Pregenerated sensors for SDHAF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024668Ensembl transcript IDs: ENSMUST00000025570.8, ENSMUST00000235222.2, ENSMUST00000235243.2, ENSMUST00000235853.2, ENSMUST00000236455.2, ENSMUST00000237827.2
Found 190 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGCCTGCTTTCTCTAGCCAACACTCACATACCGGCCAGAGTGACTaGCTCTTTGCAGCTGAGGGCAGAGCTCCTGCAGAAAGGATGCCT | + |
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Preference number: 1 (lower is better) Translates to: WPAFSSQHSHTGQSD*LFAAEGRAPAERMP Trigger: AGGCATCCTTTCTGCAGGAGCTCTGCCCTCAGCTGCAAAGAGGCAGTCACTCTGGCCGGTATGTGAGTGTTGGCTAGAGAAAGCAGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025570.8 ENSMUST00000235853.2 |
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| 3UTR CCA 90 bp | CAGAGCTACAGTGGGGCCTGGGGGATTCTGGGTGGATCCTCACTTTaGGAAGTAGCTAGTGGCCTCCTACCTACCACAGAGCAATACAGA | + |
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Preference number: 1 (lower is better) Translates to: QSYSGAWGILGGSSL*EVASGLLPTTEQYR Trigger: TCTGTATTGCTCTGTGGTAGGTAGGAGGCCACTAGCTACTTCCCAAAGTGAGGATCCACCCAGAATCCCCCAGGCCCCACTGTAGCTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025570.8 |
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| 3UTR GCA 90 bp | GCTTGGACTCATAACCACCATGCTACACTGTACACCATGCTACCCTaGATCTTCTTACCAGAGCTACAGTGGGGCCTGGGGGATTCTGGG | + |
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Preference number: 1 (lower is better) Translates to: AWTHNHHATLYTMLP*IFLPELQWGLGDSG Trigger: CCCAGAATCCCCCAGGCCCCACTGTAGCTCTGGTAAGAAGATGCAGGGTAGCATGGTGTACAGTGTAGCATGGTGGTTATGAGTCCAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025570.8 |
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| 3UTR GCA 90 bp | GAGCAAAGGCTTGGACTCATAACCACCATGCTACACTGTACACCATaGTACCCTGCATCTTCTTACCAGAGCTACAGTGGGGCCTGGGGG | + |
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Preference number: 1 (lower is better) Translates to: EQRLGLITTMLHCTP*YPASSYQSYSGAWG Trigger: CCCCCAGGCCCCACTGTAGCTCTGGTAAGAAGATGCAGGGTAGCATGGTGTACAGTGTAGCATGGTGGTTATGAGTCCAAGCCTTTGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025570.8 |
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| 3UTR TCA 90 bp | GAATCAGGTCCTCTAGAAGAACAGCCAGCCAGTGCTCTTAACCGCTaGGCCATCTCTCCAGCCCCAAATCCTGGCTTTTTGATCATGGAT | + |
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Preference number: 1 (lower is better) Translates to: ESGPLEEQPASALNR*AISPAPNPGFLIMD Trigger: ATCCATGATCAAAAAGCCAGGATTTGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGGCTGGCTGTTCTTCTAGAGGACCTGATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025570.8 ENSMUST00000235853.2 |
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| 3UTR GCA 90 bp | TACTCCCTGAGTCTTACAGATGGCTCAGCGGTTAAGAGCACCAACTaGTCTTCCCAAGGTCCTGAGTTCAATTCCCAGCAACCACATGGT | + |
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Preference number: 1 (lower is better) Translates to: YSLSLTDGSAVKSTN*SSQGPEFNSQQPHG Trigger: ACCATGTGGTTGCTGGGAATTGAACTCAGGACCTTGGGAAGAGCAGTTGGTGCTCTTAACCGCTGAGCCATCTGTAAGACTCAGGGAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
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| 3UTR CCA 90 bp | CCAGCATCCCCCTCTTTCTGCTCTCATAGAGTAAGCGGGCTCTTTTaGTTTCTATGGATTCATCAGTTCTCTCCTGCCACGGAGGCAAAG | + |
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Preference number: 1 (lower is better) Translates to: PASPSFCSHRVSGLF*FLWIHQFSPATEAK Trigger: CTTTGCCTCCGTGGCAGGAGAGAACTGATGAATCCATAGAAACCAAAAGAGCCCGCTTACTCTATGAGAGCAGAAAGAGGGGGATGCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235853.2 |
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| 3UTR TCA 90 bp | CTGAATTCCCAACATTCTGTTATCCCAGCCCTGAGGAGGCTGGGATaGAAGGATCATGAGTTCAAAACCAGCCTGACCCGAACAGTGAAC | + |
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Preference number: 1 (lower is better) Translates to: LNSQHSVIPALRRLG*KDHEFKTSLTRTVN Trigger: GTTCACTGTTCGGGTCAGGCTGGTTTTGAACTCATGATCCTTTCATCCCAGCCTCCTCAGGGCTGGGATAACAGAATGTTGGGAATTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
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| 3UTR CCA 90 bp | CACGCTGGAAGGGAGCAGTTTTATCTTAACAAAGCCCAGGGTCACTaGATAGACGATAGGGTCAGCTCTTCCTTCAGCAGCAGTGTCTTT | + |
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Preference number: 1 (lower is better) Translates to: HAGREQFYLNKAQGH*IDDRVSSSFSSSVF Trigger: AAAGACACTGCTGCTGAAGGAAGAGCTGACCCTATCGTCTATCCAGTGACCCTGGGCTTTGTTAAGATAAAACTGCTCCCTTCCAGCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025570.8 ENSMUST00000235243.2 ENSMUST00000235853.2 ENSMUST00000237827.2 |
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| 3UTR GCA 90 bp | GGACATCACAAGCCCAAAGGGCTAGCTAGCATCTCTGTAAGCTCCTaGTTCTACTCCACAGGTCTCATTCCTATTCCTTGCTTAAGTGAG | + |
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Preference number: 1 (lower is better) Translates to: GHHKPKGLASISVSS*FYSTGLIPIPCLSE Trigger: CTCACTTAAGCAAGGAATAGGAATGAGACCTGTGGAGTAGAAGCAGGAGCTTACAGAGATGCTAGCTAGCCCTTTGGGCTTGTGATGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025570.8 |
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| 3UTR CCA 90 bp | CCCTCTTTCTGCTCTCATAGAGTAAGCGGGCTCTTTTGGTTTCTATaGATTCATCAGTTCTCTCCTGCCACGGAGGCAAAGGGATTTCAA | + |
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Preference number: 1 (lower is better) Translates to: PSFCSHRVSGLFWFL*IHQFSPATEAKGFQ Trigger: TTGAAATCCCTTTGCCTCCGTGGCAGGAGAGAACTGATGAATCCATAGAAACCAAAAGAGCCCGCTTACTCTATGAGAGCAGAAAGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235853.2 |
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| 3UTR TCA 90 bp | AACAGGCAGATCTCTGTGAATTCAAGGCCAGCCTGGGCTACAGGGTaGCATCCTGTCTCACAAGACAAAACAACCCAATCTTTACTTCAA | + |
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Preference number: 1 (lower is better) Translates to: NRQISVNSRPAWATG*HPVSQDKTTQSLLQ Trigger: TTGAAGTAAAGATTGGGTTGTTTTGTCTTGTGAGACAGGATGTCACCCTGTAGCCCAGGCTGGCCTTGAATTCACAGAGATCTGCCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
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| 3UTR TCA 90 bp | TTCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATCTaGTGCCCTCTTCTGGTGTATCTGAAGAGAATAATGGTGTACTCA | + |
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Preference number: 1 (lower is better) Translates to: FPATTWWLTTIRNEI*CPLLVYLKRIMVYS Trigger: TGAGTACACCATTATTCTCTTCAGATACACCAGAAGAGGGCATCAGATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
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| 3UTR GCA 90 bp | TGTAACATGCCCGTGATAAATGGGGAAGGTGCTACGCAATTCCTGTaGGCTCCTTACAGTCCAGATGCTTCTATATATAAACCCTGTCTG | + |
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Preference number: 1 (lower is better) Translates to: CNMPVINGEGATQFL*APYSPDASIYKPCL Trigger: CAGACAGGGTTTATATATAGAAGCATCTGGACTGTAAGGAGCGCACAGGAATTGCGTAGCACCTTCCCCATTTATCACGGGCATGTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025570.8 |
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| 3UTR TCA 90 bp | CTCCTGCTTCTACTCCACAGGTCTCATTCCTATTCCTTGCTTAAGTaGGAGCTAAACTTTTCCATCAAAGGACTTGTTACCAGGGTAGGT | + |
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Preference number: 1 (lower is better) Translates to: LLLLLHRSHSYSLLK*ELNFSIKGLVTRVG Trigger: ACCTACCCTGGTAACAAGTCCTTTGATGGAAAAGTTTAGCTCTCACTTAAGCAAGGAATAGGAATGAGACCTGTGGAGTAGAAGCAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025570.8 |
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| 3UTR TCA 90 bp | GTTCTGGAAAAGCACTCTGTGGTTATTTTAATAAGCTCAGCCTTCTaGCTTTCAGATGACTGCCCTGTGTGTATATGTGCAGTTGATGAT | + |
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Preference number: 1 (lower is better) Translates to: VLEKHSVVILISSAF*LSDDCPVCICAVDD Trigger: ATCATCAACTGCACATATACACACAGGGCAGTCATCTGAAAGTCAGAAGGCTGAGCTTATTAAAATAACCACAGAGTGCTTTTCCAGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025570.8 |
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| 3UTR GCA 90 bp | AGAGTTATGAGATACCATATGGCCTGCAGTACCAAAAATATTTACTaGCTGGCCCATATGGATAAAGTGTGGCATAAAAGTGAACATACT | + |
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Preference number: 1 (lower is better) Translates to: RVMRYHMACSTKNIY*LAHMDKVWHKSEHT Trigger: AGTATGTTCACTTTTATGCCACACTTTATCCATATGGGCCAGGCAGTAAATATTTTTGGTACTGCAGGCCATATGGTATCTCATAACTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
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| 3UTR GCA 90 bp | CTGCTACAGATAAAGTTATATAGAGTTATGAGATACCATATGGCCTaGAGTACCAAAAATATTTACTGCCTGGCCCATATGGATAAAGTG | + |
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Preference number: 1 (lower is better) Translates to: LLQIKLYRVMRYHMA*STKNIYCLAHMDKV Trigger: CACTTTATCCATATGGGCCAGGCAGTAAATATTTTTGGTACTGCAGGCCATATGGTATCTCATAACTCTATATAACTTTATCTGTAGCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
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| 3UTR GCA 90 bp | AAATATAGGCAGTCATTTGTAGACCTGCTGCTATCTGTGGTTGAGTaGATGCTGCTACAGATAAAGTTATATAGAGTTATGAGATACCAT | + |
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Preference number: 1 (lower is better) Translates to: KYRQSFVDLLLSVVE*MLLQIKLYRVMRYH Trigger: ATGGTATCTCATAACTCTATATAACTTTATCTGTAGCAGCATGCACTCAACCACAGATAGCAGCAGGTCTACAAATGACTGCCTATATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
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| 3UTR GCA 90 bp | TTTAGTCATAACTGCCTACACCTGAAAACCCTAAAATCCTATTACTaGTCAGTGGATAAATTGTATAATCCACACACCGGAATATTAGTC | + |
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Preference number: 1 (lower is better) Translates to: FSHNCLHLKTLKSYY*SVDKLYNPHTGILV Trigger: GACTAATATTCCGGTGTGTGGATTATACAATTTATCCACTGAGCAGTAATAGGATTTTAGGGTTTTCAGGTGTAGGCAGTTATGACTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCAGGGTCACTGGATAGACGATAGGGTCAGCTCTTCCTTCAGCAGCAGTGTCGAGATACTCCAGATCTaGGGCACGCAGTCTCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: AQGHWIDDRVSSSFSSSVEILQI*GTQSLL Trigger: GAGCAGAGACTGCGTGCCCCAGATCTGGAGTATCTC...GACACTGCTGCTGAAGGAAGAGCTGACCCTATCGTCTATCCAGTGACCCTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235243.2 ENSMUST00000235853.2 ENSMUST00000237827.2 |
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| 3UTR CAA 90 bp | CTTTCTCTAGCCAACACTCACATACCGGCCAGAGTGACTGCCTCTTaGCAGCTGAGGGCAGAGCTCCTGCAGAAAGGATGCCTTCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: LSLANTHIPARVTAS*QLRAELLQKGCLQD Trigger: GTCCTGAAGGCATCCTTTCTGCAGGAGCTCTGCCCTCAGCTGCAAAGAGGCAGTCACTCTGGCCGGTATGTGAGTGTTGGCTAGAGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025570.8 ENSMUST00000235853.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCCTATAGTGCCCTCTTGTGGCAGACCTGCAGCACAGCACTTAGCAGCCAGGATTTTCCACAGGTTCTaGGTTCAATTCCCAGCAACC | + |
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Preference number: 2 (lower is better) Translates to: SPIVPSCGRPAAQHLAARIFHRF*VQFPAT Trigger: GGTTGCTGGGAATTGAACTCAGAACCTGTGGAAAAT...CCTGGCTGCTAAGTGCTGTGCTGCAGGTCTGCCACAAGAGGGCACTATAGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237827.2 |
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| 3UTR-3UTR GCA 90 bp | ACACCATGCTACCCTGCATCTTCTTACCAGAGCTACAGTGGGGCCTGGGGGATTAGCTCTCCTAGCTACTaGATTCTAACCGTGTGGTCC | + |
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Preference number: 2 (lower is better) Translates to: TPCYPASSYQSYSGAWGISSPSY*ILTVWS Trigger: GGACCACACGGTTAGAATGCAGTAGCTAGGAGAGCT...AATCCCCCAGGCCCCACTGTAGCTCTGGTAAGAAGATGCAGGGTAGCATGGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025570.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCTTTGGTGCCTCATTCAGCTTGCTGTGCCTTTGATGGCTCAGTTCAGGGGCTCATCAGTTCTCTCCTaGCACGGAGGCAAAGGGATT | + |
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Preference number: 2 (lower is better) Translates to: LLWCLIQLAVPLMAQFRGSSVLS*HGGKGI Trigger: AATCCCTTTGCCTCCGTGGCAGGAGAGAACTGATGA...GCCCCTGAACTGAGCCATCAAAGGCACAGCAAGCTGAATGAGGCACCAAAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235853.2 |
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| 3UTR-3UTR CCA 90 bp | TTACCCACCCAGGCTTCTCAGTTCTGGCCTGCTTTCTCTAGCCAACACTCACATTCCCGCTTCCCTCCCTaGCCAGGGAACTTTTTCCTA | + |
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Preference number: 2 (lower is better) Translates to: LPTQASQFWPAFSSQHSHSRFPP*PGNFFL Trigger: TAGGAAAAAGTTCCCTGGCCAGGGAGGGAAGCGGGA...ATGTGAGTGTTGGCTAGAGAAAGCAGGCCAGAACTGAGAAGCCTGGGTGGGTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025570.8 ENSMUST00000235853.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCTGCTTTGGTGCCTCATTCAGCTTGCTGTGCCTTTGATGGCTCAGTTCAGGGAGATACTCCAGATCTaGGGCACGCAGTCTCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: FLLWCLIQLAVPLMAQFREILQI*GTQSLL Trigger: GAGCAGAGACTGCGTGCCCCAGATCTGGAGTATCTC...CCTGAACTGAGCCATCAAAGGCACAGCAAGCTGAATGAGGCACCAAAGCAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235243.2 ENSMUST00000235853.2 ENSMUST00000237827.2 |
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| 3UTR CAA 90 bp | TGCCTCATTCAGCTTGCTGTGCCTTTGATGGCTCAGTTCAGGGGCTaGGACCGACATTCCTTAGCAAAGGACTTATCACGCTGGAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: CLIQLAVPLMAQFRG*DRHSLAKDLSRWKG Trigger: TCCCTTCCAGCGTGATAAGTCCTTTGCTAAGGAATGTCGGTCCAAGCCCCTGAACTGAGCCATCAAAGGCACAGCAAGCTGAATGAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025570.8 ENSMUST00000235243.2 ENSMUST00000235853.2 ENSMUST00000237827.2 |
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| 3UTR CAA 90 bp | CACTTTTCACCCGGTTCCCAGCCTAGTCTTCACTCTTCCTTCCCTTaGATCTTGGGAGCTTCCCGTGCTTTGCTGCTACATTCCCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: HFSPGSQPSLHSSFP*ILGASRALLLHSLS Trigger: TGAGAGGGAATGTAGCAGCAAAGCACGGGAAGCTCCCAAGATCAAAGGGAAGGAAGAGTGAAGACTAGGCTGGGAACCGGGTGAAAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCTGCTTTGGTGCCTCATTCAGCTTGCTGTGCCTTTGATGGCTCAGTTCAGGTTGTACTGTTGGGGCTaGGGCAGCAGAATCACTTCC | + |
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Preference number: 2 (lower is better) Translates to: FLLWCLIQLAVPLMAQFRLYCWG*GSRITS Trigger: GGAAGTGATTCTGCTGCCTCAGCCCCAACAGTACAA...CCTGAACTGAGCCATCAAAGGCACAGCAAGCTGAATGAGGCACCAAAGCAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025570.8 ENSMUST00000235243.2 ENSMUST00000235853.2 ENSMUST00000237827.2 |
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| 3UTR-3UTR GCA 90 bp | AGCAGGAGGCCAAGGTCAGTGCCAGAAGCAGTTTCTATCCATATACTGACCACCGGAGGCCAAGGTCAGTaGCAGAAGCAGTTTCTATCC | + |
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Preference number: 2 (lower is better) Translates to: SRRPRSVPEAVSIHILTTGGQGQ*QKQFLS Trigger: GGATAGAAACTGCTTCTGGCACTGACCTTGGCCTCC...GGTGGTCAGTATATGGATAGAAACTGCTTCTGGCACTGACCTTGGCCTCCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025570.8 ENSMUST00000235222.2 ENSMUST00000235243.2 ENSMUST00000235853.2 ENSMUST00000237827.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCTTTGGTGCCTCATTCAGCTTGCTGTGCCTTTGATGGCTCAGTTCAGGGGCAGCCCACAATATTCCTaGTTTGGTGCCTCATTCAGC | + |
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Preference number: 2 (lower is better) Translates to: LLWCLIQLAVPLMAQFRGSPQYS*FGASFS Trigger: GCTGAATGAGGCACCAAAGCAGGAATATTGTGGGCT...GCCCCTGAACTGAGCCATCAAAGGCACAGCAAGCTGAATGAGGCACCAAAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025570.8 ENSMUST00000235243.2 ENSMUST00000235853.2 ENSMUST00000237827.2 |
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| 3UTR-3UTR GCA 90 bp | GGGACCACTGTGGAAGAAGGGACAGACCAGTTTCAAGAGCCAGAGGACCAAGACAGGTGTGTGCCACCATaGCCAGCAAGAATGATCTTT | + |
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Preference number: 2 (lower is better) Translates to: GTTVEEGTDQFQEPEDQDRCVPP*PARMIF Trigger: AAAGATCATTCTTGCTGGGCATGGTGGCACACACCT...GTCTTGGTCCTCTGGCTCTTGAAACTGGTCTGTCCCTTCTTCCACAGTGGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGATGACACAAGCCAGCCGCCTGGAAGGAAAACCACTCCTCTAGAAGCAAGCTATAGTGCCCTCTTGTaGCAGACCTGCAGCACAGCA | + |
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Preference number: 2 (lower is better) Translates to: KDDTSQPPGRKTTPLEASYSALL*QTCSTA Trigger: TGCTGTGCTGCAGGTCTGCCACAAGAGGGCACTATA...GCTTGCTTCTAGAGGAGTGGTTTTCCTTCCAGGCGGCTGGCTTGTGTCATCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025570.8 |
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| 3UTR-3UTR CCA 90 bp | CACTTCCCCTATAGTGCCCTCTTGTGGCAGACCTGCAGCACAGCACTTAGCAGCCTGGTTTTGCTTCTGTaGCCCAGTAGTAAATATCCC | + |
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Preference number: 2 (lower is better) Translates to: HFPYSALLWQTCSTALSSLVLLL*PSSKYP Trigger: GGGATATTTACTACTGGGCCACAGAAGCAAAACCAG...GCTGCTAAGTGCTGTGCTGCAGGTCTGCCACAAGAGGGCACTATAGGGGAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235243.2 ENSMUST00000235853.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTTGTCCTGCAGGAAGCAGCCCAGCACTTTTCACCCGGTTCCCAGCCTAGTCGAGGAAGAACACACTTaGGAAGATATGACTTTAGAC | + |
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Preference number: 2 (lower is better) Translates to: GLSCRKQPSTFHPVPSLVEEEHT*EDMTLD Trigger: GTCTAAAGTCATATCTTCCCAAGTGTGTTCTTCCTC...GACTAGGCTGGGAACCGGGTGAAAAGTGCTGGGCTGCTTCCTGCAGGACAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
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| 3UTR CAA 90 bp | CCCACAATATTCCTGCTTTGGTGCCTCATTCAGCTTGCTGTGCCTTaGATGGCTCAGTTCAGGGGCTTGGACCGACATTCCTTAGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: PTIFLLWCLIQLAVP*MAQFRGLDRHSLAK Trigger: CTTTGCTAAGGAATGTCGGTCCAAGCCCCTGAACTGAGCCATCAAAGGCACAGCAAGCTGAATGAGGCACCAAAGCAGGAATATTGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025570.8 ENSMUST00000235243.2 ENSMUST00000235853.2 ENSMUST00000237827.2 |
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| 3UTR-3UTR GCA 90 bp | ACATGTCTTTCCTGGGAGAGATTCAAGAGTCTAAGGAGAAGCAGGAGGCCAAGGGGAGGCCAAGGTCAGTaGCAGAAGCAGTTTCTATCC | + |
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Preference number: 2 (lower is better) Translates to: TCLSWERFKSLRRSRRPRGGQGQ*QKQFLS Trigger: GGATAGAAACTGCTTCTGGCACTGACCTTGGCCTCC...CCTTGGCCTCCTGCTTCTCCTTAGACTCTTGAATCTCTCCCAGGAAAGACATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025570.8 ENSMUST00000235222.2 ENSMUST00000235243.2 ENSMUST00000235853.2 ENSMUST00000237827.2 |
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| 3UTR-3UTR GCA 90 bp | ACGATAGGGTCAGCTCTTCCTTCAGCAGCAGTGTCTTTTGTACTGTTGGGGCTGTTCTGGGGCTGGTTTTaGTTCTGTGGCCCAGTAGTA | + |
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Preference number: 2 (lower is better) Translates to: TIGSALPSAAVSFVLLGLFWGWF*FCGPVV Trigger: TACTACTGGGCCACAGAAGCAAAACCAGCCCCAGAA...CAGCCCCAACAGTACAAAAGACACTGCTGCTGAAGGAAGAGCTGACCCTATCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000235243.2 ENSMUST00000235853.2 |
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| 3UTR-3UTR GCA 90 bp | AGCAGGAGGCCAAGGTCAGTGCCAGAAGCAGTTTCTATCCATATACTGACCACCTTCTGGGGCTGGTTTTaGTTCTGTGGCCCAGTAGTA | + |
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Preference number: 2 (lower is better) Translates to: SRRPRSVPEAVSIHILTTFWGWF*FCGPVV Trigger: TACTACTGGGCCACAGAAGCAAAACCAGCCCCAGAA...GGTGGTCAGTATATGGATAGAAACTGCTTCTGGCACTGACCTTGGCCTCCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235243.2 ENSMUST00000235853.2 |
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| 3UTR-3UTR GCA 90 bp | CTGACCACCATGACAGGCAGTGGTACCCAGCTTAATGAGGCTTTTCAAAGAGATGGAGGCCAAGGTCAGTaGCAGAAGCAGTTTCTATCC | + |
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Preference number: 2 (lower is better) Translates to: LTTMTGSGTQLNEAFQRDGGQGQ*QKQFLS Trigger: GGATAGAAACTGCTTCTGGCACTGACCTTGGCCTCC...ATCTCTTTGAAAAGCCTCATTAAGCTGGGTACCACTGCCTGTCATGGTGGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235243.2 ENSMUST00000235853.2 ENSMUST00000237827.2 |
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| 3UTR-3UTR GCA 90 bp | ACGATAGGGTCAGCTCTTCCTTCAGCAGCAGTGTCTTTTGTACTGTTGGGGCTGGGAGACAGCAGACTGTaGTTTGACAGTGCCTATGAA | + |
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Preference number: 2 (lower is better) Translates to: TIGSALPSAAVSFVLLGLGDSRL*FDSAYE Trigger: TTCATAGGCACTGTCAAAGCACAGTCTGCTGTCTCC...CAGCCCCAACAGTACAAAAGACACTGCTGCTGAAGGAAGAGCTGACCCTATCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235853.2 |
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| 3UTR-3UTR CCA 90 bp | TCTAAGGAGAAGCAGGAGGCCAAGGTCAGTGCCAGAAGCAGTTTCTATCCATATTATAGTGCCCTCTTGTaGCAGACCTGCAGCACAGCA | + |
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Preference number: 2 (lower is better) Translates to: SKEKQEAKVSARSSFYPYYSALL*QTCSTA Trigger: TGCTGTGCTGCAGGTCTGCCACAAGAGGGCACTATA...ATATGGATAGAAACTGCTTCTGGCACTGACCTTGGCCTCCTGCTTCTCCTTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025570.8 ENSMUST00000235243.2 ENSMUST00000235853.2 ENSMUST00000237827.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGATCCTCTTGAAACTAGAGTTACAGACAGTTGTGAGCTGCTTTGTGGGTGCGAGATACTCCAGATCTaGGGCACGCAGTCTCTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: SDPLETRVTDSCELLCGCEILQI*GTQSLL Trigger: GAGCAGAGACTGCGTGCCCCAGATCTGGAGTATCTC...GCACCCACAAAGCAGCTCACAACTGTCTGTAACTCTAGTTTCAAGAGGATCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235853.2 |
||
| 3UTR-3UTR CCA 90 bp | AGACTGGCCTCAAACTCAAGAGATCAGCCTACCTCTGTTTCCCAAGTACTAGGATTTAATCCCAGCACTTaGGAAGCAGAGGCAGGCGGA | + |
|
Preference number: 2 (lower is better) Translates to: RLASNSRDQPTSVSQVLGFNPST*EAEAGG Trigger: TCCGCCTGCCTCTGCTTCCCAAGTGCTGGGATTAAA...TCCTAGTACTTGGGAAACAGAGGTAGGCTGATCTCTTGAGTTTGAGGCCAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGATAGACGATAGGGTCAGCTCTTCCTTCAGCAGCAGTGTCTTTTGTACTGTTTTGTACTGTTGGGGCTaGGGCAGCAGAATCACTTCC | + |
|
Preference number: 2 (lower is better) Translates to: WIDDRVSSSFSSSVFCTVLYCWG*GSRITS Trigger: GGAAGTGATTCTGCTGCCTCAGCCCCAACAGTACAA...AACAGTACAAAAGACACTGCTGCTGAAGGAAGAGCTGACCCTATCGTCTATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025570.8 ENSMUST00000235243.2 ENSMUST00000235853.2 ENSMUST00000237827.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTTGGTGCCTCATTCAGCTTGCTGTGCCTTTGATGGCTCAGTTCAGGGGCTTGTCAATCATGTCTTTTTaGGAGTCTGTTGGGCTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: LWCLIQLAVPLMAQFRGLSIMSF*ESVGLS Trigger: TGACAGCCCAACAGACTCTCAAAAAGACATGATTGA...CAAGCCCCTGAACTGAGCCATCAAAGGCACAGCAAGCTGAATGAGGCACCAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235853.2 |
||
| 3UTR-3UTR TCA 90 bp | AGACTGGCCTCAAACTCAAGAGATCAGCCTACCTCTGTTTCCCAAGTACTAGGAGGTTCAAACGCTGGGTaGAAAGGAGAAAACCAACCC | + |
|
Preference number: 2 (lower is better) Translates to: RLASNSRDQPTSVSQVLGGSNAG*KGENQP Trigger: GGGTTGGTTTTCTCCTTTTCACCCAGCGTTTGAACC...TCCTAGTACTTGGGAAACAGAGGTAGGCTGATCTCTTGAGTTTGAGGCCAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR-3UTR GCA 90 bp | GCTGGAAGGGAGCAGTTTTATCTTAACAAAGCCCAGGGTCACTGGATAGACGATGTGCCTCATTCAGCTTaGTGTGCCTTTGATGGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: AGREQFYLNKAQGHWIDDVPHSA*CAFDGS Trigger: TGAGCCATCAAAGGCACAGCAAGCTGAATGAGGCAC...ATCGTCTATCCAGTGACCCTGGGCTTTGTTAAGATAAAACTGCTCCCTTCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025570.8 ENSMUST00000235243.2 ENSMUST00000235853.2 ENSMUST00000237827.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTGAATTCCCAACATTCTGTTATCCCAGCCCTGAGGAGGCTGGGATGAAAGGATCACCTAAGTTAGCCTaGGCTCCATCTGTCTCACAA | + |
|
Preference number: 2 (lower is better) Translates to: SEFPTFCYPSPEEAGMKGSPKLA*APSVSQ Trigger: TTGTGAGACAGATGGAGCGCAGGCTAACTTAGGTGA...TCCTTTCATCCCAGCCTCCTCAGGGCTGGGATAACAGAATGTTGGGAATTCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGCACGCAGTCTCTGCTCCTTGTTTTTGTTTTTGGCGAATTCTCTCAGCAATTGTAGAAGCGTCTGAATaGTGTCACACTAGGCAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: GHAVSAPCFCFWRILSAIVEASE*CHTRQG Trigger: CCCTTGCCTAGTGTGACATCATTCAGACGCTTCTAC...AATTGCTGAGAGAATTCGCCAAAAACAAAAACAAGGAGCAGAGACTGCGTGCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000235853.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGACCACTGTGGAAGAAGGGACAGACCAGTTTCAAGAGCCAGAGGACCAAGACGTGTGTCTGTGCACATaGGTATACATATCCATAAAA | + |
|
Preference number: 2 (lower is better) Translates to: GTTVEEGTDQFQEPEDQDVCLCT*VYISIK Trigger: TTTTATGGATATGTATACTCATGTGCACAGACACAC...GTCTTGGTCCTCTGGCTCTTGAAACTGGTCTGTCCCTTCTTCCACAGTGGTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR-3UTR GCA 90 bp | CACGCAGTCTCTGCTCCTTGTTTTTGTTTTTGGCGAATTCTCTCAGCAATTCCAGGAGGCCAAGGTCAGTaGCAGAAGCAGTTTCTATCC | + |
|
Preference number: 2 (lower is better) Translates to: HAVSAPCFCFWRILSAIPGGQGQ*QKQFLS Trigger: GGATAGAAACTGCTTCTGGCACTGACCTTGGCCTCC...TGGAATTGCTGAGAGAATTCGCCAAAAACAAAAACAAGGAGCAGAGACTGCGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000235243.2 ENSMUST00000235853.2 ENSMUST00000237827.2 |
||
| 3UTR-3UTR CCA 90 bp | CACTTCCCCTATAGTGCCCTCTTGTGGCAGACCTGCAGCACAGCACTTAGCAGCCCTTGTTTTTGTTTTTaGCGAATTCTCTCAGCAATT | + |
|
Preference number: 2 (lower is better) Translates to: HFPYSALLWQTCSTALSSPCFCF*RILSAI Trigger: AATTGCTGAGAGAATTCGCCAAAAACAAAAACAAGG...GCTGCTAAGTGCTGTGCTGCAGGTCTGCCACAAGAGGGCACTATAGGGGAAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000235243.2 ENSMUST00000235853.2 ENSMUST00000237827.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCCAAGGGAGGCAATCAACACTCCTACTCATCTATGACATCATTGAACCACAAGTCTCTCCACTGAACTaGCTTGTCCTGCAGGAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: SQGRQSTLLLIYDIIEPQVSPLN*LVLQEA Trigger: TGCTTCCTGCAGGACAAGCCAGTTCAGTGGAGAGAC...TTGTGGTTCAATGATGTCATAGATGAGTAGGAGTGTTGATTGCCTCCCTTGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTGAATTCCCAACATTCTGTTATCCCAGCCCTGAGGAGGCTGGGATGAAAGGATCCCATGCACATGCATaGTCACTTAAACACGAATAC | + |
|
Preference number: 2 (lower is better) Translates to: SEFPTFCYPSPEEAGMKGSHAHA*SLKHEY Trigger: GTATTCGTGTTTAAGTGAGCATGCATGTGCATGGGA...TCCTTTCATCCCAGCCTCCTCAGGGCTGGGATAACAGAATGTTGGGAATTCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGGTGCCTCATTCAGCTTGCTGTGCCTTTGATGGCTCAGTTCAGGGGCTTGGAATTTTCAAATATTTCTaGGGCTGGTTTTGCTTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: LVPHSACCAFDGSVQGLGIFKYF*GWFCFC Trigger: ACAGAAGCAAAACCAGCCCCAGAAATATTTGAAAAT...TCCAAGCCCCTGAACTGAGCCATCAAAGGCACAGCAAGCTGAATGAGGCACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000235243.2 ENSMUST00000235853.2 |
||
| 3UTR-3UTR TCA 90 bp | CACAGAAAGAGTAGTTCTCACCCTCTACCAAGGAAATTTCTCTTTGCAATAGAGCAGATGCTACACCCCTaGAGTCTCACCAACAAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: HRKSSSHPLPRKFLFAIEQMLHP*SLTNKA Trigger: AGCTTTGTTGGTGAGACTTCAGGGGTGTAGCATCTG...CTCTATTGCAAAGAGAAATTTCCTTGGTAGAGGGTGAGAACTACTCTTTCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR-3UTR GCA 90 bp | AGCCCCAAATCCTGGCTTTTTGATCATGGATGCATTGCTGACTCCTTCCAAGGCGAAAGTTTGCCTCAATaGCACAAAGTCAGAAAACTT | + |
|
Preference number: 2 (lower is better) Translates to: SPKSWLFDHGCIADSFQGESLPQ*HKVRKL Trigger: AAGTTTTCTGACTTTGTGGCATTGAGGCAAACTTTC...GCCTTGGAAGGAGTCAGCAATGCATCCATGATCAAAAAGCCAGGATTTGGGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025570.8 ENSMUST00000235853.2 |
||
| 3UTR-3UTR GCA 90 bp | CACAGAAAGAGTAGTTCTCACCCTCTACCAAGGAAATTTCTCTTTGCAATAGAGCAGCTCACTAATGTCTaGAGCTACAACTCCAGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: HRKSSSHPLPRKFLFAIEQLTNV*SYNSRG Trigger: TCCCCTGGAGTTGTAGCTGCAGACATTAGTGAGCTG...CTCTATTGCAAAGAGAAATTTCCTTGGTAGAGGGTGAGAACTACTCTTTCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCCTGCTTTGGTGCCTCATTCAGCTTGCTGTGCCTTTGATGGCTCAGTTCAGGCCTTGTTTTTGTTTTTaGCGAATTCTCTCAGCAATT | + |
|
Preference number: 2 (lower is better) Translates to: FLLWCLIQLAVPLMAQFRPCFCF*RILSAI Trigger: AATTGCTGAGAGAATTCGCCAAAAACAAAAACAAGG...CCTGAACTGAGCCATCAAAGGCACAGCAAGCTGAATGAGGCACCAAAGCAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000235243.2 ENSMUST00000235853.2 ENSMUST00000237827.2 |
||
| 3UTR-3UTR CCA 90 bp | TATCACGCTGGAAGGGAGCAGTTTTATCTTAACAAAGCCCAGGGTCACTGGATAGTAAGCGGGCTCTTTTaGTTTCTATGGATTCATCAG | + |
|
Preference number: 2 (lower is better) Translates to: YHAGREQFYLNKAQGHWIVSGLF*FLWIHQ Trigger: CTGATGAATCCATAGAAACCAAAAGAGCCCGCTTAC...TATCCAGTGACCCTGGGCTTTGTTAAGATAAAACTGCTCCCTTCCAGCGTGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235853.2 |
||
| 3UTR-3UTR TCA 90 bp | AGAGGACCAAGACATTTGCTATTAGATTATATAAACAATGTCAGATGCTACACCACCTTGTCTCTCCACTaGACTGGCTTGTCCTGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: RGPRHLLLDYINNVRCYTTLSLH*TGLSCR Trigger: CCTGCAGGACAAGCCAGTTCAGTGGAGAGACAAGGT...GGTGTAGCATCTGACATTGTTTATATAATCTAATAGCAAATGTCTTGGTCCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGCACCTTTATGGCAGCTCACTAATGTCTGCAGCTACAACTCCAGGGGATTTCAGATACCATATGGCCTaGAGTACCAAAAATATTTAC | + |
|
Preference number: 2 (lower is better) Translates to: QHLYGSSLMSAATTPGDFRYHMA*STKNIY Trigger: GTAAATATTTTTGGTACTGCAGGCCATATGGTATCT...GAAATCCCCTGGAGTTGTAGCTGCAGACATTAGTGAGCTGCCATAAAGGTGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR CAA 90 bp | GGAAGAAGGGACAGACCAGTTTCAAGAGCCAGAGGACCAAGACATTaGCTATTAGATTATATAAACAATGTCAGATGCTACACCCCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: GRRDRPVSRARGPRH*LLDYINNVRCYTPE Trigger: TTCAGGGGTGTAGCATCTGACATTGTTTATATAATCTAATAGCAAATGTCTTGGTCCTCTGGCTCTTGAAACTGGTCTGTCCCTTCTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR-3UTR CCA 90 bp | AGACTGGCCTCAAACTCAAGAGATCAGCCTACCTCTGTTTCCCAAGTACTAGGACCTATTACTGCTCAGTaGATAAATTGTATAATCCAC | + |
|
Preference number: 2 (lower is better) Translates to: RLASNSRDQPTSVSQVLGPITAQ*INCIIH Trigger: GTGGATTATACAATTTATCCACTGAGCAGTAATAGG...TCCTAGTACTTGGGAAACAGAGGTAGGCTGATCTCTTGAGTTTGAGGCCAGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR-3UTR TCA 90 bp | AGAGGACCAAGACATTTGCTATTAGATTATATAAACAATGTCAGATGCTACACCACAATAGGTACTCCCTaGGTCTTACAGATGGCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: RGPRHLLLDYINNVRCYTTIGTP*VLQMAQ Trigger: CTGAGCCATCTGTAAGACTCAGGGAGTACCTATTGT...GGTGTAGCATCTGACATTGTTTATATAATCTAATAGCAAATGTCTTGGTCCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR-3UTR CCA 90 bp | CACAGAAAGAGTAGTTCTCACCCTCTACCAAGGAAATTTCTCTTTGCAATAGAGGAGATAACAGTTAAGTaGTTAAGAGCACTAGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: HRKSSSHPLPRKFLFAIEEITVK*LRALAA Trigger: AGCAGCTAGTGCTCTTAACCACTTAACTGTTATCTC...CTCTATTGCAAAGAGAAATTTCCTTGGTAGAGGGTGAGAACTACTCTTTCTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR-3UTR CCA 90 bp | CCAGTTTCAAGAGCCAGAGGACCAAGACATTTGCTATTAGATTATATAAACAATTTCTCAGCACCTTTATaGCAGCTCACTAATGTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: PVSRARGPRHLLLDYINNFSAPL*QLTNVC Trigger: GCAGACATTAGTGAGCTGCCATAAAGGTGCTGAGAA...ATTGTTTATATAATCTAATAGCAAATGTCTTGGTCCTCTGGCTCTTGAAACTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR-3UTR TCA 90 bp | CCAGTTTCAAGAGCCAGAGGACCAAGACATTTGCTATTAGATTATATAAACAATCAGCTGCCTGTTTTGTaGTGGTTTAAAAGTGAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: PVSRARGPRHLLLDYINNQLPVL*WFKSEN Trigger: GTTCTCACTTTTAAACCATCACAAAACAGGCAGCTG...ATTGTTTATATAATCTAATAGCAAATGTCTTGGTCCTCTGGCTCTTGAAACTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAGGACCAAGACATTTGCTATTAGATTATATAAACAATGTCAGATGCTACACCCTATCTGTGGTTGAGTaGATGCTGCTACAGATAAAG | + |
|
Preference number: 2 (lower is better) Translates to: RGPRHLLLDYINNVRCYTLSVVE*MLLQIK Trigger: CTTTATCTGTAGCAGCATGCACTCAACCACAGATAG...GGTGTAGCATCTGACATTGTTTATATAATCTAATAGCAAATGTCTTGGTCCTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR-3UTR CCA 90 bp | TCACAGAAAACTCATGATGTTGGAGAGCATTACCCTGAAAAAGCTAATCTTCACTATCAAGGTAAAATTTaGATAAGAGCCCTCCATCTT | + |
|
Preference number: 2 (lower is better) Translates to: SQKTHDVGEHYPEKANLHYQGKI*IRALHL Trigger: AAGATGGAGGGCTCTTATCCAAATTTTACCTTGATA...GTGAAGATTAGCTTTTTCAGGGTAATGCTCTCCAACATCATGAGTTTTCTGTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR CCA 72 bp | AGTGGGGCCTGGGGGATTCTGGGTGGATCCTCACTTTaGGAAGTAGCTAGTGGCCTCCTACCTACCACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SGAWGILGGSSL*EVASGLLPTTE Trigger: CTCTGTGGTAGGTAGGAGGCCACTAGCTACTTCCCAAAGTGAGGATCCACCCAGAATCCCCCAGGCCCCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025570.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCCAGGGTCACTGGATAGACGATAGGGTCAGCTCTTCCTTCAGCAGCAGTGTCTTTCTGGGGCTGGTTTaGCTTCTGTGGCCCAGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: AQGHWIDDRVSSSFSSSVFLGLV*LLWPSS Trigger: ACTACTGGGCCACAGAAGCAAAACCAGCCCCAGAAA...GACACTGCTGCTGAAGGAAGAGCTGACCCTATCGTCTATCCAGTGACCCTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235243.2 ENSMUST00000235853.2 |
||
| 3UTR GCA 72 bp | AATCACTTCCCCTATAGTGCCCTCTTGTGGCAGACCTaGAGCACAGCACTTAGCAGCCAGGTAAGGGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: NHFPYSALLWQT*STALSSQVRGL Trigger: CAGACCCCTTACCTGGCTGCTAAGTGCTGTGCTGCAGGTCTGCCACAAGAGGGCACTATAGGGGAAGTGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025570.8 ENSMUST00000235243.2 ENSMUST00000235853.2 ENSMUST00000237827.2 |
||
| 3UTR GCA 72 bp | TCTTTGCAGCTGAGGGCAGAGCTCCTGCAGAAAGGATaGCTTCAGGACTGCACAGCTCTCCTAGCTACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SLQLRAELLQKG*LQDCTALLATA Trigger: TGCAGTAGCTAGGAGAGCTGTGCAGTCCTGAAGGCATCCTTTCTGCAGGAGCTCTGCCCTCAGCTGCAAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025570.8 ENSMUST00000235853.2 |
||
| 3UTR CCA 72 bp | AGGCAGCAGAATCACTTCCCCTATAGTGCCCTCTTGTaGCAGACCTGCAGCACAGCACTTAGCAGCCAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: RQQNHFPYSALL*QTCSTALSSQV Trigger: TACCTGGCTGCTAAGTGCTGTGCTGCAGGTCTGCCACAAGAGGGCACTATAGGGGAAGTGATTCTGCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025570.8 ENSMUST00000235243.2 ENSMUST00000235853.2 ENSMUST00000237827.2 |
||
| 3UTR CCA 72 bp | ACCATGCTACCCTGCATCTTCTTACCAGAGCTACAGTaGGGCCTGGGGGATTCTGGGTGGATCCTCACTTTG | + |
|
Preference number: 3 (lower is better) Translates to: TMLPCIFLPELQ*GLGDSGWILTL Trigger: CAAAGTGAGGATCCACCCAGAATCCCCCAGGCCCCACTGTAGCTCTGGTAAGAAGATGCAGGGTAGCATGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025570.8 |
||
| 3UTR TCA 72 bp | TCCTGCTTTGGTGCCTCATTCAGCTTGCTGTGCCTTTaGTGGCTCAGTTCAGGGGCTTGGACCGACATTCCT | + |
|
Preference number: 3 (lower is better) Translates to: SCFGASFSLLCL*WLSSGAWTDIP Trigger: AGGAATGTCGGTCCAAGCCCCTGAACTGAGCCATCAAAGGCACAGCAAGCTGAATGAGGCACCAAAGCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025570.8 ENSMUST00000235243.2 ENSMUST00000235853.2 ENSMUST00000237827.2 |
||
| 3UTR TCA 72 bp | CCTCTAGAAGAACAGCCAGCCAGTGCTCTTAACCGCTaGGCCATCTCTCCAGCCCCAAATCCTGGCTTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: PLEEQPASALNR*AISPAPNPGFL Trigger: CAAAAAGCCAGGATTTGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGGCTGGCTGTTCTTCTAGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025570.8 ENSMUST00000235853.2 |
||
| 3UTR TCA 72 bp | CAGACAGTTGTGAGCTGCTTTGTGGGTGCTAGGGACTaGATCAGGTCCTCTAGAAGAACAGCCAGCCAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: QTVVSCFVGARD*IRSSRRTASQC Trigger: GCACTGGCTGGCTGTTCTTCTAGAGGACCTGATTCAGTCCCTAGCACCCACAAAGCAGCTCACAACTGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025570.8 ENSMUST00000235853.2 |
||
| 3UTR GCA 72 bp | AGGATGCCTTCAGGACTGCACAGCTCTCCTAGCTACTaGATTCTAACCGTGTGGTCCAGGCTGGCCTCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: RMPSGLHSSPSY*ILTVWSRLASN Trigger: ATTTGAGGCCAGCCTGGACCACACGGTTAGAATGCAGTAGCTAGGAGAGCTGTGCAGTCCTGAAGGCATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025570.8 ENSMUST00000235853.2 |
||
| 3UTR GCA 72 bp | CATAACCACCATGCTACACTGTACACCATGCTACCCTaGATCTTCTTACCAGAGCTACAGTGGGGCCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: HNHHATLYTMLP*IFLPELQWGLG Trigger: CCCCAGGCCCCACTGTAGCTCTGGTAAGAAGATGCAGGGTAGCATGGTGTACAGTGTAGCATGGTGGTTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025570.8 |
||
| 3UTR TCA 72 bp | GTCTGTTGGGCTGTCACCTCTGTAGAAGCGTCTGAATaGTGTCACACTAGGCAAGGGAGACAGCAGACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: VCWAVTSVEASE*CHTRQGRQQTV Trigger: CACAGTCTGCTGTCTCCCTTGCCTAGTGTGACATCATTCAGACGCTTCTACAGAGGTGACAGCCCAACAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235853.2 |
||
| 3UTR GCA 72 bp | GCCCACAATATTCCTGCTTTGGTGCCTCATTCAGCTTaGTGTGCCTTTGATGGCTCAGTTCAGGGGCTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: AHNIPALVPHSA*CAFDGSVQGLG Trigger: TCCAAGCCCCTGAACTGAGCCATCAAAGGCACAGCAAGCTGAATGAGGCACCAAAGCAGGAATATTGTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025570.8 ENSMUST00000235243.2 ENSMUST00000235853.2 ENSMUST00000237827.2 |
||
| 3UTR-3UTR CAA 90 bp | CCGCTTCCCTCCCTGGCCAGGGAACTTTTTCCTATAGCTCTTGTAGTTACCCACGTGTCTTTTGTACTGTaGGGGCTGAGGCAGCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: PLPSLARELFPIALVVTHVSFVL*GLRQQN Trigger: ATTCTGCTGCCTCAGCCCCAACAGTACAAAAGACAC...GTGGGTAACTACAAGAGCTATAGGAAAAAGTTCCCTGGCCAGGGAGGGAAGCGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025570.8 ENSMUST00000235853.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGCAGCAGTGTCTTTTGTACTGTTGGGGCTGAGGCAGCAGAATCACTTCCCGTGTCTTTTGTACTGTaGGGGCTGAGGCAGCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: FSSSVFCTVGAEAAESLPVSFVL*GLRQQN Trigger: ATTCTGCTGCCTCAGCCCCAACAGTACAAAAGACAC...GGGAAGTGATTCTGCTGCCTCAGCCCCAACAGTACAAAAGACACTGCTGCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000025570.8 ENSMUST00000235243.2 ENSMUST00000235853.2 ENSMUST00000237827.2 |
||
| 3UTR TCA 72 bp | GTTAGAAGACAGGCTCTAAGTCTCAGGGTGAGGCTTTaGACAAAGGCTCCTGTCTTCCCATGCTATTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: VRRQALSLRVRL*TKAPVFPCYSG Trigger: CCCAGAATAGCATGGGAAGACAGGAGCCTTTGTTCAAAGCCTCACCCTGAGACTTAGAGCCTGTCTTCTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025570.8 |
||
| 3UTR GCA 72 bp | CTTGGACTCATAACCACCATGCTACACTGTACACCATaGTACCCTGCATCTTCTTACCAGAGCTACAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LGLITTMLHCTP*YPASSYQSYSG Trigger: CCCACTGTAGCTCTGGTAAGAAGATGCAGGGTAGCATGGTGTACAGTGTAGCATGGTGGTTATGAGTCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025570.8 |
||
| 3UTR GCA 72 bp | AAGCCCAAAGGGCTAGCTAGCATCTCTGTAAGCTCCTaGTTCTACTCCACAGGTCTCATTCCTATTCCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: KPKGLASISVSS*FYSTGLIPIPC Trigger: GCAAGGAATAGGAATGAGACCTGTGGAGTAGAAGCAGGAGCTTACAGAGATGCTAGCTAGCCCTTTGGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025570.8 |
||
| 3UTR GCA 72 bp | AGTCTTACAGATGGCTCAGCGGTTAAGAGCACCAACTaGTCTTCCCAAGGTCCTGAGTTCAATTCCCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: SLTDGSAVKSTN*SSQGPEFNSQQ Trigger: TTGCTGGGAATTGAACTCAGGACCTTGGGAAGAGCAGTTGGTGCTCTTAACCGCTGAGCCATCTGTAAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR CCA 72 bp | AGGGAGCAGTTTTATCTTAACAAAGCCCAGGGTCACTaGATAGACGATAGGGTCAGCTCTTCCTTCAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: REQFYLNKAQGH*IDDRVSSSFSS Trigger: GCTGCTGAAGGAAGAGCTGACCCTATCGTCTATCCAGTGACCCTGGGCTTTGTTAAGATAAAACTGCTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025570.8 ENSMUST00000235243.2 ENSMUST00000235853.2 ENSMUST00000237827.2 |
||
| 3UTR CCA 72 bp | TTCCAGAGGACCCAGGTTCAATTCTCAGCACCTTTATaGCAGCTCACTAATGTCTGCAGCTACAACTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: FQRTQVQFSAPL*QLTNVCSYNSR Trigger: CCTGGAGTTGTAGCTGCAGACATTAGTGAGCTGCCATAAAGGTGCTGAGAATTGAACCTGGGTCCTCTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR CCA 72 bp | AACACAACTCCTACACCTAAGATTCAGGGACCACTGTaGAAGAAGGGACAGACCAGTTTCAAGAGCCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: NTTPTPKIQGPL*KKGQTSFKSQR Trigger: CCTCTGGCTCTTGAAACTGGTCTGTCCCTTCTTCCACAGTGGTCCCTGAATCTTAGGTGTAGGAGTTGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCCTGCTTTGGTGCCTCATTCAGCTTGCTGTGCCTTTGATGGCTCAGTTCAGGCGCAGTCTCTGCTCCTaGTTTTTGTTTTTGGCGAAT | + |
|
Preference number: 3 (lower is better) Translates to: FLLWCLIQLAVPLMAQFRRSLCS*FLFLAN Trigger: ATTCGCCAAAAACAAAAACAAGGAGCAGAGACTGCG...CCTGAACTGAGCCATCAAAGGCACAGCAAGCTGAATGAGGCACCAAAGCAGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000235243.2 ENSMUST00000235853.2 ENSMUST00000237827.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGCAGCAGTGTCTTTTGTACTGTTGGGGCTGAGGCAGCAGAATCACTTCCCCGCAGTCTCTGCTCCTaGTTTTTGTTTTTGGCGAAT | + |
|
Preference number: 3 (lower is better) Translates to: FSSSVFCTVGAEAAESLPRSLCS*FLFLAN Trigger: ATTCGCCAAAAACAAAAACAAGGAGCAGAGACTGCG...GGGAAGTGATTCTGCTGCCTCAGCCCCAACAGTACAAAAGACACTGCTGCTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 3 transcripts: ENSMUST00000235243.2 ENSMUST00000235853.2 ENSMUST00000237827.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCCAGCCCCAAATCCTGGCTTTTTGATCATGGATGCATTGCTGACTCCTTCCTTTTTGAGAGTCTGTaGGGCTGTCACCTCTGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: LSSPKSWLFDHGCIADSFLFESL*GCHLCR Trigger: TCTACAGAGGTGACAGCCCAACAGACTCTCAAAAAG...GAAGGAGTCAGCAATGCATCCATGATCAAAAAGCCAGGATTTGGGGCTGGAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000235853.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTGGTGCCTCATTCAGCTTGCTGTGCCTTTGATGGCTCAGTTCAGGGGCTTAGTAAGCGGGCTCTTTaGGTTTCTATGGATTCATCA | + |
|
Preference number: 3 (lower is better) Translates to: ALVPHSACCAFDGSVQGLSKRAL*VSMDSS Trigger: TGATGAATCCATAGAAACCAAAAGAGCCCGCTTACT...AAGCCCCTGAACTGAGCCATCAAAGGCACAGCAAGCTGAATGAGGCACCAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235853.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCCAAGGGAGGCAATCAACACTCCTACTCATCTATGACATCATTGAACCACAAAAGGCAGAAAAGGCCTaGGTGCAAGGCCTGATGACC | + |
|
Preference number: 3 (lower is better) Translates to: SQGRQSTLLLIYDIIEPQKAEKA*VQGLMT Trigger: GGTCATCAGGCCTTGCACCAAGGCCTTTTCTGCCTT...TTGTGGTTCAATGATGTCATAGATGAGTAGGAGTGTTGATTGCCTCCCTTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR TCA 72 bp | ATCTCTGTGAATTCAAGGCCAGCCTGGGCTACAGGGTaGCATCCTGTCTCACAAGACAAAACAACCCAATCT | + |
|
Preference number: 3 (lower is better) Translates to: ISVNSRPAWATG*HPVSQDKTTQS Trigger: AGATTGGGTTGTTTTGTCTTGTGAGACAGGATGTCACCCTGTAGCCCAGGCTGGCCTTGAATTCACAGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR CCA 72 bp | CATGCACAGCTTAGCAATAACCAACCGTCCTCTAATTaGACTGAAGAGCTGCTCAGCAAGAGGGAAACCATG | + |
|
Preference number: 3 (lower is better) Translates to: HAQLSNNQPSSN*TEELLSKRETM Trigger: CATGGTTTCCCTCTTGCTGAGCAGCTCTTCAGTCCAATTAGAGGACGGTTGGTTATTGCTAAGCTGTGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAGAATCACTTCCCCTATAGTGCCCTCTTGTGGCAGACCTGCAGCACAGCATCCTTGTTTTTGTTTTaGGCGAATTCTCTCAGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: QQNHFPYSALLWQTCSTASLFLF*ANSLSN Trigger: ATTGCTGAGAGAATTCGCCAAAAACAAAAACAAGGA...TGCTGTGCTGCAGGTCTGCCACAAGAGGGCACTATAGGGGAAGTGATTCTGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000235243.2 ENSMUST00000235853.2 ENSMUST00000237827.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGCAGCAGAATCACTTCCCCTATAGTGCCCTCTTGTGGCAGACCTGCAGCACATCCTTGTTTTTGTTTTaGGCGAATTCTCTCAGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: RQQNHFPYSALLWQTCSTSLFLF*ANSLSN Trigger: ATTGCTGAGAGAATTCGCCAAAAACAAAAACAAGGA...TGTGCTGCAGGTCTGCCACAAGAGGGCACTATAGGGGAAGTGATTCTGCTGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000235243.2 ENSMUST00000235853.2 ENSMUST00000237827.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCCAAGGGAGGCAATCAACACTCCTACTCATCTATGACATCATTGAACCACAACACTCTTCCTTCCCTTaGATCTTGGGAGCTTCCCGT | + |
|
Preference number: 3 (lower is better) Translates to: SQGRQSTLLLIYDIIEPQHSSFP*ILGASR Trigger: ACGGGAAGCTCCCAAGATCAAAGGGAAGGAAGAGTG...TTGTGGTTCAATGATGTCATAGATGAGTAGGAGTGTTGATTGCCTCCCTTGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCCCCAAATCCTGGCTTTTTGATCATGGATGCATTGCTGACTCCTTCCAAGGCCTGTGTCAGATCCTCTaGAAACTAGAGTTACAGACA | + |
|
Preference number: 3 (lower is better) Translates to: SPKSWLFDHGCIADSFQGLCQIL*KLELQT Trigger: TGTCTGTAACTCTAGTTTCAAGAGGATCTGACACAG...GCCTTGGAAGGAGTCAGCAATGCATCCATGATCAAAAAGCCAGGATTTGGGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025570.8 ENSMUST00000235853.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGAAGCAGGAGGCCAAGGTCAGTGCCAGAAGCAGTTTCTATCCATATACTGACTTCAATCATGTCTTTTaGAGAGTCTGTTGGGCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: EKQEAKVSARSSFYPYTDFNHVF*RVCWAV Trigger: GACAGCCCAACAGACTCTCAAAAAGACATGATTGAA...GTCAGTATATGGATAGAAACTGCTTCTGGCACTGACCTTGGCCTCCTGCTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235853.2 |
||
| 3UTR GCA 72 bp | GCAATAACCAACCGTCCTCTAATTGGACTGAAGAGCTaGTCAGCAAGAGGGAAACCATGCCTGGTACTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: AITNRPLIGLKS*SARGKPCLVLK Trigger: TTTTAGTACCAGGCATGGTTTCCCTCTTGCTGAGCAGCTCTTCAGTCCAATTAGAGGACGGTTGGTTATTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTCCAGATGCTTCTATATATAAACCCTGTCTGTTTAGCACCTCCATCCCCCTACACAATATTCCTGCTTaGGTGCCTCATTCAGCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: SPDASIYKPCLFSTSIPLHNIPA*VPHSAC Trigger: GCAAGCTGAATGAGGCACCAAAGCAGGAATATTGTG...TAGGGGGATGGAGGTGCTAAACAGACAGGGTTTATATATAGAAGCATCTGGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025570.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCTGCTTTGGTGCCTCATTCAGCTTGCTGTGCCTTTGATGGCTCAGTTCAGGTCCTTGTTTTTGTTTTaGGCGAATTCTCTCAGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: FLLWCLIQLAVPLMAQFRSLFLF*ANSLSN Trigger: ATTGCTGAGAGAATTCGCCAAAAACAAAAACAAGGA...CCTGAACTGAGCCATCAAAGGCACAGCAAGCTGAATGAGGCACCAAAGCAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000235243.2 ENSMUST00000235853.2 ENSMUST00000237827.2 |
||
| 3UTR TCA 72 bp | ACCACATGGTGGCTCACAACCATCCGTAATGAGATCTaGTGCCCTCTTCTGGTGTATCTGAAGAGAATAATG | + |
|
Preference number: 3 (lower is better) Translates to: TTWWLTTIRNEI*CPLLVYLKRIM Trigger: CATTATTCTCTTCAGATACACCAGAAGAGGGCATCAGATCTCATTACGGATGGTTGTGAGCCACCATGTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR GCA 72 bp | CCCGTGATAAATGGGGAAGGTGCTACGCAATTCCTGTaGGCTCCTTACAGTCCAGATGCTTCTATATATAAA | + |
|
Preference number: 3 (lower is better) Translates to: PVINGEGATQFL*APYSPDASIYK Trigger: TTTATATATAGAAGCATCTGGACTGTAAGGAGCGCACAGGAATTGCGTAGCACCTTCCCCATTTATCACGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025570.8 |
||
| 3UTR GCA 72 bp | CAATTCTCAGCACCTTTATGGCAGCTCACTAATGTCTaGAGCTACAACTCCAGGGGATTTCACACCTTCATA | + |
|
Preference number: 3 (lower is better) Translates to: QFSAPLWQLTNV*SYNSRGFHTFI Trigger: TATGAAGGTGTGAAATCCCCTGGAGTTGTAGCTGCAGACATTAGTGAGCTGCCATAAAGGTGCTGAGAATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR CCA 72 bp | AAGTTTATCCTGCAGCTAAGCAATAGAGCAAAGGCTTaGACTCATAACCACCATGCTACACTGTACACCATG | + |
|
Preference number: 3 (lower is better) Translates to: KFILQLSNRAKA*THNHHATLYTM Trigger: CATGGTGTACAGTGTAGCATGGTGGTTATGAGTCCAAGCCTTTGCTCTATTGCTTAGCTGCAGGATAAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025570.8 |
||
| 3UTR GCA 72 bp | GCTCTTTTGGTTTCTATGGATTCATCAGTTCTCTCCTaGCACGGAGGCAAAGGGATTTCAATCATGTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: ALLVSMDSSVLS*HGGKGISIMSF Trigger: AAAAGACATGATTGAAATCCCTTTGCCTCCGTGGCAGGAGAGAACTGATGAATCCATAGAAACCAAAAGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235853.2 |
||
| 3UTR CCA 72 bp | AGCTTAATGAGGCTTTTCAAAGAGATACTCCAGATCTaGGGCACGCAGTCTCTGCTCCTTGTTTTTGTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SLMRLFKEILQI*GTQSLLLVFVF Trigger: AAAAACAAAAACAAGGAGCAGAGACTGCGTGCCCCAGATCTGGAGTATCTCTTTGAAAAGCCTCATTAAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000235243.2 ENSMUST00000235853.2 ENSMUST00000237827.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCCAAGGGAGGCAATCAACACTCCTACTCATCTATGACATCATTGAACCACAAAGAGGAAGAACACACTaGGGAAGATATGACTTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: SQGRQSTLLLIYDIIEPQRGRTH*GRYDFR Trigger: TCTAAAGTCATATCTTCCCAAGTGTGTTCTTCCTCT...TTGTGGTTCAATGATGTCATAGATGAGTAGGAGTGTTGATTGCCTCCCTTGGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR-3UTR CAA 90 bp | CCACACACCGGAATATTAGTCAACAATACAAAAGAACAAAGTACTGACATAAGTCAAGGCCTGATGACCTaGGTTCAAACGCTGGGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: PHTGILVNNTKEQSTDISQGLMT*VQTLGE Trigger: TTCACCCAGCGTTTGAACCAAGGTCATCAGGCCTTG...ACTTATGTCAGTACTTTGTTCTTTTGTATTGTTGACTAATATTCCGGTGTGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR CCA 72 bp | ACCATATGGCCTGCAGTACCAAAAATATTTACTGCCTaGCCCATATGGATAAAGTGTGGCATAAAAGTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: TIWPAVPKIFTA*PIWIKCGIKVN Trigger: GTTCACTTTTATGCCACACTTTATCCATATGGGCCAGGCAGTAAATATTTTTGGTACTGCAGGCCATATGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCCAAGGGAGGCAATCAACACTCCTACTCATCTATGACATCATTGAACCACAATGGTACATATTGTCCTaGTTGTTTTGTCTTTCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: SQGRQSTLLLIYDIIEPQWYILS*LFCLSQ Trigger: TTGGGAAAGACAAAACAACAAGGACAATATGTACCA...TTGTGGTTCAATGATGTCATAGATGAGTAGGAGTGTTGATTGCCTCCCTTGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR TCA 72 bp | AAATATCATAAAAATAGAAGCACAATAGGTACTCCCTaGGTCTTACAGATGGCTCAGCGGTTAAGAGCACCA | + |
|
Preference number: 3 (lower is better) Translates to: KYHKNRSTIGTP*VLQMAQRLRAP Trigger: TGGTGCTCTTAACCGCTGAGCCATCTGTAAGACTCAGGGAGTACCTATTGTGCTTCTATTTTTATGATATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR GCA 72 bp | AACTGCCTACACCTGAAAACCCTAAAATCCTATTACTaGTCAGTGGATAAATTGTATAATCCACACACCGGA | + |
|
Preference number: 3 (lower is better) Translates to: NCLHLKTLKSYY*SVDKLYNPHTG Trigger: TCCGGTGTGTGGATTATACAATTTATCCACTGAGCAGTAATAGGATTTTAGGGTTTTCAGGTGTAGGCAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGTTTCAAGAGCCAGAGGACCAAGACATTTGCTATTAGATTATATAAACAATAAACGCTTGGTTTATTaGCAGACTTCTGTTCCTACT | + |
|
Preference number: 3 (lower is better) Translates to: PVSRARGPRHLLLDYINNKRLVY*QTSVPT Trigger: AGTAGGAACAGAAGTCTGCAAATAAACCAAGCGTTT...ATTGTTTATATAATCTAATAGCAAATGTCTTGGTCCTCTGGCTCTTGAAACTGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGTTTCAAGAGCCAGAGGACCAAGACATTTGCTATTAGATTATATAAACAATCCTATTCAAAAACGCTaGGTTTATTTGCAGACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PVSRARGPRHLLLDYINNPIQKR*VYLQTS Trigger: AGAAGTCTGCAAATAAACCAAGCGTTTTTGAATAGG...ATTGTTTATATAATCTAATAGCAAATGTCTTGGTCCTCTGGCTCTTGAAACTGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR-3UTR CAA 90 bp | CCACACACCGGAATATTAGTCAACAATACAAAAGAACAAAGTACTGACATAAGTAAAGGTCATTCTCAATaGTCTTATACTAAAGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: PHTGILVNNTKEQSTDISKGHSQ*SYTKAS Trigger: GCTGGCTTTAGTATAAGACAATTGAGAATGACCTTT...ACTTATGTCAGTACTTTGTTCTTTTGTATTGTTGACTAATATTCCGGTGTGTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR GCA 72 bp | ATAAAGTTATATAGAGTTATGAGATACCATATGGCCTaGAGTACCAAAAATATTTACTGCCTGGCCCATATG | + |
|
Preference number: 3 (lower is better) Translates to: IKLYRVMRYHMA*STKNIYCLAHM Trigger: CATATGGGCCAGGCAGTAAATATTTTTGGTACTGCAGGCCATATGGTATCTCATAACTCTATATAACTTTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR TCA 72 bp | GGAAAGTATATGAAGTTCATATCTAGTGTCCATGAGTaGCATCTATTGAAATATAGGCAGTCATTTGTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: GKYMKFISSVHE*HLLKYRQSFVD Trigger: GTCTACAAATGACTGCCTATATTTCAATAGATGTCACTCATGGACACTAGATATGAACTTCATATACTTTCC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| CDS-3UTR TCA 90 bp | CTGTTGGGGCTGAGGCAGCAGAATCACTTCCCCTATAGTGCCCTCTTGTGGCAGCAGCAGACTGTGCTTTaGCAGTGCCCGCGCCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LLGLRQQNHFPYSALLWQQQTVL*QCPRQR Trigger: ACGCTGGCGCGGGCACTGTCAAAGCACAGTCTGCTG...CTGCCACAAGAGGGCACTATAGGGGAAGTGATTCTGCTGCCTCAGCCCCAACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025570.8 ENSMUST00000235243.2 ENSMUST00000237827.2 |
||
| CDS-3UTR TCA 90 bp | CACCTTGTCTCTCCACTGAACTGGCTTGTCCTGCAGGAAGCAGCCCAGCACTTTCAGCAGACTGTGCTTTaGCAGTGCCCGCGCCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: HLVSPLNWLVLQEAAQHFQQTVL*QCPRQR Trigger: ACGCTGGCGCGGGCACTGTCAAAGCACAGTCTGCTG...AAAGTGCTGGGCTGCTTCCTGCAGGACAAGCCAGTTCAGTGGAGAGACAAGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTGTCCTGCAGGAAGCAGCCCAGCACTTTTCACCCGGTTCCCAGCCTAGTCTCATCAGTTCTCTCCTaGCACGGAGGCAAAGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: GLSCRKQPSTFHPVPSLVSSVLS*HGGKGI Trigger: AATCCCTTTGCCTCCGTGGCAGGAGAGAACTGATGA...GACTAGGCTGGGAACCGGGTGAAAAGTGCTGGGCTGCTTCCTGCAGGACAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| CDS-3UTR TCA 90 bp | ATAGACGATAGGGTCAGCTCTTCCTTCAGCAGCAGTGTCTTTTGTACTGTTGGGCAGCAGACTGTGCTTTaGCAGTGCCCGCGCCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: IDDRVSSSFSSSVFCTVGQQTVL*QCPRQR Trigger: ACGCTGGCGCGGGCACTGTCAAAGCACAGTCTGCTG...CCCAACAGTACAAAAGACACTGCTGCTGAAGGAAGAGCTGACCCTATCGTCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025570.8 ENSMUST00000235243.2 ENSMUST00000237827.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGAGAGATTCAAGAGTCTAAGGAGAAGCAGGAGGCCAAGGTCAGTGCCAGAGAGATACTCCAGATCTaGGGCACGCAGTCTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGEIQESKEKQEAKVSAREILQI*GTQSLL Trigger: GAGCAGAGACTGCGTGCCCCAGATCTGGAGTATCTC...TCTGGCACTGACCTTGGCCTCCTGCTTCTCCTTAGACTCTTGAATCTCTCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025570.8 ENSMUST00000235222.2 |
||
| 3UTR CAA 72 bp | TTCCTGCTTTGGTGCCTCATTCAGCTTGCTGTGCCTTaGATGGCTCAGTTCAGGGGCTTGGACCGACATTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLLWCLIQLAVP*MAQFRGLDRHS Trigger: GGAATGTCGGTCCAAGCCCCTGAACTGAGCCATCAAAGGCACAGCAAGCTGAATGAGGCACCAAAGCAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025570.8 ENSMUST00000235243.2 ENSMUST00000235853.2 ENSMUST00000237827.2 |
||
| CDS-3UTR GCA 90 bp | CAGCAGAATCACTTCCCCTATAGTGCCCTCTTGTGGCAGACCTGCAGCACAGCATTCTGGGGCTGGTTTTaGTTCTGTGGCCCAGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QQNHFPYSALLWQTCSTAFWGWF*FCGPVV Trigger: TACTACTGGGCCACAGAAGCAAAACCAGCCCCAGAA...TGCTGTGCTGCAGGTCTGCCACAAGAGGGCACTATAGGGGAAGTGATTCTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025570.8 |
||
| CDS-3UTR CCA 90 bp | GAGATTCAAGAGTCTAAGGAGAAGCAGGAGGCCAAGGTCAGTGCCAGAAGCAGTGAGATACTCCAGATCTaGGGCACGCAGTCTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EIQESKEKQEAKVSARSSEILQI*GTQSLL Trigger: GAGCAGAGACTGCGTGCCCCAGATCTGGAGTATCTC...ACTGCTTCTGGCACTGACCTTGGCCTCCTGCTTCTCCTTAGACTCTTGAATCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025570.8 ENSMUST00000235222.2 |
||
| 3UTR CAA 72 bp | CAGCTTGCTGTGCCTTTGATGGCTCAGTTCAGGGGCTaGGACCGACATTCCTTAGCAAAGGACTTATCACGC | + |
|
Preference number: 4 (lower is better) Translates to: QLAVPLMAQFRG*DRHSLAKDLSR Trigger: GCGTGATAAGTCCTTTGCTAAGGAATGTCGGTCCAAGCCCCTGAACTGAGCCATCAAAGGCACAGCAAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025570.8 ENSMUST00000235243.2 ENSMUST00000235853.2 ENSMUST00000237827.2 |
||
| 3UTR CAA 72 bp | TCCCAGCCTAGTCTTCACTCTTCCTTCCCTTTGATCTaGGGAGCTTCCCGTGCTTTGCTGCTACATTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SQPSLHSSFPLI*GASRALLLHSL Trigger: GAGGGAATGTAGCAGCAAAGCACGGGAAGCTCCCAAGATCAAAGGGAAGGAAGAGTGAAGACTAGGCTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| CDS-3UTR TCA 90 bp | TTCCTGGGAGAGATTCAAGAGTCTAAGGAGAAGCAGGAGGCCAAGGTCAGTGCCCAGCAGACTGTGCTTTaGCAGTGCTTTGTCGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLGEIQESKEKQEAKVSAQQTVL*QCFVGS Trigger: AGAACCGACAAAGCACTGTCAAAGCACAGTCTGCTG...GGCACTGACCTTGGCCTCCTGCTTCTCCTTAGACTCTTGAATCTCTCCCAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235222.2 |
||
| CDS-3UTR GCA 90 bp | GGAGAGATTCAAGAGTCTAAGGAGAAGCAGGAGGCCAAGGTCAGTGCCAGAAGCTTCTGGGGCTGGTTTTaGTTCTGTGGCCCAGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GEIQESKEKQEAKVSARSFWGWF*FCGPVV Trigger: TACTACTGGGCCACAGAAGCAAAACCAGCCCCAGAA...GCTTCTGGCACTGACCTTGGCCTCCTGCTTCTCCTTAGACTCTTGAATCTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025570.8 ENSMUST00000235222.2 |
||
| CDS-3UTR GCA 90 bp | GGAGAGATTCAAGAGTCTAAGGAGAAGCAGGAGGCCAAGGTCAGTGCCAGAAGCGGAGACAGCAGACTGTaGTTTGACAGTGCTTTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GEIQESKEKQEAKVSARSGDSRL*FDSALS Trigger: CGACAAAGCACTGTCAAAGCACAGTCTGCTGTCTCC...GCTTCTGGCACTGACCTTGGCCTCCTGCTTCTCCTTAGACTCTTGAATCTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235222.2 |
||
| CDS-3UTR TCA 90 bp | GATGAAGATGTTGACTTAGTAAGCCCACAATATTCCTGCTTTGGTGCCTCATTCCAGCAGACTGTGCTTTaGCAGTGCCCGCGCCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: DEDVDLVSPQYSCFGASFQQTVL*QCPRQR Trigger: ACGCTGGCGCGGGCACTGTCAAAGCACAGTCTGCTG...GAATGAGGCACCAAAGCAGGAATATTGTGGGCTTACTAAGTCAACATCTTCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025570.8 ENSMUST00000235243.2 ENSMUST00000237827.2 |
||
| CDS-3UTR GCA 90 bp | GAGTCTAAGGAGAAGCAGGAGGCCAAGGTCAGTGCCAGAAGCAGTTTCTATCCATCATCAGTTCTCTCCTaGCACGGAGGCAAAGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: ESKEKQEAKVSARSSFYPSSVLS*HGGKGI Trigger: AATCCCTTTGCCTCCGTGGCAGGAGAGAACTGATGA...TGGATAGAAACTGCTTCTGGCACTGACCTTGGCCTCCTGCTTCTCCTTAGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025570.8 ENSMUST00000235222.2 ENSMUST00000237827.2 |
||
| CDS-3UTR GCA 90 bp | GAGATTCAAGAGTCTAAGGAGAAGCAGGAGGCCAAGGTCAGTGCCAGAAGCAGTTCATCAGTTCTCTCCTaGCACGGAGGCAAAGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: EIQESKEKQEAKVSARSSSSVLS*HGGKGI Trigger: AATCCCTTTGCCTCCGTGGCAGGAGAGAACTGATGA...ACTGCTTCTGGCACTGACCTTGGCCTCCTGCTTCTCCTTAGACTCTTGAATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025570.8 ENSMUST00000235222.2 ENSMUST00000237827.2 |
||
| CDS-3UTR CCA 90 bp | CTGTTGGGGCTGAGGCAGCAGAATCACTTCCCCTATAGTGCCCTCTTGTGGCAGTTTTTGAGAGTCTGTTaGGCTGTCACCTCTGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLGLRQQNHFPYSALLWQFLRVC*AVTSVE Trigger: TTCTACAGAGGTGACAGCCCAACAGACTCTCAAAAA...CTGCCACAAGAGGGCACTATAGGGGAAGTGATTCTGCTGCCTCAGCCCCAACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025570.8 ENSMUST00000237827.2 |
||
| 3UTR CAA 72 bp | TCTTCCTTCCCTTTGATCTTGGGAGCTTCCCGTGCTTaGCTGCTACATTCCCTCTCACCTAAGTTAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSFPLILGASRA*LLHSLSPKLAC Trigger: GCAGGCTAACTTAGGTGAGAGGGAATGTAGCAGCAAAGCACGGGAAGCTCCCAAGATCAAAGGGAAGGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| CDS-3UTR TCA 90 bp | AAGCAGGAGGCCAAGGTCAGTGCCAGAAGCAGTTTCTATCCATATACTGACCACGTAGAAGCGTCTGAATaGTGTCACACTAGGCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KQEAKVSARSSFYPYTDHVEASE*CHTRQG Trigger: CCCTTGCCTAGTGTGACATCATTCAGACGCTTCTAC...GTGGTCAGTATATGGATAGAAACTGCTTCTGGCACTGACCTTGGCCTCCTGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025570.8 ENSMUST00000235222.2 ENSMUST00000235243.2 ENSMUST00000237827.2 |
||
| CDS-3UTR CCA 90 bp | GGGACCACTGTGGAAGAAGGGACAGACCAGTTTCAAGAGCCAGAGGACCAAGACTTTTTGAGAGTCTGTTaGGCTGTCACCTCTGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GTTVEEGTDQFQEPEDQDFLRVC*AVTSVE Trigger: TTCTACAGAGGTGACAGCCCAACAGACTCTCAAAAA...GTCTTGGTCCTCTGGCTCTTGAAACTGGTCTGTCCCTTCTTCCACAGTGGTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| CDS-3UTR CCA 90 bp | GCTTTGGTGCCTCATTCAGCTTGCTGTGCCTTTGATGGCTCAGTTCAGGGGCTTCTGGTTTTGCTTCTGTaGCCCAGTAGTAAATATCCC | + |
|
Preference number: 4 (lower is better) Translates to: ALVPHSACCAFDGSVQGLLVLLL*PSSKYP Trigger: GGGATATTTACTACTGGGCCACAGAAGCAAAACCAG...AAGCCCCTGAACTGAGCCATCAAAGGCACAGCAAGCTGAATGAGGCACCAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025570.8 |
||
| 3UTR CAA 72 bp | CTGCCACGGAGGCAAAGGGATTTCAATCATGTCTTTTaGAGAGTCTGTTGGGCTGTCACCTCTGTAGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LPRRQRDFNHVF*RVCWAVTSVEA Trigger: CGCTTCTACAGAGGTGACAGCCCAACAGACTCTCAAAAAGACATGATTGAAATCCCTTTGCCTCCGTGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235853.2 |
||
| CDS-3UTR TCA 90 bp | GCTTTGGTGCCTCATTCAGCTTGCTGTGCCTTTGATGGCTCAGTTCAGGGGCTTTCAATCATGTCTTTTTaGGAGTCTGTTGGGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALVPHSACCAFDGSVQGLSIMSF*ESVGLS Trigger: TGACAGCCCAACAGACTCTCAAAAAGACATGATTGA...AAGCCCCTGAACTGAGCCATCAAAGGCACAGCAAGCTGAATGAGGCACCAAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025570.8 ENSMUST00000237827.2 |
||
| CDS-3UTR GCA 90 bp | TACATGTCTTTCCTGGGAGAGATTCAAGAGTCTAAGGAGAAGCAGGAGGCCAAGTCATCAGTTCTCTCCTaGCACGGAGGCAAAGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: YMSFLGEIQESKEKQEAKSSVLS*HGGKGI Trigger: AATCCCTTTGCCTCCGTGGCAGGAGAGAACTGATGA...CTTGGCCTCCTGCTTCTCCTTAGACTCTTGAATCTCTCCCAGGAAAGACATGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025570.8 ENSMUST00000235222.2 ENSMUST00000237827.2 |
||
| CDS-3UTR TCA 90 bp | TTCAAGAGTCTAAGGAGAAGCAGGAGGCCAAGGTCAGTGCCAGAAGCAGTTTCTTCAATCATGTCTTTTTaGGAGTCTGTTGGGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FKSLRRSRRPRSVPEAVSSIMSF*ESVGLS Trigger: TGACAGCCCAACAGACTCTCAAAAAGACATGATTGA...AGAAACTGCTTCTGGCACTGACCTTGGCCTCCTGCTTCTCCTTAGACTCTTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025570.8 ENSMUST00000235222.2 ENSMUST00000237827.2 |
||
| CDS-3UTR CCA 90 bp | CAGGAGGCCAAGGTCAGTGCCAGAAGCAGTTTCTATCCATATACTGACCACCATTTTTTGAGAGTCTGTTaGGCTGTCACCTCTGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QEAKVSARSSFYPYTDHHFLRVC*AVTSVE Trigger: TTCTACAGAGGTGACAGCCCAACAGACTCTCAAAAA...ATGGTGGTCAGTATATGGATAGAAACTGCTTCTGGCACTGACCTTGGCCTCCTG 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000025570.8 ENSMUST00000235222.2 ENSMUST00000237827.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTTTCCTGGGAGAGATTCAAGAGTCTAAGGAGAAGCAGGAGGCCAAGGTCATTTTTGAGAGTCTGTTaGGCTGTCACCTCTGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CLSWERFKSLRRSRRPRSFLRVC*AVTSVE Trigger: TTCTACAGAGGTGACAGCCCAACAGACTCTCAAAAA...TGACCTTGGCCTCCTGCTTCTCCTTAGACTCTTGAATCTCTCCCAGGAAAGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025570.8 ENSMUST00000235222.2 ENSMUST00000237827.2 |
||
| CDS-3UTR CCA 90 bp | AGTCTAAGGAGAAGCAGGAGGCCAAGGTCAGTGCCAGAAGCAGTTTCTATCCATGTAAGCGGGCTCTTTTaGTTTCTATGGATTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLRRSRRPRSVPEAVSIHVSGLF*FLWIHQ Trigger: CTGATGAATCCATAGAAACCAAAAGAGCCCGCTTAC...ATGGATAGAAACTGCTTCTGGCACTGACCTTGGCCTCCTGCTTCTCCTTAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025570.8 ENSMUST00000235222.2 ENSMUST00000237827.2 |
||
| CDS-3UTR CCA 90 bp | TCTAAGGAGAAGCAGGAGGCCAAGGTCAGTGCCAGAAGCAGTTTCTATCCATATCTGGTTTTGCTTCTGTaGCCCAGTAGTAAATATCCC | + |
|
Preference number: 4 (lower is better) Translates to: SKEKQEAKVSARSSFYPYLVLLL*PSSKYP Trigger: GGGATATTTACTACTGGGCCACAGAAGCAAAACCAG...ATATGGATAGAAACTGCTTCTGGCACTGACCTTGGCCTCCTGCTTCTCCTTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025570.8 ENSMUST00000235222.2 |
||
| CDS-3UTR CCA 90 bp | GCACGCAGTCTCTGCTCCTTGTTTTTGTTTTTGGCGAATTCTCTCAGCAATTCCCTTCTGGTGTGTCTGTaGCCCAGTAGTAAATATCCC | + |
|
Preference number: 4 (lower is better) Translates to: ARSLCSLFLFLANSLSNSLLVCL*PSSKYP Trigger: GGGATATTTACTACTGGGCCACAGACACACCAGAAG...GGAATTGCTGAGAGAATTCGCCAAAAACAAAAACAAGGAGCAGAGACTGCGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000237827.2 |
||
| 3UTR CAA 72 bp | CTTGCCTTCAATTGTCCAGTGACGGTTGCTACCGTGTaGTCTAGCAGAACGTTCATGAGCTTTGGATGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LAFNCPVTVATV*SSRTFMSFGCR Trigger: TCTACATCCAAAGCTCATGAACGTTCTGCTAGACAACACGGTAGCAACCGTCACTGGACAATTGAAGGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025570.8 |
||
| CDS-3UTR TCA 90 bp | TCTAAGGAGAAGCAGGAGGCCAAGGTCAGTGCCAGAAGCAGTTTCTATCCATATTCAATCATGTCTTTTTaGGAGTCTGTTGGGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SKEKQEAKVSARSSFYPYSIMSF*ESVGLS Trigger: TGACAGCCCAACAGACTCTCAAAAAGACATGATTGA...ATATGGATAGAAACTGCTTCTGGCACTGACCTTGGCCTCCTGCTTCTCCTTAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025570.8 ENSMUST00000235222.2 ENSMUST00000237827.2 |
||
| CDS-3UTR GCA 90 bp | TTTGATGAAGATGTTGACTTAGTAAGCCCACAATATTCCTGCTTTGGTGCCTCAGCATCCCCCTCTTTCTaGTCTCATAGAGTAAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: FDEDVDLVSPQYSCFGASASPSF*SHRVSG Trigger: CCCGCTTACTCTATGAGAGCAGAAAGAGGGGGATGC...TGAGGCACCAAAGCAGGAATATTGTGGGCTTACTAAGTCAACATCTTCATCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025570.8 ENSMUST00000237827.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGAGAGATTCAAGAGTCTAAGGAGAAGCAGGAGGCCAAGGTCAGTGCCAGAATTTTCAAATATTTCTaGGGCTGGTTTTGCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LGEIQESKEKQEAKVSARIFKYF*GWFCFC Trigger: ACAGAAGCAAAACCAGCCCCAGAAATATTTGAAAAT...TCTGGCACTGACCTTGGCCTCCTGCTTCTCCTTAGACTCTTGAATCTCTCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025570.8 ENSMUST00000235222.2 |
||
| CDS-3UTR CCA 90 bp | GGAGAGATTCAAGAGTCTAAGGAGAAGCAGGAGGCCAAGGTCAGTGCCAGAAGCATTTTCAAATATTTCTaGGGCTGGTTTTGCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GEIQESKEKQEAKVSARSIFKYF*GWFCFC Trigger: ACAGAAGCAAAACCAGCCCCAGAAATATTTGAAAAT...GCTTCTGGCACTGACCTTGGCCTCCTGCTTCTCCTTAGACTCTTGAATCTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025570.8 ENSMUST00000235222.2 |
||
| CDS-3UTR CCA 90 bp | TTGGTGCCTCATTCAGCTTGCTGTGCCTTTGATGGCTCAGTTCAGGGGCTTGGACCTTGTTTTTGTTTTTaGCGAATTCTCTCAGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: LVPHSACCAFDGSVQGLGPCFCF*RILSAI Trigger: AATTGCTGAGAGAATTCGCCAAAAACAAAAACAAGG...TCCAAGCCCCTGAACTGAGCCATCAAAGGCACAGCAAGCTGAATGAGGCACCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025570.8 |
||
| 3UTR CAA 72 bp | TCGTTGGTGTTTCACCTGCATCTGTGTCAGATCCTCTaGAAACTAGAGTTACAGACAGTTGTGAGCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLVFHLHLCQIL*KLELQTVVSCF Trigger: AAAGCAGCTCACAACTGTCTGTAACTCTAGTTTCAAGAGGATCTGACACAGATGCAGGTGAAACACCAACGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025570.8 ENSMUST00000235853.2 |
||
| CDS-3UTR CCA 90 bp | AAGCAGGAGGCCAAGGTCAGTGCCAGAAGCAGTTTCTATCCATATACTGACCACCCTTGTTTTTGTTTTTaGCGAATTCTCTCAGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: KQEAKVSARSSFYPYTDHPCFCF*RILSAI Trigger: AATTGCTGAGAGAATTCGCCAAAAACAAAAACAAGG...GTGGTCAGTATATGGATAGAAACTGCTTCTGGCACTGACCTTGGCCTCCTGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025570.8 ENSMUST00000235222.2 |
||
| CDS-3UTR TCA 90 bp | TCACAGAAAACTCATGATGTTGGAGAGCATTACCCTGAAAAAGCTAATCTTCACTCAATCATGTCTTTTTaGGAGTCTGTTGGGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SQKTHDVGEHYPEKANLHSIMSF*ESVGLS Trigger: TGACAGCCCAACAGACTCTCAAAAAGACATGATTGA...GTGAAGATTAGCTTTTTCAGGGTAATGCTCTCCAACATCATGAGTTTTCTGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| CDS-3UTR CCA 90 bp | CCACACACCGGAATATTAGTCAACAATACAAAAGAACAAAGTACTGACATAAGTCATATGGCATACCTGTaGCCCAGTAGTAAATATCCC | + |
|
Preference number: 4 (lower is better) Translates to: PHTGILVNNTKEQSTDISHMAYL*PSSKYP Trigger: GGGATATTTACTACTGGGCCACAGGTATGCCATATG...ACTTATGTCAGTACTTTGTTCTTTTGTATTGTTGACTAATATTCCGGTGTGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR CAA 72 bp | GACAGACCAGTTTCAAGAGCCAGAGGACCAAGACATTaGCTATTAGATTATATAAACAATGTCAGATGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: DRPVSRARGPRH*LLDYINNVRCY Trigger: GTAGCATCTGACATTGTTTATATAATCTAATAGCAAATGTCTTGGTCCTCTGGCTCTTGAAACTGGTCTGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| CDS-3UTR GCA 90 bp | CCAGTTTCAAGAGCCAGAGGACCAAGACATTTGCTATTAGATTATATAAACAATCGTATTATCCCAAGATaGAGCTCAGCATATGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: PVSRARGPRHLLLDYINNRIIPR*SSAYGI Trigger: TATGCCATATGCTGAGCTGCATCTTGGGATAATACG...ATTGTTTATATAATCTAATAGCAAATGTCTTGGTCCTCTGGCTCTTGAAACTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| 3UTR CAA 72 bp | CCTTCATACCTTGTCTCTAGAAATCACTGGTACATATaGTCCTTGTTGTTTTGTCTTTCCCAAAATATCATA | + |
|
Preference number: 4 (lower is better) Translates to: PSYLVSRNHWYI*SLLFCLSQNII Trigger: TATGATATTTTGGGAAAGACAAAACAACAAGGACAATATGTACCAGTGATTTCTAGAGACAAGGTATGAAGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| CDS GCA 90 bp | AAGCGTCTGAATGATGTCACACTAGGCAAGGGAGACAGCAGACTGTaGTTTGACAGTGCCCGCGCCAGCGTCGGGATCAAGGTGACCACC | + |
|
Preference number: 5 (lower is better) Translates to: KRLNDVTLGKGDSRL*FDSARASVGIKVTT Trigger: GGTGGTCACCTTGATCCCGACGCTGGCGCGGGCACTGTCAAAGCACAGTCTGCTGTCTCCCTTGCCTAGTGTGACATCATTCAGACGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025570.8 ENSMUST00000235243.2 ENSMUST00000236455.2 ENSMUST00000237827.2 |
||
| CDS-3UTR CAA 90 bp | GGCTTGTCCTGCAGGAAGCAGCCCAGCACTTTTCACCCGGTTCCCAGCCTAGTCAGTAAGCGGGCTCTTTaGGTTTCTATGGATTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: GLSCRKQPSTFHPVPSLVSKRAL*VSMDSS Trigger: TGATGAATCCATAGAAACCAAAAGAGCCCGCTTACT...GACTAGGCTGGGAACCGGGTGAAAAGTGCTGGGCTGCTTCCTGCAGGACAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| CDS GCA 90 bp | AAGCGTCTGAATGATGTCACACTAGGCAAGGGAGACAGCAGACTGTaGTTTGACAGTGCTTTGTCGGTTCTCCGGGCTCGAGAGCGTATT | + |
|
Preference number: 5 (lower is better) Translates to: KRLNDVTLGKGDSRL*FDSALSVLRARERI Trigger: AATACGCTCTCGAGCCCGGAGAACCGACAAAGCACTGTCAAAGCACAGTCTGCTGTCTCCCTTGCCTAGTGTGACATCATTCAGACGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235222.2 |
||
| CDS-3UTR CAA 90 bp | CTTCAACACCTTGTCTCTCCACTGAACTGGCTTGTCCTGCAGGAAGCAGCCCAGCTTTTTGAGAGTCTGTaGGGCTGTCACCTCTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: LQHLVSPLNWLVLQEAAQLFESL*GCHLCR Trigger: TCTACAGAGGTGACAGCCCAACAGACTCTCAAAAAG...CTGGGCTGCTTCCTGCAGGACAAGCCAGTTCAGTGGAGAGACAAGGTGTTGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236455.2 |
||
| CDS-3UTR CAA 90 bp | TTACCCACCCAGGCTTCTCAGTTCTGGCCTGCTTTCTCTAGCCAACACTCACATTTTCTGGGGCTGGTTTaGCTTCTGTGGCCCAGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: LPTQASQFWPAFSSQHSHFLGLV*LLWPSS Trigger: ACTACTGGGCCACAGAAGCAAAACCAGCCCCAGAAA...ATGTGAGTGTTGGCTAGAGAAAGCAGGCCAGAACTGAGAAGCCTGGGTGGGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025570.8 |
||
| CDS-3UTR CAA 90 bp | AGCAGGAGGCCAAGGTCAGTGCCAGAAGCAGTTTCTATCCATATACTGACCACCTTTCTGGGGCTGGTTTaGCTTCTGTGGCCCAGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: SRRPRSVPEAVSIHILTTFLGLV*LLWPSS Trigger: ACTACTGGGCCACAGAAGCAAAACCAGCCCCAGAAA...GGTGGTCAGTATATGGATAGAAACTGCTTCTGGCACTGACCTTGGCCTCCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025570.8 ENSMUST00000235222.2 |
||
| CDS-3UTR CAA 90 bp | GTCAGTGCCAGAAGCAGTTTCTATCCATATACTGACCACCATGACAGGCAGTGGTGCTTTGACAGTGCTTaGTCGGTTCTCCGGGCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: VSARSSFYPYTDHHDRQWCFDSA*SVLRAR Trigger: TCGAGCCCGGAGAACCGACAAAGCACTGTCAAAGCA...CCACTGCCTGTCATGGTGGTCAGTATATGGATAGAAACTGCTTCTGGCACTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235222.2 |
||
| CDS-3UTR CAA 90 bp | GGAGAGATTCAAGAGTCTAAGGAGAAGCAGGAGGCCAAGGTCAGTGCCAGAAGCCTTTTTGAGAGTCTGTaGGGCTGTCACCTCTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: GEIQESKEKQEAKVSARSLFESL*GCHLCR Trigger: TCTACAGAGGTGACAGCCCAACAGACTCTCAAAAAG...GCTTCTGGCACTGACCTTGGCCTCCTGCTTCTCCTTAGACTCTTGAATCTCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025570.8 ENSMUST00000235222.2 ENSMUST00000237827.2 |
||
| CDS-3UTR CAA 90 bp | AGCCCCAAATCCTGGCTTTTTGATCATGGATGCATTGCTGACTCCTTCCAAGGCCTTTTTGAGAGTCTGTaGGGCTGTCACCTCTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: SPKSWLFDHGCIADSFQGLFESL*GCHLCR Trigger: TCTACAGAGGTGACAGCCCAACAGACTCTCAAAAAG...GCCTTGGAAGGAGTCAGCAATGCATCCATGATCAAAAAGCCAGGATTTGGGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025570.8 |
||
| CDS-3UTR CAA 90 bp | CAGGAGGCCAAGGTCAGTGCCAGAAGCAGTTTCTATCCATATACTGACCACCATCTTTTTGAGAGTCTGTaGGGCTGTCACCTCTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: QEAKVSARSSFYPYTDHHLFESL*GCHLCR Trigger: TCTACAGAGGTGACAGCCCAACAGACTCTCAAAAAG...ATGGTGGTCAGTATATGGATAGAAACTGCTTCTGGCACTGACCTTGGCCTCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025570.8 ENSMUST00000235222.2 ENSMUST00000237827.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGGAGGCCAAGGTCAGTGCCAGAAGCAGTTTCTATCCATATACTGACCACCCGCAGTCTCTGCTCCTaGTTTTTGTTTTTGGCGAAT | + |
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Preference number: 5 (lower is better) Translates to: SRRPRSVPEAVSIHILTTRSLCS*FLFLAN Trigger: ATTCGCCAAAAACAAAAACAAGGAGCAGAGACTGCG...GGTGGTCAGTATATGGATAGAAACTGCTTCTGGCACTGACCTTGGCCTCCTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025570.8 ENSMUST00000235222.2 |
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| CDS-3UTR CAA 90 bp | AGCAGGAGGCCAAGGTCAGTGCCAGAAGCAGTTTCTATCCATATACTGACCACCAGTAAGCGGGCTCTTTaGGTTTCTATGGATTCATCA | + |
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Preference number: 5 (lower is better) Translates to: SRRPRSVPEAVSIHILTTSKRAL*VSMDSS Trigger: TGATGAATCCATAGAAACCAAAAGAGCCCGCTTACT...GGTGGTCAGTATATGGATAGAAACTGCTTCTGGCACTGACCTTGGCCTCCTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025570.8 ENSMUST00000235222.2 ENSMUST00000237827.2 |
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| CDS-3UTR CAA 90 bp | GTCAGTGCCAGAAGCAGTTTCTATCCATATACTGACCACCATGACAGGCAGTGGAGTAAGCGGGCTCTTTaGGTTTCTATGGATTCATCA | + |
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Preference number: 5 (lower is better) Translates to: VSARSSFYPYTDHHDRQWSKRAL*VSMDSS Trigger: TGATGAATCCATAGAAACCAAAAGAGCCCGCTTACT...CCACTGCCTGTCATGGTGGTCAGTATATGGATAGAAACTGCTTCTGGCACTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025570.8 ENSMUST00000235222.2 ENSMUST00000237827.2 |
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| CDS-3UTR CAA 90 bp | TCTAAGGAGAAGCAGGAGGCCAAGGTCAGTGCCAGAAGCAGTTTCTATCCATATCGCAGTCTCTGCTCCTaGTTTTTGTTTTTGGCGAAT | + |
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Preference number: 5 (lower is better) Translates to: SKEKQEAKVSARSSFYPYRSLCS*FLFLAN Trigger: ATTCGCCAAAAACAAAAACAAGGAGCAGAGACTGCG...ATATGGATAGAAACTGCTTCTGGCACTGACCTTGGCCTCCTGCTTCTCCTTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025570.8 ENSMUST00000235222.2 |
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| CDS-3UTR CAA 90 bp | ATGTCTTTCCTGGGAGAGATTCAAGAGTCTAAGGAGAAGCAGGAGGCCAAGGTCTCCTTGTTTTTGTTTTaGGCGAATTCTCTCAGCAAT | + |
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Preference number: 5 (lower is better) Translates to: MSFLGEIQESKEKQEAKVSLFLF*ANSLSN Trigger: ATTGCTGAGAGAATTCGCCAAAAACAAAAACAAGGA...GACCTTGGCCTCCTGCTTCTCCTTAGACTCTTGAATCTCTCCCAGGAAAGACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025570.8 ENSMUST00000235222.2 |
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| CDS-3UTR CAA 90 bp | AGTCCAGATGCTTCTATATATAAACCCTGTCTGTTTAGCACCTCCATCCCCCTATTCAATCATGTCTTTTaGAGAGTCTGTTGGGCTGTC | + |
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Preference number: 5 (lower is better) Translates to: SPDASIYKPCLFSTSIPLFNHVF*RVCWAV Trigger: GACAGCCCAACAGACTCTCAAAAAGACATGATTGAA...TAGGGGGATGGAGGTGCTAAACAGACAGGGTTTATATATAGAAGCATCTGGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025570.8 |
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| CDS-3UTR CAA 90 bp | TACATGTCTTTCCTGGGAGAGATTCAAGAGTCTAAGGAGAAGCAGGAGGCCAAGTCCTTGTTTTTGTTTTaGGCGAATTCTCTCAGCAAT | + |
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Preference number: 5 (lower is better) Translates to: YMSFLGEIQESKEKQEAKSLFLF*ANSLSN Trigger: ATTGCTGAGAGAATTCGCCAAAAACAAAAACAAGGA...CTTGGCCTCCTGCTTCTCCTTAGACTCTTGAATCTCTCCCAGGAAAGACATGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025570.8 ENSMUST00000235222.2 |
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| CDS GCA 72 bp | AATGATGTCACACTAGGCAAGGGAGACAGCAGACTGTaGTTTGACAGTGCCCGCGCCAGCGTCGGGATCAAG | + |
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Preference number: 6 (lower is better) Translates to: NDVTLGKGDSRL*FDSARASVGIK Trigger: CTTGATCCCGACGCTGGCGCGGGCACTGTCAAAGCACAGTCTGCTGTCTCCCTTGCCTAGTGTGACATCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025570.8 ENSMUST00000235243.2 ENSMUST00000236455.2 ENSMUST00000237827.2 |
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| CDS CAA 72 bp | GGCAAGGGAGACAGCAGACTGTGCTTTGACAGTGCTTaGTCGGTTCTCCGGGCTCGAGAGCGTATTTCCGGA | + |
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Preference number: 6 (lower is better) Translates to: GKGDSRLCFDSA*SVLRARERISG Trigger: TCCGGAAATACGCTCTCGAGCCCGGAGAACCGACAAAGCACTGTCAAAGCACAGTCTGCTGTCTCCCTTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235222.2 |
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| CDS GCA 72 bp | AATGATGTCACACTAGGCAAGGGAGACAGCAGACTGTaGTTTGACAGTGCTTTGTCGGTTCTCCGGGCTCGA | + |
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Preference number: 6 (lower is better) Translates to: NDVTLGKGDSRL*FDSALSVLRAR Trigger: TCGAGCCCGGAGAACCGACAAAGCACTGTCAAAGCACAGTCTGCTGTCTCCCTTGCCTAGTGTGACATCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235222.2 |
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| CDS CCA 72 bp | TCACAACCATCTGCAATGGGATCCGACGCCCTCTTCTaGTGTGTCTGTGGCCCAGTAGTAAATATCCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: SQPSAMGSDALF*CVCGPVVNIPV Trigger: GACTGGGATATTTACTACTGGGCCACAGACACACCAGAAGAGGGCGTCGGATCCCATTGCAGATGGTTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237827.2 |
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