Pregenerated sensors for SDR16C5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028236Ensembl transcript IDs: ENSMUST00000040925.4
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TGGAAGGACATTCTGATCCACAGCAGAACATACTTGTCTTTGGGTTCTGTCAGACCAGAGAACAAGCACTaGTCCCAGGCGGGCAAACTG | + |
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Preference number: 4 (lower is better) Translates to: WKDILIHSRTYLSLGSVRPENKH*SQAGKL Trigger: CAGTTTGCCCGCCTGGGAGCAGTGCTTGTTCTCTGG...TCTGACAGAACCCAAAGACAAGTATGTTCTGCTGTGGATCAGAATGTCCTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS-3UTR GCA 90 bp | ATCCACAGCAGAACATACTTGTCTTTGGGTTCTGTCAGAAATACCTTTCTTCTTCCCAGGCGGGCAAACTaGAATGCTAAGAGCCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: IHSRTYLSLGSVRNTFLLPRRAN*NAKSLP Trigger: AGGAAGGCTCTTAGCATTGCAGTTTGCCCGCCTGGG...AAGAAGAAAGGTATTTCTGACAGAACCCAAAGACAAGTATGTTCTGCTGTGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS-3UTR TCA 90 bp | TGGAAGGACATTCTGATCCACAGCAGAACATACTTGTCTTTGGGTTCTGTCAGATCCGTGGTTTTGAGATaGCATGAAAAAGTAGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: WKDILIHSRTYLSLGSVRSVVLR*HEKVGP Trigger: AGGCCCTACTTTTTCATGTCATCTCAAAACCACGGA...TCTGACAGAACCCAAAGACAAGTATGTTCTGCTGTGGATCAGAATGTCCTTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS-3UTR TCA 90 bp | ATCCACAGCAGAACATACTTGTCTTTGGGTTCTGTCAGAAATACCTTTCTTCTTTCCCAGCACCTGTTATaGGCACTATCTCACCGGCAA | + |
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Preference number: 4 (lower is better) Translates to: IHSRTYLSLGSVRNTFLLSQHLL*ALSHRQ Trigger: TTGCCGGTGAGATAGTGCTCATAACAGGTGCTGGGA...AAGAAGAAAGGTATTTCTGACAGAACCCAAAGACAAGTATGTTCTGCTGTGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS-3UTR TCA 90 bp | TGGAAGGACATTCTGATCCACAGCAGAACATACTTGTCTTTGGGTTCTGTCAGACAAATGACTTTTCCATaGGGTCATCTGGGCAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: WKDILIHSRTYLSLGSVRQMTFP*GHLGSQ Trigger: TTGACTGCCCAGATGACCTCATGGAAAAGTCATTTG...TCTGACAGAACCCAAAGACAAGTATGTTCTGCTGTGGATCAGAATGTCCTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS-3UTR CCA 90 bp | TGGAAGGACATTCTGATCCACAGCAGAACATACTTGTCTTTGGGTTCTGTCAGACAAACCAAATGGCCGTaGTTGTTAGCAATCATGGCA | + |
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Preference number: 4 (lower is better) Translates to: WKDILIHSRTYLSLGSVRQTKWP*LLAIMA Trigger: TGCCATGATTGCTAACAACCACGGCCATTTGGTTTG...TCTGACAGAACCCAAAGACAAGTATGTTCTGCTGTGGATCAGAATGTCCTTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS-3UTR GCA 90 bp | TGGAAGGACATTCTGATCCACAGCAGAACATACTTGTCTTTGGGTTCTGTCAGAATGAGTCTCATCATTTaGCTCCTTGTTCACATCCCA | + |
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Preference number: 4 (lower is better) Translates to: WKDILIHSRTYLSLGSVRMSLII*LLVHIP Trigger: TGGGATGTGAACAAGGAGGCAAATGATGAGACTCAT...TCTGACAGAACCCAAAGACAAGTATGTTCTGCTGTGGATCAGAATGTCCTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS-3UTR CCA 90 bp | TGGAAGGACATTCTGATCCACAGCAGAACATACTTGTCTTTGGGTTCTGTCAGATTCCATGAGGTCATCTaGGCAGTCAAGGAAATTTCT | + |
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Preference number: 4 (lower is better) Translates to: WKDILIHSRTYLSLGSVRFHEVI*AVKEIS Trigger: AGAAATTTCCTTGACTGCCCAGATGACCTCATGGAA...TCTGACAGAACCCAAAGACAAGTATGTTCTGCTGTGGATCAGAATGTCCTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS-3UTR GCA 90 bp | TGGAAGGACATTCTGATCCACAGCAGAACATACTTGTCTTTGGGTTCTGTCAGAGATAAACATAGATTCTaGAAATCCAAGGGCTGCGAA | + |
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Preference number: 4 (lower is better) Translates to: WKDILIHSRTYLSLGSVRDKHRF*KSKGCE Trigger: TTCGCAGCCCTTGGATTTGCAGAATCTATGTTTATC...TCTGACAGAACCCAAAGACAAGTATGTTCTGCTGTGGATCAGAATGTCCTTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS-3UTR GCA 90 bp | ATCCACAGCAGAACATACTTGTCTTTGGGTTCTGTCAGAAATACCTTTCTTCTTCAGCTGAACTTGAAATaGAAACCAAATGGCCGTGGT | + |
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Preference number: 4 (lower is better) Translates to: IHSRTYLSLGSVRNTFLLQLNLK*KPNGRG Trigger: ACCACGGCCATTTGGTTTGCATTTCAAGTTCAGCTG...AAGAAGAAAGGTATTTCTGACAGAACCCAAAGACAAGTATGTTCTGCTGTGGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS-3UTR TCA 90 bp | ATCCACAGCAGAACATACTTGTCTTTGGGTTCTGTCAGAAATACCTTTCTTCTTGAAATTGACATCAAATaGCTTTTCCATGAGGTCATC | + |
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Preference number: 4 (lower is better) Translates to: IHSRTYLSLGSVRNTFLLEIDIK*LFHEVI Trigger: GATGACCTCATGGAAAAGTCATTTGATGTCAATTTC...AAGAAGAAAGGTATTTCTGACAGAACCCAAAGACAAGTATGTTCTGCTGTGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS GCA 90 bp | TTGTTCACATCCCAGAGAACAAGCACTGCTCCCAGGCGGGCAAACTaGAATGCTAAGAGCCTTCCTAGTCCACTCCCAGCACCTGTTATG | + |
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Preference number: 5 (lower is better) Translates to: LFTSQRTSTAPRRAN*NAKSLPSPLPAPVM Trigger: CATAACAGGTGCTGGGAGTGGACTAGGAAGGCTCTTAGCATTGCAGTTTGCCCGCCTGGGAGCAGTGCTTGTTCTCTGGGATGTGAACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS CCA 90 bp | ACACTTCTTCCCTCCGGCTGCAGTCACAGGTGTAGGCATGTACTCTaGCAGCTCCTGCTTCCCGAGCTAACTGATGAGTCTCATCATTTG | + |
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Preference number: 5 (lower is better) Translates to: TLLPSGCSHRCRHVL*QLLLPELTDESHHL Trigger: CAAATGATGAGACTCATCAGTTAGCTCGGGAAGCAGGAGCTGCCAGAGTACATGCCTACACCTGTGACTGCAGCCGGAGGGAAGAAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS-3UTR CAA 90 bp | TGGAAGGACATTCTGATCCACAGCAGAACATACTTGTCTTTGGGTTCTGTCAGAACCAAATGGCCGTGGTaGTTAGCAATCATGGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: WKDILIHSRTYLSLGSVRTKWPW*LAIMAG Trigger: GCCTGCCATGATTGCTAACAACCACGGCCATTTGGT...TCTGACAGAACCCAAAGACAAGTATGTTCTGCTGTGGATCAGAATGTCCTTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS-3UTR CAA 90 bp | TGGAAGGACATTCTGATCCACAGCAGAACATACTTGTCTTTGGGTTCTGTCAGAGATGAGTCTCATCATTaGCCTCCTTGTTCACATCCC | + |
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Preference number: 5 (lower is better) Translates to: WKDILIHSRTYLSLGSVRDESHH*PPCSHP Trigger: GGGATGTGAACAAGGAGGCAAATGATGAGACTCATC...TCTGACAGAACCCAAAGACAAGTATGTTCTGCTGTGGATCAGAATGTCCTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS-3UTR CAA 90 bp | TGGAAGGACATTCTGATCCACAGCAGAACATACTTGTCTTTGGGTTCTGTCAGACGTTTTGATCCCCCATaGTTTCTTGGCAAGTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: WKDILIHSRTYLSLGSVRRFDPP*FLGKCF Trigger: GAAACACTTGCCAAGAAACAATGGGGGATCAAAACG...TCTGACAGAACCCAAAGACAAGTATGTTCTGCTGTGGATCAGAATGTCCTTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS CCA 90 bp | ACTCCAATTAATCCAGCTGAACTTGAAATGCAAACCAAATGGCCGTaGTTGTTAGCAATCATGGCAGGCAGGAAGGCTTTATACATCCAT | + |
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Preference number: 5 (lower is better) Translates to: TPINPAELEMQTKWP*LLAIMAGRKALYIH Trigger: ATGGATGTATAAAGCCTTCCTGCCTGCCATGATTGCTAACAACCACGGCCATTTGGTTTGCATTTCAAGTTCAGCTGGATTAATTGGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS CCA 90 bp | CCATTTACTCCAATTAATCCAGCTGAACTTGAAATGCAAACCAAATaGCCGTGGTTGTTAGCAATCATGGCAGGCAGGAAGGCTTTATAC | + |
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Preference number: 5 (lower is better) Translates to: PFTPINPAELEMQTK*PWLLAIMAGRKALY Trigger: GTATAAAGCCTTCCTGCCTGCCATGATTGCTAACAACCACGGCCATTTGGTTTGCATTTCAAGTTCAGCTGGATTAATTGGAGTAAATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS-3UTR CAA 90 bp | TGGAAGGACATTCTGATCCACAGCAGAACATACTTGTCTTTGGGTTCTGTCAGATTAAGTTTTCTTCTTTaGGCCAGTGAAGCCCTCTGT | + |
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Preference number: 5 (lower is better) Translates to: WKDILIHSRTYLSLGSVRLSFLL*ASEALC Trigger: ACAGAGGGCTTCACTGGCCAAAAGAAGAAAACTTAA...TCTGACAGAACCCAAAGACAAGTATGTTCTGCTGTGGATCAGAATGTCCTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS-3UTR CAA 90 bp | ATCCACAGCAGAACATACTTGTCTTTGGGTTCTGTCAGAAATACCTTTCTTCTTTCATCATTTGCCTCCTaGTTCACATCCCAGAGAACA | + |
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Preference number: 5 (lower is better) Translates to: IHSRTYLSLGSVRNTFLLSSFAS*FTSQRT Trigger: TGTTCTCTGGGATGTGAACAAGGAGGCAAATGATGA...AAGAAGAAAGGTATTTCTGACAGAACCCAAAGACAAGTATGTTCTGCTGTGGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS-3UTR CAA 90 bp | ATCCACAGCAGAACATACTTGTCTTTGGGTTCTGTCAGAAATACCTTTCTTCTTATCCCCCATTGTTTCTaGGCAAGTGTTTCGATAAAC | + |
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Preference number: 5 (lower is better) Translates to: IHSRTYLSLGSVRNTFLLIPHCF*ASVSIN Trigger: GTTTATCGAAACACTTGCCAAGAAACAATGGGGGAT...AAGAAGAAAGGTATTTCTGACAGAACCCAAAGACAAGTATGTTCTGCTGTGGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS CCA 72 bp | CCCTCCGGCTGCAGTCACAGGTGTAGGCATGTACTCTaGCAGCTCCTGCTTCCCGAGCTAACTGATGAGTCT | + |
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Preference number: 6 (lower is better) Translates to: PSGCSHRCRHVL*QLLLPELTDES Trigger: AGACTCATCAGTTAGCTCGGGAAGCAGGAGCTGCCAGAGTACATGCCTACACCTGTGACTGCAGCCGGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS GCA 72 bp | TCCCAGAGAACAAGCACTGCTCCCAGGCGGGCAAACTaGAATGCTAAGAGCCTTCCTAGTCCACTCCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: SQRTSTAPRRAN*NAKSLPSPLPA Trigger: TGCTGGGAGTGGACTAGGAAGGCTCTTAGCATTGCAGTTTGCCCGCCTGGGAGCAGTGCTTGTTCTCTGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS CAA 90 bp | CTCTGGCAGCTCCTGCTTCCCGAGCTAACTGATGAGTCTCATCATTaGCCTCCTTGTTCACATCCCAGAGAACAAGCACTGCTCCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: LWQLLLPELTDESHH*PPCSHPREQALLPG Trigger: GCCTGGGAGCAGTGCTTGTTCTCTGGGATGTGAACAAGGAGGCAAATGATGAGACTCATCAGTTAGCTCGGGAAGCAGGAGCTGCCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS TCA 72 bp | CTAAGAGCCTTCCTAGTCCACTCCCAGCACCTGTTATaGGCACTATCTCACCGGCAACGTTCTTCCGTGGTT | + |
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Preference number: 6 (lower is better) Translates to: LRAFLVHSQHLL*ALSHRQRSSVV Trigger: AACCACGGAAGAACGTTGCCGGTGAGATAGTGCTCATAACAGGTGCTGGGAGTGGACTAGGAAGGCTCTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS CCA 72 bp | ATGAGGATAGAGACATCACCAACTTCTTTCTTAACCTaGTCAGCCACTCTGTACACTTCTTCCCTCCGGCTG | + |
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Preference number: 6 (lower is better) Translates to: MRIETSPTSFLT*SATLYTSSLRL Trigger: CAGCCGGAGGGAAGAAGTGTACAGAGTGGCTGACCAGGTTAAGAAAGAAGTTGGTGATGTCTCTATCCTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS CAA 72 bp | CCAGCTGAACTTGAAATGCAAACCAAATGGCCGTGGTaGTTAGCAATCATGGCAGGCAGGAAGGCTTTATAC | + |
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Preference number: 6 (lower is better) Translates to: PAELEMQTKWPW*LAIMAGRKALY Trigger: GTATAAAGCCTTCCTGCCTGCCATGATTGCTAACAACCACGGCCATTTGGTTTGCATTTCAAGTTCAGCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS CCA 72 bp | AATCCAGCTGAACTTGAAATGCAAACCAAATGGCCGTaGTTGTTAGCAATCATGGCAGGCAGGAAGGCTTTA | + |
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Preference number: 6 (lower is better) Translates to: NPAELEMQTKWP*LLAIMAGRKAL Trigger: TAAAGCCTTCCTGCCTGCCATGATTGCTAACAACCACGGCCATTTGGTTTGCATTTCAAGTTCAGCTGGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS CCA 72 bp | CCAATTAATCCAGCTGAACTTGAAATGCAAACCAAATaGCCGTGGTTGTTAGCAATCATGGCAGGCAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: PINPAELEMQTK*PWLLAIMAGRK Trigger: CTTCCTGCCTGCCATGATTGCTAACAACCACGGCCATTTGGTTTGCATTTCAAGTTCAGCTGGATTAATTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS CAA 90 bp | TCTGGGCAGTCAAGGAAATTTCTGCCTGTTACAATGCCGGCATTGTaGATGAGGATAGAGACATCACCAACTTCTTTCTTAACCTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: SGQSRKFLPVTMPAL*MRIETSPTSFLTWS Trigger: TGACCAGGTTAAGAAAGAAGTTGGTGATGTCTCTATCCTCATCAACAATGCCGGCATTGTAACAGGCAGAAATTTCCTTGACTGCCCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS CAA 90 bp | TCATCTGGGCAGTCAAGGAAATTTCTGCCTGTTACAATGCCGGCATaGTTGATGAGGATAGAGACATCACCAACTTCTTTCTTAACCTGG | + |
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Preference number: 6 (lower is better) Translates to: SSGQSRKFLPVTMPA*LMRIETSPTSFLTW Trigger: CCAGGTTAAGAAAGAAGTTGGTGATGTCTCTATCCTCATCAACAATGCCGGCATTGTAACAGGCAGAAATTTCCTTGACTGCCCAGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS CAA 72 bp | CAGTCAAGGAAATTTCTGCCTGTTACAATGCCGGCATaGTTGATGAGGATAGAGACATCACCAACTTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: QSRKFLPVTMPA*LMRIETSPTSF Trigger: GAAAGAAGTTGGTGATGTCTCTATCCTCATCAACAATGCCGGCATTGTAACAGGCAGAAATTTCCTTGACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS CAA 90 bp | CCAATTAATCCAGCTGAACTTGAAATGCAAACCAAATGGCCGTGGTaGTTAGCAATCATGGCAGGCAGGAAGGCTTTATACATCCATAAA | + |
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Preference number: 6 (lower is better) Translates to: PINPAELEMQTKWPW*LAIMAGRKALYIHK Trigger: TTTATGGATGTATAAAGCCTTCCTGCCTGCCATGATTGCTAACAACCACGGCCATTTGGTTTGCATTTCAAGTTCAGCTGGATTAATTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS CAA 90 bp | ATAAAGAATGGGCACACAATTGTCGTTTTGATCCCCCATTGTTTCTaGGCAAGTGTTTCGATAAACATAGATTCTGCAAATCCAAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: IKNGHTIVVLIPHCF*ASVSINIDSANPRA Trigger: AGCCCTTGGATTTGCAGAATCTATGTTTATCGAAACACTTGCCAAGAAACAATGGGGGATCAAAACGACAATTGTGTGCCCATTCTTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS CAA 72 bp | TCAAGGAAATTTCTGCCTGTTACAATGCCGGCATTGTaGATGAGGATAGAGACATCACCAACTTCTTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: SRKFLPVTMPAL*MRIETSPTSFL Trigger: TAAGAAAGAAGTTGGTGATGTCTCTATCCTCATCAACAATGCCGGCATTGTAACAGGCAGAAATTTCCTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS CAA 72 bp | GGGCACACAATTGTCGTTTTGATCCCCCATTGTTTCTaGGCAAGTGTTTCGATAAACATAGATTCTGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: GHTIVVLIPHCF*ASVSINIDSAN Trigger: ATTTGCAGAATCTATGTTTATCGAAACACTTGCCAAGAAACAATGGGGGATCAAAACGACAATTGTGTGCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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| CDS CAA 72 bp | CCAGTTTTTATAAAGAATGGGCACACAATTGTCGTTTaGATCCCCCATTGTTTCTTGGCAAGTGTTTCGATA | + |
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Preference number: 6 (lower is better) Translates to: PVFIKNGHTIVV*IPHCFLASVSI Trigger: TATCGAAACACTTGCCAAGAAACAATGGGGGATCAAAACGACAATTGTGTGCCCATTCTTTATAAAAACTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040925.4 |
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