGCAGACCCCGCAAGGGCCTaGGGCATCCTTCCTGAATTCTGGGCAGCCTGTAAC | + |
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Preference number: 3 (lower is better) Translates to: PRSEEKADPARA*GILPEFWAACN Trigger: GTTACAGGCTGCCCAGAATTCAGGAAGGATGCCCCAGGCCCTTGCGGGGTCTGCCTTTTCCTCTGAACGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR CCA 72 bp | CCTTGCTCCTGTCAGGAGACTGGTTCTCAGGCACTGTaGGAGACTGGACTGGGAAGTGCACTCAGTGCTGTC | + |
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Preference number: 3 (lower is better) Translates to: PCSCQETGSQAL*ETGLGSALSAV Trigger: GACAGCACTGAGTGCACTTCCCAGTCCAGTCTCCCACAGTGCCTGAGAACCAGTCTCCTGACAGGAGCAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR GCA 72 bp | GGCACTGTGGGAGACTGGACTGGGAAGTGCACTCAGTaGTGTCTCAGCCCCAATTGTCATCTTTGTGTAGGG | + |
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Preference number: 3 (lower is better) Translates to: GTVGDWTGKCTQ*CLSPNCHLCVG Trigger: CCCTACACAAAGATGACAATTGGGGCTGAGACAGCACTGAGTGCACTTCCCAGTCCAGTCTCCCACAGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR TCA 72 bp | GGCCCACCCACCGCCTCCTTGGTCCTTTCCTATCTATaGTCCCTGAAATTAATTACCCTTGTGCTTGTGGAG | + |
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Preference number: 3 (lower is better) Translates to: GPPTASLVLSYL*SLKLITLVLVE Trigger: CTCCACAAGCACAAGGGTAATTAATTTCAGGGATCATAGATAGGAAAGGACCAAGGAGGCGGTGGGTGGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR CCA 72 bp | GACTCAAGGCTTATGACAAAAAGTTTCAAAGAGCTTTaGATACCCATCACATCTAGTGGCCTGCTACCTTGC | + |
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Preference number: 3 (lower is better) Translates to: DSRLMTKSFKEL*IPITSSGLLPC Trigger: GCAAGGTAGCAGGCCACTAGATGTGATGGGTATCCAAAGCTCTTTGAAACTTTTTGTCATAAGCCTTGAGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR GCA 90 bp | CGGCCCTCTCTGCTTGCCATCCCTGCACCTGCCCAGAGCTCCCTCCGCTTCCTGGAGCCTCGGGAGACCTaGACGGTGTGTTCATACTGC | + |
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Preference number: 4 (lower is better) Translates to: RPSLLAIPAPAQSSLRFLEPRET*TVCSYC Trigger: GCAGTATGAACACACCGTGCAGGTCTCCCGAGGCTC...CAGGAAGCGGAGGGAGCTCTGGGCAGGTGCAGGGATGGCAAGCAGAGAGGGCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR GCA 90 bp | ACTAGATCCTGGGTAGCCTCGGCCCTCTCTGCTTGCCATCCCTGCACCTGCCCATCGGAACTTGGCCAGTaGCTCCTCCTGTTTGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: TRSWVASALSACHPCTCPSELGQ*LLLFGA Trigger: AGCCCCAAACAGGAGGAGGCACTGGCCAAGTTCCGA...TGGGCAGGTGCAGGGATGGCAAGCAGAGAGGGCCGAGGCTACCCAGGATCTAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR CCA 90 bp | GGCTGGGCCAACGCCTCGTTCAGAGGAAAAGGCAGACCCCGCAAGGGCCTGGGGTTGGATCACCTCTGGTaGCTGCCAGCTGATGATTTT | + |
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Preference number: 4 (lower is better) Translates to: GWANASFRGKGRPRKGLGLDHLW*LPADDF Trigger: AAAATCATCAGCTGGCAGCCACCAGAGGTGATCCAA...CCCCAGGCCCTTGCGGGGTCTGCCTTTTCCTCTGAACGAGGCGTTGGCCCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR TCA 90 bp | AAGGCAGACCCCGCAAGGGCCTGGGGCATCCTTCCTGAATTCTGGGCAGCCTGTGTGGGCAGCACGTCCTaGACATTTTCTCGGAACTTG | + |
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Preference number: 4 (lower is better) Translates to: KADPARAWGILPEFWAACVGSTS*TFSRNL Trigger: CAAGTTCCGAGAAAATGTTCAGGACGTGCTGCCCAC...ACAGGCTGCCCAGAATTCAGGAAGGATGCCCCAGGCCCTTGCGGGGTCTGCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR CCA 90 bp | AAGGCAGACCCCGCAAGGGCCTGGGGCATCCTTCCTGAATTCTGGGCAGCCTGTCAGAACATAGATGCCTaGCTCACTGCAGGTGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: KADPARAWGILPEFWAACQNIDA*LTAGEG Trigger: ACCCTCACCTGCAGTGAGCCAGGCATCTATGTTCTG...ACAGGCTGCCCAGAATTCAGGAAGGATGCCCCAGGCCCTTGCGGGGTCTGCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR GCA 90 bp | TACACGCCTCCACAGAGAAGGGCCCACCAAGCCCTTGCTCCTGTCAGGAGACTGGTGTGTTCATACTGCTaGTTCACCTGGTCTCGCACG | + |
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Preference number: 4 (lower is better) Translates to: YTPPQRRAHQALAPVRRLVCSYC*FTWSRT Trigger: CGTGCGAGACCAGGTGAAGCAGCAGTATGAACACAC...CAGTCTCCTGACAGGAGCAAGGGCTTGGTGGGCCCTTCTCTGTGGAGGCGTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR CCA 90 bp | TACACGCCTCCACAGAGAAGGGCCCACCAAGCCCTTGCTCCTGTCAGGAGACTGCCTGACAGATACTGTTaGATCACCTCTGGTGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: YTPPQRRAHQALAPVRRLPDRYC*ITSGGC Trigger: GCAGCCACCAGAGGTGATCCAACAGTATCTGTCAGG...CAGTCTCCTGACAGGAGCAAGGGCTTGGTGGGCCCTTCTCTGTGGAGGCGTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR CCA 90 bp | CTACCTGCATCCCCAGGCAAGAGGAAGCCACTGCTGCTATTACACGCCTCCACATCATACTCCACTTGGTaGGAGGAGCCTCGGGAGACC | + |
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Preference number: 4 (lower is better) Translates to: LPASPGKRKPLLLLHASTSYSTW*EEPRET Trigger: GGTCTCCCGAGGCTCCTCCCACCAAGTGGAGTATGA...TGTGGAGGCGTGTAATAGCAGCAGTGGCTTCCTCTTGCCTGGGGATGCAGGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR CAA 72 bp | ATTACACGCCTCCACAGAGAAGGGCCCACCAAGCCCTaGCTCCTGTCAGGAGACTGGTTCTCAGGCACTGTG | + |
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Preference number: 4 (lower is better) Translates to: ITRLHREGPTKP*LLSGDWFSGTV Trigger: CACAGTGCCTGAGAACCAGTCTCCTGACAGGAGCAAGGGCTTGGTGGGCCCTTCTCTGTGGAGGCGTGTAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR TCA 90 bp | CTACCTGCATCCCCAGGCAAGAGGAAGCCACTGCTGCTATTACACGCCTCCACAGCCACATCTGCCGCCTaGCAGATACTGTTGGATCAC | + |
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Preference number: 4 (lower is better) Translates to: LPASPGKRKPLLLLHASTATSAA*QILLDH Trigger: GTGATCCAACAGTATCTGTCAGGCGGCAGATGTGGC...TGTGGAGGCGTGTAATAGCAGCAGTGGCTTCCTCTTGCCTGGGGATGCAGGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR TCA 90 bp | CGGCCCTCTCTGCTTGCCATCCCTGCACCTGCCCAGAGCTCCCTCCGCTTCCTGAGTCATAAATCATGGTaGTGGTCTCTATCTTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: RPSLLAIPAPAQSSLRFLSHKSW*WSLSSS Trigger: GGAAGAAGATAGAGACCATCACCATGATTTATGACT...CAGGAAGCGGAGGGAGCTCTGGGCAGGTGCAGGGATGGCAAGCAGAGAGGGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR CCA 90 bp | AAGCCCTTGCTCCTGTCAGGAGACTGGTTCTCAGGCACTGTGGGAGACTGGACTGTGTCTGCCCCCTGCTaGTTCATCTTCTCTTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: KPLLLSGDWFSGTVGDWTVSAPC*FIFSSA Trigger: AGCCGAAGAGAAGATGAACCAGCAGGGGGCAGACAC...AGTCCAGTCTCCCACAGTGCCTGAGAACCAGTCTCCTGACAGGAGCAAGGGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR TCA 90 bp | ATTGTAAACCAAGGCCAGGCTGTGCCCCTGAGATGTGTGACTAGATCCTGGGTACTGGCTCACTGCAGGTaGGGGTTCCATCCTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IVNQGQAVPLRCVTRSWVLAHCR*GFHPQA Trigger: TGCCTGAGGATGGAACCCTCACCTGCAGTGAGCCAG...TACCCAGGATCTAGTCACACATCTCAGGGGCACAGCCTGGCCTTGGTTTACAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR CCA 90 bp | GGTGAAGTTGGCAAAGTCTACAGGGTAGACATCATTACAGCCGGTCCCTGGAGAGTGCCTCCTCCTGTTTaGGGCTCAGGTCACCGACTC | + |
|
Preference number: 4 (lower is better) Translates to: GEVGKVYRVDIITAGPWRVPPPV*GSGHRL Trigger: GAGTCGGTGACCTGAGCCCCAAACAGGAGGAGGCAC...TCTCCAGGGACCGGCTGTAATGATGTCTACCCTGTAGACTTTGCCAACTTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR CCA 90 bp | AAGCCCTTGCTCCTGTCAGGAGACTGGTTCTCAGGCACTGTGGGAGACTGGACTCATGCTTTCGGAGCATaGCCTCTGACTTCTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KPLLLSGDWFSGTVGDWTHAFGA*PLTSAG Trigger: ACCTGCAGAAGTCAGAGGCCATGCTCCGAAAGCATG...AGTCCAGTCTCCCACAGTGCCTGAGAACCAGTCTCCTGACAGGAGCAAGGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR CAA 72 bp | GACTGGGAAGTGCACTCAGTGCTGTCTCAGCCCCAATaGTCATCTTTGTGTAGGGCTGCTCAAGCGGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DWEVHSVLSQPQ*SSLCRAAQAEG Trigger: ACCCTCCGCTTGAGCAGCCCTACACAAAGATGACAATTGGGGCTGAGACAGCACTGAGTGCACTTCCCAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR CCA 90 bp | CTACCTGCATCCCCAGGCAAGAGGAAGCCACTGCTGCTATTACACGCCTCCACACATTTTCTCGGAACTTaGCCAGTGCCTCCTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LPASPGKRKPLLLLHASTHFLGT*PVPPPV Trigger: AACAGGAGGAGGCACTGGCCAAGTTCCGAGAAAATG...TGTGGAGGCGTGTAATAGCAGCAGTGGCTTCCTCTTGCCTGGGGATGCAGGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR GCA 90 bp | GTTAATGTACCTAACAGCATTGTAAACCAAGGCCAGGCTGTGCCCCTGAGATGTGTCCTGAGCAGGTCCTaGTTGGAGGCGGAGAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: VNVPNSIVNQGQAVPLRCVLSRS*LEAENS Trigger: GCTGTTCTCCGCCTCCAAGCAGGACCTGCTCAGGAC...ACATCTCAGGGGCACAGCCTGGCCTTGGTTTACAATGCTGTTAGGTACATTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR GCA 90 bp | TGTTCCTGGGCAGGTGAAGTTGGCAAAGTCTACAGGGTAGACATCATTACAGCCCCCTCCGACATAAACTaGCACCTGAGGACACAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CSWAGEVGKVYRVDIITAPSDIN*HLRTQP Trigger: GGGCTGTGTCCTCAGGTGGCAGTTTATGTCGGAGGG...GGCTGTAATGATGTCTACCCTGTAGACTTTGCCAACTTCACCTGCCCAGGAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR GCA 90 bp | GTCCATGTTCATTTAGGAGCAAGTTTCTCCCCAGCAGCTGGCTTCCCTGAGTATGGGGTGTCTGCCCCCTaGTGGTTCATCTTCTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: VHVHLGASFSPAAGFPEYGVSAP*WFIFSS Trigger: CGAAGAGAAGATGAACCAGCAGGGGGCAGACACCCC...ATACTCAGGGAAGCCAGCTGCTGGGGAGAAACTTGCTCCTAAATGAACATGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR CCA 90 bp | CAGGAGACTGGTTCTCAGGCACTGTGGGAGACTGGACTGGGAAGTGCACTCAGTTATTCCACAGGCAGCTaGTCAGGGCTGATATGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QETGSQALWETGLGSALSYSTGS*SGLICL Trigger: CAAACATATCAGCCCTGACCAGCTGCCTGTGGAATA...ACTGAGTGCACTTCCCAGTCCAGTCTCCCACAGTGCCTGAGAACCAGTCTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR CCA 90 bp | GGAGCAAGTTTCTCCCCAGCAGCTGGCTTCCCTGAGTATGACATCCAATCGCTTCGTCAGGATCTGTCATaGTGCCTCCGTATTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GASFSPAAGFPEYDIQSLRQDLS*CLRIPQ Trigger: CTGTGGAATACGGAGGCACCATGACAGATCCTGACG...AAGCGATTGGATGTCATACTCAGGGAAGCCAGCTGCTGGGGAGAAACTTGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR CCA 90 bp | ATTGTAAACCAAGGCCAGGCTGTGCCCCTGAGATGTGTGACTAGATCCTGGGTATTCGGCTGCTTTGTCTaGAAGCAGGACCTCCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: IVNQGQAVPLRCVTRSWVFGCFV*KQDLHG Trigger: ACCGTGGAGGTCCTGCTTCCAGACAAAGCAGCCGAA...TACCCAGGATCTAGTCACACATCTCAGGGGCACAGCCTGGCCTTGGTTTACAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR TCA 90 bp | AAGAGCTTTGGATACCCATCACATCTAGTGGCCTGCTACCTTGCAACCATCATTCATCCAGAGGGCCGATaGTGTCGTACCAGACAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KSFGYPSHLVACYLATIIHPEGR*CRTRQG Trigger: GCCCTGTCTGGTACGACATCATCGGCCCTCTGGATG...AATGATGGTTGCAAGGTAGCAGGCCACTAGATGTGATGGGTATCCAAAGCTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR GCA 90 bp | TGGGGCATCCTTCCTGAATTCTGGGCAGCCTGTAACCTGGCTCTCAAGTTGTGTCATCTTCTCTTCGGCTaGTTTGTCTGGAAGCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: WGILPEFWAACNLALKLCHLLFG*FVWKQD Trigger: GTCCTGCTTCCAGACAAAGCAGCCGAAGAGAAGATG...ACACAACTTGAGAGCCAGGTTACAGGCTGCCCAGAATTCAGGAAGGATGCCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR CCA 90 bp | TGGGGCATCCTTCCTGAATTCTGGGCAGCCTGTAACCTGGCTCTCAAGTTGTGTAGCTTTGTGGTCTGCTaGATACACTCCTGCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: WGILPEFWAACNLALKLCSFVVC*IHSCRS Trigger: GCTTCTGCAGGAGTGTATCCAGCAGACCACAAAGCT...ACACAACTTGAGAGCCAGGTTACAGGCTGCCCAGAATTCAGGAAGGATGCCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR TCA 90 bp | GTTAATGTACCTAACAGCATTGTAAACCAAGGCCAGGCTGTGCCCCTGAGATGTGTTTCCAGAGGTGCTTaGGGCCGAGTCCTTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: VNVPNSIVNQGQAVPLRCVSRGA*GRVLHS Trigger: ACTGTGAAGGACTCGGCCTCAAGCACCTCTGGAAAC...ACATCTCAGGGGCACAGCCTGGCCTTGGTTTACAATGCTGTTAGGTACATTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR GCA 90 bp | GGCTCTCAAGTTGTGTGGGGTCAAGAGCTTTTTATTGCAAGGTCACCTGTGCCTATGGCCTCTGACTTCTaGAGGTCAAAGCTTCGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSQVVWGQELFIARSPVPMASDF*RSKLRA Trigger: AGCCCGAAGCTTTGACCTGCAGAAGTCAGAGGCCAT...AGGCACAGGTGACCTTGCAATAAAAAGCTCTTGACCCCACACAACTTGAGAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR GCA 90 bp | TGTTCCTGGGCAGGTGAAGTTGGCAAAGTCTACAGGGTAGACATCATTACAGCCACGGTGTGTTCATACTaGTGCTTCACCTGGTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: CSWAGEVGKVYRVDIITATVCSY*CFTWSR Trigger: GCGAGACCAGGTGAAGCAGCAGTATGAACACACCGT...GGCTGTAATGATGTCTACCCTGTAGACTTTGCCAACTTCACCTGCCCAGGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR GCA 90 bp | GGCTCTCAAGTTGTGTGGGGTCAAGAGCTTTTTATTGCAAGGTCACCTGTGCCTAGTCGTAGCCACATCTaGCGCCTGACAGATACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GSQVVWGQELFIARSPVPSRSHI*RLTDTV Trigger: AACAGTATCTGTCAGGCGGCAGATGTGGCTACGACT...AGGCACAGGTGACCTTGCAATAAAAAGCTCTTGACCCCACACAACTTGAGAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR CCA 90 bp | GGTGAAGTTGGCAAAGTCTACAGGGTAGACATCATTACAGCCGGTCCCTGGAGAATTGTATCTCTGGTTTaGCAGCACCTCCGTCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: GEVGKVYRVDIITAGPWRIVSLV*QHLRHL Trigger: GAGATGACGGAGGTGCTGCCAAACCAGAGATACAAT...TCTCCAGGGACCGGCTGTAATGATGTCTACCCTGTAGACTTTGCCAACTTCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| 3UTR CAA 72 bp | CCTGAATTCTGGGCAGCCTGTAACCTGGCTCTCAAGTaGTGTGGGGTCAAGAGCTTTTTATTGCAAGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PEFWAACNLALK*CGVKSFLLQGH Trigger: GTGACCTTGCAATAAAAAGCTCTTGACCCCACACAACTTGAGAGCCAGGTTACAGGCTGCCCAGAATTCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR GCA 90 bp | AAGAGCTTTGGATACCCATCACATCTAGTGGCCTGCTACCTTGCAACCATCATTCCTAGCTTTGTGGTCTaGTGGATACACTCCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KSFGYPSHLVACYLATIIPSFVV*WIHSCR Trigger: TCTGCAGGAGTGTATCCAGCAGACCACAAAGCTAGG...AATGATGGTTGCAAGGTAGCAGGCCACTAGATGTGATGGGTATCCAAAGCTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR GCA 90 bp | GTTAATGTACCTAACAGCATTGTAAACCAAGGCCAGGCTGTGCCCCTGAGATGTTTGTCAATGTCCTTTTaGTTCCGGAATTCCACATGC | + |
|
Preference number: 4 (lower is better) Translates to: VNVPNSIVNQGQAVPLRCLSMSF*FRNSTC Trigger: GCATGTGGAATTCCGGAAGCAAAAGGACATTGACAA...ACATCTCAGGGGCACAGCCTGGCCTTGGTTTACAATGCTGTTAGGTACATTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR CAA 90 bp | ACTAGATCCTGGGTAGCCTCGGCCCTCTCTGCTTGCCATCCCTGCACCTGCCCAGAGAACAGCAGACCTTaGGCATCCAGAGGGCCGATG | + |
|
Preference number: 5 (lower is better) Translates to: TRSWVASALSACHPCTCPENSRP*ASRGPM Trigger: CATCGGCCCTCTGGATGCCAAAGGTCTGCTGTTCTC...TGGGCAGGTGCAGGGATGGCAAGCAGAGAGGGCCGAGGCTACCCAGGATCTAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR CAA 90 bp | GGCTGGGCCAACGCCTCGTTCAGAGGAAAAGGCAGACCCCGCAAGGGCCTGGGGGCCACAGGAAACAGCTaGGGAGCTTTAACAACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: GWANASFRGKGRPRKGLGATGNS*GALTTN Trigger: GTTTGTTGTTAAAGCTCCCAAGCTGTTTCCTGTGGC...CCCCAGGCCCTTGCGGGGTCTGCCTTTTCCTCTGAACGAGGCGTTGGCCCAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR CAA 90 bp | CTAAGTTCTTCCCTGCCACCATCCTGTGTACCCTTCCCTCCCTGTCTCAGCTGTAGTGCCTCCTCCTGTTaGGGGCTCAGGTCACCGACT | + |
|
Preference number: 5 (lower is better) Translates to: LSSSLPPSCVPFPPCLSCSASSC*GLRSPT Trigger: AGTCGGTGACCTGAGCCCCAAACAGGAGGAGGCACT...ACAGCTGAGACAGGGAGGGAAGGGTACACAGGATGGTGGCAGGGAAGAACTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR CAA 90 bp | CTAAGTTCTTCCCTGCCACCATCCTGTGTACCCTTCCCTCCCTGTCTCAGCTGTGGTTTCCAGAGGTGCTaGAGGCCGAGTCCTTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: LSSSLPPSCVPFPPCLSCGFQRC*RPSPSQ Trigger: CTGTGAAGGACTCGGCCTCAAGCACCTCTGGAAACC...ACAGCTGAGACAGGGAGGGAAGGGTACACAGGATGGTGGCAGGGAAGAACTTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR CAA 90 bp | CTAAGTTCTTCCCTGCCACCATCCTGTGTACCCTTCCCTCCCTGTCTCAGCTGTAATCTCATACTCCACTaGGTGGGAGGAGCCTCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LSSSLPPSCVPFPPCLSCNLILH*VGGASG Trigger: TCCCGAGGCTCCTCCCACCAAGTGGAGTATGAGATT...ACAGCTGAGACAGGGAGGGAAGGGTACACAGGATGGTGGCAGGGAAGAACTTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR CAA 90 bp | AAGGCAGACCCCGCAAGGGCCTGGGGCATCCTTCCTGAATTCTGGGCAGCCTGTTGCCAGCTGATGATTTaGTCAATGTCCTTTTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KADPARAWGILPEFWAACCQLMI*SMSFCF Trigger: GAAGCAAAAGGACATTGACAAAATCATCAGCTGGCA...ACAGGCTGCCCAGAATTCAGGAAGGATGCCCCAGGCCCTTGCGGGGTCTGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS GCA 90 bp | ATCACCTCTGGTGGCTGCCAGCTGATGATTTTGTCAATGTCCTTTTaGTTCCGGAATTCCACATGCTTTCGGAGCATGGCCTCTGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: ITSGGCQLMILSMSF*FRNSTCFRSMASDF Trigger: GAAGTCAGAGGCCATGCTCCGAAAGCATGTGGAATTCCGGAAGCAAAAGGACATTGACAAAATCATCAGCTGGCAGCCACCAGAGGTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR CAA 90 bp | GACATCCAATCGCTTCACTTCTTTCTAAGTTCTTCCCTGCCACCATCCTGTGTAACATTTTCTCGGAACTaGGCCAGTGCCTCCTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: DIQSLHFFLSSSLPPSCVTFSRN*ASASSC Trigger: ACAGGAGGAGGCACTGGCCAAGTTCCGAGAAAATGT...TACACAGGATGGTGGCAGGGAAGAACTTAGAAAGAAGTGAAGCGATTGGATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR CAA 90 bp | GGTGAAGTTGGCAAAGTCTACAGGGTAGACATCATTACAGCCGGTCCCTGGAGATCAGGGCTGATATGTTaGAGTAAAACCTCCTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GEVGKVYRVDIITAGPWRSGLIC*SKTSFQ Trigger: CTGGAAGGAGGTTTTACTCAAACATATCAGCCCTGA...TCTCCAGGGACCGGCTGTAATGATGTCTACCCTGTAGACTTTGCCAACTTCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR CAA 90 bp | TTCCCTGAGTATGACATCCAATCGCTTCACTTCTTTCTAAGTTCTTCCCTGCCATTCTCTTCGGCTGCTTaGTCTGGAAGCAGGACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FPEYDIQSLHFFLSSSLPFSSAA*SGSRTS Trigger: GGAGGTCCTGCTTCCAGACAAAGCAGCCGAAGAGAA...TGGCAGGGAAGAACTTAGAAAGAAGTGAAGCGATTGGATGTCATACTCAGGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR CAA 90 bp | TCCAGTCTGAAGTCTTCCCTCCAGCCCAGTTTCTTTGGGCTAATTGGTTGCAGGTTTGTCAATGTCCTTTaGCTTCCGGAATTCCACATG | + |
|
Preference number: 5 (lower is better) Translates to: SSLKSSLQPSFFGLIGCRFVNVL*LPEFHM Trigger: CATGTGGAATTCCGGAAGCAAAAGGACATTGACAAA...CCTGCAACCAATTAGCCCAAAGAAACTGGGCTGGAGGGAAGACTTCAGACTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS-3UTR CAA 90 bp | GTCCATGTTCATTTAGGAGCAAGTTTCTCCCCAGCAGCTGGCTTCCCTGAGTATATCTTAGATTTACACTaGGGATTTCCGTCAGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: VHVHLGASFSPAAGFPEYILDLH*GFPSGS Trigger: AGATCCTGACGGAAATCCCAAGTGTAAATCTAAGAT...ATACTCAGGGAAGCCAGCTGCTGGGGAGAAACTTGCTCCTAAATGAACATGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS GCA 72 bp | TTCAAACATGGTGAGGAACTCTCCATAGGCCTCCACTaGAGGTTTCCAGAGGTGCTTGAGGCCGAGTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FKHGEELSIGLH*RFPEVLEAESF Trigger: GAAGGACTCGGCCTCAAGCACCTCTGGAAACCTGCAGTGGAGGCCTATGGAGAGTTCCTCACCATGTTTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS GCA 72 bp | GGTGGCTGCCAGCTGATGATTTTGTCAATGTCCTTTTaGTTCCGGAATTCCACATGCTTTCGGAGCATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GGCQLMILSMSF*FRNSTCFRSMA Trigger: GGCCATGCTCCGAAAGCATGTGGAATTCCGGAAGCAAAAGGACATTGACAAAATCATCAGCTGGCAGCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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| CDS CAA 72 bp | TGGTGGCTGCCAGCTGATGATTTTGTCAATGTCCTTTaGCTTCCGGAATTCCACATGCTTTCGGAGCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: WWLPADDFVNVL*LPEFHMLSEHG Trigger: GCCATGCTCCGAAAGCATGTGGAATTCCGGAAGCAAAAGGACATTGACAAAATCATCAGCTGGCAGCCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003681.8 |
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