Pregenerated sensors for SDS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029597Ensembl transcript IDs: ENSMUST00000066540.14, ENSMUST00000111898.2, ENSMUST00000201684.4
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | ATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATCCCACCCCACAATGCCTCGGATCTTaGAGGAGCCTGAGGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: IINTGKGGWGHCQVYPTPQCLGS*RSLRAG Trigger: CCCAGCCCTCAGGCTCCTTCAAGATCCGAGGCATTG...TGGGGTGGGATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR GCA 90 bp | CACATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATCCCACCAGTGGGGTCTTCACATaGAGGGACTCCTGGGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: HIINTGKGGWGHCQVYPTSGVFT*RDSWAA Trigger: GGCTGCCCAGGAGTCCCTGCATGTGAAGACCCCACT...GGTGGGATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR GCA 90 bp | ATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATCCCACCCCACTACTTCATCCTGCAGCCTaGACACCACGCGGCTGTACA | + |
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Preference number: 4 (lower is better) Translates to: INTGKGGWGHCQVYPTPLLHPAA*TPRGCT Trigger: TGTACAGCCGCGTGGTGTGCAGGCTGCAGGATGAAG...TAGTGGGGTGGGATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR CCA 90 bp | CACATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATCCCACCCACAACGATAGTGGCTaGGATGCCCAGCCTCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: HIINTGKGGWGHCQVYPTHNDSG*DAQPPG Trigger: GCCAGGAGGCTGGGCATCCCAGCCACTATCGTTGTG...GGTGGGATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR CCA 90 bp | ATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATCCCACCCCACTAGCAGACACAGCCTCCTaGTCTGAGATGACCTCGGAG | + |
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Preference number: 4 (lower is better) Translates to: INTGKGGWGHCQVYPTPLADTAS*SEMTSE Trigger: CTCCGAGGTCATCTCAGACCAGGAGGCTGTGTCTGC...TAGTGGGGTGGGATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR TCA 90 bp | ATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATCCCACCCCAGATCTTGAAGGAGCCTaGGGGCTGGGAGCTGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: IINTGKGGWGHCQVYPTPDLEGA*GLGAVH Trigger: ATGGACAGCTCCCAGCCCTCAGGCTCCTTCAAGATC...TGGGGTGGGATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR TCA 90 bp | ATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATCCCACCCCATGTGGCCTTCCCAGATaGGAGGGTCATCAAAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: IINTGKGGWGHCQVYPTPCGLPR*EGHQRG Trigger: CCCCCTTTGATGACCCTCTCATCTGGGAAGGCCACA...TGGGGTGGGATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR CCA 90 bp | ATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATCCCACCCCACTACCTTGGCCACTTGGATaGCCTCATCCAGCATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: INTGKGGWGHCQVYPTPLPWPLG*PHPASL Trigger: GAGAGATGCTGGATGAGGCCATCCAAGTGGCCAAGG...TAGTGGGGTGGGATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR TCA 90 bp | ATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATCCCACCCCACTACACAGCCTCCTGGTCTaGGATGACCTCGGAGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: INTGKGGWGHCQVYPTPLHSLLV*DDLGEN Trigger: ATTTTCTCCGAGGTCATCTCAGACCAGGAGGCTGTG...TAGTGGGGTGGGATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR GCA 90 bp | GGAAAAGTGCACATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGAACAGCTTCAGGGTCTaGGCCCCGACAGTGTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: GKVHIINTGKGGWGHCQVNSFRV*APTVFT Trigger: CGTGAACACTGTCGGGGCGCAGACCCTGAAGCTGTT...CACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAATGTGCACTTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR CCA 90 bp | CACATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATCCCACCTGGTGCCGGCCAATTTaGACAACGCCATGCTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HIINTGKGGWGHCQVYPTWCRPI*TTPCCH Trigger: GTGACAGCATGGCGTTGTCCAAATTGGCCGGCACCA...GGTGGGATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR CCA 90 bp | ATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATCCCACCCCATGGTGCCGGCCAATTTaGACAACGCCATGCTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: IINTGKGGWGHCQVYPTPWCRPI*TTPCCH Trigger: GTGACAGCATGGCGTTGTCCAAATTGGCCGGCACCA...TGGGGTGGGATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR CCA 90 bp | ATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATCCCACCCCAAGAGCCTTGGCCACTTaGATGGCCTCATCCAGCATC | + |
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Preference number: 4 (lower is better) Translates to: IINTGKGGWGHCQVYPTPRALAT*MASSSI Trigger: GATGCTGGATGAGGCCATCCAAGTGGCCAAGGCTCT...TGGGGTGGGATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR CCA 90 bp | CACATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATCCCACCAGAGCCTTGGCCACTTaGATGGCCTCATCCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: HIINTGKGGWGHCQVYPTRALAT*MASSSI Trigger: GATGCTGGATGAGGCCATCCAAGTGGCCAAGGCTCT...GGTGGGATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR CCA 90 bp | ATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATCCCACCCCATTCACAAGGGAAGTGTaGCCTTCCCAGATGAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: IINTGKGGWGHCQVYPTPFTREV*PSQMRG Trigger: CCCTCTCATCTGGGAAGGCCACACTTCCCTTGTGAA...TGGGGTGGGATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR TCA 90 bp | GGAAAAGTGCACATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGGCCCGCGTTGCCAGCTaGAGAACAGACAAAATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GKVHIINTGKGGWGHCQVARVAS*RTDKMS Trigger: AGACATTTTGTCTGTTCTTCAGCTGGCAACGCGGGC...CACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAATGTGCACTTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR GCA 90 bp | ATTTACAATGGAAAAGTGCACATTATAAACACAGGTAAAGGAGGGTGGGGCCATAGTGGGGTCTTCACATaGAGGGACTCCTGGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IYNGKVHIINTGKGGWGHSGVFT*RDSWAA Trigger: GGCTGCCCAGGAGTCCCTGCATGTGAAGACCCCACT...ATGGCCCCACCCTCCTTTACCTGTGTTTATAATGTGCACTTTTCCATTGTAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR GCA 90 bp | CACATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATCCCACCATTTGGACAACGCCATaGTGTCACGAAGTGGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HIINTGKGGWGHCQVYPTIWTTP*CHEVGS Trigger: AGACCCCACTTCGTGACAGCATGGCGTTGTCCAAAT...GGTGGGATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR GCA 90 bp | ATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATCCCACCCCAATTTGGACAACGCCATaGTGTCACGAAGTGGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IINTGKGGWGHCQVYPTPIWTTP*CHEVGS Trigger: AGACCCCACTTCGTGACAGCATGGCGTTGTCCAAAT...TGGGGTGGGATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR CCA 90 bp | GGAAAAGTGCACATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGCATGCTGTCACGAAGTaGGGTCTTCACATGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GKVHIINTGKGGWGHCQVHAVTK*GLHMQG Trigger: TCCCTGCATGTGAAGACCCCACTTCGTGACAGCATG...CACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAATGTGCACTTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR CCA 90 bp | ATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATCCCACCCCATCTTTTCCAGAGCCTTaGCCACTTGGATGGCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: IINTGKGGWGHCQVYPTPSFPEP*PLGWPH Trigger: ATGAGGCCATCCAAGTGGCCAAGGCTCTGGAAAAGA...TGGGGTGGGATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR CCA 90 bp | AAAGTGCACATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATGCAGACACAGCCTCCTaGTCTGAGATGACCTCGGAG | + |
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Preference number: 4 (lower is better) Translates to: KVHIINTGKGGWGHCQVYADTAS*SEMTSE Trigger: CTCCGAGGTCATCTCAGACCAGGAGGCTGTGTCTGC...ATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAATGTGCACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR TCA 90 bp | TTTATTTACAATGGAAAAGTGCACATTATAAACACAGGTAAAGGAGGGTGGGGCCAATGCCTCGGATCTTaGAGGAGCCTGAGGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: FIYNGKVHIINTGKGGWGQCLGS*RSLRAG Trigger: CCCAGCCCTCAGGCTCCTTCAAGATCCGAGGCATTG...GCCCCACCCTCCTTTACCTGTGTTTATAATGTGCACTTTTCCATTGTAAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR TCA 90 bp | ATTTACAATGGAAAAGTGCACATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTGGCCTTCCCAGATaGGAGGGTCATCAAAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: IYNGKVHIINTGKGGWGHCGLPR*EGHQRG Trigger: CCCCCTTTGATGACCCTCTCATCTGGGAAGGCCACA...ATGGCCCCACCCTCCTTTACCTGTGTTTATAATGTGCACTTTTCCATTGTAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR CCA 90 bp | TTTATTTACAATGGAAAAGTGCACATTATAAACACAGGTAAAGGAGGGTGGGGCCACAACGATAGTGGCTaGGATGCCCAGCCTCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: FIYNGKVHIINTGKGGWGHNDSG*DAQPPG Trigger: GCCAGGAGGCTGGGCATCCCAGCCACTATCGTTGTG...GCCCCACCCTCCTTTACCTGTGTTTATAATGTGCACTTTTCCATTGTAAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR CCA 90 bp | AAAGTGCACATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATCCTTGGCCACTTGGATaGCCTCATCCAGCATCTCTC | + |
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Preference number: 4 (lower is better) Translates to: KVHIINTGKGGWGHCQVYPWPLG*PHPASL Trigger: GAGAGATGCTGGATGAGGCCATCCAAGTGGCCAAGG...ATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAATGTGCACTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR CCA 90 bp | AAAGTGCACATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATTCCTTGATGGCAGCATaGAAGCTGTGGGCGCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: KVHIINTGKGGWGHCQVYSLMAA*KLWAPK Trigger: CTTTGGCGCCCACAGCTTCCATGCTGCCATCAAGGA...ATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAATGTGCACTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR TCA 90 bp | TTTATTTACAATGGAAAAGTGCACATTATAAACACAGGTAAAGGAGGGTGGGGCGATCTTGAAGGAGCCTaGGGGCTGGGAGCTGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: FIYNGKVHIINTGKGGWGDLEGA*GLGAVH Trigger: ATGGACAGCTCCCAGCCCTCAGGCTCCTTCAAGATC...GCCCCACCCTCCTTTACCTGTGTTTATAATGTGCACTTTTCCATTGTAAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR TCA 90 bp | ATTTACAATGGAAAAGTGCACATTATAAACACAGGTAAAGGAGGGTGGGGCCATCCTCCTGGTCTGAGATaGCCTCGGAGAAAATGGGGT | + |
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Preference number: 4 (lower is better) Translates to: IYNGKVHIINTGKGGWGHPPGLR*PRRKWG Trigger: ACCCCATTTTCTCCGAGGTCATCTCAGACCAGGAGG...ATGGCCCCACCCTCCTTTACCTGTGTTTATAATGTGCACTTTTCCATTGTAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR GCA 90 bp | TTTATTTACAATGGAAAAGTGCACATTATAAACACAGGTAAAGGAGGGTGGGGCAACAGCTTCAGGGTCTaGGCCCCGACAGTGTTCACG | + |
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Preference number: 4 (lower is better) Translates to: FIYNGKVHIINTGKGGWGNSFRV*APTVFT Trigger: CGTGAACACTGTCGGGGCGCAGACCCTGAAGCTGTT...GCCCCACCCTCCTTTACCTGTGTTTATAATGTGCACTTTTCCATTGTAAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR TCA 90 bp | ATTTACAATGGAAAAGTGCACATTATAAACACAGGTAAAGGAGGGTGGGGCCATCACAGCCTCCTGGTCTaGGATGACCTCGGAGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: IYNGKVHIINTGKGGWGHHSLLV*DDLGEN Trigger: ATTTTCTCCGAGGTCATCTCAGACCAGGAGGCTGTG...ATGGCCCCACCCTCCTTTACCTGTGTTTATAATGTGCACTTTTCCATTGTAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR CCA 90 bp | ATTTACAATGGAAAAGTGCACATTATAAACACAGGTAAAGGAGGGTGGGGCCATCATGCTGTCACGAAGTaGGGTCTTCACATGCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: IYNGKVHIINTGKGGWGHHAVTK*GLHMQG Trigger: TCCCTGCATGTGAAGACCCCACTTCGTGACAGCATG...ATGGCCCCACCCTCCTTTACCTGTGTTTATAATGTGCACTTTTCCATTGTAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR CCA 90 bp | ATTTACAATGGAAAAGTGCACATTATAAACACAGGTAAAGGAGGGTGGGGCCATAAGGAGCCTGAGGGCTaGGAGCTGTCCATTTTTAGG | + |
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Preference number: 4 (lower is better) Translates to: IYNGKVHIINTGKGGWGHKEPEG*ELSIFR Trigger: CCTAAAAATGGACAGCTCCCAGCCCTCAGGCTCCTT...ATGGCCCCACCCTCCTTTACCTGTGTTTATAATGTGCACTTTTCCATTGTAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR CCA 90 bp | AAAGTGCACATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATTCTTTTCCAGAGCCTTaGCCACTTGGATGGCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: KVHIINTGKGGWGHCQVYSFPEP*PLGWPH Trigger: ATGAGGCCATCCAAGTGGCCAAGGCTCTGGAAAAGA...ATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAATGTGCACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR CCA 90 bp | TTTATTTACAATGGAAAAGTGCACATTATAAACACAGGTAAAGGAGGGTGGGGCTCCTTGATGGCAGCATaGAAGCTGTGGGCGCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: FIYNGKVHIINTGKGGWGSLMAA*KLWAPK Trigger: CTTTGGCGCCCACAGCTTCCATGCTGCCATCAAGGA...GCCCCACCCTCCTTTACCTGTGTTTATAATGTGCACTTTTCCATTGTAAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR GCA 90 bp | CACATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATCCCACCTCTACAGCCTTGTTTTaGTTTCATCTTGCAGAGATG | + |
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Preference number: 4 (lower is better) Translates to: HIINTGKGGWGHCQVYPTSTALF*FHLAEM Trigger: CATCTCTGCAAGATGAAAGCAAAACAAGGCTGTAGA...GGTGGGATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR GCA 90 bp | AAAGTGCACATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATGTTTTGCTTTCATCTTaGAGAGATGCCCAATGCCTC | + |
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Preference number: 4 (lower is better) Translates to: KVHIINTGKGGWGHCQVYVLLSS*RDAQCL Trigger: GAGGCATTGGGCATCTCTGCAAGATGAAAGCAAAAC...ATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAATGTGCACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS GCA 90 bp | CCAGCGAGGCCAGTGGGGTTTGCAGCCGGCCTTCATCCTGCAGCCTaGACACCACGCGGCTGTACACAGCAGCCAGCGCCGCGCCGCACG | + |
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Preference number: 5 (lower is better) Translates to: PARPVGFAAGLHPAA*TPRGCTQQPAPRRT Trigger: CGTGCGGCGCGGCGCTGGCTGCTGTGTACAGCCGCGTGGTGTGCAGGCTGCAGGATGAAGGCCGGCTGCAAACCCCACTGGCCTCGCTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS TCA 90 bp | GTGCCTGCAGCTGCGCCAGGCTTATGTTGCTGCCGCCACACACGATaGCAACCAGCGAGGCCAGTGGGGTTTGCAGCCGGCCTTCATCCT | + |
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Preference number: 5 (lower is better) Translates to: VPAAAPGLCCCRHTR*QPARPVGFAAGLHP Trigger: AGGATGAAGGCCGGCTGCAAACCCCACTGGCCTCGCTGGTTGTCATCGTGTGTGGCGGCAGCAACATAAGCCTGGCGCAGCTGCAGGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS CCA 90 bp | GCTTATGTTGCTGCCGCCACACACGATGACAACCAGCGAGGCCAGTaGGGTTTGCAGCCGGCCTTCATCCTGCAGCCTGCACACCACGCG | + |
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Preference number: 5 (lower is better) Translates to: AYVAAATHDDNQRGQ*GLQPAFILQPAHHA Trigger: CGCGTGGTGTGCAGGCTGCAGGATGAAGGCCGGCTGCAAACCCCACTGGCCTCGCTGGTTGTCATCGTGTGTGGCGGCAGCAACATAAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS GCA 90 bp | AGGAGCCTGAGGGCTGGGAGCTGTCCATTTTTAGGAACACGCTGGTaGCGGCCAATTTGGACAACGCCATGCTGTCACGAAGTGGGGTCT | + |
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Preference number: 5 (lower is better) Translates to: RSLRAGSCPFLGTRW*RPIWTTPCCHEVGS Trigger: AGACCCCACTTCGTGACAGCATGGCGTTGTCCAAATTGGCCGGCACCAGCGTGTTCCTAAAAATGGACAGCTCCCAGCCCTCAGGCTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066540.14 ENSMUST00000111898.2 ENSMUST00000201684.4 |
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| CDS GCA 90 bp | GGATGCCCAGCCTCCTGGCAGCGTAGGCGGTCGCCATGCCCGCGTTaGCAGCTGAAGAACAGACAAAATGTCTACAGCCTTGTTTTGCTT | + |
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Preference number: 5 (lower is better) Translates to: GCPASWQRRRSPCPR*QLKNRQNVYSLVLL Trigger: AAGCAAAACAAGGCTGTAGACATTTTGTCTGTTCTTCAGCTGGCAACGCGGGCATGGCGACCGCCTACGCTGCCAGGAGGCTGGGCATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066540.14 ENSMUST00000111898.2 ENSMUST00000201684.4 |
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| CDS GCA 90 bp | CCATTTTTAGGAACACGCTGGTGCCGGCCAATTTGGACAACGCCATaGTGTCACGAAGTGGGGTCTTCACATGCAGGGACTCCTGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: PFLGTRWCRPIWTTP*CHEVGSSHAGTPGQ Trigger: CTGCCCAGGAGTCCCTGCATGTGAAGACCCCACTTCGTGACAGCATGGCGTTGTCCAAATTGGCCGGCACCAGCGTGTTCCTAAAAATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066540.14 ENSMUST00000111898.2 ENSMUST00000201684.4 |
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| CDS CCA 90 bp | GCTGGGAGCTGTCCATTTTTAGGAACACGCTGGTGCCGGCCAATTTaGACAACGCCATGCTGTCACGAAGTGGGGTCTTCACATGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: AGSCPFLGTRWCRPI*TTPCCHEVGSSHAG Trigger: CCCTGCATGTGAAGACCCCACTTCGTGACAGCATGGCGTTGTCCAAATTGGCCGGCACCAGCGTGTTCCTAAAAATGGACAGCTCCCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066540.14 ENSMUST00000111898.2 ENSMUST00000201684.4 |
||
| CDS-3UTR CAA 90 bp | CACATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATCCCACCCGAGGCCAGTGGGGTTaGCAGCCGGCCTTCATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: HIINTGKGGWGHCQVYPTRGQWG*QPAFIL Trigger: CAGGATGAAGGCCGGCTGCAAACCCCACTGGCCTCG...GGTGGGATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
||
| CDS-3UTR CAA 90 bp | GGAAAAGTGCACATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGACGATAGCCCCGGGCTaGGCGCTCAGCGTCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GKVHIINTGKGGWGHCQVTIAPG*ALSVSF Trigger: GAAGGAGACGCTGAGCGCCAAGCCCGGGGCTATCGT...CACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAATGTGCACTTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR CAA 90 bp | GGAAAAGTGCACATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGCGAGGCCAGTGGGGTTaGCAGCCGGCCTTCATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GKVHIINTGKGGWGHCQVRGQWG*QPAFIL Trigger: CAGGATGAAGGCCGGCTGCAAACCCCACTGGCCTCG...CACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAATGTGCACTTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR CAA 90 bp | CACATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATCCCACCCCAATGCCTCGGATCTaGAAGGAGCCTGAGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HIINTGKGGWGHCQVYPTPMPRI*KEPEGW Trigger: CCAGCCCTCAGGCTCCTTCAAGATCCGAGGCATTGG...GGTGGGATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR CAA 90 bp | ATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATCCCACCCCACTAGCGACACTGGTGATCTaGGGCAGGGTGACCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: INTGKGGWGHCQVYPTPLATLVI*GRVTSF Trigger: AAAGCTGGTCACCCTGCCCAAGATCACCAGTGTCGC...TAGTGGGGTGGGATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR CAA 90 bp | CACATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATCCCACCCTGGTGCCGGCCAATTaGGACAACGCCATGCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: HIINTGKGGWGHCQVYPTLVPAN*DNAMLS Trigger: TGACAGCATGGCGTTGTCCAAATTGGCCGGCACCAG...GGTGGGATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS-3UTR CAA 90 bp | ATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATCCCACCCCAGTGGCGCCTTCATTCTaGAGCCGCTCAATGGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: IINTGKGGWGHCQVYPTPVAPSF*SRSMVR Trigger: CCTCACCATTGAGCGGCTCAAGAATGAAGGCGCCAC...TGGGGTGGGATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
||
| CDS-3UTR CAA 90 bp | AAAGTGCACATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATCCAATGCCTCGGATCTaGAAGGAGCCTGAGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KVHIINTGKGGWGHCQVYPMPRI*KEPEGW Trigger: CCAGCCCTCAGGCTCCTTCAAGATCCGAGGCATTGG...ATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAATGTGCACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
||
| CDS-3UTR CAA 90 bp | ATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATCCCACCCCATACACCCAACCCGGGTaGTTCTTTTCCAGAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: IINTGKGGWGHCQVYPTPYTQPG*FFSRAL Trigger: CAAGGCTCTGGAAAAGAACAACCCGGGTTGGGTGTA...TGGGGTGGGATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
||
| CDS-3UTR CAA 90 bp | TTTATTTACAATGGAAAAGTGCACATTATAAACACAGGTAAAGGAGGGTGGGGCACGATAGCCCCGGGCTaGGCGCTCAGCGTCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FIYNGKVHIINTGKGGWGTIAPG*ALSVSF Trigger: GAAGGAGACGCTGAGCGCCAAGCCCGGGGCTATCGT...GCCCCACCCTCCTTTACCTGTGTTTATAATGTGCACTTTTCCATTGTAAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
||
| CDS-3UTR CAA 90 bp | AAAGTGCACATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATCTGGTGCCGGCCAATTaGGACAACGCCATGCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KVHIINTGKGGWGHCQVYLVPAN*DNAMLS Trigger: TGACAGCATGGCGTTGTCCAAATTGGCCGGCACCAG...ATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAATGTGCACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
||
| CDS-3UTR CAA 90 bp | AAAGTGCACATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATGTGGCGCCTTCATTCTaGAGCCGCTCAATGGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KVHIINTGKGGWGHCQVYVAPSF*SRSMVR Trigger: CCTCACCATTGAGCGGCTCAAGAATGAAGGCGCCAC...ATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAATGTGCACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
||
| CDS-3UTR CAA 90 bp | AAAGTGCACATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATCAGAGCCTTGGCCACTaGGATGGCCTCATCCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: KVHIINTGKGGWGHCQVYQSLGH*DGLIQH Trigger: ATGCTGGATGAGGCCATCCAAGTGGCCAAGGCTCTG...ATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAATGTGCACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
||
| CDS-3UTR CAA 90 bp | ATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATCCCACCCCACTATGTTTTGCTTTCATCTaGCAGAGATGCCCAATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: INTGKGGWGHCQVYPTPLCFAFI*QRCPMP Trigger: AGGCATTGGGCATCTCTGCAAGATGAAAGCAAAACA...TAGTGGGGTGGGATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
||
| CDS-3UTR CAA 90 bp | TTTATTTACAATGGAAAAGTGCACATTATAAACACAGGTAAAGGAGGGTGGGGCGCGACACTGGTGATCTaGGGCAGGGTGACCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FIYNGKVHIINTGKGGWGATLVI*GRVTSF Trigger: AAAGCTGGTCACCCTGCCCAAGATCACCAGTGTCGC...GCCCCACCCTCCTTTACCTGTGTTTATAATGTGCACTTTTCCATTGTAAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
||
| CDS-3UTR CAA 90 bp | ATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGTATCCCACCCCAGTCTACAGCCTTGTTTaGCTTTCATCTTGCAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: IINTGKGGWGHCQVYPTPVYSLV*LSSCRD Trigger: ATCTCTGCAAGATGAAAGCAAAACAAGGCTGTAGAC...TGGGGTGGGATACACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
||
| CDS-3UTR CAA 90 bp | GGAAAAGTGCACATTATAAACACAGGTAAAGGAGGGTGGGGCCATTGTCAAGTGGTCTACAGCCTTGTTTaGCTTTCATCTTGCAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: GKVHIINTGKGGWGHCQVVYSLV*LSSCRD Trigger: ATCTCTGCAAGATGAAAGCAAAACAAGGCTGTAGAC...CACTTGACAATGGCCCCACCCTCCTTTACCTGTGTTTATAATGTGCACTTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
||
| CDS-3UTR CAA 90 bp | TTTATTTACAATGGAAAAGTGCACATTATAAACACAGGTAAAGGAGGGTGGGGCTACACCCAACCCGGGTaGTTCTTTTCCAGAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FIYNGKVHIINTGKGGWGYTQPG*FFSRAL Trigger: CAAGGCTCTGGAAAAGAACAACCCGGGTTGGGTGTA...GCCCCACCCTCCTTTACCTGTGTTTATAATGTGCACTTTTCCATTGTAAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
||
| CDS GCA 72 bp | CCAGTGGGGTTTGCAGCCGGCCTTCATCCTGCAGCCTaGACACCACGCGGCTGTACACAGCAGCCAGCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: PVGFAAGLHPAA*TPRGCTQQPAP Trigger: CGGCGCTGGCTGCTGTGTACAGCCGCGTGGTGTGCAGGCTGCAGGATGAAGGCCGGCTGCAAACCCCACTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS GCA 72 bp | GGCAGCCCGTTCAGGCCCAGCTGCACCTTGAGTGCCTaGAGCTGCGCCAGGCTTATGTTGCTGCCGCCACAC | + |
|
Preference number: 6 (lower is better) Translates to: GSPFRPSCTLSA*SCARLMLLPPH Trigger: GTGTGGCGGCAGCAACATAAGCCTGGCGCAGCTGCAGGCACTCAAGGTGCAGCTGGGCCTGAACGGGCTGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
||
| CDS TCA 72 bp | GCTGCGCCAGGCTTATGTTGCTGCCGCCACACACGATaGCAACCAGCGAGGCCAGTGGGGTTTGCAGCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: AAPGLCCCRHTR*QPARPVGFAAG Trigger: GCCGGCTGCAAACCCCACTGGCCTCGCTGGTTGTCATCGTGTGTGGCGGCAGCAACATAAGCCTGGCGCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
||
| CDS CCA 72 bp | GCTGCCGCCACACACGATGACAACCAGCGAGGCCAGTaGGGTTTGCAGCCGGCCTTCATCCTGCAGCCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: AAATHDDNQRGQ*GLQPAFILQPA Trigger: TGCAGGCTGCAGGATGAAGGCCGGCTGCAAACCCCACTGGCCTCGCTGGTTGTCATCGTGTGTGGCGGCAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
||
| CDS CAA 72 bp | AGGGTCTGCGCCCCGACAGTGTTCACGCCCAAGGCCTaGGCGACACTGGTGATCTTGGGCAGGGTGACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RVCAPTVFTPKA*ATLVILGRVTS Trigger: GCTGGTCACCCTGCCCAAGATCACCAGTGTCGCCAAGGCCTTGGGCGTGAACACTGTCGGGGCGCAGACCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS GCA 72 bp | CCACACACGATGACAACCAGCGAGGCCAGTGGGGTTTaGAGCCGGCCTTCATCCTGCAGCCTGCACACCACG | + |
|
Preference number: 6 (lower is better) Translates to: PHTMTTSEASGV*SRPSSCSLHTT Trigger: CGTGGTGTGCAGGCTGCAGGATGAAGGCCGGCTGCAAACCCCACTGGCCTCGCTGGTTGTCATCGTGTGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS CAA 72 bp | GCCACACACGATGACAACCAGCGAGGCCAGTGGGGTTaGCAGCCGGCCTTCATCCTGCAGCCTGCACACCAC | + |
|
Preference number: 6 (lower is better) Translates to: ATHDDNQRGQWG*QPAFILQPAHH Trigger: GTGGTGTGCAGGCTGCAGGATGAAGGCCGGCTGCAAACCCCACTGGCCTCGCTGGTTGTCATCGTGTGTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS CAA 90 bp | CACAGCAGGCCTCCACCGCCCACAGACAGCACGATAGCCCCGGGCTaGGCGCTCAGCGTCTCCTTCAGCTCTTTCACAAGGGAAGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: HSRPPPPTDSTIAPG*ALSVSFSSFTREVW Trigger: CCACACTTCCCTTGTGAAAGAGCTGAAGGAGACGCTGAGCGCCAAGCCCGGGGCTATCGTGCTGTCTGTGGGCGGTGGAGGCCTGCTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
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| CDS CAA 90 bp | GCGCCTTCATTCTTGAGCCGCTCAATGGTGAGGGCAGGTGTGGTGTaGGGCACAACGATAGTGGCTGGGATGCCCAGCCTCCTGGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: APSFLSRSMVRAGVV*GTTIVAGMPSLLAA Trigger: CGCTGCCAGGAGGCTGGGCATCCCAGCCACTATCGTTGTGCCCAACACCACACCTGCCCTCACCATTGAGCGGCTCAAGAATGAAGGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
||
| CDS CAA 90 bp | GCCCCGACAGTGTTCACGCCCAAGGCCTTGGCGACACTGGTGATCTaGGGCAGGGTGACCAGCTTTCCTTCCTTGATGGCAGCATGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: APTVFTPKALATLVI*GRVTSFPSLMAAWK Trigger: CTTCCATGCTGCCATCAAGGAAGGAAAGCTGGTCACCCTGCCCAAGATCACCAGTGTCGCCAAGGCCTTGGGCGTGAACACTGTCGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
||
| CDS GCA 72 bp | GCCTCCTGGCAGCGTAGGCGGTCGCCATGCCCGCGTTaGCAGCTGAAGAACAGACAAAATGTCTACAGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: ASWQRRRSPCPR*QLKNRQNVYSL Trigger: AAGGCTGTAGACATTTTGTCTGTTCTTCAGCTGGCAACGCGGGCATGGCGACCGCCTACGCTGCCAGGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066540.14 ENSMUST00000111898.2 ENSMUST00000201684.4 |
||
| CDS GCA 72 bp | GGAACACGCTGGTGCCGGCCAATTTGGACAACGCCATaGTGTCACGAAGTGGGGTCTTCACATGCAGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: GTRWCRPIWTTP*CHEVGSSHAGT Trigger: AGTCCCTGCATGTGAAGACCCCACTTCGTGACAGCATGGCGTTGTCCAAATTGGCCGGCACCAGCGTGTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066540.14 ENSMUST00000111898.2 ENSMUST00000201684.4 |
||
| CDS CAA 72 bp | GTGTTCACGCCCAAGGCCTTGGCGACACTGGTGATCTaGGGCAGGGTGACCAGCTTTCCTTCCTTGATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: VFTPKALATLVI*GRVTSFPSLMA Trigger: TGCCATCAAGGAAGGAAAGCTGGTCACCCTGCCCAAGATCACCAGTGTCGCCAAGGCCTTGGGCGTGAACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
||
| CDS CAA 90 bp | GGCTGGGAGCTGTCCATTTTTAGGAACACGCTGGTGCCGGCCAATTaGGACAACGCCATGCTGTCACGAAGTGGGGTCTTCACATGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GWELSIFRNTLVPAN*DNAMLSRSGVFTCR Trigger: CCTGCATGTGAAGACCCCACTTCGTGACAGCATGGCGTTGTCCAAATTGGCCGGCACCAGCGTGTTCCTAAAAATGGACAGCTCCCAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066540.14 ENSMUST00000111898.2 ENSMUST00000201684.4 |
||
| CDS CAA 90 bp | TCATCCAGCATCTCTCCCACCACTTCAACTGTGGCGCCTTCATTCTaGAGCCGCTCAATGGTGAGGGCAGGTGTGGTGTTGGGCACAACG | + |
|
Preference number: 6 (lower is better) Translates to: SSSISPTTSTVAPSF*SRSMVRAGVVLGTT Trigger: CGTTGTGCCCAACACCACACCTGCCCTCACCATTGAGCGGCTCAAGAATGAAGGCGCCACAGTTGAAGTGGTGGGAGAGATGCTGGATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
||
| CDS TCA 72 bp | GGCAGCGTAGGCGGTCGCCATGCCCGCGTTGCCAGCTaGAGAACAGACAAAATGTCTACAGCCTTGTTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: GSVGGRHARVAS*RTDKMSTALFC Trigger: GCAAAACAAGGCTGTAGACATTTTGTCTGTTCTTCAGCTGGCAACGCGGGCATGGCGACCGCCTACGCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066540.14 ENSMUST00000111898.2 ENSMUST00000201684.4 |
||
| CDS CAA 72 bp | ATCTCTCCCACCACTTCAACTGTGGCGCCTTCATTCTaGAGCCGCTCAATGGTGAGGGCAGGTGTGGTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: ISPTTSTVAPSF*SRSMVRAGVVL Trigger: CAACACCACACCTGCCCTCACCATTGAGCGGCTCAAGAATGAAGGCGCCACAGTTGAAGTGGTGGGAGAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
||
| CDS CAA 72 bp | GGGTCATCAAAGGGGGAAATGTACACCCAACCCGGGTaGTTCTTTTCCAGAGCCTTGGCCACTTGGATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GSSKGEMYTQPG*FFSRALATWMA Trigger: GGCCATCCAAGTGGCCAAGGCTCTGGAAAAGAACAACCCGGGTTGGGTGTACATTTCCCCCTTTGATGACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
||
| CDS CAA 90 bp | CAGATGAGAGGGTCATCAAAGGGGGAAATGTACACCCAACCCGGGTaGTTCTTTTCCAGAGCCTTGGCCACTTGGATGGCCTCATCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: QMRGSSKGEMYTQPG*FFSRALATWMASSS Trigger: GCTGGATGAGGCCATCCAAGTGGCCAAGGCTCTGGAAAAGAACAACCCGGGTTGGGTGTACATTTCCCCCTTTGATGACCCTCTCATCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
||
| CDS CCA 72 bp | TCGTCCACGAACTTCTCAAGAGCAGACACAGCCTCCTaGTCTGAGATGACCTCGGAGAAAATGGGGTGTTCG | + |
|
Preference number: 6 (lower is better) Translates to: SSTNFSRADTAS*SEMTSEKMGCS Trigger: CGAACACCCCATTTTCTCCGAGGTCATCTCAGACCAGGAGGCTGTGTCTGCTCTTGAGAAGTTCGTGGACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066540.14 ENSMUST00000201684.4 |
||
| CDS CAA 72 bp | CTGTCCATTTTTAGGAACACGCTGGTGCCGGCCAATTaGGACAACGCCATGCTGTCACGAAGTGGGGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LSIFRNTLVPAN*DNAMLSRSGVF Trigger: GAAGACCCCACTTCGTGACAGCATGGCGTTGTCCAAATTGGCCGGCACCAGCGTGTTCCTAAAAATGGACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066540.14 ENSMUST00000111898.2 ENSMUST00000201684.4 |
||
| CDS CCA 72 bp | TGTCCATTTTTAGGAACACGCTGGTGCCGGCCAATTTaGACAACGCCATGCTGTCACGAAGTGGGGTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: CPFLGTRWCRPI*TTPCCHEVGSS Trigger: TGAAGACCCCACTTCGTGACAGCATGGCGTTGTCCAAATTGGCCGGCACCAGCGTGTTCCTAAAAATGGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066540.14 ENSMUST00000111898.2 ENSMUST00000201684.4 |
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