Pregenerated sensors for SDR9C7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040127Ensembl transcript IDs: ENSMUST00000047134.8
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTACATCAGCCGGGGTCACATCAGGTTTCTAGAGGCCCCAGCAGATaGAAGGAGACATCAGCCTGCAGTGGGAGTGAGCTGAGTATGCTC | + |
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Preference number: 1 (lower is better) Translates to: LHQPGSHQVSRGPSR*KETSACSGSELSML Trigger: GAGCATACTCAGCTCACTCCCACTGCAGGCTGATGTCTCCTTCCATCTGCTGGGGCCTCTAGAAACCTGATGTGACCCCGGCTGATGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| 3UTR TCA 90 bp | TTTGACCACTTAGCTGGGTGCCTTGGCGAAAATGACTTCCCACTCTaGGCTGATTGGCTGCTTCTCCTGTGGGACTATCACTGCCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: FDHLAGCLGENDFPL*ADWLLLLWDYHCLP Trigger: TGGGAGGCAGTGATAGTCCCACAGGAGAAGCAGCCAATCAGCTCAGAGTGGGAAGTCATTTTCGCCAAGGCACCCAGCTAAGTGGTCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| 3UTR GCA 90 bp | CATCAGGTTTCTAGAGGCCCCAGCAGATGGAAGGAGACATCAGCCTaGAGTGGGAGTGAGCTGAGTATGCTCTTCTCTGCCCACAAGATA | + |
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Preference number: 1 (lower is better) Translates to: HQVSRGPSRWKETSA*SGSELSMLFSAHKI Trigger: TATCTTGTGGGCAGAGAAGAGCATACTCAGCTCACTCCCACTGCAGGCTGATGTCTCCTTCCATCTGCTGGGGCCTCTAGAAACCTGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| 3UTR GCA 90 bp | TCTTGTTGCCATGTTACATATTCCATATATACACAAACCAGTGCCTaGTTTGAGAGCTGTGGGGAGGGGACCGAGATTCTCCTGTGGGCT | + |
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Preference number: 1 (lower is better) Translates to: SCCHVTYSIYTQTSA*FESCGEGTEILLWA Trigger: AGCCCACAGGAGAATCTCGGTCCCCTCCCCACAGCTCTCAAAGCAGGCACTGGTTTGTGTATATATGGAATATGTAACATGGCAACAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| 3UTR CCA 90 bp | TTGCCTGCATGTATCAATACACATTACATTCATGCTTGGTACCTGTaGAGGTCAGAAGGGGGCATCCGATCCCCTGGAACTGGAATTATG | + |
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Preference number: 1 (lower is better) Translates to: LPACINTHYIHAWYL*RSEGGIRSPGTGIM Trigger: CATAATTCCAGTTCCAGGGGATCGGATGCCCCCTTCTGACCTCCACAGGTACCAAGCATGAATGTAATGTGTATTGATACATGCAGGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| 3UTR-3UTR TCA 90 bp | GCACTAGTACCTGCCTTGGTGAGGGGTGTCTTGCGGCCTATGCTGCAACGCTCTAGCCTGCAGTGGGAGTaGGCTGAGTATGCTCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: ALVPALVRGVLRPMLQRSSLQWE*AEYALL Trigger: GAGAAGAGCATACTCAGCTCACTCCCACTGCAGGCT...AGAGCGTTGCAGCATAGGCCGCAAGACACCCCTCACCAAGGCAGGTACTAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| 3UTR-3UTR GCA 90 bp | GTCCTTAGTACACAATTCATAGTTCTGGGCTCTGCCTCACTCAGGTTTATTGAATTGCCCTCTCCCCTGTaGTCCACTGGCTACCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: VLSTQFIVLGSASLRFIELPSPL*STGYPL Trigger: CAAGGGGTAGCCAGTGGAGCACAGGGGAGAGGGCAA...TTCAATAAACCTGAGTGAGGCAGAGCCCAGAACTATGAATTGTGTACTAAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| 3UTR CAA 90 bp | GTTGCCATGTTACATATTCCATATATACACAAACCAGTGCCTGCTTaGAGAGCTGTGGGGAGGGGACCGAGATTCTCCTGTGGGCTAGAT | + |
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Preference number: 2 (lower is better) Translates to: VAMLHIPYIHKPVPA*RAVGRGPRFSCGLD Trigger: ATCTAGCCCACAGGAGAATCTCGGTCCCCTCCCCACAGCTCTCAAAGCAGGCACTGGTTTGTGTATATATGGAATATGTAACATGGCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| 3UTR CAA 90 bp | GATGTTACAAACAGTTCATCACCTGCTGCTGGAAAAGGGTTCTGTTaGTTTGACCACTTAGCTGGGTGCCTTGGCGAAAATGACTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: DVTNSSSPAAGKGFC*FDHLAGCLGENDFP Trigger: TGGGAAGTCATTTTCGCCAAGGCACCCAGCTAAGTGGTCAAACAAACAGAACCCTTTTCCAGCAGCAGGTGATGAACTGTTTGTAACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| 3UTR-3UTR GCA 90 bp | ATGTTACATATTCCATATATACACAAACCAGTGCCTGCTTTGAGAGCTGTGGGGAGGAGCACTAGTACCTaGCTTGGTGAGGGGTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: MLHIPYIHKPVPALRAVGRSTST*LGEGCL Trigger: AAGACACCCCTCACCAAGGCAGGTACTAGTGCTCCT...CCCCACAGCTCTCAAAGCAGGCACTGGTTTGTGTATATATGGAATATGTAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| 3UTR-3UTR CCA 90 bp | AAATCCTCCTGTCTTAGCCCCATAAATGTTGGGATTACAAACATGAGATACCATAGAGGCCCCAGCAGATaGAAGGAGACATCAGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: KSSCLSPINVGITNMRYHRGPSR*KETSAC Trigger: GCAGGCTGATGTCTCCTTCCATCTGCTGGGGCCTCT...ATGGTATCTCATGTTTGTAATCCCAACATTTATGGGGCTAAGACAGGAGGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCTTAGTACACAATTCATAGTTCTGGGCTCTGCCTCACTCAGGTTTATTGAACCGATCCCCTGGAACTaGAATTATGGAGGCTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: VLSTQFIVLGSASLRFIEPIPWN*NYGGCE Trigger: CTCACAGCCTCCATAATTCCAGTTCCAGGGGATCGG...TTCAATAAACCTGAGTGAGGCAGAGCCCAGAACTATGAATTGTGTACTAAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| 3UTR-3UTR TCA 90 bp | ATGTTACATATTCCATATATACACAAACCAGTGCCTGCTTTGAGAGCTGTGGGGGTTTTACGGAGGTGGTaGCAGCTTGTCAGTCAACAG | + |
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Preference number: 2 (lower is better) Translates to: MLHIPYIHKPVPALRAVGVLRRW*QLVSQQ Trigger: CTGTTGACTGACAAGCTGTCACCACCTCCGTAAAAC...CCCCACAGCTCTCAAAGCAGGCACTGGTTTGTGTATATATGGAATATGTAACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| 3UTR-3UTR GCA 90 bp | AAATCCTCCTGTCTTAGCCCCATAAATGTTGGGATTACAAACATGAGATACCATACACAAACCAGTGCCTaGTTTGAGAGCTGTGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: KSSCLSPINVGITNMRYHTQTSA*FESCGE Trigger: CTCCCCACAGCTCTCAAAGCAGGCACTGGTTTGTGT...ATGGTATCTCATGTTTGTAATCCCAACATTTATGGGGCTAAGACAGGAGGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| 3UTR-3UTR GCA 90 bp | ATGTATCAATACACATTACATTCATGCTTGGTACCTGTGGAGGTCAGAAGGGGGTCTGGCAGTTCTTGTTaGCATGTTACATATTCCATA | + |
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Preference number: 2 (lower is better) Translates to: MYQYTLHSCLVPVEVRRGSGSSC*HVTYSI Trigger: TATGGAATATGTAACATGGCAACAAGAACTGCCAGA...CCCCCTTCTGACCTCCACAGGTACCAAGCATGAATGTAATGTGTATTGATACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| 3UTR CAA 90 bp | GAAAACTATTTAAAACCTTCTCTGAGTATGCTCTGGCAGTTCTTGTaGCCATGTTACATATTCCATATATACACAAACCAGTGCCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: ENYLKPSLSMLWQFL*PCYIFHIYTNQCLL Trigger: AAGCAGGCACTGGTTTGTGTATATATGGAATATGTAACATGGCAACAAGAACTGCCAGAGCATACTCAGAGAAGGTTTTAAATAGTTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| 3UTR CAA 90 bp | AAAGAAAACTATTTAAAACCTTCTCTGAGTATGCTCTGGCAGTTCTaGTTGCCATGTTACATATTCCATATATACACAAACCAGTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: KENYLKPSLSMLWQF*LPCYIFHIYTNQCL Trigger: CAGGCACTGGTTTGTGTATATATGGAATATGTAACATGGCAACAAGAACTGCCAGAGCATACTCAGAGAAGGTTTTAAATAGTTTTCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| 3UTR CCA 72 bp | CCGGGGTCACATCAGGTTTCTAGAGGCCCCAGCAGATaGAAGGAGACATCAGCCTGCAGTGGGAGTGAGCTG | + |
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Preference number: 3 (lower is better) Translates to: PGSHQVSRGPSR*KETSACSGSEL Trigger: CAGCTCACTCCCACTGCAGGCTGATGTCTCCTTCCATCTGCTGGGGCCTCTAGAAACCTGATGTGACCCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| 3UTR CCA 72 bp | GTACCTGTGGAGGTCAGAAGGGGGCATCCGATCCCCTaGAACTGGAATTATGGAGGCTGTGAGACACGGTGT | + |
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Preference number: 3 (lower is better) Translates to: VPVEVRRGHPIP*NWNYGGCETRC Trigger: ACACCGTGTCTCACAGCCTCCATAATTCCAGTTCCAGGGGATCGGATGCCCCCTTCTGACCTCCACAGGTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| 3UTR GCA 72 bp | GCTGCTTCTCCTGTGGGACTATCACTGCCTCCCAGGTaGGCAGGTACATTTAGGTCCTTAGTACACAATTCA | + |
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Preference number: 3 (lower is better) Translates to: AASPVGLSLPPR*AGTFRSLVHNS Trigger: TGAATTGTGTACTAAGGACCTAAATGTACCTGCGCACCTGGGAGGCAGTGATAGTCCCACAGGAGAAGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| 3UTR TCA 72 bp | GATGGAAGGAGACATCAGCCTGCAGTGGGAGTGAGCTaGGTATGCTCTTCTCTGCCCACAAGATATATGACA | + |
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Preference number: 3 (lower is better) Translates to: DGRRHQPAVGVS*VCSSLPTRYMT Trigger: TGTCATATATCTTGTGGGCAGAGAAGAGCATACTCAGCTCACTCCCACTGCAGGCTGATGTCTCCTTCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| 3UTR TCA 72 bp | TACATATTCCATATATACACAAACCAGTGCCTGCTTTaGGAGCTGTGGGGAGGGGACCGAGATTCTCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: YIFHIYTNQCLL*ELWGGDRDSPV Trigger: CACAGGAGAATCTCGGTCCCCTCCCCACAGCTCTCAAAGCAGGCACTGGTTTGTGTATATATGGAATATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| 3UTR-3UTR CAA 90 bp | AAATCCTCCTGTCTTAGCCCCATAAATGTTGGGATTACAAACATGAGATACCATAAACCAGTGCCTGCTTaGAGAGCTGTGGGGAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: KSSCLSPINVGITNMRYHKPVPA*RAVGRG Trigger: TCCCCTCCCCACAGCTCTCAAAGCAGGCACTGGTTT...ATGGTATCTCATGTTTGTAATCCCAACATTTATGGGGCTAAGACAGGAGGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| 3UTR GCA 72 bp | GTTTTTGCCTGCATGTATCAATACACATTACATTCATaGTTGGTACCTGTGGAGGTCAGAAGGGGGCATCCG | + |
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Preference number: 3 (lower is better) Translates to: VFACMYQYTLHS*LVPVEVRRGHP Trigger: CGGATGCCCCCTTCTGACCTCCACAGGTACCAAGCATGAATGTAATGTGTATTGATACATGCAGGCAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| 3UTR TCA 72 bp | ATTCATAGTTCTGGGCTCTGCCTCACTCAGGTTTATTaGATCGGATTTTCTAACATTGGGGTTCCTATGAGT | + |
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Preference number: 3 (lower is better) Translates to: IHSSGLCLTQVY*IGFSNIGVPMS Trigger: ACTCATAGGAACCCCAATGTTAGAAAATCCGATTCAATAAACCTGAGTGAGGCAGAGCCCAGAACTATGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS-3UTR TCA 90 bp | ACAACACCTCTTGTGATCCCCCAGTCCTTTGCCCTCTCCCCTGTGCTCCACTGGGAGCCCCCTCCTCAGTaGGGCAGGCAGCAAGCACTT | + |
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Preference number: 4 (lower is better) Translates to: TTPLVIPQSFALSPVLHWEPPPQ*GRQQAL Trigger: AAGTGCTTGCTGCCTGCCTCACTGAGGAGGGGGCTC...CCAGTGGAGCACAGGGGAGAGGGCAAAGGACTGGGGGATCACAAGAGGTGTTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS-3UTR CCA 90 bp | ACAACACCTCTTGTGATCCCCCAGTCCTTTGCCCTCTCCCCTGTGCTCCACTGGATTCGTTGGGACCACTaGGCAGGCCCACGCCAGCGT | + |
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Preference number: 4 (lower is better) Translates to: TTPLVIPQSFALSPVLHWIRWDH*AGPRQR Trigger: ACGCTGGCGTGGGCCTGCCCAGTGGTCCCAACGAAT...CCAGTGGAGCACAGGGGAGAGGGCAAAGGACTGGGGGATCACAAGAGGTGTTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS-3UTR CCA 90 bp | ACAACACCTCTTGTGATCCCCCAGTCCTTTGCCCTCTCCCCTGTGCTCCACTGGATCCCGGGTCTCCTGTaGCAGCCGATCCCACAGCTT | + |
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Preference number: 4 (lower is better) Translates to: TTPLVIPQSFALSPVLHWIPGLL*QPIPQL Trigger: AAGCTGTGGGATCGGCTGCCACAGGAGACCCGGGAT...CCAGTGGAGCACAGGGGAGAGGGCAAAGGACTGGGGGATCACAAGAGGTGTTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS-3UTR TCA 90 bp | GGGTCACATCAGGTTTCTAGAGGCCCCAGCAGATGGAAGGAGACATCAGCCTGCTCCTGCAGGAGTTTCTaGGCCCCCTCCTCAGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: GSHQVSRGPSRWKETSACSCRSF*APSSVR Trigger: CCTCACTGAGGAGGGGGCTCAGAAACTCCTGCAGGA...GCAGGCTGATGTCTCCTTCCATCTGCTGGGGCCTCTAGAAACCTGATGTGACCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS-3UTR CCA 90 bp | GCACTAGTACCTGCCTTGGTGAGGGGTGTCTTGCGGCCTATGCTGCAACGCTCTAAGGTCTGCAGCTGGTaGGAGGTGTCCTGCAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: ALVPALVRGVLRPMLQRSKVCSW*EVSCRS Trigger: ACTCCTGCAGGACACCTCCCACCAGCTGCAGACCTT...AGAGCGTTGCAGCATAGGCCGCAAGACACCCCTCACCAAGGCAGGTACTAGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS-3UTR CCA 90 bp | CATCAGCCGGGGTCACATCAGGTTTCTAGAGGCCCCAGCAGATGGAAGGAGACATGGTCAGCCATTCGTTaGGACCACTGGGCAGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: HQPGSHQVSRGPSRWKETWSAIR*DHWAGP Trigger: TGGGCCTGCCCAGTGGTCCCAACGAATGGCTGACCA...TGTCTCCTTCCATCTGCTGGGGCCTCTAGAAACCTGATGTGACCCCGGCTGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS-3UTR GCA 90 bp | CATCAGCCGGGGTCACATCAGGTTTCTAGAGGCCCCAGCAGATGGAAGGAGACATCTAGGAGGAAGGTCTaGAGCTGGTGGGAGGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: HQPGSHQVSRGPSRWKETSRRKV*SWWEVS Trigger: GGACACCTCCCACCAGCTGCAGACCTTCCTCCTAGA...TGTCTCCTTCCATCTGCTGGGGCCTCTAGAAACCTGATGTGACCCCGGCTGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS-3UTR GCA 90 bp | ACAACACCTCTTGTGATCCCCCAGTCCTTTGCCCTCTCCCCTGTGCTCCACTGGCCCACAGCTTCTTCATaGGTGATTCCAGAGCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: TTPLVIPQSFALSPVLHWPTASS*VIPELL Trigger: AAGAAGCTCTGGAATCACGCATGAAGAAGCTGTGGG...CCAGTGGAGCACAGGGGAGAGGGCAAAGGACTGGGGGATCACAAGAGGTGTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS-3UTR TCA 90 bp | ACAACACCTCTTGTGATCCCCCAGTCCTTTGCCCTCTCCCCTGTGCTCCACTGGGATTCTTGGCTCTGCTaGCCTCATCAAGTTAACCAA | + |
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Preference number: 4 (lower is better) Translates to: TTPLVIPQSFALSPVLHWDSWLC*PHQVNQ Trigger: TTGGTTAACTTGATGAGGTCAGCAGAGCCAAGAATC...CCAGTGGAGCACAGGGGAGAGGGCAAAGGACTGGGGGATCACAAGAGGTGTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS-3UTR CCA 90 bp | GGGTCACATCAGGTTTCTAGAGGCCCCAGCAGATGGAAGGAGACATCAGCCTGCCTTCAACACCAAACTTaGAGACACAGTAACCACCGC | + |
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Preference number: 4 (lower is better) Translates to: GSHQVSRGPSRWKETSACLQHQT*RHSNHR Trigger: GCGGTGGTTACTGTGTCTCCAAGTTTGGTGTTGAAG...GCAGGCTGATGTCTCCTTCCATCTGCTGGGGCCTCTAGAAACCTGATGTGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS-3UTR TCA 90 bp | ATGTATCAATACACATTACATTCATGCTTGGTACCTGTGGAGGTCAGAAGGGGGCAGAGCTGGACATGTTaGCCACCCTGCCCCGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: MYQYTLHSCLVPVEVRRGQSWTC*PPCPGL Trigger: AAGCCCGGGGCAGGGTGGTCAACATGTCCAGCTCTG...CCCCCTTCTGACCTCCACAGGTACCAAGCATGAATGTAATGTGTATTGATACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS-3UTR CCA 90 bp | GGGTCACATCAGGTTTCTAGAGGCCCCAGCAGATGGAAGGAGACATCAGCCTGCTCACAAAGTCTTTTATaGTCAGCCATTCGTTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: GSHQVSRGPSRWKETSACSQSLL*SAIRWD Trigger: GTCCCAACGAATGGCTGACCATAAAAGACTTTGTGA...GCAGGCTGATGTCTCCTTCCATCTGCTGGGGCCTCTAGAAACCTGATGTGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS-3UTR CCA 90 bp | ATGTTACATATTCCATATATACACAAACCAGTGCCTGCTTTGAGAGCTGTGGGGGGCTCCGGGAGACAATaGCGTGCTCCATGCTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: MLHIPYIHKPVPALRAVGGSGRQ*RAPCCW Trigger: CCAACAGCATGGAGCACGCCATTGTCTCCCGGAGCC...CCCCACAGCTCTCAAAGCAGGCACTGGTTTGTGTATATATGGAATATGTAACAT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS-3UTR TCA 90 bp | ATGTATCAATACACATTACATTCATGCTTGGTACCTGTGGAGGTCAGAAGGGGGTGCCCCGGGCTTTCTTaGTCATCGGCAGCATGTTCA | + |
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Preference number: 4 (lower is better) Translates to: MYQYTLHSCLVPVEVRRGCPGLS*SSAACS Trigger: TGAACATGCTGCCGATGATCAAGAAAGCCCGGGGCA...CCCCCTTCTGACCTCCACAGGTACCAAGCATGAATGTAATGTGTATTGATACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS-3UTR GCA 90 bp | ATGTATCAATACACATTACATTCATGCTTGGTACCTGTGGAGGTCAGAAGGGGGCGGGAGACAATGGCGTaGTCCATGCTGTTGGTGACA | + |
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Preference number: 4 (lower is better) Translates to: MYQYTLHSCLVPVEVRRGRETMA*SMLLVT Trigger: TGTCACCAACAGCATGGAGCACGCCATTGTCTCCCG...CCCCCTTCTGACCTCCACAGGTACCAAGCATGAATGTAATGTGTATTGATACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS-3UTR CCA 90 bp | GTCCTTAGTACACAATTCATAGTTCTGGGCTCTGCCTCACTCAGGTTTATTGAATGGTCCCTCACCCACTaGGCTGCTTCCTTGACGTTC | + |
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Preference number: 4 (lower is better) Translates to: VLSTQFIVLGSASLRFIEWSLTH*AASLTF Trigger: GAACGTCAAGGAAGCAGCCCAGTGGGTGAGGGACCA...TTCAATAAACCTGAGTGAGGCAGAGCCCAGAACTATGAATTGTGTACTAAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS-3UTR TCA 90 bp | ATGTATCAATACACATTACATTCATGCTTGGTACCTGTGGAGGTCAGAAGGGGGGCAGCATGTTCAGAGTaGCATCAATCAGCCCCACCA | + |
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Preference number: 4 (lower is better) Translates to: MYQYTLHSCLVPVEVRRGAACSE*HQSAPP Trigger: TGGTGGGGCTGATTGATGTCACTCTGAACATGCTGC...CCCCCTTCTGACCTCCACAGGTACCAAGCATGAATGTAATGTGTATTGATACAT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS-3UTR GCA 90 bp | AAATCCTCCTGTCTTAGCCCCATAAATGTTGGGATTACAAACATGAGATACCATCCTCACCCACTGGGCTaGTTCCTTGACGTTCTCCGA | + |
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Preference number: 4 (lower is better) Translates to: KSSCLSPINVGITNMRYHPHPLG*FLDVLR Trigger: TCGGAGAACGTCAAGGAAGCAGCCCAGTGGGTGAGG...ATGGTATCTCATGTTTGTAATCCCAACATTTATGGGGCTAAGACAGGAGGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| 3UTR CAA 72 bp | TTACATATTCCATATATACACAAACCAGTGCCTGCTTaGAGAGCTGTGGGGAGGGGACCGAGATTCTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: LHIPYIHKPVPA*RAVGRGPRFSC Trigger: ACAGGAGAATCTCGGTCCCCTCCCCACAGCTCTCAAAGCAGGCACTGGTTTGTGTATATATGGAATATGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| 3UTR CAA 72 bp | AACAGTTCATCACCTGCTGCTGGAAAAGGGTTCTGTTaGTTTGACCACTTAGCTGGGTGCCTTGGCGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: NSSSPAAGKGFC*FDHLAGCLGEN Trigger: ATTTTCGCCAAGGCACCCAGCTAAGTGGTCAAACAAACAGAACCCTTTTCCAGCAGCAGGTGATGAACTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS-3UTR CCA 90 bp | GTCCTTAGTACACAATTCATAGTTCTGGGCTCTGCCTCACTCAGGTTTATTGAACTTCTTGGCCCAGAATaGATGTCTTGTAGTTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: VLSTQFIVLGSASLRFIELLGPE*MSCSSL Trigger: CAGGGAACTACAAGACATCCATTCTGGGCCAAGAAG...TTCAATAAACCTGAGTGAGGCAGAGCCCAGAACTATGAATTGTGTACTAAGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS-3UTR CCA 90 bp | ATGTTACATATTCCATATATACACAAACCAGTGCCTGCTTTGAGAGCTGTGGGGGATTCCAGAGCTTCTTaGCCCAGAATGGATGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: MLHIPYIHKPVPALRAVGDSRAS*PRMDVL Trigger: CAAGACATCCATTCTGGGCCAAGAAGCTCTGGAATC...CCCCACAGCTCTCAAAGCAGGCACTGGTTTGTGTATATATGGAATATGTAACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| 3UTR CAA 72 bp | GGTCCTTCAAATTTCCTTTTTCTGATCTTTGTCCCCTaGGTCACTGTCCTATCTCTGCTGCTAGCTACTGTA | + |
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Preference number: 4 (lower is better) Translates to: GPSNFLFLIFVP*VTVLSLLLATV Trigger: TACAGTAGCTAGCAGCAGAGATAGGACAGTGACCAAGGGGACAAAGATCAGAAAAAGGAAATTTGAAGGACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS-3UTR CCA 90 bp | GTCCTTAGTACACAATTCATAGTTCTGGGCTCTGCCTCACTCAGGTTTATTGAATGTCTTGTAGTTCCCTaGCTCAATGATGCTGACCTT | + |
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Preference number: 4 (lower is better) Translates to: VLSTQFIVLGSASLRFIECLVVP*LNDADL Trigger: AAGGTCAGCATCATTGAGCCAGGGAACTACAAGACA...TTCAATAAACCTGAGTGAGGCAGAGCCCAGAACTATGAATTGTGTACTAAGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS-3UTR TCA 90 bp | AAATCCTCCTGTCTTAGCCCCATAAATGTTGGGATTACAAACATGAGATACCATCCACCAGGTTTATGTTaGTCACTTTCACAAAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: KSSCLSPINVGITNMRYHPPGLC*SLSQSL Trigger: AAGACTTTGTGAAAGTGATCAACATAAACCTGGTGG...ATGGTATCTCATGTTTGTAATCCCAACATTTATGGGGCTAAGACAGGAGGATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| 3UTR CAA 72 bp | TTAAAACCTTCTCTGAGTATGCTCTGGCAGTTCTTGTaGCCATGTTACATATTCCATATATACACAAACCAG | + |
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Preference number: 4 (lower is better) Translates to: LKPSLSMLWQFL*PCYIFHIYTNQ Trigger: CTGGTTTGTGTATATATGGAATATGTAACATGGCAACAAGAACTGCCAGAGCATACTCAGAGAAGGTTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| 3UTR CAA 72 bp | TATTTAAAACCTTCTCTGAGTATGCTCTGGCAGTTCTaGTTGCCATGTTACATATTCCATATATACACAAAC | + |
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Preference number: 4 (lower is better) Translates to: YLKPSLSMLWQF*LPCYIFHIYTN Trigger: GTTTGTGTATATATGGAATATGTAACATGGCAACAAGAACTGCCAGAGCATACTCAGAGAAGGTTTTAAATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS CCA 90 bp | ACCAGGGCCCAGAGGCCTTGCTCGCCCACTTGGTCCCTCACCCACTaGGCTGCTTCCTTGACGTTCTCCGACTTGGTGACATCTAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: TRAQRPCSPTWSLTH*AASLTFSDLVTSRR Trigger: CCTCCTAGATGTCACCAAGTCGGAGAACGTCAAGGAAGCAGCCCAGTGGGTGAGGGACCAAGTGGGCGAGCAAGGCCTCTGGGCCCTGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS-3UTR CAA 90 bp | CATCAGCCGGGGTCACATCAGGTTTCTAGAGGCCCCAGCAGATGGAAGGAGACACAGGGCCCAGAGGCCTaGCTCGCCCACTTGGTCCCT | + |
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Preference number: 5 (lower is better) Translates to: HQPGSHQVSRGPSRWKETQGPEA*LAHLVP Trigger: AGGGACCAAGTGGGCGAGCAAGGCCTCTGGGCCCTG...TGTCTCCTTCCATCTGCTGGGGCCTCTAGAAACCTGATGTGACCCCGGCTGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS-3UTR CAA 90 bp | GCACTAGTACCTGCCTTGGTGAGGGGTGTCTTGCGGCCTATGCTGCAACGCTCTCCAGAGCTGGACATGTaGACCACCCTGCCCCGGGCT | + |
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Preference number: 5 (lower is better) Translates to: ALVPALVRGVLRPMLQRSPELDM*TTLPRA Trigger: AGCCCGGGGCAGGGTGGTCAACATGTCCAGCTCTGG...AGAGCGTTGCAGCATAGGCCGCAAGACACCCCTCACCAAGGCAGGTACTAGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS-3UTR CAA 90 bp | GCACTAGTACCTGCCTTGGTGAGGGGTGTCTTGCGGCCTATGCTGCAACGCTCTCTGCCCCGGGCTTTCTaGATCATCGGCAGCATGTTC | + |
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Preference number: 5 (lower is better) Translates to: ALVPALVRGVLRPMLQRSLPRAF*IIGSMF Trigger: GAACATGCTGCCGATGATCAAGAAAGCCCGGGGCAG...AGAGCGTTGCAGCATAGGCCGCAAGACACCCCTCACCAAGGCAGGTACTAGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS CCA 90 bp | TCACTTTCACAAAGTCTTTTATGGTCAGCCATTCGTTGGGACCACTaGGCAGGCCCACGCCAGCGTTGTTCACCAGGGCCCAGAGGCCTT | + |
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Preference number: 5 (lower is better) Translates to: SLSQSLLWSAIRWDH*AGPRQRCSPGPRGL Trigger: AAGGCCTCTGGGCCCTGGTGAACAACGCTGGCGTGGGCCTGCCCAGTGGTCCCAACGAATGGCTGACCATAAAAGACTTTGTGAAAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS TCA 90 bp | ATCCCGGGTCTCCTGTGGCAGCCGATCCCACAGCTTCTTCATGCGTaGTTCCAGAGCTTCTTGGCCCAGAATGGATGTCTTGTAGTTCCC | + |
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Preference number: 5 (lower is better) Translates to: IPGLLWQPIPQLLHA*FQSFLAQNGCLVVP Trigger: GGGAACTACAAGACATCCATTCTGGGCCAAGAAGCTCTGGAATCACGCATGAAGAAGCTGTGGGATCGGCTGCCACAGGAGACCCGGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS-3UTR CAA 90 bp | ACAACACCTCTTGTGATCCCCCAGTCCTTTGCCCTCTCCCCTGTGCTCCACTGGCTATCAACCAGTTGTTaGGCCAACAGGTTCCCAAAG | + |
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Preference number: 5 (lower is better) Translates to: TTPLVIPQSFALSPVLHWLSTSC*ANRFPK Trigger: CTTTGGGAACCTGTTGGCCAAACAACTGGTTGATAG...CCAGTGGAGCACAGGGGAGAGGGCAAAGGACTGGGGGATCACAAGAGGTGTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS-3UTR CAA 90 bp | CTTGGTACCTGTGGAGGTCAGAAGGGGGCATCCGATCCCCTGGAACTGGAATTAGCGTGCTCCATGCTGTaGGTGACATCGCTGATTCTT | + |
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Preference number: 5 (lower is better) Translates to: LGTCGGQKGASDPLELELACSML*VTSLIL Trigger: AAGAATCAGCGATGTCACCAACAGCATGGAGCACGC...TAATTCCAGTTCCAGGGGATCGGATGCCCCCTTCTGACCTCCACAGGTACCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS-3UTR CAA 90 bp | AAATCCTCCTGTCTTAGCCCCATAAATGTTGGGATTACAAACATGAGATACCATATGGTCAGCCATTCGTaGGGACCACTGGGCAGGCCC | + |
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Preference number: 5 (lower is better) Translates to: KSSCLSPINVGITNMRYHMVSHS*GPLGRP Trigger: GGGCCTGCCCAGTGGTCCCAACGAATGGCTGACCAT...ATGGTATCTCATGTTTGTAATCCCAACATTTATGGGGCTAAGACAGGAGGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS-3UTR CAA 90 bp | ATGTTACATATTCCATATATACACAAACCAGTGCCTGCTTTGAGAGCTGTGGGGTTGACGTTCTCCGACTaGGTGACATCTAGGAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: MLHIPYIHKPVPALRAVGLTFSD*VTSRRK Trigger: CTTCCTCCTAGATGTCACCAAGTCGGAGAACGTCAA...CCCCACAGCTCTCAAAGCAGGCACTGGTTTGTGTATATATGGAATATGTAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS TCA 90 bp | GGCGTGCTCCATGCTGTTGGTGACATCGCTGATTCTTGGCTCTGCTaGCCTCATCAAGTTAACCAACTTTTTAGTATAGGTTTGGAAATA | + |
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Preference number: 5 (lower is better) Translates to: GVLHAVGDIADSWLC*PHQVNQLFSIGLEI Trigger: TATTTCCAAACCTATACTAAAAAGTTGGTTAACTTGATGAGGTCAGCAGAGCCAAGAATCAGCGATGTCACCAACAGCATGGAGCACGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS-3UTR CAA 90 bp | ATGTATCAATACACATTACATTCATGCTTGGTACCTGTGGAGGTCAGAAGGGGGACCAGATTGCAATTTTaGAACCAGCGGTACATAAAA | + |
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Preference number: 5 (lower is better) Translates to: MYQYTLHSCLVPVEVRRGTRLQF*NQRYIK Trigger: TTTTATGTACCGCTGGTTCAAAAATTGCAATCTGGT...CCCCCTTCTGACCTCCACAGGTACCAAGCATGAATGTAATGTGTATTGATACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS CAA 72 bp | CATTCGTTGGGACCACTGGGCAGGCCCACGCCAGCGTaGTTCACCAGGGCCCAGAGGCCTTGCTCGCCCACT | + |
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Preference number: 6 (lower is better) Translates to: HSLGPLGRPTPA*FTRAQRPCSPT Trigger: AGTGGGCGAGCAAGGCCTCTGGGCCCTGGTGAACAACGCTGGCGTGGGCCTGCCCAGTGGTCCCAACGAATG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS CAA 90 bp | ATGGTCAGCCATTCGTTGGGACCACTGGGCAGGCCCACGCCAGCGTaGTTCACCAGGGCCCAGAGGCCTTGCTCGCCCACTTGGTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: MVSHSLGPLGRPTPA*FTRAQRPCSPTWSL Trigger: GAGGGACCAAGTGGGCGAGCAAGGCCTCTGGGCCCTGGTGAACAACGCTGGCGTGGGCCTGCCCAGTGGTCCCAACGAATGGCTGACCAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS CCA 72 bp | CAGAGGCCTTGCTCGCCCACTTGGTCCCTCACCCACTaGGCTGCTTCCTTGACGTTCTCCGACTTGGTGACA | + |
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Preference number: 6 (lower is better) Translates to: QRPCSPTWSLTH*AASLTFSDLVT Trigger: TGTCACCAAGTCGGAGAACGTCAAGGAAGCAGCCCAGTGGGTGAGGGACCAAGTGGGCGAGCAAGGCCTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS CCA 72 bp | CAAAGTCTTTTATGGTCAGCCATTCGTTGGGACCACTaGGCAGGCCCACGCCAGCGTTGTTCACCAGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: QSLLWSAIRWDH*AGPRQRCSPGP Trigger: GGGCCCTGGTGAACAACGCTGGCGTGGGCCTGCCCAGTGGTCCCAACGAATGGCTGACCATAAAAGACTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS TCA 72 bp | CCTGGCTCAATGATGCTGACCTTCACCCCGAAGAAATaGAGCTCGCGCCTGATGCTATCAGAGAAGGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: PGSMMLTFTPKK*SSRLMLSEKAS Trigger: TGAAGCCTTCTCTGATAGCATCAGGCGCGAGCTTCATTTCTTCGGGGTGAAGGTCAGCATCATTGAGCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS CCA 72 bp | TCACTTTCACAAAGTCTTTTATGGTCAGCCATTCGTTaGGACCACTGGGCAGGCCCACGCCAGCGTTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: SLSQSLLWSAIR*DHWAGPRQRCS Trigger: TGAACAACGCTGGCGTGGGCCTGCCCAGTGGTCCCAACGAATGGCTGACCATAAAAGACTTTGTGAAAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS CAA 72 bp | ATCACTTTCACAAAGTCTTTTATGGTCAGCCATTCGTaGGGACCACTGGGCAGGCCCACGCCAGCGTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: ITFTKSFMVSHS*GPLGRPTPALF Trigger: GAACAACGCTGGCGTGGGCCTGCCCAGTGGTCCCAACGAATGGCTGACCATAAAAGACTTTGTGAAAGTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS CAA 90 bp | TTTATGTTGATCACTTTCACAAAGTCTTTTATGGTCAGCCATTCGTaGGGACCACTGGGCAGGCCCACGCCAGCGTTGTTCACCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: FMLITFTKSFMVSHS*GPLGRPTPALFTRA Trigger: GGCCCTGGTGAACAACGCTGGCGTGGGCCTGCCCAGTGGTCCCAACGAATGGCTGACCATAAAAGACTTTGTGAAAGTGATCAACATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS CCA 72 bp | AGCTTCTTGGCCCAGAATGGATGTCTTGTAGTTCCCTaGCTCAATGATGCTGACCTTCACCCCGAAGAAATG | + |
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Preference number: 6 (lower is better) Translates to: SFLAQNGCLVVP*LNDADLHPEEM Trigger: CATTTCTTCGGGGTGAAGGTCAGCATCATTGAGCCAGGGAACTACAAGACATCCATTCTGGGCCAAGAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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| CDS CAA 90 bp | GGCAGCATGTTCAGAGTGACATCAATCAGCCCCACCAGGTTTATGTaGATCACTTTCACAAAGTCTTTTATGGTCAGCCATTCGTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: GSMFRVTSISPTRFM*ITFTKSFMVSHSLG Trigger: TCCCAACGAATGGCTGACCATAAAAGACTTTGTGAAAGTGATCAACATAAACCTGGTGGGGCTGATTGATGTCACTCTGAACATGCTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047134.8 |
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