Pregenerated sensors for SDHB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009863Ensembl transcript IDs: ENSMUST00000010007.9
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | GGAGACTCCAGCTGTTTGACACCAGAGTTGACAGGCACACTCAGCACGGACTGGGCAGATACTGTTGCTTaGCCTCCTGGGACTCATCCT | + |
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Preference number: 4 (lower is better) Translates to: GDSSCLTPELTGTLSTDWADTVA*PPGTHP Trigger: AGGATGAGTCCCAGGAGGGCAAGCAACAGTATCTGC...CCAGTCCGTGCTGAGTGTGCCTGTCAACTCTGGTGTCAAACAGCTGGAGTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS-3UTR CCA 90 bp | GGAGACTCCAGCTGTTTGACACCAGAGTTGACAGGCACACTCAGCACGGACTGGTCTCCCGGTCCTCGATaGACTGCAGATACTGTTGCT | + |
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Preference number: 4 (lower is better) Translates to: GDSSCLTPELTGTLSTDWSPGPR*TADTVA Trigger: AGCAACAGTATCTGCAGTCCATCGAGGACCGGGAGA...CCAGTCCGTGCTGAGTGTGCCTGTCAACTCTGGTGTCAAACAGCTGGAGTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS-3UTR TCA 90 bp | CTGTACTTAGGGAGACTCCAGCTGTTTGACACCAGAGTTGACAGGCACACTCAGCCAGGCGTTCCTCTGTaGAGTCGTCTCTGGAGTCGA | + |
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Preference number: 4 (lower is better) Translates to: LYLGRLQLFDTRVDRHTQPGVPL*SRLWSR Trigger: TCGACTCCAGAGACGACTTCACAGAGGAACGCCTGG...CTGAGTGTGCCTGTCAACTCTGGTGTCAAACAGCTGGAGTCTCCCTAAGTACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS-3UTR GCA 90 bp | CTGTACTTAGGGAGACTCCAGCTGTTTGACACCAGAGTTGACAGGCACACTCAGGGCCTGCATGAGAACTaGAGGCCCCAGGTACTTGTC | + |
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Preference number: 4 (lower is better) Translates to: LYLGRLQLFDTRVDRHTQGLHEN*RPQVLV Trigger: GACAAGTACCTGGGGCCTGCAGTTCTCATGCAGGCC...CTGAGTGTGCCTGTCAACTCTGGTGTCAAACAGCTGGAGTCTCCCTAAGTACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS-3UTR GCA 90 bp | CTGTACTTAGGGAGACTCCAGCTGTTTGACACCAGAGTTGACAGGCACACTCAGCGCAAGAGCCACAGATaGCTTCTCTACAAGATCTTC | + |
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Preference number: 4 (lower is better) Translates to: LYLGRLQLFDTRVDRHTQRKSHR*LLYKIF Trigger: GAAGATCTTGTAGAGAAGGCATCTGTGGCTCTTGCG...CTGAGTGTGCCTGTCAACTCTGGTGTCAAACAGCTGGAGTCTCCCTAAGTACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS-3UTR GCA 90 bp | TGTTTATTACATATGCTGTACTTAGGGAGACTCCAGCTGTTTGACACCAGAGTTTGGGGCAGCTGGTGCTaGAGCAGGCACACAGGATGC | + |
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Preference number: 4 (lower is better) Translates to: CLLHMLYLGRLQLFDTRVWGSWC*SRHTGC Trigger: GCATCCTGTGTGCCTGCTGCAGCACCAGCTGCCCCA...AACTCTGGTGTCAAACAGCTGGAGTCTCCCTAAGTACAGCATATGTAATAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS-3UTR GCA 90 bp | TTACATATGCTGTACTTAGGGAGACTCCAGCTGTTTGACACCAGAGTTGACAGGTTTGATTCTGGGAGCTaGAGCAGCAGCTGTCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: LHMLYLGRLQLFDTRVDRFDSGS*SSSCLC Trigger: GCACAGACAGCTGCTGCTGCAGCTCCCAGAATCAAA...CCTGTCAACTCTGGTGTCAAACAGCTGGAGTCTCCCTAAGTACAGCATATGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS-3UTR GCA 90 bp | TTACATATGCTGTACTTAGGGAGACTCCAGCTGTTTGACACCAGAGTTGACAGGGACTGCAGATACTGTTaGTTGCCCTCCTGGGACTCA | + |
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Preference number: 4 (lower is better) Translates to: LHMLYLGRLQLFDTRVDRDCRYC*LPSWDS Trigger: TGAGTCCCAGGAGGGCAAGCAACAGTATCTGCAGTC...CCTGTCAACTCTGGTGTCAAACAGCTGGAGTCTCCCTAAGTACAGCATATGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS-3UTR GCA 90 bp | TGTTTATTACATATGCTGTACTTAGGGAGACTCCAGCTGTTTGACACCAGAGTTACAGAGAAGGGGTCCTaGAGCTTGGCCAGGCGTTCC | + |
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Preference number: 4 (lower is better) Translates to: CLLHMLYLGRLQLFDTRVTEKGS*SLARRS Trigger: GGAACGCCTGGCCAAGCTGCAGGACCCCTTCTCTGT...AACTCTGGTGTCAAACAGCTGGAGTCTCCCTAAGTACAGCATATGTAATAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS-3UTR TCA 90 bp | TTACATATGCTGTACTTAGGGAGACTCCAGCTGTTTGACACCAGAGTTGACAGGCAGGGACTAGATCCTTaGTCACATACATATGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: LHMLYLGRLQLFDTRVDRQGLDP*SHTYVE Trigger: TTCCACATATGTATGTGATCAAGGATCTAGTCCCTG...CCTGTCAACTCTGGTGTCAAACAGCTGGAGTCTCCCTAAGTACAGCATATGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS-3UTR TCA 90 bp | TTATTACATATGCTGTACTTAGGGAGACTCCAGCTGTTTGACACCAGAGTTGACTCGCCATCATCTTCTTaGTTTCCGCAATCGCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: LLHMLYLGRLQLFDTRVDSPSSS*FPQSLS Trigger: GGAAAGCGATTGCGGAAATCAAGAAGATGATGGCGA...GTCAACTCTGGTGTCAAACAGCTGGAGTCTCCCTAAGTACAGCATATGTAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS-3UTR CCA 90 bp | TTATTACATATGCTGTACTTAGGGAGACTCCAGCTGTTTGACACCAGAGTTGACTCAGATAAGGCTCAATaGATTTGTATTGTGCGTAGA | + |
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Preference number: 4 (lower is better) Translates to: LLHMLYLGRLQLFDTRVDSDKAQ*ICIVRR Trigger: TCTACGCACAATACAAATCCATTGAGCCTTATCTGA...GTCAACTCTGGTGTCAAACAGCTGGAGTCTCCCTAAGTACAGCATATGTAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS GCA 90 bp | CAGCTGTCTGTGCCCCTCGACAGGCCTGAAACTGCAGGCCGACTCTaGCGAGAACGGCAGCCGGGAAGCCGCGCTTCAAGGAGACCCCGA | + |
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Preference number: 5 (lower is better) Translates to: QLSVPLDRPETAGRL*RERQPGSRASRRPR Trigger: TCGGGGTCTCCTTGAAGCGCGGCTTCCCGGCTGCCGTTCTCGGCAGAGTCGGCCTGCAGTTTCAGGCCTGTCGAGGGGCACAGACAGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS CCA 90 bp | ACAGGATGCACTCGTACAGCCCGTCCAGCTTCTCCCGGTCCTCGATaGACTGCAGATACTGTTGCTTGCCCTCCTGGGACTCATCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: TGCTRTARPASPGPR*TADTVACPPGTHPS Trigger: AGAAGGATGAGTCCCAGGAGGGCAAGCAACAGTATCTGCAGTCCATCGAGGACCGGGAGAAGCTGGACGGGCTGTACGAGTGCATCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS-3UTR CAA 90 bp | GGGAGACTCCAGCTGTTTGACACCAGAGTTGACAGGCACACTCAGCACGGACTGGGACTGCAGATACTGTaGCTTGCCCTCCTGGGACTC | + |
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Preference number: 5 (lower is better) Translates to: GRLQLFDTRVDRHTQHGLGLQIL*LALLGL Trigger: GAGTCCCAGGAGGGCAAGCAACAGTATCTGCAGTCC...CAGTCCGTGCTGAGTGTGCCTGTCAACTCTGGTGTCAAACAGCTGGAGTCTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS GCA 90 bp | ATGCACTCGTACAGCCCGTCCAGCTTCTCCCGGTCCTCGATGGACTaGAGATACTGTTGCTTGCCCTCCTGGGACTCATCCTTCTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: MHSYSPSSFSRSSMD*RYCCLPSWDSSFFF Trigger: GAAGAAGAAGGATGAGTCCCAGGAGGGCAAGCAACAGTATCTGCAGTCCATCGAGGACCGGGAGAAGCTGGACGGGCTGTACGAGTGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS-3UTR CAA 90 bp | TACTTAGGGAGACTCCAGCTGTTTGACACCAGAGTTGACAGGCACACTCAGCACCCCGGATTCAGACCCTaGGGGCAGGTCTGTGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: YLGRLQLFDTRVDRHTQHPGFRP*GQVCVQ Trigger: CTGCACACAGACCTGCCCCAAGGGTCTGAATCCGGG...GTGCTGAGTGTGCCTGTCAACTCTGGTGTCAAACAGCTGGAGTCTCCCTAAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS TCA 90 bp | GGTCCGTGTCGATCCTGCGTGTGCACGCCAGAGTATTGCCTCCGTTaGTGTTCATGGCGCAAGAGCCACAGATGCCTTCTCTACAAGATC | + |
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Preference number: 5 (lower is better) Translates to: GPCRSCVCTPEYCLR*CSWRKSHRCLLYKI Trigger: GATCTTGTAGAGAAGGCATCTGTGGCTCTTGCGCCATGAACATCAACGGAGGCAATACTCTGGCGTGCACACGCAGGATCGACACGGACC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS GCA 90 bp | CGTCCAGCTTCTCCCGGTCCTCGATGGACTGCAGATACTGTTGCTTaGCCTCCTGGGACTCATCCTTCTTCTTCAGATAAGGCTCAATGG | + |
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Preference number: 5 (lower is better) Translates to: RPASPGPRWTADTVA*PPGTHPSSSDKAQW Trigger: CCATTGAGCCTTATCTGAAGAAGAAGGATGAGTCCCAGGAGGGCAAGCAACAGTATCTGCAGTCCATCGAGGACCGGGAGAAGCTGGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS-3UTR CAA 90 bp | GGAGACTCCAGCTGTTTGACACCAGAGTTGACAGGCACACTCAGCACGGACTGGCTCAATGGATTTGTATaGTGCGTAGAAGTTACTCAA | + |
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Preference number: 5 (lower is better) Translates to: GDSSCLTPELTGTLSTDWLNGFV*CVEVTQ Trigger: TTGAGTAACTTCTACGCACAATACAAATCCATTGAG...CCAGTCCGTGCTGAGTGTGCCTGTCAACTCTGGTGTCAAACAGCTGGAGTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS-3UTR CAA 90 bp | TTATTACATATGCTGTACTTAGGGAGACTCCAGCTGTTTGACACCAGAGTTGACGTGCACGCCAGAGTATaGCCTCCGTTGATGTTCATG | + |
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Preference number: 5 (lower is better) Translates to: LLHMLYLGRLQLFDTRVDVHARV*PPLMFM Trigger: CATGAACATCAACGGAGGCAATACTCTGGCGTGCAC...GTCAACTCTGGTGTCAAACAGCTGGAGTCTCCCTAAGTACAGCATATGTAATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS-3UTR CAA 90 bp | AAATGTTTATTACATATGCTGTACTTAGGGAGACTCCAGCTGTTTGACACCAGATGCAGATACTGTTGCTaGCCCTCCTGGGACTCATCC | + |
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Preference number: 5 (lower is better) Translates to: KCLLHMLYLGRLQLFDTRCRYCC*PSWDSS Trigger: GGATGAGTCCCAGGAGGGCAAGCAACAGTATCTGCA...TCTGGTGTCAAACAGCTGGAGTCTCCCTAAGTACAGCATATGTAATAAACATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS-3UTR CAA 90 bp | TTATTACATATGCTGTACTTAGGGAGACTCCAGCTGTTTGACACCAGAGTTGACACTTCATTCTTGATCTaGATTAAAGCATCCAACACC | + |
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Preference number: 5 (lower is better) Translates to: LLHMLYLGRLQLFDTRVDTSFLI*IKASNT Trigger: GGTGTTGGATGCTTTAATCAAGATCAAGAATGAAGT...GTCAACTCTGGTGTCAAACAGCTGGAGTCTCCCTAAGTACAGCATATGTAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS TCA 90 bp | ATTTGTATTGTGCGTAGAAGTTACTCAAATCAGGGACTAGATCCTTaGTCACATACATATGTGGAAGAGGGTAGATTTTGGAGACTTTGC | + |
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Preference number: 5 (lower is better) Translates to: ICIVRRSYSNQGLDP*SHTYVEEGRFWRLC Trigger: GCAAAGTCTCCAAAATCTACCCTCTTCCACATATGTATGTGATCAAGGATCTAGTCCCTGATTTGAGTAACTTCTACGCACAATACAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS TCA 72 bp | GCTGCAGCAGCAGCTGTCTGTGCCCCTCGACAGGCCTaGAACTGCAGGCCGACTCTGCCGAGAACGGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: AAAAAVCAPRQA*NCRPTLPRTAA Trigger: GGCTGCCGTTCTCGGCAGAGTCGGCCTGCAGTTTCAGGCCTGTCGAGGGGCACAGACAGCTGCTGCTGCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS CCA 72 bp | ACTCGTACAGCCCGTCCAGCTTCTCCCGGTCCTCGATaGACTGCAGATACTGTTGCTTGCCCTCCTGGGACT | + |
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Preference number: 6 (lower is better) Translates to: TRTARPASPGPR*TADTVACPPGT Trigger: AGTCCCAGGAGGGCAAGCAACAGTATCTGCAGTCCATCGAGGACCGGGAGAAGCTGGACGGGCTGTACGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS CAA 72 bp | AGGTCCGTGTCGATCCTGCGTGTGCACGCCAGAGTATaGCCTCCGTTGATGTTCATGGCGCAAGAGCCACAG | + |
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Preference number: 6 (lower is better) Translates to: RSVSILRVHARV*PPLMFMAQEPQ Trigger: CTGTGGCTCTTGCGCCATGAACATCAACGGAGGCAATACTCTGGCGTGCACACGCAGGATCGACACGGACCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS TCA 72 bp | CGATCCTGCGTGTGCACGCCAGAGTATTGCCTCCGTTaGTGTTCATGGCGCAAGAGCCACAGATGCCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: RSCVCTPEYCLR*CSWRKSHRCLL Trigger: GAGAAGGCATCTGTGGCTCTTGCGCCATGAACATCAACGGAGGCAATACTCTGGCGTGCACACGCAGGATCG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS CAA 90 bp | ACTTTGCTGAGGTCCGTGTCGATCCTGCGTGTGCACGCCAGAGTATaGCCTCCGTTGATGTTCATGGCGCAAGAGCCACAGATGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: TLLRSVSILRVHARV*PPLMFMAQEPQMPS Trigger: AGAAGGCATCTGTGGCTCTTGCGCCATGAACATCAACGGAGGCAATACTCTGGCGTGCACACGCAGGATCGACACGGACCTCAGCAAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS CAA 72 bp | TCGATCCTGCGTGTGCACGCCAGAGTATTGCCTCCGTaGATGTTCATGGCGCAAGAGCCACAGATGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SILRVHARVLPP*MFMAQEPQMPS Trigger: AGAAGGCATCTGTGGCTCTTGCGCCATGAACATCAACGGAGGCAATACTCTGGCGTGCACACGCAGGATCGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS CAA 72 bp | CAGCTTCTCCCGGTCCTCGATGGACTGCAGATACTGTaGCTTGCCCTCCTGGGACTCATCCTTCTTCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: QLLPVLDGLQIL*LALLGLILLLQ Trigger: CTGAAGAAGAAGGATGAGTCCCAGGAGGGCAAGCAACAGTATCTGCAGTCCATCGAGGACCGGGAGAAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS CAA 90 bp | AGGTCCGTGTCGATCCTGCGTGTGCACGCCAGAGTATTGCCTCCGTaGATGTTCATGGCGCAAGAGCCACAGATGCCTTCTCTACAAGAT | + |
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Preference number: 6 (lower is better) Translates to: RSVSILRVHARVLPP*MFMAQEPQMPSLQD Trigger: ATCTTGTAGAGAAGGCATCTGTGGCTCTTGCGCCATGAACATCAACGGAGGCAATACTCTGGCGTGCACACGCAGGATCGACACGGACCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS GCA 72 bp | AGCTTCTCCCGGTCCTCGATGGACTGCAGATACTGTTaGTTGCCCTCCTGGGACTCATCCTTCTTCTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: SFSRSSMDCRYC*LPSWDSSFFFR Trigger: TCTGAAGAAGAAGGATGAGTCCCAGGAGGGCAAGCAACAGTATCTGCAGTCCATCGAGGACCGGGAGAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS TCA 72 bp | ACATATGTGGAAGAGGGTAGATTTTGGAGACTTTGCTaGGGTCCGTGTCGATCCTGCGTGTGCACGCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: TYVEEGRFWRLC*GPCRSCVCTPE Trigger: CTCTGGCGTGCACACGCAGGATCGACACGGACCTCAGCAAAGTCTCCAAAATCTACCCTCTTCCACATATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS GCA 72 bp | TCTCCCGGTCCTCGATGGACTGCAGATACTGTTGCTTaGCCTCCTGGGACTCATCCTTCTTCTTCAGATAAG | + |
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Preference number: 6 (lower is better) Translates to: SPGPRWTADTVA*PPGTHPSSSDK Trigger: CTTATCTGAAGAAGAAGGATGAGTCCCAGGAGGGCAAGCAACAGTATCTGCAGTCCATCGAGGACCGGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS GCA 72 bp | ATAGGTCCGCACTTATTCAGATCCACCTCGTACGTCTaGATTCGAGGTTTATCTCCAGTCTTGTCTGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: IGPHLFRSTSYV*IRGLSPVLSGS Trigger: GGACCCAGACAAGACTGGAGATAAACCTCGAATGCAGACGTACGAGGTGGATCTGAATAAGTGCGGACCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS TCA 72 bp | GTGCGTAGAAGTTACTCAAATCAGGGACTAGATCCTTaGTCACATACATATGTGGAAGAGGGTAGATTTTGG | + |
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Preference number: 6 (lower is better) Translates to: VRRSYSNQGLDP*SHTYVEEGRFW Trigger: CCAAAATCTACCCTCTTCCACATATGTATGTGATCAAGGATCTAGTCCCTGATTTGAGTAACTTCTACGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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| CDS CAA 90 bp | CAAGATCTTCGGAAGGTTAAAGTAGAATCCACTTCATTCTTGATCTaGATTAAAGCATCCAACACCATAGGTCCGCACTTATTCAGATCC | + |
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Preference number: 6 (lower is better) Translates to: QDLRKVKVESTSFLI*IKASNTIGPHLFRS Trigger: GGATCTGAATAAGTGCGGACCTATGGTGTTGGATGCTTTAATCAAGATCAAGAATGAAGTGGATTCTACTTTAACCTTCCGAAGATCTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010007.9 |
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