Pregenerated sensors for SDR42E1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034308Ensembl transcript IDs: ENSMUST00000037955.14, ENSMUST00000173522.8, ENSMUST00000174450.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGCTGGTGGGCAACCAAGAGCATTGGCCACAGCCAATACTGCTTTaGAGGTCTCAGGAGTCTCCCCCATCAACCACTCATCAGGAGGTA | + |
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Preference number: 1 (lower is better) Translates to: LLVGNQEHWPQPILL*RSQESPPSTTHQEV Trigger: TACCTCCTGATGAGTGGTTGATGGGGGAGACTCCTGAGACCTCCAAAGCAGTATTGGCTGTGGCCAATGCTCTTGGTTGCCCACCAGCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| 3UTR CCA 90 bp | GTGTATGGCACCTTAGGCAATAGAGTCTTACTAGCTAGTTGCTGGTaGGCAACCAAGAGCATTGGCCACAGCCAATACTGCTTTGGAGGT | + |
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Preference number: 1 (lower is better) Translates to: VYGTLGNRVLLASCW*ATKSIGHSQYCFGG Trigger: ACCTCCAAAGCAGTATTGGCTGTGGCCAATGCTCTTGGTTGCCCACCAGCAACTAGCTAGTAAGACTCTATTGCCTAAGGTGCCATACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| 3UTR CCA 90 bp | AAGGTGTATGGCACCTTAGGCAATAGAGTCTTACTAGCTAGTTGCTaGTGGGCAACCAAGAGCATTGGCCACAGCCAATACTGCTTTGGA | + |
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Preference number: 1 (lower is better) Translates to: KVYGTLGNRVLLASC*WATKSIGHSQYCFG Trigger: TCCAAAGCAGTATTGGCTGTGGCCAATGCTCTTGGTTGCCCACCAGCAACTAGCTAGTAAGACTCTATTGCCTAAGGTGCCATACACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| 3UTR CCA 90 bp | GAGTCCTGTGAGGCTATGAGGGAGGCTAATAGGGTGTCTTGTCTATaGATGAACACTCAACACTCAGCACTTGGACCGGATATGAATCTC | + |
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Preference number: 1 (lower is better) Translates to: ESCEAMREANRVSCL*MNTQHSALGPDMNL Trigger: GAGATTCATATCCGGTCCAAGTGCTGAGTGTTGAGTGTTCATCCATAGACAAGACACCCTATTAGCCTCCCTCATAGCCTCACAGGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| 3UTR CCA 90 bp | GTGTGTGTGTCCCAGAGAGTTTCACTAAGCTTGCTTACAGGGGCATaGGGCAATTCAGAAGTTACGAAACCACTAGAGAAAGTGTCTCCC | + |
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Preference number: 1 (lower is better) Translates to: VCVSQRVSLSLLTGA*GNSEVTKPLEKVSP Trigger: GGGAGACACTTTCTCTAGTGGTTTCGTAACTTCTGAATTGCCCCATGCCCCTGTAAGCAAGCTTAGTGAAACTCTCTGGGACACACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| 3UTR TCA 90 bp | GAATGGTACCAGATAATGAGACACATCTTTCAAAACCTGCATCTTTaGACCCATCCCAGGAAGGAGGCTCAGCTCCTGTGGATAGCTTTC | + |
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Preference number: 1 (lower is better) Translates to: EWYQIMRHIFQNLHL*THPRKEAQLLWIAF Trigger: GAAAGCTATCCACAGGAGCTGAGCCTCCTTCCTGGGATGGGTTCAAAGATGCAGGTTTTGAAAGATGTGTCTCATTATCTGGTACCATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCGATCCGATTCACCCCCACACCCTCTTTTGTCCCATTCCCAGTCTCTTCCCCAGCCAATACTGCTTTaGAGGTCTCAGGAGTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: VRSDSPPHPLLSHSQSLPQPILL*RSQESP Trigger: GGGAGACTCCTGAGACCTCCAAAGCAGTATTGGCTG...GGGAAGAGACTGGGAATGGGACAAAAGAGGGTGTGGGGGTGAATCGGATCGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGGTGGGCAACCAAGAGCATTGGCCACAGCCAATACTGCTTTGGAGGTCTCACAAAACCTGCATCTTTaGACCCATCCCAGGAAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: AGGQPRALATANTALEVSQNLHL*THPRKE Trigger: CTCCTTCCTGGGATGGGTTCAAAGATGCAGGTTTTG...TGAGACCTCCAAAGCAGTATTGGCTGTGGCCAATGCTCTTGGTTGCCCACCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGAAAGTGTCTCCCGCTCCCCAGAAACCACCAGTCACCTCAGCTTTTCAGGGAAGACTCCAGTAGCCTaGATAGACCCTTCTGGAACT | + |
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Preference number: 2 (lower is better) Translates to: RESVSRSPETTSHLSFSGKTPVA*IDPSGT Trigger: AGTTCCAGAAGGGTCTATGCAGGCTACTGGAGTCTT...CCCTGAAAAGCTGAGGTGACTGGTGGTTTCTGGGGAGCGGGAGACACTTTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| 3UTR-3UTR GCA 90 bp | ATCGAGCTTCTCCCCTTCCCATGGCAGGATGGTGATAGGCCTCAGCGTATGAGTCAGACATATCGCTGTTaGACTAGAGGGTACACCTTT | + |
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Preference number: 2 (lower is better) Translates to: IELLPFPWQDGDRPQRMSQTYRC*TRGYTF Trigger: AAAGGTGTACCCTCTAGTGCAACAGCGATATGTCTG...ACTCATACGCTGAGGCCTATCACCATCCTGCCATGGGAAGGGGAGAAGCTCGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCAGGGAGGAGTAGGTATCGAGCTTCTCCCCTTCCCATGGCAGGATGGTGATTGTCTTGTCTATGGATaGACACTCAACACTCAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: FQGGVGIELLPFPWQDGDCLVYG*TLNTQH Trigger: GTGCTGAGTGTTGAGTGTTCATCCATAGACAAGACA...ATCACCATCCTGCCATGGGAAGGGGAGAAGCTCGATACCTACTCCTCCCTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| 3UTR-3UTR CCA 90 bp | AATTCAGAAGTTACGAAACCACTAGAGAAAGTGTCTCCCGCTCCCCAGAAACCACTTCTCCCCTTCCCATaGCAGGATGGTGATAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: NSEVTKPLEKVSPAPQKPLLPFP*QDGDRP Trigger: AGGCCTATCACCATCCTGCCATGGGAAGGGGAGAAG...TGGTTTCTGGGGAGCGGGAGACACTTTCTCTAGTGGTTTCGTAACTTCTGAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| 3UTR-3UTR TCA 90 bp | AATTCAGAAGTTACGAAACCACTAGAGAAAGTGTCTCCCGCTCCCCAGAAACCAAGTCCTGTGAGGCTATaGGGGAGGCTAATAGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: NSEVTKPLEKVSPAPQKPSPVRL*GRLIGC Trigger: ACACCCTATTAGCCTCCCTCATAGCCTCACAGGACT...TGGTTTCTGGGGAGCGGGAGACACTTTCTCTAGTGGTTTCGTAACTTCTGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGGTGGGCAACCAAGAGCATTGGCCACAGCCAATACTGCTTTGGAGGTCTCAACATCTTTCAAAACCTaGATCTTTGAACCCATCCCA | + |
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Preference number: 2 (lower is better) Translates to: AGGQPRALATANTALEVSTSFKT*IFEPIP Trigger: TGGGATGGGTTCAAAGATGCAGGTTTTGAAAGATGT...TGAGACCTCCAAAGCAGTATTGGCTGTGGCCAATGCTCTTGGTTGCCCACCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| 3UTR-3UTR CCA 90 bp | AATTCAGAAGTTACGAAACCACTAGAGAAAGTGTCTCCCGCTCCCCAGAAACCAAAACTCTCCCTCCCATaGAGCCAGCCTCCAGTTCAA | + |
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Preference number: 2 (lower is better) Translates to: NSEVTKPLEKVSPAPQKPKLSLP*SQPPVQ Trigger: TTGAACTGGAGGCTGGCTCCATGGGAGGGAGAGTTT...TGGTTTCTGGGGAGCGGGAGACACTTTCTCTAGTGGTTTCGTAACTTCTGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| 3UTR-3UTR GCA 90 bp | AATTCAGAAGTTACGAAACCACTAGAGAAAGTGTCTCCCGCTCCCCAGAAACCACCTTCCTCCAGCTTTTaGGTCCTTCCTACCCCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: NSEVTKPLEKVSPAPQKPPSSSF*VLPTPF Trigger: AAAAGGGGTAGGAAGGACGCAAAAGCTGGAGGAAGG...TGGTTTCTGGGGAGCGGGAGACACTTTCTCTAGTGGTTTCGTAACTTCTGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| 3UTR CAA 90 bp | GGAATGGTACCAGATAATGAGACACATCTTTCAAAACCTGCATCTTaGAACCCATCCCAGGAAGGAGGCTCAGCTCCTGTGGATAGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: GMVPDNETHLSKPAS*NPSQEGGSAPVDSF Trigger: AAAGCTATCCACAGGAGCTGAGCCTCCTTCCTGGGATGGGTTCAAAGATGCAGGTTTTGAAAGATGTGTCTCATTATCTGGTACCATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| 3UTR-3UTR CCA 90 bp | TTTTGTCCCATTCCCAGTCTCTTCCCAACTAGATTCCTGTCTAAACTGTGTGTAAAACTCTCCCTCCCATaGAGCCAGCCTCCAGTTCAA | + |
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Preference number: 2 (lower is better) Translates to: FCPIPSLFPTRFLSKLCVKLSLP*SQPPVQ Trigger: TTGAACTGGAGGCTGGCTCCATGGGAGGGAGAGTTT...TACACACAGTTTAGACAGGAATCTAGTTGGGAAGAGACTGGGAATGGGACAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| 3UTR-3UTR CCA 90 bp | TTTTGTCCCATTCCCAGTCTCTTCCCAACTAGATTCCTGTCTAAACTGTGTGTAGGCAACCAAGAGCATTaGCCACAGCCAATACTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: FCPIPSLFPTRFLSKLCVGNQEH*PQPILL Trigger: AAGCAGTATTGGCTGTGGCCAATGCTCTTGGTTGCC...TACACACAGTTTAGACAGGAATCTAGTTGGGAAGAGACTGGGAATGGGACAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| 3UTR-3UTR TCA 90 bp | TTTTGTCCCATTCCCAGTCTCTTCCCAACTAGATTCCTGTCTAAACTGTGTGTAACCCTTCTGGAACTATaGAATCTAGCAAGCAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: FCPIPSLFPTRFLSKLCVTLLEL*NLASRQ Trigger: CTGCCTGCTTGCTAGATTTCATAGTTCCAGAAGGGT...TACACACAGTTTAGACAGGAATCTAGTTGGGAAGAGACTGGGAATGGGACAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| 3UTR-3UTR CCA 90 bp | AATTCAGAAGTTACGAAACCACTAGAGAAAGTGTCTCCCGCTCCCCAGAAACCAAGGGTGTCTTGTCTATaGATGAACACTCAACACTCA | + |
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Preference number: 2 (lower is better) Translates to: NSEVTKPLEKVSPAPQKPRVSCL*MNTQHS Trigger: TGAGTGTTGAGTGTTCATCCATAGACAAGACACCCT...TGGTTTCTGGGGAGCGGGAGACACTTTCTCTAGTGGTTTCGTAACTTCTGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTGTCCCATTCCCAGTCTCTTCCCAACTAGATTCCTGTCTAAACTGTGTGTAACATCTTTCAAAACCTaGATCTTTGAACCCATCCCA | + |
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Preference number: 2 (lower is better) Translates to: FCPIPSLFPTRFLSKLCVTSFKT*IFEPIP Trigger: TGGGATGGGTTCAAAGATGCAGGTTTTGAAAGATGT...TACACACAGTTTAGACAGGAATCTAGTTGGGAAGAGACTGGGAATGGGACAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| 3UTR GCA 72 bp | TGGTGGGCAACCAAGAGCATTGGCCACAGCCAATACTaGTTTGGAGGTCTCAGGAGTCTCCCCCATCAACCA | + |
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Preference number: 3 (lower is better) Translates to: WWATKSIGHSQY*FGGLRSLPHQP Trigger: TGGTTGATGGGGGAGACTCCTGAGACCTCCAAAGCAGTATTGGCTGTGGCCAATGCTCTTGGTTGCCCACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| 3UTR-3UTR CAA 90 bp | AGAGAAAGTGTCTCCCGCTCCCCAGAAACCACCAGTCACCTCAGCTTTTCAGGGACCTTCCTCCAGCTTTaGCGTCCTTCCTACCCCTTT | + |
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Preference number: 3 (lower is better) Translates to: RESVSRSPETTSHLSFSGTFLQL*RPSYPF Trigger: AAAGGGGTAGGAAGGACGCAAAAGCTGGAGGAAGGT...CCCTGAAAAGCTGAGGTGACTGGTGGTTTCTGGGGAGCGGGAGACACTTTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| 3UTR CCA 72 bp | GGCACCTTAGGCAATAGAGTCTTACTAGCTAGTTGCTaGTGGGCAACCAAGAGCATTGGCCACAGCCAATAC | + |
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Preference number: 3 (lower is better) Translates to: GTLGNRVLLASC*WATKSIGHSQY Trigger: GTATTGGCTGTGGCCAATGCTCTTGGTTGCCCACCAGCAACTAGCTAGTAAGACTCTATTGCCTAAGGTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| 3UTR GCA 72 bp | TATGGCACCTTAGGCAATAGAGTCTTACTAGCTAGTTaGTGGTGGGCAACCAAGAGCATTGGCCACAGCCAA | + |
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Preference number: 3 (lower is better) Translates to: YGTLGNRVLLAS*WWATKSIGHSQ Trigger: TTGGCTGTGGCCAATGCTCTTGGTTGCCCACCAGCAACTAGCTAGTAAGACTCTATTGCCTAAGGTGCCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| 3UTR CCA 72 bp | ACCTTAGGCAATAGAGTCTTACTAGCTAGTTGCTGGTaGGCAACCAAGAGCATTGGCCACAGCCAATACTGC | + |
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Preference number: 3 (lower is better) Translates to: TLGNRVLLASCW*ATKSIGHSQYC Trigger: GCAGTATTGGCTGTGGCCAATGCTCTTGGTTGCCCACCAGCAACTAGCTAGTAAGACTCTATTGCCTAAGGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| 3UTR-3UTR CAA 90 bp | AATTCAGAAGTTACGAAACCACTAGAGAAAGTGTCTCCCGCTCCCCAGAAACCAACAGCCAATACTGCTTaGGAGGTCTCAGGAGTCTCC | + |
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Preference number: 3 (lower is better) Translates to: NSEVTKPLEKVSPAPQKPTANTA*EVSGVS Trigger: GGAGACTCCTGAGACCTCCAAAGCAGTATTGGCTGT...TGGTTTCTGGGGAGCGGGAGACACTTTCTCTAGTGGTTTCGTAACTTCTGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| 3UTR TCA 72 bp | CAGATAATGAGACACATCTTTCAAAACCTGCATCTTTaGACCCATCCCAGGAAGGAGGCTCAGCTCCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: QIMRHIFQNLHL*THPRKEAQLLW Trigger: CCACAGGAGCTGAGCCTCCTTCCTGGGATGGGTTCAAAGATGCAGGTTTTGAAAGATGTGTCTCATTATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| 3UTR GCA 72 bp | ATGCAGGGTCCACGGCTGAATAAGACTCCAGTAGCCTaGATAGACCCTTCTGGAACTATGAAATCTAGCAAG | + |
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Preference number: 3 (lower is better) Translates to: MQGPRLNKTPVA*IDPSGTMKSSK Trigger: CTTGCTAGATTTCATAGTTCCAGAAGGGTCTATGCAGGCTACTGGAGTCTTATTCAGCCGTGGACCCTGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| 3UTR-3UTR CAA 90 bp | AATTCAGAAGTTACGAAACCACTAGAGAAAGTGTCTCCCGCTCCCCAGAAACCACACCTTTTCCCAGTATaGATAGTGCTGTATGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: NSEVTKPLEKVSPAPQKPHLFPV*IVLYAG Trigger: CCCTGCATACAGCACTATCAATACTGGGAAAAGGTG...TGGTTTCTGGGGAGCGGGAGACACTTTCTCTAGTGGTTTCGTAACTTCTGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| 3UTR CCA 72 bp | GTCTTGTCTATGGATGAACACTCAACACTCAGCACTTaGACCGGATATGAATCTCAGAAGTATAACTGGTGC | + |
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Preference number: 3 (lower is better) Translates to: VLSMDEHSTLST*TGYESQKYNWC Trigger: GCACCAGTTATACTTCTGAGATTCATATCCGGTCCAAGTGCTGAGTGTTGAGTGTTCATCCATAGACAAGAC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| CDS-3UTR TCA 90 bp | AAGTGTCTCCCGCTCCCCAGAAACCACCAGTCACCTCAGCTTTTCAGGGAGGAGATAAACTCCGAGTCTTaGCCCGCAGCCCCTCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: KCLPLPRNHQSPQLFREEINSES*PAAPRP Trigger: CGGCCGAGGGGCTGCGGGTCAAGACTCGGAGTTTAT...CTCCTCCCTGAAAAGCTGAGGTGACTGGTGGTTTCTGGGGAGCGGGAGACACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| CDS-3UTR CCA 90 bp | CGTAGTTCGATCCGATTCACCCCCACACCCTCTTTTGTCCCATTCCCAGTCTCTGGGCAGGCGGGTGGATaGGAATGTGTAGCCCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: RSSIRFTPTPSFVPFPVSGQAGG*ECVAQA Trigger: GGCCTGGGCTACACATTCCCATCCACCCGCCTGCCC...AGAGACTGGGAATGGGACAAAAGAGGGTGTGGGGGTGAATCGGATCGAACTACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| CDS-3UTR TCA 90 bp | GCTGGTGGGCAACCAAGAGCATTGGCCACAGCCAATACTGCTTTGGAGGTCTCAAAGCAAGGCAGTAGATaGGGGTTAGGGGCAGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: AGGQPRALATANTALEVSKQGSR*GLGAGG Trigger: CCCGCCTGCCCCTAACCCTCATCTACTGCCTTGCTT...TGAGACCTCCAAAGCAGTATTGGCTGTGGCCAATGCTCTTGGTTGCCCACCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| CDS-3UTR TCA 90 bp | GGACCGGATATGAATCTCAGAAGTATAACTGGTGCCCCTACGGCAGAGAGAAGCATAAACTCCGAGTCTTaGCCCGCAGCCCCTCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: GPDMNLRSITGAPTAERSINSES*PAAPRP Trigger: CGGCCGAGGGGCTGCGGGTCAAGACTCGGAGTTTAT...GCTTCTCTCTGCCGTAGGGGCACCAGTTATACTTCTGAGATTCATATCCGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| CDS-3UTR GCA 90 bp | CGTAGTTCGATCCGATTCACCCCCACACCCTCTTTTGTCCCATTCCCAGTCTCTACTATCCTGGGAAGATaGCTCTGCTCCCCAGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: RSSIRFTPTPSFVPFPVSTILGR*LCSPAP Trigger: CGGGGCTGGGGAGCAGAGGCATCTTCCCAGGATAGT...AGAGACTGGGAATGGGACAAAAGAGGGTGTGGGGGTGAATCGGATCGAACTACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| CDS-3UTR TCA 90 bp | GTTCGATCCGATTCACCCCCACACCCTCTTTTGTCCCATTCCCAGTCTCTTCCCGACCGGTCTACCATCTaGGATGAAGTAGGGCTGACC | + |
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Preference number: 4 (lower is better) Translates to: VRSDSPPHPLLSHSQSLPDRSTI*DEVGLT Trigger: GGTCAGCCCTACTTCATCTCAGATGGTAGACCGGTC...GGGAAGAGACTGGGAATGGGACAAAAGAGGGTGTGGGGGTGAATCGGATCGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| CDS-3UTR CCA 90 bp | GCTGGTGGGCAACCAAGAGCATTGGCCACAGCCAATACTGCTTTGGAGGTCTCACCCTCTGGAAGGTTCTaGGCTGGTTGGGTGATGTCA | + |
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Preference number: 4 (lower is better) Translates to: AGGQPRALATANTALEVSPSGRF*AGWVMS Trigger: TGACATCACCCAACCAGCCCAGAACCTTCCAGAGGG...TGAGACCTCCAAAGCAGTATTGGCTGTGGCCAATGCTCTTGGTTGCCCACCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| 3UTR CAA 72 bp | GGGCAACCAAGAGCATTGGCCACAGCCAATACTGCTTaGGAGGTCTCAGGAGTCTCCCCCATCAACCACTCA | + |
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Preference number: 4 (lower is better) Translates to: GQPRALATANTA*EVSGVSPINHS Trigger: TGAGTGGTTGATGGGGGAGACTCCTGAGACCTCCAAAGCAGTATTGGCTGTGGCCAATGCTCTTGGTTGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| CDS-3UTR TCA 90 bp | TTGCTGGTGGGCAACCAAGAGCATTGGCCACAGCCAATACTGCTTTGGAGGTCTGACCGGTCTACCATCTaGGATGAAGTAGGGCTGACC | + |
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Preference number: 4 (lower is better) Translates to: LLVGNQEHWPQPILLWRSDRSTI*DEVGLT Trigger: GGTCAGCCCTACTTCATCTCAGATGGTAGACCGGTC...AGACCTCCAAAGCAGTATTGGCTGTGGCCAATGCTCTTGGTTGCCCACCAGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| CDS-3UTR CCA 90 bp | GTTCGATCCGATTCACCCCCACACCCTCTTTTGTCCCATTCCCAGTCTCTTCCCTTGTGTAGACTAATCTaGGCACTCCTCTCTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: VRSDSPPHPLLSHSQSLPLCRLI*ALLSPG Trigger: GCCTGGAGAGAGGAGTGCCCAGATTAGTCTACACAA...GGGAAGAGACTGGGAATGGGACAAAAGAGGGTGTGGGGGTGAATCGGATCGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| CDS-3UTR TCA 90 bp | TTGCTGGTGGGCAACCAAGAGCATTGGCCACAGCCAATACTGCTTTGGAGGTCTCTCCGCAGACGAATTTaGTTCCCTCTGGAAGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LLVGNQEHWPQPILLWRSLRRRI*FPLEGS Trigger: AGAACCTTCCAGAGGGAATCAAATTCGTCTGCGGAG...AGACCTCCAAAGCAGTATTGGCTGTGGCCAATGCTCTTGGTTGCCCACCAGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| CDS-3UTR TCA 90 bp | CCGGATATGAATCTCAGAAGTATAACTGGTGCCCCTACGGCAGAGAGAAGCACCCCCCGTACACAAATCTaGACAGGCCCCTCTCAATGT | + |
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Preference number: 4 (lower is better) Translates to: PDMNLRSITGAPTAERSTPRTQI*TGPSQC Trigger: ACATTGAGAGGGGCCTGTTCAGATTTGTGTACGGGG...GGTGCTTCTCTCTGCCGTAGGGGCACCAGTTATACTTCTGAGATTCATATCCGG 52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| CDS-3UTR CCA 90 bp | CTTTCAAAACCTGCATCTTTGAACCCATCCCAGGAAGGAGGCTCAGCTCCTGTGTCTCTGCGATGGACTTaGTCCTGGAGTAGTGATCCG | + |
|
Preference number: 4 (lower is better) Translates to: LSKPASLNPSQEGGSAPVSLRWT*SWSSDP Trigger: CGGATCACTACTCCAGGACCAAGTCCATCGCAGAGA...CACAGGAGCTGAGCCTCCTTCCTGGGATGGGTTCAAAGATGCAGGTTTTGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS-3UTR CCA 90 bp | TTGCTGGTGGGCAACCAAGAGCATTGGCCACAGCCAATACTGCTTTGGAGGTCTTGTAACTCACTATCCTaGGAAGATGCCTCTGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLVGNQEHWPQPILLWRSCNSLS*EDASAP Trigger: GGGAGCAGAGGCATCTTCCCAGGATAGTGAGTTACA...AGACCTCCAAAGCAGTATTGGCTGTGGCCAATGCTCTTGGTTGCCCACCAGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS-3UTR CCA 90 bp | TTTCAGGGAGGAGTAGGTATCGAGCTTCTCCCCTTCCCATGGCAGGATGGTGATCAGGCCCTCGACCAGTaGCCTAAAGAACTCAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FQGGVGIELLPFPWQDGDQALDQ*PKELKV Trigger: AACTTTGAGTTCTTTAGGCCACTGGTCGAGGGCCTG...ATCACCATCCTGCCATGGGAAGGGGAGAAGCTCGATACCTACTCCTCCCTGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS-3UTR CCA 90 bp | TTTTGTCCCATTCCCAGTCTCTTCCCAACTAGATTCCTGTCTAAACTGTGTGTAGGGCAGGCGGGTGGATaGGAATGTGTAGCCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FCPIPSLFPTRFLSKLCVGQAGG*ECVAQA Trigger: GGCCTGGGCTACACATTCCCATCCACCCGCCTGCCC...TACACACAGTTTAGACAGGAATCTAGTTGGGAAGAGACTGGGAATGGGACAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS-3UTR TCA 90 bp | AGAGAAAGTGTCTCCCGCTCCCCAGAAACCACCAGTCACCTCAGCTTTTCAGGGCCATTTCTGATGACTTaGCCTCCAAAGATGACATTG | + |
|
Preference number: 4 (lower is better) Translates to: RESVSRSPETTSHLSFSGPFLMT*PPKMTL Trigger: CAATGTCATCTTTGGAGGTCAAGTCATCAGAAATGG...CCCTGAAAAGCTGAGGTGACTGGTGGTTTCTGGGGAGCGGGAGACACTTTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS-3UTR TCA 90 bp | AGAGAAAGTGTCTCCCGCTCCCCAGAAACCACCAGTCACCTCAGCTTTTCAGGGAGAACTCAAAGTTATTaGCCGGTCTACCATCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RESVSRSPETTSHLSFSGRTQSY*PVYHLR Trigger: TCTCAGATGGTAGACCGGTCAATAACTTTGAGTTCT...CCCTGAAAAGCTGAGGTGACTGGTGGTTTCTGGGGAGCGGGAGACACTTTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS-3UTR TCA 90 bp | TGGATGAACACTCAACACTCAGCACTTGGACCGGATATGAATCTCAGAAGTATAAAGCAAGGCAGTAGATaGGGGTTAGGGGCAGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: WMNTQHSALGPDMNLRSIKQGSR*GLGAGG Trigger: CCCGCCTGCCCCTAACCCTCATCTACTGCCTTGCTT...TATACTTCTGAGATTCATATCCGGTCCAAGTGCTGAGTGTTGAGTGTTCATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS-3UTR CCA 90 bp | AATAGGGTGTCTTGTCTATGGATGAACACTCAACACTCAGCACTTGGACCGGATCCCTCTGGAAGGTTCTaGGCTGGTTGGGTGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NRVSCLWMNTQHSALGPDPSGRF*AGWVMS Trigger: TGACATCACCCAACCAGCCCAGAACCTTCCAGAGGG...ATCCGGTCCAAGTGCTGAGTGTTGAGTGTTCATCCATAGACAAGACACCCTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS-3UTR TCA 90 bp | ACACATCTTTCAAAACCTGCATCTTTGAACCCATCCCAGGAAGGAGGCTCAGCTCTCCGCAGACGAATTTaGTTCCCTCTGGAAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: THLSKPASLNPSQEGGSALRRRI*FPLEGS Trigger: AGAACCTTCCAGAGGGAATCAAATTCGTCTGCGGAG...AGCTGAGCCTCCTTCCTGGGATGGGTTCAAAGATGCAGGTTTTGAAAGATGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTTGTCCCATTCCCAGTCTCTTCCCAACTAGATTCCTGTCTAAACTGTGTGTGGGTCTTGTTCAGTTaGTCCCTCCCAGACATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SFVPFPVSSQLDSCLNCVWVLFS*SLPDMP Trigger: CGGCATGTCTGGGAGGGAGCAACTGAACAAGACCCA...CACACAGTTTAGACAGGAATCTAGTTGGGAAGAGACTGGGAATGGGACAAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS-3UTR GCA 90 bp | AATAGGGTGTCTTGTCTATGGATGAACACTCAACACTCAGCACTTGGACCGGATCAGGACCTTCTTCTCTaGGATGGACTTGGTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NRVSCLWMNTQHSALGPDQDLLL*DGLGPG Trigger: TCCAGGACCAAGTCCATCGCAGAGAAGAAGGTCCTG...ATCCGGTCCAAGTGCTGAGTGTTGAGTGTTCATCCATAGACAAGACACCCTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS-3UTR GCA 90 bp | AATTCAGAAGTTACGAAACCACTAGAGAAAGTGTCTCCCGCTCCCCAGAAACCACAGGACCTTCTTCTCTaGGATGGACTTGGTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NSEVTKPLEKVSPAPQKPQDLLL*DGLGPG Trigger: TCCAGGACCAAGTCCATCGCAGAGAAGAAGGTCCTG...TGGTTTCTGGGGAGCGGGAGACACTTTCTCTAGTGGTTTCGTAACTTCTGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS-3UTR CCA 90 bp | AATTCAGAAGTTACGAAACCACTAGAGAAAGTGTCTCCCGCTCCCCAGAAACCATCTCTGCGATGGACTTaGTCCTGGAGTAGTGATCCG | + |
|
Preference number: 4 (lower is better) Translates to: NSEVTKPLEKVSPAPQKPSLRWT*SWSSDP Trigger: CGGATCACTACTCCAGGACCAAGTCCATCGCAGAGA...TGGTTTCTGGGGAGCGGGAGACACTTTCTCTAGTGGTTTCGTAACTTCTGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| 3UTR CAA 72 bp | CCAGATAATGAGACACATCTTTCAAAACCTGCATCTTaGAACCCATCCCAGGAAGGAGGCTCAGCTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PDNETHLSKPAS*NPSQEGGSAPV Trigger: CACAGGAGCTGAGCCTCCTTCCTGGGATGGGTTCAAAGATGCAGGTTTTGAAAGATGTGTCTCATTATCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS-3UTR CCA 90 bp | AATTCAGAAGTTACGAAACCACTAGAGAAAGTGTCTCCCGCTCCCCAGAAACCATGGAAGGTTCTGGGCTaGTTGGGTGATGTCAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: NSEVTKPLEKVSPAPQKPWKVLG*LGDVKQ Trigger: CTGTTTGACATCACCCAACCAGCCCAGAACCTTCCA...TGGTTTCTGGGGAGCGGGAGACACTTTCTCTAGTGGTTTCGTAACTTCTGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS-3UTR CCA 90 bp | ACACATCTTTCAAAACCTGCATCTTTGAACCCATCCCAGGAAGGAGGCTCAGCTGAATTTGATTCCCTCTaGAAGGTTCTGGGCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: THLSKPASLNPSQEGGSAEFDSL*KVLGWL Trigger: CAACCAGCCCAGAACCTTCCAGAGGGAATCAAATTC...AGCTGAGCCTCCTTCCTGGGATGGGTTCAAAGATGCAGGTTTTGAAAGATGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTTGTCCCATTCCCAGTCTCTTCCCAACTAGATTCCTGTCTAAACTGTGTGCGATGGACTTGGTCCTaGAGTAGTGATCCGGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SFVPFPVSSQLDSCLNCVRWTWS*SSDPGV Trigger: TACACCCGGATCACTACTCCAGGACCAAGTCCATCG...CACACAGTTTAGACAGGAATCTAGTTGGGAAGAGACTGGGAATGGGACAAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS-3UTR CCA 90 bp | AATTCAGAAGTTACGAAACCACTAGAGAAAGTGTCTCCCGCTCCCCAGAAACCATGTAACTCACTATCCTaGGAAGATGCCTCTGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NSEVTKPLEKVSPAPQKPCNSLS*EDASAP Trigger: GGGAGCAGAGGCATCTTCCCAGGATAGTGAGTTACA...TGGTTTCTGGGGAGCGGGAGACACTTTCTCTAGTGGTTTCGTAACTTCTGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS-3UTR CCA 90 bp | AATTCAGAAGTTACGAAACCACTAGAGAAAGTGTCTCCCGCTCCCCAGAAACCAAACTCAACCAGGCTCTaGGGATCCCCGTACACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: NSEVTKPLEKVSPAPQKPNSTRL*GSPYTN Trigger: ATTTGTGTACGGGGATCCCCAGAGCCTGGTTGAGTT...TGGTTTCTGGGGAGCGGGAGACACTTTCTCTAGTGGTTTCGTAACTTCTGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTTGTCCCATTCCCAGTCTCTTCCCAACTAGATTCCTGTCTAAACTGTGTGTTGTGTAGACTAATCTaGGCACTCCTCTCTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SFVPFPVSSQLDSCLNCVLCRLI*ALLSPG Trigger: GCCTGGAGAGAGGAGTGCCCAGATTAGTCTACACAA...CACACAGTTTAGACAGGAATCTAGTTGGGAAGAGACTGGGAATGGGACAAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS-3UTR CCA 90 bp | TTTTGTCCCATTCCCAGTCTCTTCCCAACTAGATTCCTGTCTAAACTGTGTGTACGATGGACTTGGTCCTaGAGTAGTGATCCGGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: FCPIPSLFPTRFLSKLCVRWTWS*SSDPGV Trigger: TACACCCGGATCACTACTCCAGGACCAAGTCCATCG...TACACACAGTTTAGACAGGAATCTAGTTGGGAAGAGACTGGGAATGGGACAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS-3UTR CCA 90 bp | TTTTGTCCCATTCCCAGTCTCTTCCCAACTAGATTCCTGTCTAAACTGTGTGTATGGAAGGTTCTGGGCTaGTTGGGTGATGTCAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: FCPIPSLFPTRFLSKLCVWKVLG*LGDVKQ Trigger: CTGTTTGACATCACCCAACCAGCCCAGAACCTTCCA...TACACACAGTTTAGACAGGAATCTAGTTGGGAAGAGACTGGGAATGGGACAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS-3UTR GCA 90 bp | TTAAGAAGTAATGTGAGGATCCAGGAATGGTACCAGATAATGAGACACATCTTTTGGGTCTTGTTCAGTTaGTCCCTCCCAGACATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LRSNVRIQEWYQIMRHIFWVLFS*SLPDMP Trigger: CGGCATGTCTGGGAGGGAGCAACTGAACAAGACCCA...AAAGATGTGTCTCATTATCTGGTACCATTCCTGGATCCTCACATTACTTCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTTGTCCCATTCCCAGTCTCTTCCCAACTAGATTCCTGTCTAAACTGTGTGCTGCCCACAATGAAGTaGGTCATCTCTACCAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SFVPFPVSSQLDSCLNCVLPTMK*VISTKK Trigger: TTTCTTGGTAGAGATGACCCACTTCATTGTGGGCAG...CACACAGTTTAGACAGGAATCTAGTTGGGAAGAGACTGGGAATGGGACAAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTTGTCCCATTCCCAGTCTCTTCCCAACTAGATTCCTGTCTAAACTGTGTGCCATTTCTGATGACTTaGCCTCCAAAGATGACATTG | + |
|
Preference number: 4 (lower is better) Translates to: SFVPFPVSSQLDSCLNCVPFLMT*PPKMTL Trigger: CAATGTCATCTTTGGAGGTCAAGTCATCAGAAATGG...CACACAGTTTAGACAGGAATCTAGTTGGGAAGAGACTGGGAATGGGACAAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS-3UTR CCA 90 bp | TGGATGAACACTCAACACTCAGCACTTGGACCGGATATGAATCTCAGAAGTATACTGCCCACAATGAAGTaGGTCATCTCTACCAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: WMNTQHSALGPDMNLRSILPTMK*VISTKK Trigger: TTTCTTGGTAGAGATGACCCACTTCATTGTGGGCAG...TATACTTCTGAGATTCATATCCGGTCCAAGTGCTGAGTGTTGAGTGTTCATCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS-3UTR CCA 90 bp | TTAAGAAGTAATGTGAGGATCCAGGAATGGTACCAGATAATGAGACACATCTTTAACTCAACCAGGCTCTaGGGATCCCCGTACACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LRSNVRIQEWYQIMRHIFNSTRL*GSPYTN Trigger: ATTTGTGTACGGGGATCCCCAGAGCCTGGTTGAGTT...AAAGATGTGTCTCATTATCTGGTACCATTCCTGGATCCTCACATTACTTCTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS CCA 90 bp | TATCCTGGGAAGATGCCTCTGCTCCCCAGCCCCGTAGATGCCGGCTaGCCTGATGGCGCAGGTCCGGAGTATACCATCGCCCTGCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: YPGKMPLLPSPVDAG*PDGAGPEYTIALLE Trigger: TTCAAGCAGGGCGATGGTATACTCCGGACCTGCGCCATCAGGCCAGCCGGCATCTACGGGGCTGGGGAGCAGAGGCATCTTCCCAGGATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS GCA 90 bp | ATGCCGGCTGGCCTGATGGCGCAGGTCCGGAGTATACCATCGCCCTaGTTGAAGGCCAAGCCATTGGCTTCCAGGACCTTCTTCTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: MPAGLMAQVRSIPSP*LKAKPLASRTFFSA Trigger: CGCAGAGAAGAAGGTCCTGGAAGCCAATGGCTTGGCCTTCAAGCAGGGCGATGGTATACTCCGGACCTGCGCCATCAGGCCAGCCGGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 ENSMUST00000174450.2 |
||
| CDS-3UTR CAA 90 bp | AGAGAAAGTGTCTCCCGCTCCCCAGAAACCACCAGTCACCTCAGCTTTTCAGGGTCTGTGCCACCCACGTaGACCTCTTCGATCTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RESVSRSPETTSHLSFSGSVPPT*TSSIWV Trigger: GACCCAGATCGAAGAGGTCAACGTGGGTGGCACAGA...CCCTGAAAAGCTGAGGTGACTGGTGGTTTCTGGGGAGCGGGAGACACTTTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS CCA 90 bp | AGCCATTGGCTTCCAGGACCTTCTTCTCTGCGATGGACTTGGTCCTaGAGTAGTGATCCGGGTGTAGGTGAAGAGGCAGGTAAGGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SHWLPGPSSLRWTWS*SSDPGVGEEAGKAE Trigger: CTCTGCCTTACCTGCCTCTTCACCTACACCCGGATCACTACTCCAGGACCAAGTCCATCGCAGAGAAGAAGGTCCTGGAAGCCAATGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 ENSMUST00000174450.2 |
||
| CDS CCA 90 bp | AGGCCAAGCCATTGGCTTCCAGGACCTTCTTCTCTGCGATGGACTTaGTCCTGGAGTAGTGATCCGGGTGTAGGTGAAGAGGCAGGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: RPSHWLPGPSSLRWT*SWSSDPGVGEEAGK Trigger: CTTACCTGCCTCTTCACCTACACCCGGATCACTACTCCAGGACCAAGTCCATCGCAGAGAAGAAGGTCCTGGAAGCCAATGGCTTGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 ENSMUST00000174450.2 |
||
| CDS CCA 90 bp | GTCAGCGAGGCAGCGGATATCTCCGCAGACGAATTTGATTCCCTCTaGAAGGTTCTGGGCTGGTTGGGTGATGTCAAACAGAATCACACG | + |
|
Preference number: 5 (lower is better) Translates to: VSEAADISADEFDSL*KVLGWLGDVKQNHT Trigger: CGTGTGATTCTGTTTGACATCACCCAACCAGCCCAGAACCTTCCAGAGGGAATCAAATTCGTCTGCGGAGATATCCGCTGCCTCGCTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 ENSMUST00000174450.2 |
||
| CDS CCA 90 bp | CAGCGGATATCTCCGCAGACGAATTTGATTCCCTCTGGAAGGTTCTaGGCTGGTTGGGTGATGTCAAACAGAATCACACGGGCTCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QRISPQTNLIPSGRF*AGWVMSNRITRAPF Trigger: GAAAGGAGCCCGTGTGATTCTGTTTGACATCACCCAACCAGCCCAGAACCTTCCAGAGGGAATCAAATTCGTCTGCGGAGATATCCGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 ENSMUST00000174450.2 |
||
| CDS TCA 90 bp | CCATGGGCTTTAAACCACTCTACTACCTCCTGCAGGTCAAATGGCTaGGGCTCGAAGCCTAGCTCTTTCTTGGCTTTCTCTAAGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PWALNHSTTSCRSNG*GSKPSSFLAFSKLK Trigger: CTTCAGCTTAGAGAAAGCCAAGAAAGAGCTAGGCTTCGAGCCTCAGCCATTTGACCTGCAGGAGGTAGTAGAGTGGTTTAAAGCCCATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS-3UTR CAA 90 bp | AATAGGGTGTCTTGTCTATGGATGAACACTCAACACTCAGCACTTGGACCGGATCCCATTTCTGATGACTaGACCTCCAAAGATGACATT | + |
|
Preference number: 5 (lower is better) Translates to: NRVSCLWMNTQHSALGPDPISDD*TSKDDI Trigger: AATGTCATCTTTGGAGGTCAAGTCATCAGAAATGGG...ATCCGGTCCAAGTGCTGAGTGTTGAGTGTTCATCCATAGACAAGACACCCTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS-3UTR CAA 90 bp | TGGATGAACACTCAACACTCAGCACTTGGACCGGATATGAATCTCAGAAGTATACCCATTTCTGATGACTaGACCTCCAAAGATGACATT | + |
|
Preference number: 5 (lower is better) Translates to: WMNTQHSALGPDMNLRSIPISDD*TSKDDI Trigger: AATGTCATCTTTGGAGGTCAAGTCATCAGAAATGGG...TATACTTCTGAGATTCATATCCGGTCCAAGTGCTGAGTGTTGAGTGTTCATCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS-3UTR CAA 90 bp | TTAAGAAGTAATGTGAGGATCCAGGAATGGTACCAGATAATGAGACACATCTTTAAGAACTCAAAGTTATaGACCGGTCTACCATCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LRSNVRIQEWYQIMRHIFKNSKL*TGLPSE Trigger: CTCAGATGGTAGACCGGTCAATAACTTTGAGTTCTT...AAAGATGTGTCTCATTATCTGGTACCATTCCTGGATCCTCACATTACTTCTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS TCA 72 bp | GCCTCTGCTCCCCAGCCCCGTAGATGCCGGCTGGCCTaGTGGCGCAGGTCCGGAGTATACCATCGCCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: ASAPQPRRCRLA*WRRSGVYHRPA Trigger: AGCAGGGCGATGGTATACTCCGGACCTGCGCCATCAGGCCAGCCGGCATCTACGGGGCTGGGGAGCAGAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
||
| CDS GCA 72 bp | GGCCTGATGGCGCAGGTCCGGAGTATACCATCGCCCTaGTTGAAGGCCAAGCCATTGGCTTCCAGGACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GLMAQVRSIPSP*LKAKPLASRTF Trigger: GAAGGTCCTGGAAGCCAATGGCTTGGCCTTCAAGCAGGGCGATGGTATACTCCGGACCTGCGCCATCAGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 ENSMUST00000174450.2 |
||
| CDS TCA 72 bp | GGCAGGCCCGGAGGATGTTCTCTGTGCCACCCACGTTaGCCTCTTCGATCTGGGTCTTGTTCAGTTGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GRPGGCSLCHPR*PLRSGSCSVAP Trigger: GGGAGCAACTGAACAAGACCCAGATCGAAGAGGTCAACGTGGGTGGCACAGAGAACATCCTCCGGGCCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 ENSMUST00000174450.2 |
||
| CDS CAA 90 bp | CTCTGTGCCACCCACGTTGACCTCTTCGATCTGGGTCTTGTTCAGTaGCTCCCTCCCAGACATGCCGTAAGAGGCGACGTGGAACACGCA | + |
|
Preference number: 6 (lower is better) Translates to: LCATHVDLFDLGLVQ*LPPRHAVRGDVEHA Trigger: TGCGTGTTCCACGTCGCCTCTTACGGCATGTCTGGGAGGGAGCAACTGAACAAGACCCAGATCGAAGAGGTCAACGTGGGTGGCACAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 ENSMUST00000174450.2 |
||
| CDS CAA 72 bp | AGGCAGGCCCGGAGGATGTTCTCTGTGCCACCCACGTaGACCTCTTCGATCTGGGTCTTGTTCAGTTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RQARRMFSVPPT*TSSIWVLFSCS Trigger: GGAGCAACTGAACAAGACCCAGATCGAAGAGGTCAACGTGGGTGGCACAGAGAACATCCTCCGGGCCTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 ENSMUST00000174450.2 |
||
| CDS CAA 90 bp | GCCGTCTCCACGTCAGCGAGGCAGCGGATATCTCCGCAGACGAATTaGATTCCCTCTGGAAGGTTCTGGGCTGGTTGGGTGATGTCAAAC | + |
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Preference number: 6 (lower is better) Translates to: AVSTSARQRISPQTN*IPSGRFWAGWVMSN Trigger: GTTTGACATCACCCAACCAGCCCAGAACCTTCCAGAGGGAATCAAATTCGTCTGCGGAGATATCCGCTGCCTCGCTGACGTGGAGACGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 ENSMUST00000174450.2 |
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| CDS CAA 72 bp | GATCAGAATTCCATCCCACAGCATAAACTCCGAGTCTaGACCCGCAGCCCCTCGGCCGTGACCATGGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: DQNSIPQHKLRV*TRSPSAVTMGF Trigger: AAAGCCCATGGTCACGGCCGAGGGGCTGCGGGTCAAGACTCGGAGTTTATGCTGTGGGATGGAATTCTGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| CDS CCA 72 bp | CTTCCAGGACCTTCTTCTCTGCGATGGACTTGGTCCTaGAGTAGTGATCCGGGTGTAGGTGAAGAGGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: LPGPSSLRWTWS*SSDPGVGEEAG Trigger: ACCTGCCTCTTCACCTACACCCGGATCACTACTCCAGGACCAAGTCCATCGCAGAGAAGAAGGTCCTGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 ENSMUST00000174450.2 |
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| CDS CCA 72 bp | CCAAGCCATTGGCTTCCAGGACCTTCTTCTCTGCGATaGACTTGGTCCTGGAGTAGTGATCCGGGTGTAGGT | + |
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Preference number: 6 (lower is better) Translates to: PSHWLPGPSSLR*TWSWSSDPGVG Trigger: ACCTACACCCGGATCACTACTCCAGGACCAAGTCCATCGCAGAGAAGAAGGTCCTGGAAGCCAATGGCTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 ENSMUST00000174450.2 |
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| CDS CCA 72 bp | CATTGGCTTCCAGGACCTTCTTCTCTGCGATGGACTTaGTCCTGGAGTAGTGATCCGGGTGTAGGTGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: HWLPGPSSLRWT*SWSSDPGVGEE Trigger: CTCTTCACCTACACCCGGATCACTACTCCAGGACCAAGTCCATCGCAGAGAAGAAGGTCCTGGAAGCCAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 ENSMUST00000174450.2 |
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| CDS CCA 72 bp | GCAGCGGATATCTCCGCAGACGAATTTGATTCCCTCTaGAAGGTTCTGGGCTGGTTGGGTGATGTCAAACAG | + |
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Preference number: 6 (lower is better) Translates to: AADISADEFDSL*KVLGWLGDVKQ Trigger: CTGTTTGACATCACCCAACCAGCCCAGAACCTTCCAGAGGGAATCAAATTCGTCTGCGGAGATATCCGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 ENSMUST00000174450.2 |
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| CDS CCA 72 bp | TCTCCGCAGACGAATTTGATTCCCTCTGGAAGGTTCTaGGCTGGTTGGGTGATGTCAAACAGAATCACACGG | + |
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Preference number: 6 (lower is better) Translates to: SPQTNLIPSGRF*AGWVMSNRITR Trigger: CCGTGTGATTCTGTTTGACATCACCCAACCAGCCCAGAACCTTCCAGAGGGAATCAAATTCGTCTGCGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 ENSMUST00000174450.2 |
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| CDS TCA 72 bp | TTAAACCACTCTACTACCTCCTGCAGGTCAAATGGCTaGGGCTCGAAGCCTAGCTCTTTCTTGGCTTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: LNHSTTSCRSNG*GSKPSSFLAFS Trigger: AGAGAAAGCCAAGAAAGAGCTAGGCTTCGAGCCTCAGCCATTTGACCTGCAGGAGGTAGTAGAGTGGTTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 |
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| CDS CAA 72 bp | CAGGTAAGGCAGAGACTCGTCCCCATTTCTGATGACTaGACCTCCAAAGATGACATTGAATGTGCTTGTGTA | + |
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Preference number: 6 (lower is better) Translates to: QVRQRLVPISDD*TSKDDIECACV Trigger: TACACAAGCACATTCAATGTCATCTTTGGAGGTCAAGTCATCAGAAATGGGGACGAGTCTCTGCCTTACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037955.14 ENSMUST00000173522.8 ENSMUST00000174450.2 |
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