Pregenerated sensors for SDSL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029596Ensembl transcript IDs: ENSMUST00000031594.13, ENSMUST00000052258.14, ENSMUST00000132916.2
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | AAGAGGGCAGGACCACTGGAACCGAGGTCCCTTGAGTaGCCCACCAAGGTGTCCAGGAACCTCTGGGGGAGT | + |
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Preference number: 3 (lower is better) Translates to: KRAGPLEPRSLE*PTKVSRNLWGS Trigger: ACTCCCCCAGAGGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCGGTTCCAGTGGTCCTGCCCTCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| 3UTR TCA 72 bp | AAGGAAGAGGGCAGGACCACTGGAACCGAGGTCCCTTaGGTGACCCACCAAGGTGTCCAGGAACCTCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: KEEGRTTGTEVP*VTHQGVQEPLG Trigger: CCCCAGAGGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCGGTTCCAGTGGTCCTGCCCTCTTCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| 3UTR CCA 72 bp | CAGGAGGGCTACCTGGAAGGAAGAGGGCAGGACCACTaGAACCGAGGTCCCTTGAGTGACCCACCAAGGTGT | + |
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Preference number: 3 (lower is better) Translates to: QEGYLEGRGQDH*NRGPLSDPPRC Trigger: ACACCTTGGTGGGTCACTCAAGGGACCTCGGTTCCAGTGGTCCTGCCCTCTTCCTTCCAGGTAGCCCTCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR GCA 90 bp | ACCCAGGAGGGCTACCTGGAAGGAAGAGGGCAGGACCACTGGAACCGAGGTCCCAGCCGCCTCACCACCTaGACGGAGGTGCCCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: TQEGYLEGRGQDHWNRGPSRLTT*TEVPSG Trigger: CCCAGAGGGCACCTCCGTGCAGGTGGTGAGGCGGCT...GGGACCTCGGTTCCAGTGGTCCTGCCCTCTTCCTTCCAGGTAGCCCTCCTGGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR CCA 90 bp | CCCAGGAGGGCTACCTGGAAGGAAGAGGGCAGGACCACTGGAACCGAGGTCCCTAGGCGGCCCTCAGCCTaGAGCCTCCACAGGATGCCC | + |
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Preference number: 4 (lower is better) Translates to: PRRATWKEEGRTTGTEVPRRPSA*SLHRMP Trigger: GGGCATCCTGTGGAGGCTCCAGGCTGAGGGCCGCCT...AGGGACCTCGGTTCCAGTGGTCCTGCCCTCTTCCTTCCAGGTAGCCCTCCTGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR GCA 90 bp | TGGAACCGAGGTCCCTTGAGTGACCCACCAAGGTGTCCAGGAACCTCTGGGGGAGCCAGCAGTCACACCTaGCAGGAGCCCTCCGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: WNRGPLSDPPRCPGTSGGASSHT*QEPSAP Trigger: GGGGGCGGAGGGCTCCTGGCAGGTGTGACTGCTGGC...TCCCCCAGAGGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCGGTTCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR GCA 90 bp | GAGGGCTACCTGGAAGGAAGAGGGCAGGACCACTGGAACCGAGGTCCCTTGAGTGCCAGCAGTCACACCTaGCAGGAGCCCTCCGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: EGYLEGRGQDHWNRGPLSASSHT*QEPSAP Trigger: GGGGGCGGAGGGCTCCTGGCAGGTGTGACTGCTGGC...ACTCAAGGGACCTCGGTTCCAGTGGTCCTGCCCTCTTCCTTCCAGGTAGCCCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR CCA 90 bp | CAGGACCACTGGAACCGAGGTCCCTTGAGTGACCCACCAAGGTGTCCAGGAACCGGATGCCCGAGTAGATaGCGGCCAGGGCGGCACCGC | + |
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Preference number: 4 (lower is better) Translates to: QDHWNRGPLSDPPRCPGTGCPSR*RPGRHR Trigger: GCGGTGCCGCCCTGGCCGCCATCTACTCGGGCATCC...GGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCGGTTCCAGTGGTCCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR GCA 90 bp | CAGGACCACTGGAACCGAGGTCCCTTGAGTGACCCACCAAGGTGTCCAGGAACCAGCCGCCTCACCACCTaGACGGAGGTGCCCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: QDHWNRGPLSDPPRCPGTSRLTT*TEVPSG Trigger: CCCAGAGGGCACCTCCGTGCAGGTGGTGAGGCGGCT...GGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCGGTTCCAGTGGTCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR GCA 90 bp | CCCAGGAGGGCTACCTGGAAGGAAGAGGGCAGGACCACTGGAACCGAGGTCCCTACGATGGGCACATGCTaGCAGCCCACCTCCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: PRRATWKEEGRTTGTEVPTMGTC*QPTSSR Trigger: CCTGCTGGAGGTGGGCTGGCAGCATGTGCCCATCGT...AGGGACCTCGGTTCCAGTGGTCCTGCCCTCTTCCTTCCAGGTAGCCCTCCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR CCA 90 bp | AACCGAGGTCCCTTGAGTGACCCACCAAGGTGTCCAGGAACCTCTGGGGGAGTTGGATGCCCGAGTAGATaGCGGCCAGGGCGGCACCGC | + |
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Preference number: 4 (lower is better) Translates to: NRGPLSDPPRCPGTSGGVGCPSR*RPGRHR Trigger: GCGGTGCCGCCCTGGCCGCCATCTACTCGGGCATCC...AACTCCCCCAGAGGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCGGTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR GCA 90 bp | TGGAACCGAGGTCCCTTGAGTGACCCACCAAGGTGTCCAGGAACCTCTGGGGGACCACCTGCACGGAGGTaGCCTCTGGGAGCACGATGG | + |
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Preference number: 4 (lower is better) Translates to: WNRGPLSDPPRCPGTSGGPPARR*PLGARW Trigger: CCATCGTGCTCCCAGAGGGCACCTCCGTGCAGGTGG...TCCCCCAGAGGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCGGTTCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR GCA 90 bp | GGCTACCTGGAAGGAAGAGGGCAGGACCACTGGAACCGAGGTCCCTTGAGTGACCCACCTGCACGGAGGTaGCCTCTGGGAGCACGATGG | + |
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Preference number: 4 (lower is better) Translates to: GYLEGRGQDHWNRGPLSDPPARR*PLGARW Trigger: CCATCGTGCTCCCAGAGGGCACCTCCGTGCAGGTGG...GTCACTCAAGGGACCTCGGTTCCAGTGGTCCTGCCCTCTTCCTTCCAGGTAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR GCA 90 bp | CAGGAGGGCTACCTGGAAGGAAGAGGGCAGGACCACTGGAACCGAGGTCCCTTGACGATGGGCACATGCTaGCAGCCCACCTCCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: QEGYLEGRGQDHWNRGPLTMGTC*QPTSSR Trigger: CCTGCTGGAGGTGGGCTGGCAGCATGTGCCCATCGT...CAAGGGACCTCGGTTCCAGTGGTCCTGCCCTCTTCCTTCCAGGTAGCCCTCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR GCA 90 bp | CCCAGGAGGGCTACCTGGAAGGAAGAGGGCAGGACCACTGGAACCGAGGTCCCTGGTGACCGGCCTGCCTaGCTGCAAGGCCGAATTGAA | + |
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Preference number: 4 (lower is better) Translates to: PRRATWKEEGRTTGTEVPGDRPA*LQGRIE Trigger: TTCAATTCGGCCTTGCAGGCAGGCAGGCCGGTCACC...AGGGACCTCGGTTCCAGTGGTCCTGCCCTCTTCCTTCCAGGTAGCCCTCCTGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR CCA 90 bp | CCCAGGAGGGCTACCTGGAAGGAAGAGGGCAGGACCACTGGAACCGAGGTCCCTGTGCAGCCACCGTCTTaGCTCCGAGGCTCTTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: PRRATWKEEGRTTGTEVPVQPPS*LRGSWL Trigger: TAGCCAAGAGCCTCGGAGCCAAGACGGTGGCTGCAC...AGGGACCTCGGTTCCAGTGGTCCTGCCCTCTTCCTTCCAGGTAGCCCTCCTGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR CCA 90 bp | AACCGAGGTCCCTTGAGTGACCCACCAAGGTGTCCAGGAACCTCTGGGGGAGTTAGGCGGCCCTCAGCCTaGAGCCTCCACAGGATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NRGPLSDPPRCPGTSGGVRRPSA*SLHRMP Trigger: GGGCATCCTGTGGAGGCTCCAGGCTGAGGGCCGCCT...AACTCCCCCAGAGGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCGGTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR TCA 90 bp | CACTGGAACCGAGGTCCCTTGAGTGACCCACCAAGGTGTCCAGGAACCTCTGGGGCCCGCATTGCCCCCTaGGGAGCACACCAGATGTCT | + |
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Preference number: 4 (lower is better) Translates to: HWNRGPLSDPPRCPGTSGARIAP*GAHQMS Trigger: AGACATCTGGTGTGCTCCTCAGGGGGCAATGCGGGC...CCCAGAGGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCGGTTCCAGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR TCA 90 bp | CAGGACCACTGGAACCGAGGTCCCTTGAGTGACCCACCAAGGTGTCCAGGAACCGCCCGCATTGCCCCCTaGGGAGCACACCAGATGTCT | + |
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Preference number: 4 (lower is better) Translates to: QDHWNRGPLSDPPRCPGTARIAP*GAHQMS Trigger: AGACATCTGGTGTGCTCCTCAGGGGGCAATGCGGGC...GGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCGGTTCCAGTGGTCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR GCA 90 bp | CGAGGTCCCTTGAGTGACCCACCAAGGTGTCCAGGAACCTCTGGGGGAGTTCCTGCAACGATGGGCACATaGTGCCAGCCCACCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGPLSDPPRCPGTSGGVPATMGT*CQPTSS Trigger: GCTGGAGGTGGGCTGGCAGCATGTGCCCATCGTTGC...AGGAACTCCCCCAGAGGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR GCA 90 bp | GGCTACCTGGAAGGAAGAGGGCAGGACCACTGGAACCGAGGTCCCTTGAGTGACGCAACGATGGGCACATaGTGCCAGCCCACCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GYLEGRGQDHWNRGPLSDATMGT*CQPTSS Trigger: GCTGGAGGTGGGCTGGCAGCATGTGCCCATCGTTGC...GTCACTCAAGGGACCTCGGTTCCAGTGGTCCTGCCCTCTTCCTTCCAGGTAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR GCA 90 bp | GGAGGGCTACCTGGAAGGAAGAGGGCAGGACCACTGGAACCGAGGTCCCTTGAGGGTGACCGGCCTGCCTaGCTGCAAGGCCGAATTGAA | + |
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Preference number: 4 (lower is better) Translates to: GGLPGRKRAGPLEPRSLEGDRPA*LQGRIE Trigger: TTCAATTCGGCCTTGCAGGCAGGCAGGCCGGTCACC...CTCAAGGGACCTCGGTTCCAGTGGTCCTGCCCTCTTCCTTCCAGGTAGCCCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR GCA 90 bp | TGGAACCGAGGTCCCTTGAGTGACCCACCAAGGTGTCCAGGAACCTCTGGGGGAGGAGCCTCCACAGGATaGCCGAGTAGATGGCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: WNRGPLSDPPRCPGTSGGGASTG*PSRWRP Trigger: TGGCCGCCATCTACTCGGGCATCCTGTGGAGGCTCC...TCCCCCAGAGGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCGGTTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR GCA 90 bp | GAGGGCTACCTGGAAGGAAGAGGGCAGGACCACTGGAACCGAGGTCCCTTGAGTGGAGCCTCCACAGGATaGCCGAGTAGATGGCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: EGYLEGRGQDHWNRGPLSGASTG*PSRWRP Trigger: TGGCCGCCATCTACTCGGGCATCCTGTGGAGGCTCC...ACTCAAGGGACCTCGGTTCCAGTGGTCCTGCCCTCTTCCTTCCAGGTAGCCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR CCA 90 bp | CCCAGGAGGGCTACCTGGAAGGAAGAGGGCAGGACCACTGGAACCGAGGTCCCTTCTCCATGGCAACGATaGGCACATGCTGCCAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: PRRATWKEEGRTTGTEVPSPWQR*AHAASP Trigger: TGGGCTGGCAGCATGTGCCCATCGTTGCCATGGAGA...AGGGACCTCGGTTCCAGTGGTCCTGCCCTCTTCCTTCCAGGTAGCCCTCCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR GCA 90 bp | ACCCAGGAGGGCTACCTGGAAGGAAGAGGGCAGGACCACTGGAACCGAGGTCCCCCCCTCTTGGCCATCTaGTGGCAGAAATGTCCGATG | + |
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Preference number: 4 (lower is better) Translates to: TQEGYLEGRGQDHWNRGPPLLAI*WQKCPM Trigger: CATCGGACATTTCTGCCAGCAGATGGCCAAGAGGGG...GGGACCTCGGTTCCAGTGGTCCTGCCCTCTTCCTTCCAGGTAGCCCTCCTGGGT 61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR GCA 90 bp | CGAGGTCCCTTGAGTGACCCACCAAGGTGTCCAGGAACCTCTGGGGGAGTTCCTGCCGAATTGAAACTGTaGGCCCCGCGGGTCTCCATG | + |
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Preference number: 4 (lower is better) Translates to: RGPLSDPPRCPGTSGGVPAELKL*APRVSM Trigger: CATGGAGACCCGCGGGGCGCACAGTTTCAATTCGGC...AGGAACTCCCCCAGAGGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR GCA 90 bp | GAGGGCTACCTGGAAGGAAGAGGGCAGGACCACTGGAACCGAGGTCCCTTGAGTGCCGAATTGAAACTGTaGGCCCCGCGGGTCTCCATG | + |
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Preference number: 4 (lower is better) Translates to: EGYLEGRGQDHWNRGPLSAELKL*APRVSM Trigger: CATGGAGACCCGCGGGGCGCACAGTTTCAATTCGGC...ACTCAAGGGACCTCGGTTCCAGTGGTCCTGCCCTCTTCCTTCCAGGTAGCCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR GCA 90 bp | CCCAGGAGGGCTACCTGGAAGGAAGAGGGCAGGACCACTGGAACCGAGGTCCCTGACCTCACACTCCTTTaGACACTCCAAGGTCCGTGC | + |
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Preference number: 4 (lower is better) Translates to: PRRATWKEEGRTTGTEVPDLTLL*TLQGPC Trigger: GCACGGACCTTGGAGTGTGCAAAGGAGTGTGAGGTC...AGGGACCTCGGTTCCAGTGGTCCTGCCCTCTTCCTTCCAGGTAGCCCTCCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR CCA 90 bp | AACCGAGGTCCCTTGAGTGACCCACCAAGGTGTCCAGGAACCTCTGGGGGAGTTACTTTCCCAGTCAGCTaGACCTCGGCCCCTTCCCCC | + |
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Preference number: 4 (lower is better) Translates to: NRGPLSDPPRCPGTSGGVTFPVS*TSAPSP Trigger: GGGGGAAGGGGCCGAGGTCCAGCTGACTGGGAAAGT...AACTCCCCCAGAGGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCGGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR CCA 90 bp | TGGAACCGAGGTCCCTTGAGTGACCCACCAAGGTGTCCAGGAACCTCTGGGGGATACACTGGTGATGTCTaGCAGGGTGACCGGCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: WNRGPLSDPPRCPGTSGGYTGDV*QGDRPA Trigger: GGCAGGCCGGTCACCCTGCCAGACATCACCAGTGTA...TCCCCCAGAGGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCGGTTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR CCA 90 bp | GAGGGCTACCTGGAAGGAAGAGGGCAGGACCACTGGAACCGAGGTCCCTTGAGTGTGCAGCCACCGTCTTaGCTCCGAGGCTCTTGGCTA | + |
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Preference number: 4 (lower is better) Translates to: EGYLEGRGQDHWNRGPLSVQPPS*LRGSWL Trigger: TAGCCAAGAGCCTCGGAGCCAAGACGGTGGCTGCAC...ACTCAAGGGACCTCGGTTCCAGTGGTCCTGCCCTCTTCCTTCCAGGTAGCCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| 3UTR CAA 72 bp | GAAGGAAGAGGGCAGGACCACTGGAACCGAGGTCCCTaGAGTGACCCACCAAGGTGTCCAGGAACCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: EGRGQDHWNRGP*SDPPRCPGTSG Trigger: CCCAGAGGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCGGTTCCAGTGGTCCTGCCCTCTTCCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR GCA 90 bp | GGAGGGCTACCTGGAAGGAAGAGGGCAGGACCACTGGAACCGAGGTCCCTTGAGGACCTCACACTCCTTTaGACACTCCAAGGTCCGTGC | + |
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Preference number: 4 (lower is better) Translates to: GGLPGRKRAGPLEPRSLEDLTLL*TLQGPC Trigger: GCACGGACCTTGGAGTGTGCAAAGGAGTGTGAGGTC...CTCAAGGGACCTCGGTTCCAGTGGTCCTGCCCTCTTCCTTCCAGGTAGCCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR GCA 90 bp | CGAGGTCCCTTGAGTGACCCACCAAGGTGTCCAGGAACCTCTGGGGGAGTTCCTCAGGTTCCACCAGCATaGGCTCATCGTCCAGGAACC | + |
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Preference number: 4 (lower is better) Translates to: RGPLSDPPRCPGTSGGVPQVPPA*AHRPGT Trigger: GGTTCCTGGACGATGAGCGCATGCTGGTGGAACCTG...AGGAACTCCCCCAGAGGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR GCA 90 bp | TGGAACCGAGGTCCCTTGAGTGACCCACCAAGGTGTCCAGGAACCTCTGGGGGACAGGTTCCACCAGCATaGGCTCATCGTCCAGGAACC | + |
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Preference number: 4 (lower is better) Translates to: WNRGPLSDPPRCPGTSGGQVPPA*AHRPGT Trigger: GGTTCCTGGACGATGAGCGCATGCTGGTGGAACCTG...TCCCCCAGAGGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCGGTTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR CCA 90 bp | TGGAACCGAGGTCCCTTGAGTGACCCACCAAGGTGTCCAGGAACCTCTGGGGGATCTCCATGGCAACGATaGGCACATGCTGCCAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: WNRGPLSDPPRCPGTSGGSPWQR*AHAASP Trigger: TGGGCTGGCAGCATGTGCCCATCGTTGCCATGGAGA...TCCCCCAGAGGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCGGTTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR CCA 90 bp | AACCGAGGTCCCTTGAGTGACCCACCAAGGTGTCCAGGAACCTCTGGGGGAGTTTACACTGGTGATGTCTaGCAGGGTGACCGGCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: NRGPLSDPPRCPGTSGGVYTGDV*QGDRPA Trigger: GGCAGGCCGGTCACCCTGCCAGACATCACCAGTGTA...AACTCCCCCAGAGGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR GCA 90 bp | CGAGGTCCCTTGAGTGACCCACCAAGGTGTCCAGGAACCTCTGGGGGAGTTCCTCCCCTCTTGGCCATCTaGTGGCAGAAATGTCCGATG | + |
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Preference number: 4 (lower is better) Translates to: RGPLSDPPRCPGTSGGVPPLLAI*WQKCPM Trigger: CATCGGACATTTCTGCCAGCAGATGGCCAAGAGGGG...AGGAACTCCCCCAGAGGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR CCA 90 bp | CAGGAGGGCTACCTGGAAGGAAGAGGGCAGGACCACTGGAACCGAGGTCCCTTGGTCTGCATCCCCTCTTaGCCATCTGCTGGCAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: QEGYLEGRGQDHWNRGPLVCIPS*PSAGRN Trigger: ATTTCTGCCAGCAGATGGCCAAGAGGGGATGCAGAC...CAAGGGACCTCGGTTCCAGTGGTCCTGCCCTCTTCCTTCCAGGTAGCCCTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR CCA 90 bp | CGAGGTCCCTTGAGTGACCCACCAAGGTGTCCAGGAACCTCTGGGGGAGTTCCTCGCACTAGGCTGGCATaGCCTTCCCATATAAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: RGPLSDPPRCPGTSGGVPRTRLA*PSHIRG Trigger: TCCCCTTATATGGGAAGGCCATGCCAGCCTAGTGCG...AGGAACTCCCCCAGAGGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR CCA 90 bp | TGGAACCGAGGTCCCTTGAGTGACCCACCAAGGTGTCCAGGAACCTCTGGGGGACGCACTAGGCTGGCATaGCCTTCCCATATAAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: WNRGPLSDPPRCPGTSGGRTRLA*PSHIRG Trigger: TCCCCTTATATGGGAAGGCCATGCCAGCCTAGTGCG...TCCCCCAGAGGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCGGTTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR GCA 90 bp | TGGAACCGAGGTCCCTTGAGTGACCCACCAAGGTGTCCAGGAACCTCTGGGGGAAGCACACCAGATGTCTaGATCCCCTCTTGGCCATCT | + |
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Preference number: 4 (lower is better) Translates to: WNRGPLSDPPRCPGTSGGSTPDV*IPSWPS Trigger: AGATGGCCAAGAGGGGATGCAGACATCTGGTGTGCT...TCCCCCAGAGGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCGGTTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR CCA 90 bp | CAGGACCACTGGAACCGAGGTCCCTTGAGTGACCCACCAAGGTGTCCAGGAACCGTCTGCATCCCCTCTTaGCCATCTGCTGGCAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QDHWNRGPLSDPPRCPGTVCIPS*PSAGRN Trigger: ATTTCTGCCAGCAGATGGCCAAGAGGGGATGCAGAC...GGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCGGTTCCAGTGGTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR CCA 90 bp | CAGGAGGGCTACCTGGAAGGAAGAGGGCAGGACCACTGGAACCGAGGTCCCTTGTCCCATATAAGGGGATaGTCAAACGGGGAGACGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QEGYLEGRGQDHWNRGPLSHIRG*SNGETF Trigger: GAACGTCTCCCCGTTTGACCATCCCCTTATATGGGA...CAAGGGACCTCGGTTCCAGTGGTCCTGCCCTCTTCCTTCCAGGTAGCCCTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR CCA 90 bp | CACTGGAACCGAGGTCCCTTGAGTGACCCACCAAGGTGTCCAGGAACCTCTGGGTCCCATATAAGGGGATaGTCAAACGGGGAGACGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HWNRGPLSDPPRCPGTSGSHIRG*SNGETF Trigger: GAACGTCTCCCCGTTTGACCATCCCCTTATATGGGA...CCCAGAGGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCGGTTCCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR TCA 90 bp | GACCACTGGAACCGAGGTCCCTTGAGTGACCCACCAAGGTGTCCAGGAACCTCTGCACATTCTCATATTTaGGGAAGACCGGCATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DHWNRGPLSDPPRCPGTSAHSHI*GRPACL Trigger: CAGGCATGCCGGTCTTCCTCAAATATGAGAATGTGC...AGAGGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCGGTTCCAGTGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR TCA 90 bp | CACTGGAACCGAGGTCCCTTGAGTGACCCACCAAGGTGTCCAGGAACCTCTGGGTGGATTTTCAGCTCCTaGAGCTGTTGGCTACTAATG | + |
|
Preference number: 4 (lower is better) Translates to: HWNRGPLSDPPRCPGTSGWIFSS*SCWLLM Trigger: CATTAGTAGCCAACAGCTTCAGGAGCTGAAAATCCA...CCCAGAGGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCGGTTCCAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR TCA 90 bp | CCACACGCTCAGCTCAGTCAGGTTTATTCACTGGACAGCAGGGAGCCACTGAGAGCACATTCTCATATTTaGGGAAGACCGGCATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PHAQLSQVYSLDSREPLRAHSHI*GRPACL Trigger: CAGGCATGCCGGTCTTCCTCAAATATGAGAATGTGC...TCTCAGTGGCTCCCTGCTGTCCAGTGAATAAACCTGACTGAGCTGAGCGTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052258.14 |
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| CDS-3UTR GCA 90 bp | TGGAACCGAGGTCCCTTGAGTGACCCACCAAGGTGTCCAGGAACCTCTGGGGGAAAGGAGCCAGCTATCTaGACATTCTCATATTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WNRGPLSDPPRCPGTSGGKEPAI*TFSYLR Trigger: CCTCAAATATGAGAATGTGCAGATAGCTGGCTCCTT...TCCCCCAGAGGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCGGTTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR GCA 90 bp | CACTGGAACCGAGGTCCCTTGAGTGACCCACCAAGGTGTCCAGGAACCTCTGGGAAGGAGCCAGCTATCTaGACATTCTCATATTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HWNRGPLSDPPRCPGTSGKEPAI*TFSYLR Trigger: CCTCAAATATGAGAATGTGCAGATAGCTGGCTCCTT...CCCAGAGGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCGGTTCCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR GCA 90 bp | CACTGGAACCGAGGTCCCTTGAGTGACCCACCAAGGTGTCCAGGAACCTCTGGGTGTGGCCAGTTCTTGTaGTTTTACATTGGCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: HWNRGPLSDPPRCPGTSGCGQFL*FYIGFI Trigger: GATGAAGCCAATGTAAAAGCACAAGAACTGGCCACA...CCCAGAGGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCGGTTCCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR GCA 90 bp | TGGAACCGAGGTCCCTTGAGTGACCCACCAAGGTGTCCAGGAACCTCTGGGGGATGTGGCCAGTTCTTGTaGTTTTACATTGGCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: WNRGPLSDPPRCPGTSGGCGQFL*FYIGFI Trigger: GATGAAGCCAATGTAAAAGCACAAGAACTGGCCACA...TCCCCCAGAGGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCGGTTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS CCA 90 bp | CCCTTCCCCCTCGAGCCGCCTCACCACCTGCACGGAGGTGCCCTCTaGGAGCACGATGGTGACGGGGATGCCCAGCTTACGAGCCGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: PFPLEPPHHLHGGAL*EHDGDGDAQLTSRV Trigger: TACTCGGCTCGTAAGCTGGGCATCCCCGTCACCATCGTGCTCCCAGAGGGCACCTCCGTGCAGGTGGTGAGGCGGCTCGAGGGGGAAGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 ENSMUST00000132916.2 |
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| CDS-3UTR CAA 90 bp | CCCAGGAGGGCTACCTGGAAGGAAGAGGGCAGGACCACTGGAACCGAGGTCCCTGCCTGCAAGGCCGAATaGAAACTGTGCGCCCCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PRRATWKEEGRTTGTEVPACKAE*KLCAPR Trigger: CCGCGGGGCGCACAGTTTCAATTCGGCCTTGCAGGC...AGGGACCTCGGTTCCAGTGGTCCTGCCCTCTTCCTTCCAGGTAGCCCTCCTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR CAA 90 bp | ACCCAGGAGGGCTACCTGGAAGGAAGAGGGCAGGACCACTGGAACCGAGGTCCCGCCTGCAAGGCCGAATaGAAACTGTGCGCCCCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TQEGYLEGRGQDHWNRGPACKAE*KLCAPR Trigger: CCGCGGGGCGCACAGTTTCAATTCGGCCTTGCAGGC...GGGACCTCGGTTCCAGTGGTCCTGCCCTCTTCCTTCCAGGTAGCCCTCCTGGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS GCA 90 bp | CCGCAGGCAGGTTCCACCAGCATGCGCTCATCGTCCAGGAACCTCTaGACAGCGCTGACAGCCTCCCGGTCTTCTACCACCTCAGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PQAGSTSMRSSSRNL*TALTASRSSTTSER Trigger: CCTCTCTGAGGTGGTAGAAGACCGGGAGGCTGTCAGCGCTGTGCAGAGGTTCCTGGACGATGAGCGCATGCTGGTGGAACCTGCCTGCGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR CAA 90 bp | GGCTACCTGGAAGGAAGAGGGCAGGACCACTGGAACCGAGGTCCCTTGAGTGACCGTGCAGCCACCGTCTaGGCTCCGAGGCTCTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GYLEGRGQDHWNRGPLSDRAATV*APRLLA Trigger: AGCCAAGAGCCTCGGAGCCAAGACGGTGGCTGCACG...GTCACTCAAGGGACCTCGGTTCCAGTGGTCCTGCCCTCTTCCTTCCAGGTAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS GCA 90 bp | AGCCTCCCGGTCTTCTACCACCTCAGAGAGGACCTCACACTCCTTTaGACACTCCAAGGTCCGTGCAGCCACCGTCTTGGCTCCGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLPVFYHLREDLTLL*TLQGPCSHRLGSEA Trigger: AGCCTCGGAGCCAAGACGGTGGCTGCACGGACCTTGGAGTGTGCAAAGGAGTGTGAGGTCCTCTCTGAGGTGGTAGAAGACCGGGAGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR CAA 90 bp | ACCCAGGAGGGCTACCTGGAAGGAAGAGGGCAGGACCACTGGAACCGAGGTCCCTGTCTGCATCCCCTCTaGGCCATCTGCTGGCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: TQEGYLEGRGQDHWNRGPCLHPL*AICWQK Trigger: TTTCTGCCAGCAGATGGCCAAGAGGGGATGCAGACA...GGGACCTCGGTTCCAGTGGTCCTGCCCTCTTCCTTCCAGGTAGCCCTCCTGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR CAA 90 bp | CAGGAGGGCTACCTGGAAGGAAGAGGGCAGGACCACTGGAACCGAGGTCCCTTGGGACCTCACACTCCTTaGCACACTCCAAGGTCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: QEGYLEGRGQDHWNRGPLGPHTP*HTPRSV Trigger: CACGGACCTTGGAGTGTGCAAAGGAGTGTGAGGTCC...CAAGGGACCTCGGTTCCAGTGGTCCTGCCCTCTTCCTTCCAGGTAGCCCTCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS TCA 90 bp | GTTCCACCAGCATGCGCTCATCGTCCAGGAACCTCTGCACAGCGCTaGCAGCCTCCCGGTCTTCTACCACCTCAGAGAGGACCTCACACT | + |
|
Preference number: 5 (lower is better) Translates to: VPPACAHRPGTSAQR*QPPGLLPPQRGPHT Trigger: AGTGTGAGGTCCTCTCTGAGGTGGTAGAAGACCGGGAGGCTGTCAGCGCTGTGCAGAGGTTCCTGGACGATGAGCGCATGCTGGTGGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR CAA 90 bp | CCACACGCTCAGCTCAGTCAGGTTTATTCACTGGACAGCAGGGAGCCACTGAGACGTGCAGCCACCGTCTaGGCTCCGAGGCTCTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PHAQLSQVYSLDSREPLRRAATV*APRLLA Trigger: AGCCAAGAGCCTCGGAGCCAAGACGGTGGCTGCACG...TCTCAGTGGCTCCCTGCTGTCCAGTGAATAAACCTGACTGAGCTGAGCGTGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052258.14 |
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| CDS-3UTR CAA 90 bp | TGGAACCGAGGTCCCTTGAGTGACCCACCAAGGTGTCCAGGAACCTCTGGGGGAGGACCTCACACTCCTTaGCACACTCCAAGGTCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: WNRGPLSDPPRCPGTSGGGPHTP*HTPRSV Trigger: CACGGACCTTGGAGTGTGCAAAGGAGTGTGAGGTCC...TCCCCCAGAGGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCGGTTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS GCA 90 bp | CACCTCAGAGAGGACCTCACACTCCTTTGCACACTCCAAGGTCCGTaGAGCCACCGTCTTGGCTCCGAGGCTCTTGGCTACACTGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: HLREDLTLLCTLQGP*SHRLGSEALGYTGD Trigger: ATCACCAGTGTAGCCAAGAGCCTCGGAGCCAAGACGGTGGCTGCACGGACCTTGGAGTGTGCAAAGGAGTGTGAGGTCCTCTCTGAGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS CCA 90 bp | TTCAGCTCCCGCACTAGGCTGGCATGGCCTTCCCATATAAGGGGATaGTCAAACGGGGAGACGTTCACCCAGCCATCCCTTGTGGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FSSRTRLAWPSHIRG*SNGETFTQPSLVAS Trigger: ACTGGCCACAAGGGATGGCTGGGTGAACGTCTCCCCGTTTGACCATCCCCTTATATGGGAAGGCCATGCCAGCCTAGTGCGGGAGCTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR CAA 90 bp | GGCTACCTGGAAGGAAGAGGGCAGGACCACTGGAACCGAGGTCCCTTGAGTGACTGTCTGCATCCCCTCTaGGCCATCTGCTGGCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GYLEGRGQDHWNRGPLSDCLHPL*AICWQK Trigger: TTTCTGCCAGCAGATGGCCAAGAGGGGATGCAGACA...GTCACTCAAGGGACCTCGGTTCCAGTGGTCCTGCCCTCTTCCTTCCAGGTAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR CAA 90 bp | AACCGAGGTCCCTTGAGTGACCCACCAAGGTGTCCAGGAACCTCTGGGGGAGTTTCACCCAGCCATCCCTaGTGGCCAGTTCTTGTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: NRGPLSDPPRCPGTSGGVSPSHP*WPVLVL Trigger: AAGCACAAGAACTGGCCACAAGGGATGGCTGGGTGA...AACTCCCCCAGAGGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR CAA 90 bp | CAGGAGGGCTACCTGGAAGGAAGAGGGCAGGACCACTGGAACCGAGGTCCCTTGCAGCTCCTGAAGCTGTaGGCTACTAATGTTGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QEGYLEGRGQDHWNRGPLQLLKL*ATNVVA Trigger: GGCAACAACATTAGTAGCCAACAGCTTCAGGAGCTG...CAAGGGACCTCGGTTCCAGTGGTCCTGCCCTCTTCCTTCCAGGTAGCCCTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR CAA 90 bp | CGAGGTCCCTTGAGTGACCCACCAAGGTGTCCAGGAACCTCTGGGGGAGTTCCTCAGCTCCTGAAGCTGTaGGCTACTAATGTTGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RGPLSDPPRCPGTSGGVPQLLKL*ATNVVA Trigger: GGCAACAACATTAGTAGCCAACAGCTTCAGGAGCTG...AGGAACTCCCCCAGAGGTTCCTGGACACCTTGGTGGGTCACTCAAGGGACCTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS CCA 90 bp | CGTTCACCCAGCCATCCCTTGTGGCCAGTTCTTGTGCTTTTACATTaGCTTCATCCCAGACTTTCCCAGTCAGCTGGACCTCGGCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RSPSHPLWPVLVLLH*LHPRLSQSAGPRPL Trigger: AAGGGGCCGAGGTCCAGCTGACTGGGAAAGTCTGGGATGAAGCCAATGTAAAAGCACAAGAACTGGCCACAAGGGATGGCTGGGTGAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR CAA 90 bp | GAGGGCTACCTGGAAGGAAGAGGGCAGGACCACTGGAACCGAGGTCCCTTGAGTTGCACATTCTCATATTaGAGGAAGACCGGCATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: EGYLEGRGQDHWNRGPLSCTFSY*RKTGMP Trigger: AGGCATGCCGGTCTTCCTCAAATATGAGAATGTGCA...ACTCAAGGGACCTCGGTTCCAGTGGTCCTGCCCTCTTCCTTCCAGGTAGCCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS GCA 90 bp | AAACGGGGAGACGTTCACCCAGCCATCCCTTGTGGCCAGTTCTTGTaGTTTTACATTGGCTTCATCCCAGACTTTCCCAGTCAGCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: KRGDVHPAIPCGQFL*FYIGFIPDFPSQLD Trigger: GTCCAGCTGACTGGGAAAGTCTGGGATGAAGCCAATGTAAAAGCACAAGAACTGGCCACAAGGGATGGCTGGGTGAACGTCTCCCCGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS-3UTR CAA 90 bp | CCACACGCTCAGCTCAGTCAGGTTTATTCACTGGACAGCAGGGAGCCACTGAGATGCACATTCTCATATTaGAGGAAGACCGGCATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PHAQLSQVYSLDSREPLRCTFSY*RKTGMP Trigger: AGGCATGCCGGTCTTCCTCAAATATGAGAATGTGCA...TCTCAGTGGCTCCCTGCTGTCCAGTGAATAAACCTGACTGAGCTGAGCGTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052258.14 |
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| CDS GCA 72 bp | ACCTCGGCCCCTTCCCCCTCGAGCCGCCTCACCACCTaGACGGAGGTGCCCTCTGGGAGCACGATGGTGACG | + |
|
Preference number: 6 (lower is better) Translates to: TSAPSPSSRLTT*TEVPSGSTMVT Trigger: CGTCACCATCGTGCTCCCAGAGGGCACCTCCGTGCAGGTGGTGAGGCGGCTCGAGGGGGAAGGGGCCGAGGT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 ENSMUST00000132916.2 |
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| CDS CCA 72 bp | GACAGCGCCCAGCTCTCCAGCAGGGGCGTGACCCTGTaGAAAGGCTCCGCCCCGACGCGTTCTGCCAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: DSAQLSSRGVTL*KGSAPTRSAKA Trigger: GGCCTTGGCAGAACGCGTCGGGGCGGAGCCTTTCCACAGGGTCACGCCCCTGCTGGAGAGCTGGGCGCTGTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 ENSMUST00000132916.2 |
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| CDS GCA 72 bp | CTGGTGATGTCTGGCAGGGTGACCGGCCTGCCTGCCTaGAAGGCCGAATTGAAACTGTGCGCCCCGCGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LVMSGRVTGLPA*KAELKLCAPRV Trigger: GACCCGCGGGGCGCACAGTTTCAATTCGGCCTTGCAGGCAGGCAGGCCGGTCACCCTGCCAGACATCACCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS GCA 72 bp | TACACTGGTGATGTCTGGCAGGGTGACCGGCCTGCCTaGCTGCAAGGCCGAATTGAAACTGTGCGCCCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: YTGDVWQGDRPA*LQGRIETVRPA Trigger: CGCGGGGCGCACAGTTTCAATTCGGCCTTGCAGGCAGGCAGGCCGGTCACCCTGCCAGACATCACCAGTGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS CAA 72 bp | AAGGTCCGTGCAGCCACCGTCTTGGCTCCGAGGCTCTaGGCTACACTGGTGATGTCTGGCAGGGTGACCGGC | + |
|
Preference number: 6 (lower is better) Translates to: KVRAATVLAPRL*ATLVMSGRVTG Trigger: GCCGGTCACCCTGCCAGACATCACCAGTGTAGCCAAGAGCCTCGGAGCCAAGACGGTGGCTGCACGGACCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS GCA 72 bp | GGATGCCCAGCTTACGAGCCGAGTATGCAGCCGCAATaGCCGCATTGCCCCCTGAGGAGCACACCAGATGTC | + |
|
Preference number: 6 (lower is better) Translates to: GCPAYEPSMQPQ*PHCPLRSTPDV Trigger: GACATCTGGTGTGCTCCTCAGGGGGCAATGCGGGCATTGCGGCTGCATACTCGGCTCGTAAGCTGGGCATCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 ENSMUST00000132916.2 |
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| CDS TCA 72 bp | GCATGCGCTCATCGTCCAGGAACCTCTGCACAGCGCTaGCAGCCTCCCGGTCTTCTACCACCTCAGAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: ACAHRPGTSAQR*QPPGLLPPQRG Trigger: TCCTCTCTGAGGTGGTAGAAGACCGGGAGGCTGTCAGCGCTGTGCAGAGGTTCCTGGACGATGAGCGCATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS GCA 72 bp | GAGGACCTCACACTCCTTTGCACACTCCAAGGTCCGTaGAGCCACCGTCTTGGCTCCGAGGCTCTTGGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: EDLTLLCTLQGP*SHRLGSEALGY Trigger: GTAGCCAAGAGCCTCGGAGCCAAGACGGTGGCTGCACGGACCTTGGAGTGTGCAAAGGAGTGTGAGGTCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS CAA 72 bp | AGCTTACGAGCCGAGTATGCAGCCGCAATGCCCGCATaGCCCCCTGAGGAGCACACCAGATGTCTGCATCCC | + |
|
Preference number: 6 (lower is better) Translates to: SLRAEYAAAMPA*PPEEHTRCLHP Trigger: GGGATGCAGACATCTGGTGTGCTCCTCAGGGGGCAATGCGGGCATTGCGGCTGCATACTCGGCTCGTAAGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 ENSMUST00000132916.2 |
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| CDS GCA 72 bp | TGCCCGCATTGCCCCCTGAGGAGCACACCAGATGTCTaGATCCCCTCTTGGCCATCTGCTGGCAGAAATGTC | + |
|
Preference number: 6 (lower is better) Translates to: CPHCPLRSTPDV*IPSWPSAGRNV Trigger: GACATTTCTGCCAGCAGATGGCCAAGAGGGGATGCAGACATCTGGTGTGCTCCTCAGGGGGCAATGCGGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 ENSMUST00000132916.2 |
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| CDS CCA 72 bp | CGCACTAGGCTGGCATGGCCTTCCCATATAAGGGGATaGTCAAACGGGGAGACGTTCACCCAGCCATCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: RTRLAWPSHIRG*SNGETFTQPSL Trigger: AAGGGATGGCTGGGTGAACGTCTCCCCGTTTGACCATCCCCTTATATGGGAAGGCCATGCCAGCCTAGTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS CAA 90 bp | ACGTTCACCCAGCCATCCCTTGTGGCCAGTTCTTGTGCTTTTACATaGGCTTCATCCCAGACTTTCCCAGTCAGCTGGACCTCGGCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: TFTQPSLVASSCAFT*ASSQTFPVSWTSAP Trigger: AGGGGCCGAGGTCCAGCTGACTGGGAAAGTCTGGGATGAAGCCAATGTAAAAGCACAAGAACTGGCCACAAGGGATGGCTGGGTGAACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
||
| CDS CCA 72 bp | GGTCAAACGGGGAGACGTTCACCCAGCCATCCCTTGTaGCCAGTTCTTGTGCTTTTACATTGGCTTCATCCC | + |
|
Preference number: 6 (lower is better) Translates to: GQTGRRSPSHPL*PVLVLLHWLHP Trigger: GGGATGAAGCCAATGTAAAAGCACAAGAACTGGCCACAAGGGATGGCTGGGTGAACGTCTCCCCGTTTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
||
| CDS CAA 72 bp | GCTGCAGCCCAGCTGGATTTTCAGCTCCTGAAGCTGTaGGCTACTAATGTTGTTGCCACCGCACACGATGAC | + |
|
Preference number: 6 (lower is better) Translates to: AAAQLDFQLLKL*ATNVVATAHDD Trigger: GTCATCGTGTGCGGTGGCAACAACATTAGTAGCCAACAGCTTCAGGAGCTGAAAATCCAGCTGGGCTGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
||
| CDS CAA 90 bp | GTCAAACGGGGAGACGTTCACCCAGCCATCCCTTGTGGCCAGTTCTaGTGCTTTTACATTGGCTTCATCCCAGACTTTCCCAGTCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: VKRGDVHPAIPCGQF*CFYIGFIPDFPSQL Trigger: CAGCTGACTGGGAAAGTCTGGGATGAAGCCAATGTAAAAGCACAAGAACTGGCCACAAGGGATGGCTGGGTGAACGTCTCCCCGTTTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS CAA 72 bp | CAGCCATCCCTTGTGGCCAGTTCTTGTGCTTTTACATaGGCTTCATCCCAGACTTTCCCAGTCAGCTGGACC | + |
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Preference number: 6 (lower is better) Translates to: QPSLVASSCAFT*ASSQTFPVSWT Trigger: GGTCCAGCTGACTGGGAAAGTCTGGGATGAAGCCAATGTAAAAGCACAAGAACTGGCCACAAGGGATGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS GCA 72 bp | GACGTTCACCCAGCCATCCCTTGTGGCCAGTTCTTGTaGTTTTACATTGGCTTCATCCCAGACTTTCCCAGT | + |
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Preference number: 6 (lower is better) Translates to: DVHPAIPCGQFL*FYIGFIPDFPS Trigger: ACTGGGAAAGTCTGGGATGAAGCCAATGTAAAAGCACAAGAACTGGCCACAAGGGATGGCTGGGTGAACGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS CCA 72 bp | AGCCATCCCTTGTGGCCAGTTCTTGTGCTTTTACATTaGCTTCATCCCAGACTTTCCCAGTCAGCTGGACCT | + |
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Preference number: 6 (lower is better) Translates to: SHPLWPVLVLLH*LHPRLSQSAGP Trigger: AGGTCCAGCTGACTGGGAAAGTCTGGGATGAAGCCAATGTAAAAGCACAAGAACTGGCCACAAGGGATGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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| CDS CAA 72 bp | GATGGTCAAACGGGGAGACGTTCACCCAGCCATCCCTaGTGGCCAGTTCTTGTGCTTTTACATTGGCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: DGQTGRRSPSHP*WPVLVLLHWLH Trigger: ATGAAGCCAATGTAAAAGCACAAGAACTGGCCACAAGGGATGGCTGGGTGAACGTCTCCCCGTTTGACCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031594.13 ENSMUST00000052258.14 |
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