Pregenerated sensors for SDF4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029076Ensembl transcript IDs: ENSMUST00000050078.13, ENSMUST00000097734.11, ENSMUST00000105578.2, ENSMUST00000105579.8
Found 232 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTCCCAGTGTGGTAAGCACACAGAGGGGCCCAGCCCAGAGCTCCTaGCCCTCATGTGTGCAGCACCCTCACCTGAACCAACCATCCCAA | + |
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Preference number: 1 (lower is better) Translates to: FPSVVSTQRGPAQSS*PSCVQHPHLNQPSQ Trigger: TTGGGATGGTTGGTTCAGGTGAGGGTGCTGCACACATGAGGGCCAGGAGCTCTGGGCTGGGCCCCTCTGTGTGCTTACCACACTGGGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR TCA 90 bp | GCACCCGCACTTTCTCACAGGGTAGACAGTGACTCTGCGGGTTTCTaGGGAGTTTGGGGACGACTCCCATGGCCTCCAAGACCAACGAGG | + |
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Preference number: 1 (lower is better) Translates to: APALSHRVDSDSAGF*GVWGRLPWPPRPTR Trigger: CCTCGTTGGTCTTGGAGGCCATGGGAGTCGTCCCCAAACTCCTCAGAAACCCGCAGAGTCACTGTCTACCCTGTGAGAAAGTGCGGGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR GCA 90 bp | GCTTCTAAGGATGCTCTGCACCTTTCCTGGAGACATGGTCCTGGATaGCATCTCCAGGCCAAGGCACGAGCAGAGCAGGATAGGGATGGT | + |
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Preference number: 1 (lower is better) Translates to: ASKDALHLSWRHGPG*HLQAKARAEQDRDG Trigger: ACCATCCCTATCCTGCTCTGCTCGTGCCTTGGCCTGGAGATGGCATCCAGGACCATGTCTCCAGGAAAGGTGCAGAGCATCCTTAGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR TCA 90 bp | GCCCAGCCCAGAGCTCCTGGCCCTCATGTGTGCAGCACCCTCACCTaGACCAACCATCCCAAGCAGTTCTCAGAAACAGAATTTAACAAC | + |
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Preference number: 1 (lower is better) Translates to: AQPRAPGPHVCSTLT*TNHPKQFSETEFNN Trigger: GTTGTTAAATTCTGTTTCTGAGAACTGCTTGGGATGGTTGGTTCAGGTGAGGGTGCTGCACACATGAGGGCCAGGAGCTCTGGGCTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR TCA 90 bp | GGTACTGGAAAGATCACTAGCAGCAGCCGGCCTTACTGTATCCACTaGGCTGCTGCCCCTAAAAACTGCAGGGAAGATAGCAATCCTAGG | + |
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Preference number: 1 (lower is better) Translates to: GTGKITSSSRPYCIH*AAAPKNCREDSNPR Trigger: CCTAGGATTGCTATCTTCCCTGCAGTTTTTAGGGGCAGCAGCTCAGTGGATACAGTAAGGCCGGCTGCTGCTAGTGATCTTTCCAGTACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR GCA 90 bp | GGAATACATAGAAAAACCCAGAACGGGCCAAGTGGTCACAGAGACTaGCCTCCCCATGCTTCTGAGTACAGTGAAGGCTCTGGAGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: GIHRKTQNGPSGHRD*PPHASEYSEGSGEE Trigger: TTCCTCTCCAGAGCCTTCACTGTACTCAGAAGCATGGGGAGGGCAGTCTCTGTGACCACTTGGCCCGTTCTGGGTTTTTCTATGTATTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR GCA 90 bp | GTCAGTGAGCTCAACGCGGGCCTTCTTTTCTTACACTCAAACCACTaGACTGAAGGAGGAAATGAGTTAGCAGGGGGCAGTGCCTTTACT | + |
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Preference number: 1 (lower is better) Translates to: VSELNAGLLFLHSNH*TEGGNELAGGSAFT Trigger: AGTAAAGGCACTGCCCCCTGCTAACTCATTTCCTCCTTCAGTGCAGTGGTTTGAGTGTAAGAAAAGAAGGCCCGCGTTGAGCTCACTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR GCA 90 bp | CACTCATCCCTTCAGTTCAAGGGATCTAAAGCAACTCCCACAGGGTaGTGCCCCTTGAGTACCAGACAGGAAGTAATGAGAACCTCTGAA | + |
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Preference number: 1 (lower is better) Translates to: HSSLQFKGSKATPTG*CPLSTRQEVMRTSE Trigger: TTCAGAGGTTCTCATTACTTCCTGTCTGGTACTCAAGGGGCAGCACCCTGTGGGAGTTGCTTTAGATCCCTTGAACTGAAGGGATGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR TCA 90 bp | ACCACTCTGGGACCTGCTGAAACCTTCCTGTCCACATTACCATTCTaGGTTTTCAAGTCTCATCTTTGCCTAGGAATCAGCTCGGTGCCT | + |
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Preference number: 1 (lower is better) Translates to: TTLGPAETFLSTLPF*VFKSHLCLGISSVP Trigger: AGGCACCGAGCTGATTCCTAGGCAAAGATGAGACTTGAAAACTCAGAATGGTAATGTGGACAGGAAGGTTTCAGCAGGTCCCAGAGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR GCA 90 bp | TCATCCCTTCAGTTCAAGGGATCTAAAGCAACTCCCACAGGGTGCTaGCCCTTGAGTACCAGACAGGAAGTAATGAGAACCTCTGAAAGA | + |
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Preference number: 1 (lower is better) Translates to: SSLQFKGSKATPTGC*PLSTRQEVMRTSER Trigger: TCTTTCAGAGGTTCTCATTACTTCCTGTCTGGTACTCAAGGGGCAGCACCCTGTGGGAGTTGCTTTAGATCCCTTGAACTGAAGGGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR TCA 90 bp | GAAGTCAGAAGAGCTAGAGTTATAGGCAGTGGTGAACCACCATCATaGGTGCTGGAAACTGAACTTTGGTTCTCTGCAAGAACGCATGCT | + |
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Preference number: 1 (lower is better) Translates to: EVRRARVIGSGEPPS*VLETELWFSARTHA Trigger: AGCATGCGTTCTTGCAGAGAACCAAAGTTCAGTTTCCAGCACTCATGATGGTGGTTCACCACTGCCTATAACTCTAGCTCTTCTGACTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR TCA 90 bp | TTTATTCCCACATCACTGTTCATCACCAGAGTAAAATGGCCACAGTaGGACTACATCCCAAAGGAGTCACAGATGGATTGCTGTGAGGGC | + |
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Preference number: 1 (lower is better) Translates to: FIPTSLFITRVKWPQ*DYIPKESQMDCCEG Trigger: GCCCTCACAGCAATCCATCTGTGACTCCTTTGGGATGTAGTCTCACTGTGGCCATTTTACTCTGGTGATGAACAGTGATGTGGGAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097734.11 |
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| 3UTR TCA 90 bp | GGCAGCACCTCCAGGGCTGTGGGGCTGATCATTTCCAGAGAAATATaGTCTAACTTTATCGTAATCTTTCAGTTTTCAAGGAAACTGCAA | + |
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Preference number: 1 (lower is better) Translates to: GSTSRAVGLIISREI*SNFIVIFQFSRKLQ Trigger: TTGCAGTTTCCTTGAAAACTGAAAGATTACGATAAAGTTAGATCATATTTCTCTGGAAATGATCAGCCCCACAGCCCTGGAGGTGCTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR-3UTR CCA 90 bp | TGCAGCTCAGCTCATGACTGGTACAGAAGGGCTACTGCCTCAGACACATGCTGGCTTTCTTGGGGCCTATaGAAGCCTCCGGACTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: CSSAHDWYRRATASDTCWLSWGL*KPPDSG Trigger: CCCTGAGTCCGGAGGCTTCCATAGGCCCCAAGAAAG...CCAGCATGTGTCTGAGGCAGTAGCCCTTCTGTACCAGTCATGAGCTGAGCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 |
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| 3UTR-3UTR CCA 90 bp | CGACAGGTGTGTGTCAGTGAGCTCAACGCGGGCCTTCTTTTCTTACACTCAAACCCAGCCCAGAGCTCCTaGCCCTCATGTGTGCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: RQVCVSELNAGLLFLHSNPAQSS*PSCVQH Trigger: GTGCTGCACACATGAGGGCCAGGAGCTCTGGGCTGG...GTTTGAGTGTAAGAAAAGAAGGCCCGCGTTGAGCTCACTGACACACACCTGTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR-3UTR GCA 90 bp | GCTCAGACTCTGCTGCTGCTCCCACACTCAAGGCCCAACCTCATCCCACATAACACTGCCTCAGACACATaGTGGAGAGGACACATAGCC | + |
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Preference number: 2 (lower is better) Translates to: AQTLLLLPHSRPNLIPHNTASDT*WRGHIA Trigger: GGCTATGTGTCCTCTCCAGCATGTGTCTGAGGCAGT...GTTATGTGGGATGAGGTTGGGCCTTGAGTGTGGGAGCAGCAGCAGAGTCTGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR-3UTR CCA 90 bp | GCCATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACACAACAGAAGGAGGAGAGCCTCCTCGAAGCATaGGAAGGGTCAGACAGGACA | + |
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Preference number: 2 (lower is better) Translates to: AMPWQELSQSIWTQQKEESLLEA*EGSDRT Trigger: TGTCCTGTCTGACCCTTCCCATGCTTCGAGGAGGCT...CTCCTCCTTCTGTTGTGTCCATATGCTCTGGCTTAGCTCCTGCCATGGCATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCCTATGGAAGCCTCCGGACTCAGGGTAGATAGCATTTTAGACCCAATCTGGAGCCTCCTCGAAGCATaGGAAGGGTCAGACAGGACA | + |
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Preference number: 2 (lower is better) Translates to: GPMEASGLRVDSILDPIWSLLEA*EGSDRT Trigger: TGTCCTGTCTGACCCTTCCCATGCTTCGAGGAGGCT...CCAGATTGGGTCTAAAATGCTATCTACCCTGAGTCCGGAGGCTTCCATAGGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCTGCCTCCACCTCCCAAATGCTGCGACGACAGGTGTGTGTCAGTGAGCTCATCCCCAGTCCTCTCATaGAAACACCTAACCTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: FLPPPPKCCDDRCVSVSSSPVLS*KHLTWK Trigger: CTTCCAGGTTAGGTGTTTCCATGAGAGGACTGGGGA...TGAGCTCACTGACACACACCTGTCGTCGCAGCATTTGGGAGGTGGAGGCAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR-3UTR TCA 90 bp | GTCCGACCACTCTGGGACCTGCTGAAACCTTCCTGTCCACATTACCATTCTGAGATGCAGCTCAGCTCATaGCTGGTACAGAAGGGCTAC | + |
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Preference number: 2 (lower is better) Translates to: VRPLWDLLKPSCPHYHSEMQLSS*LVQKGY Trigger: GTAGCCCTTCTGTACCAGTCATGAGCTGAGCTGCAT...CTCAGAATGGTAATGTGGACAGGAAGGTTTCAGCAGGTCCCAGAGTGGTCGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR-3UTR CCA 90 bp | GCTCAGACTCTGCTGCTGCTCCCACACTCAAGGCCCAACCTCATCCCACATAACATTTTAGACCCAATCTaGACCCAGCCATCCACAGGT | + |
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Preference number: 2 (lower is better) Translates to: AQTLLLLPHSRPNLIPHNILDPI*TQPSTG Trigger: ACCTGTGGATGGCTGGGTCCAGATTGGGTCTAAAAT...GTTATGTGGGATGAGGTTGGGCCTTGAGTGTGGGAGCAGCAGCAGAGTCTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR-3UTR CCA 90 bp | TTCCTGCCTCCACCTCCCAAATGCTGCGACGACAGGTGTGTGTCAGTGAGCTCAATCCTCAGGGAATCCTaGGCAACATTCTCTAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: FLPPPPKCCDDRCVSVSSILRES*ATFSSP Trigger: AGGACTAGAGAATGTTGCCCAGGATTCCCTGAGGAT...TGAGCTCACTGACACACACCTGTCGTCGCAGCATTTGGGAGGTGGAGGCAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR-3UTR CCA 90 bp | TCTTTAATAAACCTGGGCCATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACAGCCTCCTCGAAGCATaGGAAGGGTCAGACAGGACA | + |
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Preference number: 2 (lower is better) Translates to: SLINLGHAMAGAKPEHMDSLLEA*EGSDRT Trigger: TGTCCTGTCTGACCCTTCCCATGCTTCGAGGAGGCT...GTCCATATGCTCTGGCTTAGCTCCTGCCATGGCATGGCCCAGGTTTATTAAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| 3UTR CAA 90 bp | CTTCAGTTCAAGGGATCTAAAGCAACTCCCACAGGGTGCTGCCCCTaGAGTACCAGACAGGAAGTAATGAGAACCTCTGAAAGACCAGGC | + |
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Preference number: 2 (lower is better) Translates to: LQFKGSKATPTGCCP*STRQEVMRTSERPG Trigger: GCCTGGTCTTTCAGAGGTTCTCATTACTTCCTGTCTGGTACTCAAGGGGCAGCACCCTGTGGGAGTTGCTTTAGATCCCTTGAACTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR CAA 90 bp | GCATATGGACACAACAGAAGGAGGAGGTTCTGGAACAGCACTTTCTaGGGGCCTATGGAAGCCTCCGGACTCAGGGTAGATAGCATTTTA | + |
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Preference number: 2 (lower is better) Translates to: AYGHNRRRRFWNSTF*GPMEASGLRVDSIL Trigger: TAAAATGCTATCTACCCTGAGTCCGGAGGCTTCCATAGGCCCCAAGAAAGTGCTGTTCCAGAACCTCCTCCTTCTGTTGTGTCCATATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCACATCACTGTTCATCACCAGAGTAAAATGGCCACAGTGAGACTACATCCCGGGCACCAGACTCCCTaGAGCTCTGAAAAGCATCTT | + |
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Preference number: 2 (lower is better) Translates to: SHITVHHQSKMATVRLHPGHQTP*SSEKHL Trigger: AAGATGCTTTTCAGAGCTTCAGGGAGTCTGGTGCCC...GGGATGTAGTCTCACTGTGGCCATTTTACTCTGGTGATGAACAGTGATGTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097734.11 |
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| 3UTR-3UTR GCA 90 bp | CGACAGGTGTGTGTCAGTGAGCTCAACGCGGGCCTTCTTTTCTTACACTCAAACTTCAAGTCTCATCTTTaGCTAGGAATCAGCTCGGTG | + |
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Preference number: 2 (lower is better) Translates to: RQVCVSELNAGLLFLHSNFKSHL*LGISSV Trigger: CACCGAGCTGATTCCTAGGCAAAGATGAGACTTGAA...GTTTGAGTGTAAGAAAAGAAGGCCCGCGTTGAGCTCACTGACACACACCTGTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR-3UTR CCA 90 bp | TCTTTAATAAACCTGGGCCATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACATTTTAGACCCAATCTaGACCCAGCCATCCACAGGT | + |
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Preference number: 2 (lower is better) Translates to: SLINLGHAMAGAKPEHMDILDPI*TQPSTG Trigger: ACCTGTGGATGGCTGGGTCCAGATTGGGTCTAAAAT...GTCCATATGCTCTGGCTTAGCTCCTGCCATGGCATGGCCCAGGTTTATTAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| 3UTR-3UTR GCA 90 bp | GAACTCTGCTGTCCTTGGCTGTCACACTTGGCCAAACAGTTTAGCATCTGCACAAGAATGACAATGTATTaGTGGGCAGTGGCAGTGCAT | + |
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Preference number: 2 (lower is better) Translates to: ELCCPWLSHLAKQFSICTRMTMY*WAVAVH Trigger: ATGCACTGCCACTGCCCAGCAATACATTGTCATTCT...TGTGCAGATGCTAAACTGTTTGGCCAAGTGTGACAGCCAAGGACAGCAGAGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR-3UTR GCA 90 bp | CATGAGTGCTGGAAACTGAACTTTGGTTCTCTGCAAGAACGCATGCTCTTACCAACTAATGAGCTGCCATaGTTTGCACCCCACACACCT | + |
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Preference number: 2 (lower is better) Translates to: HECWKLNFGSLQERMLLPTNELP*FAPHTP Trigger: AGGTGTGTGGGGTGCAAAGCATGGCAGCTCATTAGT...TGGTAAGAGCATGCGTTCTTGCAGAGAACCAAAGTTCAGTTTCCAGCACTCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR-3UTR CCA 90 bp | AGGGTTTATTCCCACATCACTGTTCATCACCAGAGTAAAATGGCCACAGTGAGACAAAGGAGTCACAGATaGATTGCTGTGAGGGCACCA | + |
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Preference number: 2 (lower is better) Translates to: RVYSHITVHHQSKMATVRQRSHR*IAVRAP Trigger: TGGTGCCCTCACAGCAATCCATCTGTGACTCCTTTG...TCTCACTGTGGCCATTTTACTCTGGTGATGAACAGTGATGTGGGAATAAACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097734.11 |
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| 3UTR-3UTR GCA 90 bp | AGTAGCTTCCTGTGGGAAAACTGGGTCACACAGGTATCTAGAGGCCTGGGATCGAGTTTTCAAGGAAACTaGAAGAGTTGCATTATTTCC | + |
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Preference number: 2 (lower is better) Translates to: SSFLWENWVTQVSRGLGSSFQGN*KSCIIS Trigger: GGAAATAATGCAACTCTTGCAGTTTCCTTGAAAACT...CGATCCCAGGCCTCTAGATACCTGTGTGACCCAGTTTTCCCACAGGAAGCTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR-3UTR GCA 90 bp | GCTAGAGCCACAGCTCTCTTCATGTTTTCTTTTAACAGTTTCACTAAGTTGCCCCAAATTCAAGAGAGCTaGCTGCCTCTGCTTCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: ARATALFMFSFNSFTKLPQIQES*LPLLPE Trigger: CTCAGGAAGCAGAGGCAGGCAGCTCTCTTGAATTTG...GGGCAACTTAGTGAAACTGTTAAAAGAAAACATGAAGAGAGCTGTGGCTCTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR-3UTR CCA 90 bp | CAGAATTTAACAACTGAAAAGAGATTTGGTCAAGCAAATGCAGCTCAGCTCATGGGAACAGCACTTTCTTaGGGCCTATGGAAGCCTCCG | + |
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Preference number: 2 (lower is better) Translates to: QNLTTEKRFGQANAAQLMGTALS*GLWKPP Trigger: CGGAGGCTTCCATAGGCCCCAAGAAAGTGCTGTTCC...CATGAGCTGAGCTGCATTTGCTTGACCAAATCTCTTTTCAGTTGTTAAATTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 |
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| 3UTR CAA 90 bp | AACCTTCCTGTCCACATTACCATTCTGAGTTTTCAAGTCTCATCTTaGCCTAGGAATCAGCTCGGTGCCTCCACTCTAATGACTAATGAG | + |
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Preference number: 2 (lower is better) Translates to: NLPVHITILSFQVSS*PRNQLGASTLMTNE Trigger: CTCATTAGTCATTAGAGTGGAGGCACCGAGCTGATTCCTAGGCAAAGATGAGACTTGAAAACTCAGAATGGTAATGTGGACAGGAAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR-3UTR CCA 90 bp | CATGAGTGCTGGAAACTGAACTTTGGTTCTCTGCAAGAACGCATGCTCTTACCATTCCTGTCTGGCCTTTaGGTCCTATTTTCACTTCTA | + |
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Preference number: 2 (lower is better) Translates to: HECWKLNFGSLQERMLLPFLSGL*VLFSLL Trigger: TAGAAGTGAAAATAGGACCCAAAGGCCAGACAGGAA...TGGTAAGAGCATGCGTTCTTGCAGAGAACCAAAGTTCAGTTTCCAGCACTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR-3UTR CCA 90 bp | GCTAGAGCCACAGCTCTCTTCATGTTTTCTTTTAACAGTTTCACTAAGTTGCCCAGAAGTAGCTTCCTGTaGGAAAACTGGGTCACACAG | + |
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Preference number: 2 (lower is better) Translates to: ARATALFMFSFNSFTKLPRSSFL*ENWVTQ Trigger: CTGTGTGACCCAGTTTTCCCACAGGAAGCTACTTCT...GGGCAACTTAGTGAAACTGTTAAAAGAAAACATGAAGAGAGCTGTGGCTCTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR-3UTR GCA 90 bp | AAGAGATTTATTTTTAACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTTGGGGCAGGGGACCTGAGTaGCAAAACAAACCTTCAAGA | + |
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Preference number: 2 (lower is better) Translates to: KRFIFNSVCVCVCVCVCWGRGPE*QNKPSR Trigger: TCTTGAAGGTTTGTTTTGGCACTCAGGTCCCCTGCC...CCAACATACACACACACACACACACACACACACAGAGTTAAAAATAAATCTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR GCA 72 bp | GATGCTCTGCACCTTTCCTGGAGACATGGTCCTGGATaGCATCTCCAGGCCAAGGCACGAGCAGAGCAGGAT | + |
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Preference number: 3 (lower is better) Translates to: DALHLSWRHGPG*HLQAKARAEQD Trigger: ATCCTGCTCTGCTCGTGCCTTGGCCTGGAGATGGCATCCAGGACCATGTCTCCAGGAAAGGTGCAGAGCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR-3UTR CAA 90 bp | TTCCTGCCTCCACCTCCCAAATGCTGCGACGACAGGTGTGTGTCAGTGAGCTCAACAGGGTGCTGCCCCTaGAGTACCAGACAGGAAGTA | + |
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Preference number: 3 (lower is better) Translates to: FLPPPPKCCDDRCVSVSSTGCCP*STRQEV Trigger: TACTTCCTGTCTGGTACTCAAGGGGCAGCACCCTGT...TGAGCTCACTGACACACACCTGTCGTCGCAGCATTTGGGAGGTGGAGGCAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR-3UTR CAA 90 bp | GCAGCTCAGCTCATGACTGGTACAGAAGGGCTACTGCCTCAGACACATGCTGGATGGAACAGCACTTTCTaGGGGCCTATGGAAGCCTCC | + |
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Preference number: 3 (lower is better) Translates to: AAQLMTGTEGLLPQTHAGWNSTF*GPMEAS Trigger: GGAGGCTTCCATAGGCCCCAAGAAAGTGCTGTTCCA...TCCAGCATGTGTCTGAGGCAGTAGCCCTTCTGTACCAGTCATGAGCTGAGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 |
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| 3UTR TCA 72 bp | CTTTCTCACAGGGTAGACAGTGACTCTGCGGGTTTCTaGGGAGTTTGGGGACGACTCCCATGGCCTCCAAGA | + |
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Preference number: 3 (lower is better) Translates to: LSHRVDSDSAGF*GVWGRLPWPPR Trigger: TCTTGGAGGCCATGGGAGTCGTCCCCAAACTCCTCAGAAACCCGCAGAGTCACTGTCTACCCTGTGAGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR CCA 72 bp | TGGGCCATGCCATGGCAGGAGCTAAGCCAGAGCATATaGACACAACAGAAGGAGGAGGTTCTGGAACAGCAC | + |
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Preference number: 3 (lower is better) Translates to: WAMPWQELSQSI*TQQKEEVLEQH Trigger: GTGCTGTTCCAGAACCTCCTCCTTCTGTTGTGTCCATATGCTCTGGCTTAGCTCCTGCCATGGCATGGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| 3UTR TCA 72 bp | AGAGCTCCTGGCCCTCATGTGTGCAGCACCCTCACCTaGACCAACCATCCCAAGCAGTTCTCAGAAACAGAA | + |
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Preference number: 3 (lower is better) Translates to: RAPGPHVCSTLT*TNHPKQFSETE Trigger: TTCTGTTTCTGAGAACTGCTTGGGATGGTTGGTTCAGGTGAGGGTGCTGCACACATGAGGGCCAGGAGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR GCA 72 bp | ACCTGTCAGGTATCTAGCGGGCTTCTAAGGATGCTCTaGACCTTTCCTGGAGACATGGTCCTGGATGCCATC | + |
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Preference number: 3 (lower is better) Translates to: TCQVSSGLLRML*TFPGDMVLDAI Trigger: GATGGCATCCAGGACCATGTCTCCAGGAAAGGTGCAGAGCATCCTTAGAAGCCCGCTAGATACCTGACAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| 3UTR GCA 72 bp | AGAAAAACCCAGAACGGGCCAAGTGGTCACAGAGACTaGCCTCCCCATGCTTCTGAGTACAGTGAAGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: RKTQNGPSGHRD*PPHASEYSEGS Trigger: AGAGCCTTCACTGTACTCAGAAGCATGGGGAGGGCAGTCTCTGTGACCACTTGGCCCGTTCTGGGTTTTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| 3UTR-3UTR CAA 90 bp | ATCTGCACACAGGTGAACAGAGGTGCAGAGAAGCCTGGATGTGTCCTTCATTCCTGGAACAGCACTTTCTaGGGGCCTATGGAAGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: ICTQVNRGAEKPGCVLHSWNSTF*GPMEAS Trigger: GGAGGCTTCCATAGGCCCCAAGAAAGTGCTGTTCCA...GGAATGAAGGACACATCCAGGCTTCTCTGCACCTCTGTTCACCTGTGTGCAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| 3UTR TCA 72 bp | AAGATCACTAGCAGCAGCCGGCCTTACTGTATCCACTaGGCTGCTGCCCCTAAAAACTGCAGGGAAGATAGC | + |
|
Preference number: 3 (lower is better) Translates to: KITSSSRPYCIH*AAAPKNCREDS Trigger: GCTATCTTCCCTGCAGTTTTTAGGGGCAGCAGCTCAGTGGATACAGTAAGGCCGGCTGCTGCTAGTGATCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| 3UTR GCA 72 bp | GTAGACCAGGCTGGTCTCAAATTCAAGAGAGCTGCCTaGCTCTGCTTCCTGAGTGCTGTGACTAAGGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: VDQAGLKFKRAA*LCFLSAVTKVC Trigger: ACACACCTTAGTCACAGCACTCAGGAAGCAGAGGCAGGCAGCTCTCTTGAATTTGAGACCAGCCTGGTCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| 3UTR CCA 72 bp | CATCTGCACACAGGTGAACAGAGGTGCAGAGAAGCCTaGATGTGTCCTTCATTCCTAGAATCCCCTGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: HLHTGEQRCREA*MCPSFLESPAE Trigger: CTCTGCAGGGGATTCTAGGAATGAAGGACACATCCAGGCTTCTCTGCACCTCTGTTCACCTGTGTGCAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| 3UTR GCA 72 bp | CAGTTCAAGGGATCTAAAGCAACTCCCACAGGGTGCTaGCCCTTGAGTACCAGACAGGAAGTAATGAGAACC | + |
|
Preference number: 3 (lower is better) Translates to: QFKGSKATPTGC*PLSTRQEVMRT Trigger: GGTTCTCATTACTTCCTGTCTGGTACTCAAGGGGCAGCACCCTGTGGGAGTTGCTTTAGATCCCTTGAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| 3UTR CCA 72 bp | GAGATTTGGTCAAGCAAATGCAGCTCAGCTCATGACTaGTACAGAAGGGCTACTGCCTCAGACACATGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: EIWSSKCSSAHD*YRRATASDTCW Trigger: CCAGCATGTGTCTGAGGCAGTAGCCCTTCTGTACCAGTCATGAGCTGAGCTGCATTTGCTTGACCAAATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 |
||
| 3UTR TCA 72 bp | GGCCCAACCTCATCCCACATAACCTTTTCTCGTGCATaGAATCCCATCGTACTCTTTCCTGTCTGGCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: GPTSSHITFSRA*NPIVLFPVWPL Trigger: CAAAGGCCAGACAGGAAAGAGTACGATGGGATTTCATGCACGAGAAAAGGTTATGTGGGATGAGGTTGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| 3UTR GCA 72 bp | CTTCAGTTCAAGGGATCTAAAGCAACTCCCACAGGGTaGTGCCCCTTGAGTACCAGACAGGAAGTAATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LQFKGSKATPTG*CPLSTRQEVMR Trigger: TCTCATTACTTCCTGTCTGGTACTCAAGGGGCAGCACCCTGTGGGAGTTGCTTTAGATCCCTTGAACTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| 3UTR CCA 72 bp | GAGAACCATACTCAAAAGCTGTGTGTCCGACCACTCTaGGACCTGCTGAAACCTTCCTGTCCACATTACCAT | + |
|
Preference number: 3 (lower is better) Translates to: ENHTQKLCVRPL*DLLKPSCPHYH Trigger: ATGGTAATGTGGACAGGAAGGTTTCAGCAGGTCCCAGAGTGGTCGGACACACAGCTTTTGAGTATGGTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| 3UTR CCA 72 bp | CATTCTCTAGTCCTAGTGAGCAGGAAGGAAGGCAGGTaGTCTGTCCTAAGACCAGGTAGCTTAACAGTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: HSLVLVSRKEGR*SVLRPGSLTVS Trigger: GCTAACTGTTAAGCTACCTGGTCTTAGGACAGACCACCTGCCTTCCTTCCTGCTCACTAGGACTAGAGAATG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| 3UTR TCA 72 bp | AAGACCAACGAGGCAGCACCTCCAGGGCTGTGGGGCTaGTCATTTCCAGAGAAATATGATCTAACTTTATCG | + |
|
Preference number: 3 (lower is better) Translates to: KTNEAAPPGLWG*SFPEKYDLTLS Trigger: CGATAAAGTTAGATCATATTTCTCTGGAAATGATCAGCCCCACAGCCCTGGAGGTGCTGCCTCGTTGGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| 3UTR TCA 72 bp | CTCAAAAGCTGTGTGTCCGACCACTCTGGGACCTGCTaGAACCTTCCTGTCCACATTACCATTCTGAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LKSCVSDHSGTC*NLPVHITILSF Trigger: AAAACTCAGAATGGTAATGTGGACAGGAAGGTTTCAGCAGGTCCCAGAGTGGTCGGACACACAGCTTTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| 3UTR CCA 72 bp | GTTCTCTGCAAGAACGCATGCTCTTACCACTGGGCATaGCAGTACACTTCTTTAAAGCCAGTACTCAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: VLCKNACSYHWA*QYTSLKPVLRR Trigger: TCTCCTGAGTACTGGCTTTAAAGAAGTGTACTGCCATGCCCAGTGGTAAGAGCATGCGTTCTTGCAGAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| 3UTR TCA 72 bp | AAAAGAGATTTGGTCAAGCAAATGCAGCTCAGCTCATaGCTGGTACAGAAGGGCTACTGCCTCAGACACATG | + |
|
Preference number: 3 (lower is better) Translates to: KRDLVKQMQLSS*LVQKGYCLRHM Trigger: CATGTGTCTGAGGCAGTAGCCCTTCTGTACCAGTCATGAGCTGAGCTGCATTTGCTTGACCAAATCTCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 |
||
| 3UTR CCA 72 bp | ACTTTGGTTCTCTGCAAGAACGCATGCTCTTACCACTaGGCATGGCAGTACACTTCTTTAAAGCCAGTACTC | + |
|
Preference number: 3 (lower is better) Translates to: TLVLCKNACSYH*AWQYTSLKPVL Trigger: GAGTACTGGCTTTAAAGAAGTGTACTGCCATGCCCAGTGGTAAGAGCATGCGTTCTTGCAGAGAACCAAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| 3UTR TCA 72 bp | GGACCTGCTGAAACCTTCCTGTCCACATTACCATTCTaGGTTTTCAAGTCTCATCTTTGCCTAGGAATCAGC | + |
|
Preference number: 3 (lower is better) Translates to: GPAETFLSTLPF*VFKSHLCLGIS Trigger: GCTGATTCCTAGGCAAAGATGAGACTTGAAAACTCAGAATGGTAATGTGGACAGGAAGGTTTCAGCAGGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| 3UTR TCA 72 bp | AGAGCTAGAGTTATAGGCAGTGGTGAACCACCATCATaGGTGCTGGAAACTGAACTTTGGTTCTCTGCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RARVIGSGEPPS*VLETELWFSAR Trigger: TCTTGCAGAGAACCAAAGTTCAGTTTCCAGCACTCATGATGGTGGTTCACCACTGCCTATAACTCTAGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| 3UTR TCA 72 bp | ACATCACTGTTCATCACCAGAGTAAAATGGCCACAGTaGGACTACATCCCAAAGGAGTCACAGATGGATTGC | + |
|
Preference number: 3 (lower is better) Translates to: TSLFITRVKWPQ*DYIPKESQMDC Trigger: GCAATCCATCTGTGACTCCTTTGGGATGTAGTCTCACTGTGGCCATTTTACTCTGGTGATGAACAGTGATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097734.11 |
||
| 3UTR-3UTR CAA 90 bp | AGAGCCACAGCTCTCTTCATGTTTTCTTTTAACAGTTTCACTAAGTTGCCCAGGAGGAAACTGCAAGAGTaGCATTATTTCCCAGTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: RATALFMFSFNSFTKLPRRKLQE*HYFPVW Trigger: CCACACTGGGAAATAATGCAACTCTTGCAGTTTCCT...CCTGGGCAACTTAGTGAAACTGTTAAAAGAAAACATGAAGAGAGCTGTGGCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| 3UTR TCA 72 bp | TCCAGGGCTGTGGGGCTGATCATTTCCAGAGAAATATaGTCTAACTTTATCGTAATCTTTCAGTTTTCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SRAVGLIISREI*SNFIVIFQFSR Trigger: CCTTGAAAACTGAAAGATTACGATAAAGTTAGATCATATTTCTCTGGAAATGATCAGCCCCACAGCCCTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| 3UTR TCA 72 bp | AGCAGGGGGCAGTGCCTTTACTACACATTTAAGCTGTaGTATGACATAATTATCAATTCCCAAACTAACTGG | + |
|
Preference number: 3 (lower is better) Translates to: SRGQCLYYTFKL*YDIIINSQTNW Trigger: CCAGTTAGTTTGGGAATTGATAATTATGTCATATCACAGCTTAAATGTGTAGTAAAGGCACTGCCCCCTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| CDS-3UTR TCA 90 bp | TGCAGCTCAGCTCATGACTGGTACAGAAGGGCTACTGCCTCAGACACATGCTGGAAGAACCAGAGGCCATaGGCAGCTAGACCACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CSSAHDWYRRATASDTCWKNQRP*AARPQR Trigger: CCTCTGTGGTCTAGCTGCTCATGGCCTCTGGTTCTT...CCAGCATGTGTCTGAGGCAGTAGCCCTTCTGTACCAGTCATGAGCTGAGCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 |
||
| CDS-3UTR TCA 90 bp | GCCATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACACAACAGAAGGAGGAGGGTGGTCTGGGGGCATaGTCTCATTTTCCTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AMPWQELSQSIWTQQKEEGGLGA*SHFPPC Trigger: ACAGGGAGGAAAATGAGATCATGCCCCCAGACCACC...CTCCTCCTTCTGTTGTGTCCATATGCTCTGGCTTAGCTCCTGCCATGGCATGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGCCATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACACAACAGAAGGAAGTCAGCAGCAGGTCTaGAGGAGGATTGTCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGHAMAGAKPEHMDTTEGSQQQV*RRIVCL Trigger: CAGGCAGACAATCCTCCTGCAGACCTGCTGCTGACT...TCCTTCTGTTGTGTCCATATGCTCTGGCTTAGCTCCTGCCATGGCATGGCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR GCA 90 bp | GCCATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACACAACAGAAGGAGGAGAGTCAGCAGCAGGTCTaGAGGAGGATTGTCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AMPWQELSQSIWTQQKEESQQQV*RRIVCL Trigger: CAGGCAGACAATCCTCCTGCAGACCTGCTGCTGACT...CTCCTCCTTCTGTTGTGTCCATATGCTCTGGCTTAGCTCCTGCCATGGCATGGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR CCA 90 bp | GCCATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACACAACAGAAGGAGGAGTCCTCGGGCTCCAGGTaGTGGTTCTGGTTCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: AMPWQELSQSIWTQQKEESSGSR*WFWFSS Trigger: TGATGAGAACCAGAACCACCACCTGGAGCCCGAGGA...CTCCTCCTTCTGTTGTGTCCATATGCTCTGGCTTAGCTCCTGCCATGGCATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR TCA 90 bp | GTCCGACCACTCTGGGACCTGCTGAAACCTTCCTGTCCACATTACCATTCTGAGAAGAACCAGAGGCCATaGGCAGCTAGACCACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VRPLWDLLKPSCPHYHSEKNQRP*AARPQR Trigger: CCTCTGTGGTCTAGCTGCTCATGGCCTCTGGTTCTT...CTCAGAATGGTAATGTGGACAGGAAGGTTTCAGCAGGTCCCAGAGTGGTCGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| CDS-3UTR TCA 90 bp | CCAAAGGAGTCACAGATGGATTGCTGTGAGGGCACCAGACTCCCTGAAGCTCTGGCTTCTCCGTGGCTCTaGGTCTTCATCAAACCCATC | + |
|
Preference number: 4 (lower is better) Translates to: PKESQMDCCEGTRLPEALASPWL*VFIKPI Trigger: GATGGGTTTGATGAAGACTCAGAGCCACGGAGAAGC...CAGAGCTTCAGGGAGTCTGGTGCCCTCACAGCAATCCATCTGTGACTCCTTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097734.11 |
||
| CDS-3UTR TCA 90 bp | TGCAGCTCAGCTCATGACTGGTACAGAAGGGCTACTGCCTCAGACACATGCTGGAGAACTCACTGTACTTaGGGATCTCCTCGGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CSSAHDWYRRATASDTCWRTHCT*GSPRAP Trigger: TGGAGCCCGAGGAGATCCTCAAGTACAGTGAGTTCT...CCAGCATGTGTCTGAGGCAGTAGCCCTTCTGTACCAGTCATGAGCTGAGCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 |
||
| CDS-3UTR TCA 90 bp | AAGGAGTCACAGATGGATTGCTGTGAGGGCACCAGACTCCCTGAAGCTCTGAAAAAGAACCAGAGGCCATaGGCAGCTAGACCACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KESQMDCCEGTRLPEALKKNQRP*AARPQR Trigger: CCTCTGTGGTCTAGCTGCTCATGGCCTCTGGTTCTT...TTTCAGAGCTTCAGGGAGTCTGGTGCCCTCACAGCAATCCATCTGTGACTCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097734.11 |
||
| CDS-3UTR TCA 90 bp | ATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACACAACAGAAGGAGGAGGTTAAGAACCAGAGGCCATaGGCAGCTAGACCACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: MPWQELSQSIWTQQKEEVKNQRP*AARPQR Trigger: CCTCTGTGGTCTAGCTGCTCATGGCCTCTGGTTCTT...AACCTCCTCCTTCTGTTGTGTCCATATGCTCTGGCTTAGCTCCTGCCATGGCAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR TCA 90 bp | ATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACACAACAGAAGGAGGAGGTTGGTGGTCTGGGGGCATaGTCTCATTTTCCTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: MPWQELSQSIWTQQKEEVGGLGA*SHFPPC Trigger: ACAGGGAGGAAAATGAGATCATGCCCCCAGACCACC...AACCTCCTCCTTCTGTTGTGTCCATATGCTCTGGCTTAGCTCCTGCCATGGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR TCA 90 bp | AGTGAGACTACATCCCAAAGGAGTCACAGATGGATTGCTGTGAGGGCACCAGACGGTGGTCTGGGGGCATaGTCTCATTTTCCTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SETTSQRSHRWIAVRAPDGGLGA*SHFPPC Trigger: ACAGGGAGGAAAATGAGATCATGCCCCCAGACCACC...GTCTGGTGCCCTCACAGCAATCCATCTGTGACTCCTTTGGGATGTAGTCTCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097734.11 |
||
| CDS-3UTR TCA 90 bp | GAGTCACAGATGGATTGCTGTGAGGGCACCAGACTCCCTGAAGCTCTGAAAAGCCTACCTTGGAAAAGATaGCCATCAGCTTCCTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ESQMDCCEGTRLPEALKSLPWKR*PSASSG Trigger: GCCGGAGGAAGCTGATGGTCATCTTTTCCAAGGTAG...GCTTTTCAGAGCTTCAGGGAGTCTGGTGCCCTCACAGCAATCCATCTGTGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097734.11 |
||
| CDS-3UTR TCA 90 bp | GGGCCTATGGAAGCCTCCGGACTCAGGGTAGATAGCATTTTAGACCCAATCTGGCTACCTTGGAAAAGATaGCCATCAGCTTCCTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GPMEASGLRVDSILDPIWLPWKR*PSASSG Trigger: GCCGGAGGAAGCTGATGGTCATCTTTTCCAAGGTAG...CCAGATTGGGTCTAAAATGCTATCTACCCTGAGTCCGGAGGCTTCCATAGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR TCA 90 bp | GGCCACAGTGAGACTACATCCCAAAGGAGTCACAGATGGATTGCTGTGAGGGCAGCTCCTCATGGTTCTTaGTGGCTTCAGCAATCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GHSETTSQRSHRWIAVRAAPHGS*WLQQSP Trigger: GGGAGATTGCTGAAGCCATCAAGAACCATGAGGAGC...TGCCCTCACAGCAATCCATCTGTGACTCCTTTGGGATGTAGTCTCACTGTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097734.11 |
||
| CDS-3UTR TCA 90 bp | GCCATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACACAACAGAAGGAGGAGCTCAGGGTGAAGGAATaGAAGGAACTCGTCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AMPWQELSQSIWTQQKEELRVKE*KELVLS Trigger: ACTGAGGACGAGTTCCTTTCATTCCTTCACCCTGAG...CTCCTCCTTCTGTTGTGTCCATATGCTCTGGCTTAGCTCCTGCCATGGCATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR GCA 90 bp | GCAGCTCAGCTCATGACTGGTACAGAAGGGCTACTGCCTCAGACACATGCTGGAACGGCCTCCTGGAAGTaGTCTGCTGTTTTCTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: AAQLMTGTEGLLPQTHAGTASWK*SAVFSI Trigger: TATGGAGAAAACAGCAGAGCACTTCCAGGAGGCCGT...TCCAGCATGTGTCTGAGGCAGTAGCCCTTCTGTACCAGTCATGAGCTGAGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGCCATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACACAACAGAAGGATCCAGGTGGTGGTTCTaGTTCTCATCAGCAATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGHAMAGAKPEHMDTTEGSRWWF*FSSAMA Trigger: TGCCATTGCTGATGAGAACCAGAACCACCACCTGGA...TCCTTCTGTTGTGTCCATATGCTCTGGCTTAGCTCCTGCCATGGCATGGCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR CCA 90 bp | TGCAGCTCAGCTCATGACTGGTACAGAAGGGCTACTGCCTCAGACACATGCTGGTCCAGGTGGTGGTTCTaGTTCTCATCAGCAATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CSSAHDWYRRATASDTCWSRWWF*FSSAMA Trigger: TGCCATTGCTGATGAGAACCAGAACCACCACCTGGA...CCAGCATGTGTCTGAGGCAGTAGCCCTTCTGTACCAGTCATGAGCTGAGCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 |
||
| CDS-3UTR CCA 90 bp | GCCATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACACAACAGAAGGAGGAGTCCAGGTGGTGGTTCTaGTTCTCATCAGCAATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AMPWQELSQSIWTQQKEESRWWF*FSSAMA Trigger: TGCCATTGCTGATGAGAACCAGAACCACCACCTGGA...CTCCTCCTTCTGTTGTGTCCATATGCTCTGGCTTAGCTCCTGCCATGGCATGGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR TCA 90 bp | CGACAGGTGTGTGTCAGTGAGCTCAACGCGGGCCTTCTTTTCTTACACTCAAACTCTTTCCCGAGTAGATaGGTGGTTGGCAGGTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: RQVCVSELNAGLLFLHSNSFPSR*VVGRSS Trigger: GCTAGACCTGCCAACCACTCATCTACTCGGGAAAGA...GTTTGAGTGTAAGAAAAGAAGGCCCGCGTTGAGCTCACTGACACACACCTGTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| CDS-3UTR TCA 90 bp | TTAATAAACCTGGGCCATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACACAGGTGGTCTGGGGGCATaGTCTCATTTTCCTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LINLGHAMAGAKPEHMDTGGLGA*SHFPPC Trigger: ACAGGGAGGAAAATGAGATCATGCCCCCAGACCACC...TGTGTCCATATGCTCTGGCTTAGCTCCTGCCATGGCATGGCCCAGGTTTATTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR TCA 90 bp | CAGATGGATTGCTGTGAGGGCACCAGACTCCCTGAAGCTCTGAAAAGCATCTTCCCCAGGAAAACCTCCTaGTGGAAGTCCTTGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QMDCCEGTRLPEALKSIFPRKTS*WKSLLR Trigger: CCTCAACAAGGACTTCCATCAGGAGGTTTTCCTGGG...GAAGATGCTTTTCAGAGCTTCAGGGAGTCTGGTGCCCTCACAGCAATCCATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097734.11 |
||
| CDS-3UTR TCA 90 bp | GGACTCAGGGTAGATAGCATTTTAGACCCAATCTGGACCCAGCCATCCACAGGTCCCAGGAAAACCTCCTaGTGGAAGTCCTTGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLRVDSILDPIWTQPSTGPRKTS*WKSLLR Trigger: CCTCAACAAGGACTTCCATCAGGAGGTTTTCCTGGG...ACCTGTGGATGGCTGGGTCCAGATTGGGTCTAAAATGCTATCTACCCTGAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR TCA 90 bp | GGACTCAGGGTAGATAGCATTTTAGACCCAATCTGGACCCAGCCATCCACAGGTGCTTCTCCGTGGCTCTaGGTCTTCATCAAACCCATC | + |
|
Preference number: 4 (lower is better) Translates to: GLRVDSILDPIWTQPSTGASPWL*VFIKPI Trigger: GATGGGTTTGATGAAGACTCAGAGCCACGGAGAAGC...ACCTGTGGATGGCTGGGTCCAGATTGGGTCTAAAATGCTATCTACCCTGAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR TCA 90 bp | CCTATGGAAGCCTCCGGACTCAGGGTAGATAGCATTTTAGACCCAATCTGGACCGCTCCTCATGGTTCTTaGTGGCTTCAGCAATCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PMEASGLRVDSILDPIWTAPHGS*WLQQSP Trigger: GGGAGATTGCTGAAGCCATCAAGAACCATGAGGAGC...GGTCCAGATTGGGTCTAAAATGCTATCTACCCTGAGTCCGGAGGCTTCCATAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR TCA 90 bp | ATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACACAACAGAAGGAGGAGGTTCCACAGGCAGAGAGATaGACTCGGGCAGAGATAACT | + |
|
Preference number: 4 (lower is better) Translates to: MPWQELSQSIWTQQKEEVPQAER*TRAEIT Trigger: AGTTATCTCTGCCCGAGTTCATCTCTCTGCCTGTGG...AACCTCCTCCTTCTGTTGTGTCCATATGCTCTGGCTTAGCTCCTGCCATGGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR CCA 90 bp | CGACAGGTGTGTGTCAGTGAGCTCAACGCGGGCCTTCTTTTCTTACACTCAAACTTCACCCCATTCAGGTaGTCTGGGGGCATGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RQVCVSELNAGLLFLHSNFTPFR*SGGMIS Trigger: TGAGATCATGCCCCCAGACCACCTGAATGGGGTGAA...GTTTGAGTGTAAGAAAAGAAGGCCCGCGTTGAGCTCACTGACACACACCTGTCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| CDS-3UTR CCA 90 bp | GGACTCAGGGTAGATAGCATTTTAGACCCAATCTGGACCCAGCCATCCACAGGTTTCACCCCATTCAGGTaGTCTGGGGGCATGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLRVDSILDPIWTQPSTGFTPFR*SGGMIS Trigger: TGAGATCATGCCCCCAGACCACCTGAATGGGGTGAA...ACCTGTGGATGGCTGGGTCCAGATTGGGTCTAAAATGCTATCTACCCTGAGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR CCA 90 bp | TGCAGCTCAGCTCATGACTGGTACAGAAGGGCTACTGCCTCAGACACATGCTGGTCTCTAGCTCCTCCATaGTCACAATCCCATCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: CSSAHDWYRRATASDTCWSLAPP*SQSHHG Trigger: ACCATGATGGGATTGTGACCATGGAGGAGCTAGAGA...CCAGCATGTGTCTGAGGCAGTAGCCCTTCTGTACCAGTCATGAGCTGAGCTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 |
||
| CDS-3UTR CCA 90 bp | TCTTTAATAAACCTGGGCCATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACTCCTCGGGCTCCAGGTaGTGGTTCTGGTTCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SLINLGHAMAGAKPEHMDSSGSR*WFWFSS Trigger: TGATGAGAACCAGAACCACCACCTGGAGCCCGAGGA...GTCCATATGCTCTGGCTTAGCTCCTGCCATGGCATGGCCCAGGTTTATTAAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR TCA 90 bp | GTAGATAGCATTTTAGACCCAATCTGGACCCAGCCATCCACAGGTCTCACTGGACCCAGGAAAACCTCCTaGTGGAAGTCCTTGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VDSILDPIWTQPSTGLTGPRKTS*WKSLLR Trigger: CCTCAACAAGGACTTCCATCAGGAGGTTTTCCTGGG...TCCAGTGAGACCTGTGGATGGCTGGGTCCAGATTGGGTCTAAAATGCTATCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTAATAAACCTGGGCCATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACCCCAGGAAAACCTCCTaGTGGAAGTCCTTGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLINLGHAMAGAKPEHMDPRKTS*WKSLLR Trigger: CCTCAACAAGGACTTCCATCAGGAGGTTTTCCTGGG...GTCCATATGCTCTGGCTTAGCTCCTGCCATGGCATGGCCCAGGTTTATTAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR TCA 90 bp | GTAGATAGCATTTTAGACCCAATCTGGACCCAGCCATCCACAGGTCTCACTGGAGCTTCTCCGTGGCTCTaGGTCTTCATCAAACCCATC | + |
|
Preference number: 4 (lower is better) Translates to: VDSILDPIWTQPSTGLTGASPWL*VFIKPI Trigger: GATGGGTTTGATGAAGACTCAGAGCCACGGAGAAGC...TCCAGTGAGACCTGTGGATGGCTGGGTCCAGATTGGGTCTAAAATGCTATCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTAATAAACCTGGGCCATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACCTACCTTGGAAAAGATaGCCATCAGCTTCCTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLINLGHAMAGAKPEHMDLPWKR*PSASSG Trigger: GCCGGAGGAAGCTGATGGTCATCTTTTCCAAGGTAG...GTCCATATGCTCTGGCTTAGCTCCTGCCATGGCATGGCCCAGGTTTATTAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTAATAAACCTGGGCCATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACGCTCCTCATGGTTCTTaGTGGCTTCAGCAATCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLINLGHAMAGAKPEHMDAPHGS*WLQQSP Trigger: GGGAGATTGCTGAAGCCATCAAGAACCATGAGGAGC...GTCCATATGCTCTGGCTTAGCTCCTGCCATGGCATGGCCCAGGTTTATTAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR TCA 90 bp | GGACTCAGGGTAGATAGCATTTTAGACCCAATCTGGACCCAGCCATCCACAGGTCTCAGGGTGAAGGAATaGAAGGAACTCGTCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GLRVDSILDPIWTQPSTGLRVKE*KELVLS Trigger: ACTGAGGACGAGTTCCTTTCATTCCTTCACCCTGAG...ACCTGTGGATGGCTGGGTCCAGATTGGGTCTAAAATGCTATCTACCCTGAGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR TCA 90 bp | GAACTCTGCTGTCCTTGGCTGTCACACTTGGCCAAACAGTTTAGCATCTGCACACCACAGGCAGAGAGATaGACTCGGGCAGAGATAACT | + |
|
Preference number: 4 (lower is better) Translates to: ELCCPWLSHLAKQFSICTPQAER*TRAEIT Trigger: AGTTATCTCTGCCCGAGTTCATCTCTCTGCCTGTGG...TGTGCAGATGCTAAACTGTTTGGCCAAGTGTGACAGCCAAGGACAGCAGAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| CDS-3UTR TCA 90 bp | GTAGATAGCATTTTAGACCCAATCTGGACCCAGCCATCCACAGGTCTCACTGGACCACAGGCAGAGAGATaGACTCGGGCAGAGATAACT | + |
|
Preference number: 4 (lower is better) Translates to: VDSILDPIWTQPSTGLTGPQAER*TRAEIT Trigger: AGTTATCTCTGCCCGAGTTCATCTCTCTGCCTGTGG...TCCAGTGAGACCTGTGGATGGCTGGGTCCAGATTGGGTCTAAAATGCTATCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR TCA 90 bp | TTAATAAACCTGGGCCATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACACAAGAACTCACTGTACTTaGGGATCTCCTCGGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LINLGHAMAGAKPEHMDTRTHCT*GSPRAP Trigger: TGGAGCCCGAGGAGATCCTCAAGTACAGTGAGTTCT...TGTGTCCATATGCTCTGGCTTAGCTCCTGCCATGGCATGGCCCAGGTTTATTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR GCA 90 bp | ATCCCAAAGGAGTCACAGATGGATTGCTGTGAGGGCACCAGACTCCCTGAAGCTTCCACAGCCCTGAAGTaGAGTTTGTTTTCCTTGACG | + |
|
Preference number: 4 (lower is better) Translates to: IPKESQMDCCEGTRLPEASTALK*SLFSLT Trigger: CGTCAAGGAAAACAAACTGCACTTCAGGGCTGTGGA...AGCTTCAGGGAGTCTGGTGCCCTCACAGCAATCCATCTGTGACTCCTTTGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097734.11 |
||
| CDS-3UTR GCA 90 bp | GGGCCTATGGAAGCCTCCGGACTCAGGGTAGATAGCATTTTAGACCCAATCTGGTCCACAGCCCTGAAGTaGAGTTTGTTTTCCTTGACG | + |
|
Preference number: 4 (lower is better) Translates to: GPMEASGLRVDSILDPIWSTALK*SLFSLT Trigger: CGTCAAGGAAAACAAACTGCACTTCAGGGCTGTGGA...CCAGATTGGGTCTAAAATGCTATCTACCCTGAGTCCGGAGGCTTCCATAGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR CCA 90 bp | GAACTCTGCTGTCCTTGGCTGTCACACTTGGCCAAACAGTTTAGCATCTGCACATCCTTGACGGCCTCCTaGAAGTGCTCTGCTGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ELCCPWLSHLAKQFSICTSLTAS*KCSAVF Trigger: GAAAACAGCAGAGCACTTCCAGGAGGCCGTCAAGGA...TGTGCAGATGCTAAACTGTTTGGCCAAGTGTGACAGCCAAGGACAGCAGAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| CDS-3UTR CCA 90 bp | GGGCCTATGGAAGCCTCCGGACTCAGGGTAGATAGCATTTTAGACCCAATCTGGTCTCTAGCTCCTCCATaGTCACAATCCCATCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: GPMEASGLRVDSILDPIWSLAPP*SQSHHG Trigger: ACCATGATGGGATTGTGACCATGGAGGAGCTAGAGA...CCAGATTGGGTCTAAAATGCTATCTACCCTGAGTCCGGAGGCTTCCATAGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR CCA 90 bp | GGCTACTGCCTCAGACACATGCTGGAGAGGACACATAGCCTATTAAGCATATCTTCCTCGGGCTCCAGGTaGTGGTTCTGGTTCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: GYCLRHMLERTHSLLSISSSGSR*WFWFSS Trigger: TGATGAGAACCAGAACCACCACCTGGAGCCCGAGGA...AGATATGCTTAATAGGCTATGTGTCCTCTCCAGCATGTGTCTGAGGCAGTAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 |
||
| CDS-3UTR CCA 90 bp | CACAGTGAGACTACATCCCAAAGGAGTCACAGATGGATTGCTGTGAGGGCACCATGGACAGGCATATACTaGTCTCACCAGAGGAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: HSETTSQRSHRWIAVRAPWTGIY*SHQRNR Trigger: CCTGTTCCTCTGGTGAGACCAGTATATGCCTGTCCA...TGGTGCCCTCACAGCAATCCATCTGTGACTCCTTTGGGATGTAGTCTCACTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097734.11 |
||
| CDS-3UTR TCA 90 bp | CTGGGCCATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACACAACAGAAGGATCTGTTTGGCTTCGTTaGGGGCATTGTATTCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGHAMAGAKPEHMDTTEGSVWLR*GHCIHS Trigger: TGAATGAATACAATGCCCTCAACGAAGCCAAACAGA...TCCTTCTGTTGTGTCCATATGCTCTGGCTTAGCTCCTGCCATGGCATGGCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR GCA 90 bp | CTGGATGTGTCCTTCATTCCTAGAATCCCCTGCAGAGGATCTGTACAGGACAGCTCCACAGCCCTGAAGTaGAGTTTGTTTTCCTTGACG | + |
|
Preference number: 4 (lower is better) Translates to: LDVSFIPRIPCRGSVQDSSTALK*SLFSLT Trigger: CGTCAAGGAAAACAAACTGCACTTCAGGGCTGTGGA...GCTGTCCTGTACAGATCCTCTGCAGGGGATTCTAGGAATGAAGGACACATCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| CDS-3UTR GCA 90 bp | ATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACACAACAGAAGGAGGAGGTTTCCACAGCCCTGAAGTaGAGTTTGTTTTCCTTGACG | + |
|
Preference number: 4 (lower is better) Translates to: MPWQELSQSIWTQQKEEVSTALK*SLFSLT Trigger: CGTCAAGGAAAACAAACTGCACTTCAGGGCTGTGGA...AACCTCCTCCTTCTGTTGTGTCCATATGCTCTGGCTTAGCTCCTGCCATGGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR CCA 90 bp | TGCAGCTCAGCTCATGACTGGTACAGAAGGGCTACTGCCTCAGACACATGCTGGATCTCCCTTTCATTGTaGCCTTTGCTTGCCAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: CSSAHDWYRRATASDTCWISLSL*PLLAKN Trigger: GTTTTTGGCAAGCAAAGGCCACAATGAAAGGGAGAT...CCAGCATGTGTCTGAGGCAGTAGCCCTTCTGTACCAGTCATGAGCTGAGCTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 |
||
| CDS-3UTR CCA 90 bp | GGGCCTATGGAAGCCTCCGGACTCAGGGTAGATAGCATTTTAGACCCAATCTGGACTTTGAGCTCCTCATaGTTCTTGATGGCTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GPMEASGLRVDSILDPIWTLSSS*FLMASA Trigger: TGCTGAAGCCATCAAGAACCATGAGGAGCTCAAAGT...CCAGATTGGGTCTAAAATGCTATCTACCCTGAGTCCGGAGGCTTCCATAGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR CCA 90 bp | GCTCAGACTCTGCTGCTGCTCCCACACTCAAGGCCCAACCTCATCCCACATAACTTGTCATCAATGTCTTaGCCTTGTTGGTTCTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: AQTLLLLPHSRPNLIPHNLSSMS*PCWFST Trigger: TGTTGAGAACCAACAAGGCCAAGACATTGATGACAA...GTTATGTGGGATGAGGTTGGGCCTTGAGTGTGGGAGCAGCAGCAGAGTCTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| 3UTR CAA 72 bp | AAGGGATCTAAAGCAACTCCCACAGGGTGCTGCCCCTaGAGTACCAGACAGGAAGTAATGAGAACCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KGSKATPTGCCP*STRQEVMRTSE Trigger: TTCAGAGGTTCTCATTACTTCCTGTCTGGTACTCAAGGGGCAGCACCCTGTGGGAGTTGCTTTAGATCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| CDS-3UTR TCA 90 bp | CATGAGTGCTGGAAACTGAACTTTGGTTCTCTGCAAGAACGCATGCTCTTACCAGCTCCTCATGGTTCTTaGTGGCTTCAGCAATCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HECWKLNFGSLQERMLLPAPHGS*WLQQSP Trigger: GGGAGATTGCTGAAGCCATCAAGAACCATGAGGAGC...TGGTAAGAGCATGCGTTCTTGCAGAGAACCAAAGTTCAGTTTCCAGCACTCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| CDS-3UTR TCA 90 bp | CATGAGTGCTGGAAACTGAACTTTGGTTCTCTGCAAGAACGCATGCTCTTACCAAGAACTCACTGTACTTaGGGATCTCCTCGGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HECWKLNFGSLQERMLLPRTHCT*GSPRAP Trigger: TGGAGCCCGAGGAGATCCTCAAGTACAGTGAGTTCT...TGGTAAGAGCATGCGTTCTTGCAGAGAACCAAAGTTCAGTTTCCAGCACTCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| CDS-3UTR GCA 90 bp | CAGATGGATTGCTGTGAGGGCACCAGACTCCCTGAAGCTCTGAAAAGCATCTTCCTCCTGGAAGTGCTCTaGTGTTTTCTCCATAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: QMDCCEGTRLPEALKSIFLLEVL*CFLHNP Trigger: TGGATTATGGAGAAAACAGCAGAGCACTTCCAGGAG...GAAGATGCTTTTCAGAGCTTCAGGGAGTCTGGTGCCCTCACAGCAATCCATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097734.11 |
||
| CDS-3UTR GCA 90 bp | ATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACACAACAGAAGGAGGAGGTTCTCCTGGAAGTGCTCTaGTGTTTTCTCCATAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: MPWQELSQSIWTQQKEEVLLEVL*CFLHNP Trigger: TGGATTATGGAGAAAACAGCAGAGCACTTCCAGGAG...AACCTCCTCCTTCTGTTGTGTCCATATGCTCTGGCTTAGCTCCTGCCATGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR GCA 90 bp | GGACTCAGGGTAGATAGCATTTTAGACCCAATCTGGACCCAGCCATCCACAGGTCTCCTGGAAGTGCTCTaGTGTTTTCTCCATAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLRVDSILDPIWTQPSTGLLEVL*CFLHNP Trigger: TGGATTATGGAGAAAACAGCAGAGCACTTCCAGGAG...ACCTGTGGATGGCTGGGTCCAGATTGGGTCTAAAATGCTATCTACCCTGAGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR CCA 90 bp | GAGTCACAGATGGATTGCTGTGAGGGCACCAGACTCCCTGAAGCTCTGAAAAGCATCTCCCTTTCATTGTaGCCTTTGCTTGCCAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ESQMDCCEGTRLPEALKSISLSL*PLLAKN Trigger: GTTTTTGGCAAGCAAAGGCCACAATGAAAGGGAGAT...GCTTTTCAGAGCTTCAGGGAGTCTGGTGCCCTCACAGCAATCCATCTGTGACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097734.11 |
||
| CDS-3UTR CCA 90 bp | AGTGAGACTACATCCCAAAGGAGTCACAGATGGATTGCTGTGAGGGCACCAGACACTTTGAGCTCCTCATaGTTCTTGATGGCTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SETTSQRSHRWIAVRAPDTLSSS*FLMASA Trigger: TGCTGAAGCCATCAAGAACCATGAGGAGCTCAAAGT...GTCTGGTGCCCTCACAGCAATCCATCTGTGACTCCTTTGGGATGTAGTCTCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097734.11 |
||
| CDS-3UTR CCA 90 bp | GGACTCAGGGTAGATAGCATTTTAGACCCAATCTGGACCCAGCCATCCACAGGTACTTTGAGCTCCTCATaGTTCTTGATGGCTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLRVDSILDPIWTQPSTGTLSSS*FLMASA Trigger: TGCTGAAGCCATCAAGAACCATGAGGAGCTCAAAGT...ACCTGTGGATGGCTGGGTCCAGATTGGGTCTAAAATGCTATCTACCCTGAGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTAATAAACCTGGGCCATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACTCTCTAGCTCCTCCATaGTCACAATCCCATCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLINLGHAMAGAKPEHMDSLAPP*SQSHHG Trigger: ACCATGATGGGATTGTGACCATGGAGGAGCTAGAGA...GTCCATATGCTCTGGCTTAGCTCCTGCCATGGCATGGCCCAGGTTTATTAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR TCA 90 bp | ATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACACAACAGAAGGAGGAGGTTTCTGTTTGGCTTCGTTaGGGGCATTGTATTCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: MPWQELSQSIWTQQKEEVSVWLR*GHCIHS Trigger: TGAATGAATACAATGCCCTCAACGAAGCCAAACAGA...AACCTCCTCCTTCTGTTGTGTCCATATGCTCTGGCTTAGCTCCTGCCATGGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR GCA 90 bp | GCCATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACACAACAGAAGGAGGAGTTTCATTGTGGCCTTTaGTTGCCAAAAACTTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: AMPWQELSQSIWTQQKEEFHCGL*LPKTSL Trigger: AAGTGAAGTTTTTGGCAAGCAAAGGCCACAATGAAA...CTCCTCCTTCTGTTGTGTCCATATGCTCTGGCTTAGCTCCTGCCATGGCATGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTTTATTCCCACATCACTGTTCATCACCAGAGTAAAATGGCCACAGTGAGATCCTTGACGGCCTCCTaGAAGTGCTCTGCTGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RVYSHITVHHQSKMATVRSLTAS*KCSAVF Trigger: GAAAACAGCAGAGCACTTCCAGGAGGCCGTCAAGGA...TCTCACTGTGGCCATTTTACTCTGGTGATGAACAGTGATGTGGGAATAAACCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097734.11 |
||
| CDS-3UTR CCA 90 bp | ATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACACAACAGAAGGAGGAGGTTATCTCCCTTTCATTGTaGCCTTTGCTTGCCAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: MPWQELSQSIWTQQKEEVISLSL*PLLAKN Trigger: GTTTTTGGCAAGCAAAGGCCACAATGAAAGGGAGAT...AACCTCCTCCTTCTGTTGTGTCCATATGCTCTGGCTTAGCTCCTGCCATGGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR CCA 90 bp | CCTATGGAAGCCTCCGGACTCAGGGTAGATAGCATTTTAGACCCAATCTGGACCATCTCCCTTTCATTGTaGCCTTTGCTTGCCAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PMEASGLRVDSILDPIWTISLSL*PLLAKN Trigger: GTTTTTGGCAAGCAAAGGCCACAATGAAAGGGAGAT...GGTCCAGATTGGGTCTAAAATGCTATCTACCCTGAGTCCGGAGGCTTCCATAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR CCA 90 bp | GTAGATAGCATTTTAGACCCAATCTGGACCCAGCCATCCACAGGTCTCACTGGAACTTTGAGCTCCTCATaGTTCTTGATGGCTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VDSILDPIWTQPSTGLTGTLSSS*FLMASA Trigger: TGCTGAAGCCATCAAGAACCATGAGGAGCTCAAAGT...TCCAGTGAGACCTGTGGATGGCTGGGTCCAGATTGGGTCTAAAATGCTATCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS-3UTR TCA 90 bp | GCTAGAGCCACAGCTCTCTTCATGTTTTCTTTTAACAGTTTCACTAAGTTGCCCCTACCTTGGAAAAGATaGCCATCAGCTTCCTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ARATALFMFSFNSFTKLPLPWKR*PSASSG Trigger: GCCGGAGGAAGCTGATGGTCATCTTTTCCAAGGTAG...GGGCAACTTAGTGAAACTGTTAAAAGAAAACATGAAGAGAGCTGTGGCTCTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| CDS-3UTR GCA 90 bp | GCCATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACACAACAGAAGGAGGAGATTGTGGCCTTTGCTTaGCAAAAACTTCACTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: AMPWQELSQSIWTQQKEEIVAFA*QKLHFI Trigger: TATAAAGTGAAGTTTTTGGCAAGCAAAGGCCACAAT...CTCCTCCTTCTGTTGTGTCCATATGCTCTGGCTTAGCTCCTGCCATGGCATGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR GCA 90 bp | GGGCCTATGGAAGCCTCCGGACTCAGGGTAGATAGCATTTTAGACCCAATCTGGTTTCATTGTGGCCTTTaGTTGCCAAAAACTTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: GPMEASGLRVDSILDPIWFHCGL*LPKTSL Trigger: AAGTGAAGTTTTTGGCAAGCAAAGGCCACAATGAAA...CCAGATTGGGTCTAAAATGCTATCTACCCTGAGTCCGGAGGCTTCCATAGGCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS-3UTR CCA 90 bp | GGACTCAGGGTAGATAGCATTTTAGACCCAATCTGGACCCAGCCATCCACAGGTTTGTCATCAATGTCTTaGCCTTGTTGGTTCTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: GLRVDSILDPIWTQPSTGLSSMS*PCWFST Trigger: TGTTGAGAACCAACAAGGCCAAGACATTGATGACAA...ACCTGTGGATGGCTGGGTCCAGATTGGGTCTAAAATGCTATCTACCCTGAGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR CCA 90 bp | TTAATAAACCTGGGCCATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACACAGGTTCTCATCAGCAATaGCAATCATCTGTTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LINLGHAMAGAKPEHMDTGSHQQ*QSSVWL Trigger: AAGCCAAACAGATGATTGCCATTGCTGATGAGAACC...TGTGTCCATATGCTCTGGCTTAGCTCCTGCCATGGCATGGCCCAGGTTTATTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS-3UTR TCA 90 bp | GGCTACTGCCTCAGACACATGCTGGAGAGGACACATAGCCTATTAAGCATATCTTCTGTTTGGCTTCGTTaGGGGCATTGTATTCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: GYCLRHMLERTHSLLSISSVWLR*GHCIHS Trigger: TGAATGAATACAATGCCCTCAACGAAGCCAAACAGA...AGATATGCTTAATAGGCTATGTGTCCTCTCCAGCATGTGTCTGAGGCAGTAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 |
||
| CDS-3UTR GCA 90 bp | CATGAGTGCTGGAAACTGAACTTTGGTTCTCTGCAAGAACGCATGCTCTTACCACTCCTGGAAGTGCTCTaGTGTTTTCTCCATAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: HECWKLNFGSLQERMLLPLLEVL*CFLHNP Trigger: TGGATTATGGAGAAAACAGCAGAGCACTTCCAGGAG...TGGTAAGAGCATGCGTTCTTGCAGAGAACCAAAGTTCAGTTTCCAGCACTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| CDS-3UTR GCA 90 bp | AGTGAGACTACATCCCAAAGGAGTCACAGATGGATTGCTGTGAGGGCACCAGACTTTCATTGTGGCCTTTaGTTGCCAAAAACTTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SETTSQRSHRWIAVRAPDFHCGL*LPKTSL Trigger: AAGTGAAGTTTTTGGCAAGCAAAGGCCACAATGAAA...GTCTGGTGCCCTCACAGCAATCCATCTGTGACTCCTTTGGGATGTAGTCTCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097734.11 |
||
| CDS-3UTR GCA 90 bp | CAGAATTTAACAACTGAAAAGAGATTTGGTCAAGCAAATGCAGCTCAGCTCATGAGTCAGCAGCAGGTCTaGAGGAGGATTGTCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QNLTTEKRFGQANAAQLMSQQQV*RRIVCL Trigger: CAGGCAGACAATCCTCCTGCAGACCTGCTGCTGACT...CATGAGCTGAGCTGCATTTGCTTGACCAAATCTCTTTTCAGTTGTTAAATTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 |
||
| CDS-3UTR CCA 90 bp | AATGAAAGGGTTTATTCCCACATCACTGTTCATCACCAGAGTAAAATGGCCACATTCACCCCATTCAGGTaGTCTGGGGGCATGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NERVYSHITVHHQSKMATFTPFR*SGGMIS Trigger: TGAGATCATGCCCCCAGACCACCTGAATGGGGTGAA...TGTGGCCATTTTACTCTGGTGATGAACAGTGATGTGGGAATAAACCCTTTCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000097734.11 |
||
| CDS-3UTR CCA 90 bp | GTAGATAGCATTTTAGACCCAATCTGGACCCAGCCATCCACAGGTCTCACTGGATTGTCATCAATGTCTTaGCCTTGTTGGTTCTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: VDSILDPIWTQPSTGLTGLSSMS*PCWFST Trigger: TGTTGAGAACCAACAAGGCCAAGACATTGATGACAA...TCCAGTGAGACCTGTGGATGGCTGGGTCCAGATTGGGTCTAAAATGCTATCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR CCA 90 bp | GGCTACTGCCTCAGACACATGCTGGAGAGGACACATAGCCTATTAAGCATATCTGGTTCTCATCAGCAATaGCAATCATCTGTTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GYCLRHMLERTHSLLSISGSHQQ*QSSVWL Trigger: AAGCCAAACAGATGATTGCCATTGCTGATGAGAACC...AGATATGCTTAATAGGCTATGTGTCCTCTCCAGCATGTGTCTGAGGCAGTAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 |
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| CDS-3UTR GCA 90 bp | AGTGAGACTACATCCCAAAGGAGTCACAGATGGATTGCTGTGAGGGCACCAGACATTGTGGCCTTTGCTTaGCAAAAACTTCACTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: SETTSQRSHRWIAVRAPDIVAFA*QKLHFI Trigger: TATAAAGTGAAGTTTTTGGCAAGCAAAGGCCACAAT...GTCTGGTGCCCTCACAGCAATCCATCTGTGACTCCTTTGGGATGTAGTCTCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097734.11 |
||
| CDS-3UTR GCA 90 bp | GTGGCAGTGCATATCTTTAATCCCAGCACTTTAGAAGCAGAGGCAGAGGCAGGTATTGTGGCCTTTGCTTaGCAAAAACTTCACTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: VAVHIFNPSTLEAEAEAGIVAFA*QKLHFI Trigger: TATAAAGTGAAGTTTTTGGCAAGCAAAGGCCACAAT...ACCTGCCTCTGCCTCTGCTTCTAAAGTGCTGGGATTAAAGATATGCACTGCCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| CDS-3UTR GCA 90 bp | TCTTTAATAAACCTGGGCCATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACATTGTGGCCTTTGCTTaGCAAAAACTTCACTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: SLINLGHAMAGAKPEHMDIVAFA*QKLHFI Trigger: TATAAAGTGAAGTTTTTGGCAAGCAAAGGCCACAAT...GTCCATATGCTCTGGCTTAGCTCCTGCCATGGCATGGCCCAGGTTTATTAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS-3UTR TCA 90 bp | AAGAGATTTATTTTTAACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTTGGCTCAGGGTGAAGGAATaGAAGGAACTCGTCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KRFIFNSVCVCVCVCVCWLRVKE*KELVLS Trigger: ACTGAGGACGAGTTCCTTTCATTCCTTCACCCTGAG...CCAACATACACACACACACACACACACACACACAGAGTTAAAAATAAATCTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
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| CDS TCA 90 bp | GCGGTTGCATCCATCAGAAGGACAAGGCCCAAGAACCAGAGGCCATaGGCAGCTAGACCACAGAGGGAACTCTGCCTGGGCGTCATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: AVASIRRTRPKNQRP*AARPQRELCLGVIA Trigger: GGCAATGACGCCCAGGCAGAGTTCCCTCTGTGGTCTAGCTGCTCATGGCCTCTGGTTCTTGGGCCTTGTCCTTCTGATGGATGCAACCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050078.13 ENSMUST00000097734.11 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS-3UTR CAA 90 bp | GCAGCTCAGCTCATGACTGGTACAGAAGGGCTACTGCCTCAGACACATGCTGGATCCTTGACCATGAACTaGAGCATGCCCCGGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: AAQLMTGTEGLLPQTHAGSLTMN*SMPRLC Trigger: GCACAGCCGGGGCATGCTCAAGTTCATGGTCAAGGA...TCCAGCATGTGTCTGAGGCAGTAGCCCTTCTGTACCAGTCATGAGCTGAGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 |
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| CDS-3UTR CAA 90 bp | CTGGGCCATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACACAACAGAAGGATCCTTGACCATGAACTaGAGCATGCCCCGGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LGHAMAGAKPEHMDTTEGSLTMN*SMPRLC Trigger: GCACAGCCGGGGCATGCTCAAGTTCATGGTCAAGGA...TCCTTCTGTTGTGTCCATATGCTCTGGCTTAGCTCCTGCCATGGCATGGCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS TCA 90 bp | AACTCGTCCTCAGTCAGCAGCAGGTCTGCAGGAGGATTGTCTGCCTaGTACCATCGGTCTCTGAGGTTCCCAAGGACTTCCTGTGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NSSSVSSRSAGGLSA*YHRSLRFPRTSCVS Trigger: GGAGACACAGGAAGTCCTTGGGAACCTCAGAGACCGATGGTATCAGGCAGACAATCCTCCTGCAGACCTGCTGCTGACTGAGGACGAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS TCA 90 bp | GACCATGAACTTGAGCATGCCCCGGCTGTGCTCAGGGTGAAGGAATaGAAGGAACTCGTCCTCAGTCAGCAGCAGGTCTGCAGGAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: DHELEHAPAVLRVKE*KELVLSQQQVCRRI Trigger: AATCCTCCTGCAGACCTGCTGCTGACTGAGGACGAGTTCCTTTCATTCCTTCACCCTGAGCACAGCCGGGGCATGCTCAAGTTCATGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS-3UTR CAA 90 bp | CTGGGCCATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACACAACAGAAGGAGCCCTGAAGTGCAGTTaGTTTTCCTTGACGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LGHAMAGAKPEHMDTTEGALKCS*FSLTAS Trigger: GGAGGCCGTCAAGGAAAACAAACTGCACTTCAGGGC...TCCTTCTGTTGTGTCCATATGCTCTGGCTTAGCTCCTGCCATGGCATGGCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS TCA 90 bp | ATCTCCTTGACCATGAACTTGAGCATGCCCCGGCTGTGCTCAGGGTaGAGGAATGAAAGGAACTCGTCCTCAGTCAGCAGCAGGTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ISLTMNLSMPRLCSG*RNERNSSSVSSRSA Trigger: TGCAGACCTGCTGCTGACTGAGGACGAGTTCCTTTCATTCCTTCACCCTGAGCACAGCCGGGGCATGCTCAAGTTCATGGTCAAGGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS GCA 90 bp | ACGGCCTCCTGGAAGTGCTCTGCTGTTTTCTCCATAATCCAGTGCTaGATCTCCTTAGCGCTGATCCTCCGGTCAGTGTTCACGTCTACC | + |
|
Preference number: 5 (lower is better) Translates to: TASWKCSAVFSIIQC*ISLALILRSVFTST Trigger: GGTAGACGTGAACACTGACCGGAGGATCAGCGCTAAGGAGATGCAGCACTGGATTATGGAGAAAACAGCAGAGCACTTCCAGGAGGCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050078.13 ENSMUST00000097734.11 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS GCA 90 bp | AAGGAACTCGTCCTCAGTCAGCAGCAGGTCTGCAGGAGGATTGTCTaGCTGATACCATCGGTCTCTGAGGTTCCCAAGGACTTCCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: KELVLSQQQVCRRIV*LIPSVSEVPKDFLC Trigger: ACACAGGAAGTCCTTGGGAACCTCAGAGACCGATGGTATCAGGCAGACAATCCTCCTGCAGACCTGCTGCTGACTGAGGACGAGTTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS-3UTR CAA 90 bp | GAGTCACAGATGGATTGCTGTGAGGGCACCAGACTCCCTGAAGCTCTGAAAAGCGCCCTGAAGTGCAGTTaGTTTTCCTTGACGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ESQMDCCEGTRLPEALKSALKCS*FSLTAS Trigger: GGAGGCCGTCAAGGAAAACAAACTGCACTTCAGGGC...GCTTTTCAGAGCTTCAGGGAGTCTGGTGCCCTCACAGCAATCCATCTGTGACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097734.11 |
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| CDS-3UTR CAA 90 bp | CTGGGCCATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACACAACAGAAGGAAAGAACTCACTGTACTaGAGGATCTCCTCGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LGHAMAGAKPEHMDTTEGKNSLY*RISSGS Trigger: GGAGCCCGAGGAGATCCTCAAGTACAGTGAGTTCTT...TCCTTCTGTTGTGTCCATATGCTCTGGCTTAGCTCCTGCCATGGCATGGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS CCA 90 bp | ATCTCATTTTCCTCCCTGTTAGCCGCTCTTTCCCGAGTAGATGAGTaGTTGGCAGGTCTAGCGGTTGCATCCATCAGAAGGACAAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ISFSSLLAALSRVDE*LAGLAVASIRRTRP Trigger: GGGCCTTGTCCTTCTGATGGATGCAACCGCTAGACCTGCCAACCACTCATCTACTCGGGAAAGAGCGGCTAACAGGGAGGAAAATGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050078.13 ENSMUST00000097734.11 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS CCA 90 bp | GGGTCCACAGCCCTGAAGTGCAGTTTGTTTTCCTTGACGGCCTCCTaGAAGTGCTCTGCTGTTTTCTCCATAATCCAGTGCTGCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSTALKCSLFSLTAS*KCSAVFSIIQCCIS Trigger: GGAGATGCAGCACTGGATTATGGAGAAAACAGCAGAGCACTTCCAGGAGGCCGTCAAGGAAAACAAACTGCACTTCAGGGCTGTGGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050078.13 ENSMUST00000097734.11 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS-3UTR CAA 90 bp | CTGGGCCATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACACAACAGAAGGAAGCTCCTCATGGTTCTaGATGGCTTCAGCAATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LGHAMAGAKPEHMDTTEGSSSWF*MASAIS Trigger: GGAGATTGCTGAAGCCATCAAGAACCATGAGGAGCT...TCCTTCTGTTGTGTCCATATGCTCTGGCTTAGCTCCTGCCATGGCATGGCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS TCA 90 bp | CATCCATGTCCTTTCCCAGGAAAACCTCCTGATGGAAGTCCTTGTTaGGGTGTCCATCCATCTCCAGCTTCACCCCATTCAGGTGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HPCPFPGKPPDGSPC*GVHPSPASPHSGGL Trigger: CAGACCACCTGAATGGGGTGAAGCTGGAGATGGATGGACACCTCAACAAGGACTTCCATCAGGAGGTTTTCCTGGGAAAGGACATGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050078.13 ENSMUST00000097734.11 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS TCA 90 bp | TCACCAGAGGAACAGGACAAGGGCCCTCCAGTAAGCAGCAGGAAATaGAGCGCAATCTCCTCATCCACTTTGAGCTCCTCATGGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SPEEQDKGPPVSSRK*SAISSSTLSSSWFL Trigger: CAAGAACCATGAGGAGCTCAAAGTGGATGAGGAGATTGCGCTTCATTTCCTGCTGCTTACTGGAGGGCCCTTGTCCTGTTCCTCTGGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097734.11 |
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| CDS CCA 90 bp | CCGGTGAAGAACTCACTGTACTTGAGGATCTCCTCGGGCTCCAGGTaGTGGTTCTGGTTCTCATCAGCAATGGCAATCATCTGTTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PVKNSLYLRISSGSR*WFWFSSAMAIICLA Trigger: AGCCAAACAGATGATTGCCATTGCTGATGAGAACCAGAACCACCACCTGGAGCCCGAGGAGATCCTCAAGTACAGTGAGTTCTTCACCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS-3UTR CAA 90 bp | GCAGCTCAGCTCATGACTGGTACAGAAGGGCTACTGCCTCAGACACATGCTGGAGTGTTCACGTCTACCTaGGAAAAGATGACCATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AAQLMTGTEGLLPQTHAGVFTST*EKMTIS Trigger: GCTGATGGTCATCTTTTCCAAGGTAGACGTGAACAC...TCCAGCATGTGTCTGAGGCAGTAGCCCTTCTGTACCAGTCATGAGCTGAGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 |
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| CDS-3UTR CAA 90 bp | TCTTTAATAAACCTGGGCCATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACGCCCTGAAGTGCAGTTaGTTTTCCTTGACGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLINLGHAMAGAKPEHMDALKCS*FSLTAS Trigger: GGAGGCCGTCAAGGAAAACAAACTGCACTTCAGGGC...GTCCATATGCTCTGGCTTAGCTCCTGCCATGGCATGGCCCAGGTTTATTAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS-3UTR CAA 90 bp | TGCAGCTCAGCTCATGACTGGTACAGAAGGGCTACTGCCTCAGACACATGCTGGGCAATCTCCCTTTCATaGTGGCCTTTGCTTGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: CSSAHDWYRRATASDTCWAISLS*WPLLAK Trigger: TTTGGCAAGCAAAGGCCACAATGAAAGGGAGATTGC...CCAGCATGTGTCTGAGGCAGTAGCCCTTCTGTACCAGTCATGAGCTGAGCTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 |
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| CDS-3UTR CAA 90 bp | ATCCCAAAGGAGTCACAGATGGATTGCTGTGAGGGCACCAGACTCCCTGAAGCTAGCTCCTCATGGTTCTaGATGGCTTCAGCAATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IPKESQMDCCEGTRLPEASSSWF*MASAIS Trigger: GGAGATTGCTGAAGCCATCAAGAACCATGAGGAGCT...AGCTTCAGGGAGTCTGGTGCCCTCACAGCAATCCATCTGTGACTCCTTTGGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097734.11 |
||
| CDS-3UTR CAA 90 bp | GGACTCAGGGTAGATAGCATTTTAGACCCAATCTGGACCCAGCCATCCACAGGTAAGAACTCACTGTACTaGAGGATCTCCTCGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GLRVDSILDPIWTQPSTGKNSLY*RISSGS Trigger: GGAGCCCGAGGAGATCCTCAAGTACAGTGAGTTCTT...ACCTGTGGATGGCTGGGTCCAGATTGGGTCTAAAATGCTATCTACCCTGAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS TCA 90 bp | CATGATCTCATTTTCCTCCCTGTTAGCCGCTCTTTCCCGAGTAGATaGGTGGTTGGCAGGTCTAGCGGTTGCATCCATCAGAAGGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: HDLIFLPVSRSFPSR*VVGRSSGCIHQKDK Trigger: CTTGTCCTTCTGATGGATGCAACCGCTAGACCTGCCAACCACTCATCTACTCGGGAAAGAGCGGCTAACAGGGAGGAAAATGAGATCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050078.13 ENSMUST00000097734.11 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS TCA 90 bp | CTTGGAAAAGATGACCATCAGCTTCCTCCGGCTTCTCCGTGGCTCTaGGTCTTCATCAAACCCATCCATGTCCTTTCCCAGGAAAACCTC | + |
|
Preference number: 5 (lower is better) Translates to: LGKDDHQLPPASPWL*VFIKPIHVLSQENL Trigger: GAGGTTTTCCTGGGAAAGGACATGGATGGGTTTGATGAAGACTCAGAGCCACGGAGAAGCCGGAGGAAGCTGATGGTCATCTTTTCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050078.13 ENSMUST00000097734.11 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS GCA 90 bp | ACAGCCCTGAAGTGCAGTTTGTTTTCCTTGACGGCCTCCTGGAAGTaGTCTGCTGTTTTCTCCATAATCCAGTGCTGCATCTCCTTAGCG | + |
|
Preference number: 5 (lower is better) Translates to: TALKCSLFSLTASWK*SAVFSIIQCCISLA Trigger: CGCTAAGGAGATGCAGCACTGGATTATGGAGAAAACAGCAGAGCACTTCCAGGAGGCCGTCAAGGAAAACAAACTGCACTTCAGGGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050078.13 ENSMUST00000097734.11 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS CCA 90 bp | AACTCACTGTACTTGAGGATCTCCTCGGGCTCCAGGTGGTGGTTCTaGTTCTCATCAGCAATGGCAATCATCTGTTTGGCTTCGTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NSLYLRISSGSRWWF*FSSAMAIICLASLR Trigger: CCTCAACGAAGCCAAACAGATGATTGCCATTGCTGATGAGAACCAGAACCACCACCTGGAGCCCGAGGAGATCCTCAAGTACAGTGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS CCA 90 bp | GTGAAGAACTCACTGTACTTGAGGATCTCCTCGGGCTCCAGGTGGTaGTTCTGGTTCTCATCAGCAATGGCAATCATCTGTTTGGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: VKNSLYLRISSGSRW*FWFSSAMAIICLAS Trigger: CGAAGCCAAACAGATGATTGCCATTGCTGATGAGAACCAGAACCACCACCTGGAGCCCGAGGAGATCCTCAAGTACAGTGAGTTCTTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTAATAAACCTGGGCCATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACTGCAGTTTGTTTTCCTaGACGGCCTCCTGGAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SLINLGHAMAGAKPEHMDCSLFS*TASWKC Trigger: GCACTTCCAGGAGGCCGTCAAGGAAAACAAACTGCA...GTCCATATGCTCTGGCTTAGCTCCTGCCATGGCATGGCCCAGGTTTATTAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR CAA 90 bp | GGCTACTGCCTCAGACACATGCTGGAGAGGACACATAGCCTATTAAGCATATCTGCCCTGAAGTGCAGTTaGTTTTCCTTGACGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GYCLRHMLERTHSLLSISALKCS*FSLTAS Trigger: GGAGGCCGTCAAGGAAAACAAACTGCACTTCAGGGC...AGATATGCTTAATAGGCTATGTGTCCTCTCCAGCATGTGTCTGAGGCAGTAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 |
||
| CDS-3UTR CAA 90 bp | ATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACACAACAGAAGGAGGAGGTTAGCTCCTCATGGTTCTaGATGGCTTCAGCAATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: MPWQELSQSIWTQQKEEVSSSWF*MASAIS Trigger: GGAGATTGCTGAAGCCATCAAGAACCATGAGGAGCT...AACCTCCTCCTTCTGTTGTGTCCATATGCTCTGGCTTAGCTCCTGCCATGGCAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR CAA 90 bp | ATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACACAACAGAAGGAGGAGGTTGTCTCCTCATCCACTTaGAGCTCCTCATGGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: MPWQELSQSIWTQQKEEVVSSST*SSSWFL Trigger: CAAGAACCATGAGGAGCTCAAAGTGGATGAGGAGAC...AACCTCCTCCTTCTGTTGTGTCCATATGCTCTGGCTTAGCTCCTGCCATGGCAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR CAA 90 bp | CCTATGGAAGCCTCCGGACTCAGGGTAGATAGCATTTTAGACCCAATCTGGACCGTCTCCTCATCCACTTaGAGCTCCTCATGGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PMEASGLRVDSILDPIWTVSSST*SSSWFL Trigger: CAAGAACCATGAGGAGCTCAAAGTGGATGAGGAGAC...GGTCCAGATTGGGTCTAAAATGCTATCTACCCTGAGTCCGGAGGCTTCCATAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS TCA 90 bp | GAGTCTTCATCAAACCCATCCATGTCCTTTCCCAGGAAAACCTCCTaGTGGAAGTCCTTGTTGAGGTGTCCATCCATCTCCAGCTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: ESSSNPSMSFPRKTS*WKSLLRCPSISSFT Trigger: GGTGAAGCTGGAGATGGATGGACACCTCAACAAGGACTTCCATCAGGAGGTTTTCCTGGGAAAGGACATGGATGGGTTTGATGAAGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050078.13 ENSMUST00000097734.11 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS GCA 90 bp | CCTGAAGTGCAGTTTGTTTTCCTTGACGGCCTCCTGGAAGTGCTCTaGTGTTTTCTCCATAATCCAGTGCTGCATCTCCTTAGCGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: PEVQFVFLDGLLEVL*CFLHNPVLHLLSAD Trigger: ATCAGCGCTAAGGAGATGCAGCACTGGATTATGGAGAAAACAGCAGAGCACTTCCAGGAGGCCGTCAAGGAAAACAAACTGCACTTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050078.13 ENSMUST00000097734.11 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR CAA 90 bp | ATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACACAACAGAAGGAGGAGGTTGCAATCTCCCTTTCATaGTGGCCTTTGCTTGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: MPWQELSQSIWTQQKEEVAISLS*WPLLAK Trigger: TTTGGCAAGCAAAGGCCACAATGAAAGGGAGATTGC...AACCTCCTCCTTCTGTTGTGTCCATATGCTCTGGCTTAGCTCCTGCCATGGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR CAA 90 bp | GTAGATAGCATTTTAGACCCAATCTGGACCCAGCCATCCACAGGTCTCACTGGAAGCTCCTCATGGTTCTaGATGGCTTCAGCAATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VDSILDPIWTQPSTGLTGSSSWF*MASAIS Trigger: GGAGATTGCTGAAGCCATCAAGAACCATGAGGAGCT...TCCAGTGAGACCTGTGGATGGCTGGGTCCAGATTGGGTCTAAAATGCTATCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR CAA 90 bp | ACTCATCCCTTCAGTTCAAGGGATCTAAAGCAACTCCCACAGGGTGCTGCCCCTATCAATGTCTTGGCCTaGTTGGTTCTCAACAGTACC | + |
|
Preference number: 5 (lower is better) Translates to: THPFSSRDLKQLPQGAAPINVLA*LVLNST Trigger: GGTACTGTTGAGAACCAACAAGGCCAAGACATTGAT...AGGGGCAGCACCCTGTGGGAGTTGCTTTAGATCCCTTGAACTGAAGGGATGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| CDS-3UTR CAA 90 bp | CAGATGGATTGCTGTGAGGGCACCAGACTCCCTGAAGCTCTGAAAAGCATCTTCATCTCCTCATCCACTTaGAGCTCCTCATGGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QMDCCEGTRLPEALKSIFISSST*SSSWFL Trigger: CAAGAACCATGAGGAGCTCAAAGTGGATGAGGAGAT...GAAGATGCTTTTCAGAGCTTCAGGGAGTCTGGTGCCCTCACAGCAATCCATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097734.11 |
||
| CDS CCA 90 bp | TTCCCAAGGACTTCCTGTGTCTCCTCATCCACTTTGAGCTCCTCATaGTTCTTGATGGCTTCAGCAATCTCCCTTTCATTGTGGCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: FPRTSCVSSSTLSSS*FLMASAISLSLWPL Trigger: CAAAGGCCACAATGAAAGGGAGATTGCTGAAGCCATCAAGAACCATGAGGAGCTCAAAGTGGATGAGGAGACACAGGAAGTCCTTGGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR CAA 90 bp | GTAGATAGCATTTTAGACCCAATCTGGACCCAGCCATCCACAGGTCTCACTGGAGTGTTCACGTCTACCTaGGAAAAGATGACCATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VDSILDPIWTQPSTGLTGVFTST*EKMTIS Trigger: GCTGATGGTCATCTTTTCCAAGGTAGACGTGAACAC...TCCAGTGAGACCTGTGGATGGCTGGGTCCAGATTGGGTCTAAAATGCTATCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTAATAAACCTGGGCCATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACGCAATCTCCCTTTCATaGTGGCCTTTGCTTGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SLINLGHAMAGAKPEHMDAISLS*WPLLAK Trigger: TTTGGCAAGCAAAGGCCACAATGAAAGGGAGATTGC...GTCCATATGCTCTGGCTTAGCTCCTGCCATGGCATGGCCCAGGTTTATTAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR CAA 90 bp | ATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACACAACAGAAGGAGGAGGTTATCAATGTCTTGGCCTaGTTGGTTCTCAACAGTACC | + |
|
Preference number: 5 (lower is better) Translates to: MPWQELSQSIWTQQKEEVINVLA*LVLNST Trigger: GGTACTGTTGAGAACCAACAAGGCCAAGACATTGAT...AACCTCCTCCTTCTGTTGTGTCCATATGCTCTGGCTTAGCTCCTGCCATGGCAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR CAA 90 bp | CCTATGGAAGCCTCCGGACTCAGGGTAGATAGCATTTTAGACCCAATCTGGACCATCAATGTCTTGGCCTaGTTGGTTCTCAACAGTACC | + |
|
Preference number: 5 (lower is better) Translates to: PMEASGLRVDSILDPIWTINVLA*LVLNST Trigger: GGTACTGTTGAGAACCAACAAGGCCAAGACATTGAT...GGTCCAGATTGGGTCTAAAATGCTATCTACCCTGAGTCCGGAGGCTTCCATAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR CAA 90 bp | CTGGATGTGTCCTTCATTCCTAGAATCCCCTGCAGAGGATCTGTACAGGACAGCGTTGTCATCAATGTCTaGGCCTTGTTGGTTCTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LDVSFIPRIPCRGSVQDSVVINV*ALLVLN Trigger: GTTGAGAACCAACAAGGCCAAGACATTGATGACAAC...GCTGTCCTGTACAGATCCTCTGCAGGGGATTCTAGGAATGAAGGACACATCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| CDS-3UTR CAA 90 bp | ATGCCATGGCAGGAGCTAAGCCAGAGCATATGGACACAACAGAAGGAGGAGGTTGTTGTCATCAATGTCTaGGCCTTGTTGGTTCTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: MPWQELSQSIWTQQKEEVVVINV*ALLVLN Trigger: GTTGAGAACCAACAAGGCCAAGACATTGATGACAAC...AACCTCCTCCTTCTGTTGTGTCCATATGCTCTGGCTTAGCTCCTGCCATGGCAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS CCA 90 bp | TTCTTTCTGTCTTTCACCCAGTTGTCATCAATGTCTTGGCCTTGTTaGTTCTCAACAGTACCCACAGGCAGAGAGATGAACTCGGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FFLSFTQLSSMSWPC*FSTVPTGREMNSGR Trigger: TCTGCCCGAGTTCATCTCTCTGCCTGTGGGTACTGTTGAGAACCAACAAGGCCAAGACATTGATGACAACTGGGTGAAAGACAGAAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR CAA 90 bp | TGCCTCAGACACATGCTGGAGAGGACACATAGCCTATTAAGCATATCTTTAATATCCTTGACCATGAACTaGAGCATGCCCCGGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: CLRHMLERTHSLLSISLISLTMN*SMPRLC Trigger: GCACAGCCGGGGCATGCTCAAGTTCATGGTCAAGGA...TATTAAAGATATGCTTAATAGGCTATGTGTCCTCTCCAGCATGTGTCTGAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 |
||
| CDS TCA 90 bp | GGTTCTGGTTCTCATCAGCAATGGCAATCATCTGTTTGGCTTCGTTaGGGGCATTGTATTCATTCATGGGGTCCATGTAGTTCTCTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GSGSHQQWQSSVWLR*GHCIHSWGPCSSLA Trigger: AGCTAGAGAACTACATGGACCCCATGAATGAATACAATGCCCTCAACGAAGCCAAACAGATGATTGCCATTGCTGATGAGAACCAGAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS-3UTR CAA 90 bp | AGGGTTTATTCCCACATCACTGTTCATCACCAGAGTAAAATGGCCACAGTGAGAGTGTTCACGTCTACCTaGGAAAAGATGACCATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RVYSHITVHHQSKMATVRVFTST*EKMTIS Trigger: GCTGATGGTCATCTTTTCCAAGGTAGACGTGAACAC...TCTCACTGTGGCCATTTTACTCTGGTGATGAACAGTGATGTGGGAATAAACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097734.11 |
||
| CDS-3UTR CAA 90 bp | GGAATGAAAGGGTTTATTCCCACATCACTGTTCATCACCAGAGTAAAATGGCCAGCAATCTCCCTTTCATaGTGGCCTTTGCTTGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GMKGFIPTSLFITRVKWPAISLS*WPLLAK Trigger: TTTGGCAAGCAAAGGCCACAATGAAAGGGAGATTGC...TGGCCATTTTACTCTGGTGATGAACAGTGATGTGGGAATAAACCCTTTCATTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097734.11 |
||
| CDS-3UTR CAA 90 bp | AAGAGATTTATTTTTAACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTTGGAAGAACTCACTGTACTaGAGGATCTCCTCGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KRFIFNSVCVCVCVCVCWKNSLY*RISSGS Trigger: GGAGCCCGAGGAGATCCTCAAGTACAGTGAGTTCTT...CCAACATACACACACACACACACACACACACACAGAGTTAAAAATAAATCTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050078.13 |
||
| CDS-3UTR CAA 90 bp | CAGAATTTAACAACTGAAAAGAGATTTGGTCAAGCAAATGCAGCTCAGCTCATGGTGTTCACGTCTACCTaGGAAAAGATGACCATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QNLTTEKRFGQANAAQLMVFTST*EKMTIS Trigger: GCTGATGGTCATCTTTTCCAAGGTAGACGTGAACAC...CATGAGCTGAGCTGCATTTGCTTGACCAAATCTCTTTTCAGTTGTTAAATTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 |
||
| CDS TCA 72 bp | TCCATCAGAAGGACAAGGCCCAAGAACCAGAGGCCATaGGCAGCTAGACCACAGAGGGAACTCTGCCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SIRRTRPKNQRP*AARPQRELCLG Trigger: GCCCAGGCAGAGTTCCCTCTGTGGTCTAGCTGCTCATGGCCTCTGGTTCTTGGGCCTTGTCCTTCTGATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050078.13 ENSMUST00000097734.11 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS GCA 72 bp | ACATGGCCGTCACCGTCAGGGTCCACAGCCCTGAAGTaGAGTTTGTTTTCCTTGACGGCCTCCTGGAAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: TWPSPSGSTALK*SLFSLTASWKC Trigger: GCACTTCCAGGAGGCCGTCAAGGAAAACAAACTGCACTTCAGGGCTGTGGACCCTGACGGTGACGGCCATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050078.13 ENSMUST00000097734.11 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS CAA 72 bp | CCGTCACCGTCAGGGTCCACAGCCCTGAAGTGCAGTTaGTTTTCCTTGACGGCCTCCTGGAAGTGCTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PSPSGSTALKCS*FSLTASWKCSA Trigger: AGCAGAGCACTTCCAGGAGGCCGTCAAGGAAAACAAACTGCACTTCAGGGCTGTGGACCCTGACGGTGACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050078.13 ENSMUST00000097734.11 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS GCA 72 bp | GTCCTCAGTCAGCAGCAGGTCTGCAGGAGGATTGTCTaGCTGATACCATCGGTCTCTGAGGTTCCCAAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: VLSQQQVCRRIV*LIPSVSEVPKD Trigger: GTCCTTGGGAACCTCAGAGACCGATGGTATCAGGCAGACAATCCTCCTGCAGACCTGCTGCTGACTGAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS TCA 72 bp | TCCTCCGGTCAGTGTTCACGTCTACCTTGGAAAAGATaGCCATCAGCTTCCTCCGGCTTCTCCGTGGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSGQCSRLPWKR*PSASSGFSVAL Trigger: CAGAGCCACGGAGAAGCCGGAGGAAGCTGATGGTCATCTTTTCCAAGGTAGACGTGAACACTGACCGGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050078.13 ENSMUST00000097734.11 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS TCA 72 bp | TCAGTCAGCAGCAGGTCTGCAGGAGGATTGTCTGCCTaGTACCATCGGTCTCTGAGGTTCCCAAGGACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SVSSRSAGGLSA*YHRSLRFPRTS Trigger: GGAAGTCCTTGGGAACCTCAGAGACCGATGGTATCAGGCAGACAATCCTCCTGCAGACCTGCTGCTGACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS CCA 72 bp | TCCTCCCTGTTAGCCGCTCTTTCCCGAGTAGATGAGTaGTTGGCAGGTCTAGCGGTTGCATCCATCAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSLLAALSRVDE*LAGLAVASIRR Trigger: CCTTCTGATGGATGCAACCGCTAGACCTGCCAACCACTCATCTACTCGGGAAAGAGCGGCTAACAGGGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050078.13 ENSMUST00000097734.11 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS CAA 90 bp | CCGTCACCGTCAGGGTCCACAGCCCTGAAGTGCAGTTTGTTTTCCTaGACGGCCTCCTGGAAGTGCTCTGCTGTTTTCTCCATAATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PSPSGSTALKCSLFS*TASWKCSAVFSIIQ Trigger: CTGGATTATGGAGAAAACAGCAGAGCACTTCCAGGAGGCCGTCAAGGAAAACAAACTGCACTTCAGGGCTGTGGACCCTGACGGTGACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050078.13 ENSMUST00000097734.11 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS TCA 72 bp | GATGACCATCAGCTTCCTCCGGCTTCTCCGTGGCTCTaGGTCTTCATCAAACCCATCCATGTCCTTTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: DDHQLPPASPWL*VFIKPIHVLSQ Trigger: CTGGGAAAGGACATGGATGGGTTTGATGAAGACTCAGAGCCACGGAGAAGCCGGAGGAAGCTGATGGTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050078.13 ENSMUST00000097734.11 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS CAA 72 bp | TCCCTGTTAGCCGCTCTTTCCCGAGTAGATGAGTGGTaGGCAGGTCTAGCGGTTGCATCCATCAGAAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: SLLAALSRVDEW*AGLAVASIRRT Trigger: TGTCCTTCTGATGGATGCAACCGCTAGACCTGCCAACCACTCATCTACTCGGGAAAGAGCGGCTAACAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050078.13 ENSMUST00000097734.11 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS CAA 72 bp | TCAGGGTCCACAGCCCTGAAGTGCAGTTTGTTTTCCTaGACGGCCTCCTGGAAGTGCTCTGCTGTTTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SGSTALKCSLFS*TASWKCSAVFS Trigger: GGAGAAAACAGCAGAGCACTTCCAGGAGGCCGTCAAGGAAAACAAACTGCACTTCAGGGCTGTGGACCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050078.13 ENSMUST00000097734.11 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS CAA 90 bp | TCATTTTCCTCCCTGTTAGCCGCTCTTTCCCGAGTAGATGAGTGGTaGGCAGGTCTAGCGGTTGCATCCATCAGAAGGACAAGGCCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SFSSLLAALSRVDEW*AGLAVASIRRTRPK Trigger: CTTGGGCCTTGTCCTTCTGATGGATGCAACCGCTAGACCTGCCAACCACTCATCTACTCGGGAAAGAGCGGCTAACAGGGAGGAAAATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050078.13 ENSMUST00000097734.11 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS GCA 72 bp | TCCTGGAAGTGCTCTGCTGTTTTCTCCATAATCCAGTaGTGCATCTCCTTAGCGCTGATCCTCCGGTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SWKCSAVFSIIQ*CISLALILRSV Trigger: CACTGACCGGAGGATCAGCGCTAAGGAGATGCAGCACTGGATTATGGAGAAAACAGCAGAGCACTTCCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050078.13 ENSMUST00000097734.11 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS CAA 90 bp | CGGTCTCTGAGGTTCCCAAGGACTTCCTGTGTCTCCTCATCCACTTaGAGCTCCTCATGGTTCTTGATGGCTTCAGCAATCTCCCTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RSLRFPRTSCVSSST*SSSWFLMASAISLS Trigger: TGAAAGGGAGATTGCTGAAGCCATCAAGAACCATGAGGAGCTCAAAGTGGATGAGGAGACACAGGAAGTCCTTGGGAACCTCAGAGACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS CCA 72 bp | GCCAAAAACTTCACTTTATATTCATCCCAGGAAACATaGCCGTCACCGTCAGGGTCCACAGCCCTGAAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: AKNFTLYSSQET*PSPSGSTALKC Trigger: GCACTTCAGGGCTGTGGACCCTGACGGTGACGGCCATGTTTCCTGGGATGAATATAAAGTGAAGTTTTTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000050078.13 ENSMUST00000097734.11 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS CCA 72 bp | TACTTGAGGATCTCCTCGGGCTCCAGGTGGTGGTTCTaGTTCTCATCAGCAATGGCAATCATCTGTTTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: YLRISSGSRWWF*FSSAMAIICLA Trigger: AGCCAAACAGATGATTGCCATTGCTGATGAGAACCAGAACCACCACCTGGAGCCCGAGGAGATCCTCAAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
||
| CDS CAA 90 bp | AGGACTTCCTGTGTCTCCTCATCCACTTTGAGCTCCTCATGGTTCTaGATGGCTTCAGCAATCTCCCTTTCATTGTGGCCTTTGCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: RTSCVSSSTLSSSWF*MASAISLSLWPLLA Trigger: GGCAAGCAAAGGCCACAATGAAAGGGAGATTGCTGAAGCCATCAAGAACCATGAGGAGCTCAAAGTGGATGAGGAGACACAGGAAGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS TCA 72 bp | TCAAACCCATCCATGTCCTTTCCCAGGAAAACCTCCTaGTGGAAGTCCTTGTTGAGGTGTCCATCCATCTCC | + |
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Preference number: 6 (lower is better) Translates to: SNPSMSFPRKTS*WKSLLRCPSIS Trigger: GGAGATGGATGGACACCTCAACAAGGACTTCCATCAGGAGGTTTTCCTGGGAAAGGACATGGATGGGTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050078.13 ENSMUST00000097734.11 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS CAA 90 bp | CTTCTTTCTGTCTTTCACCCAGTTGTCATCAATGTCTTGGCCTTGTaGGTTCTCAACAGTACCCACAGGCAGAGAGATGAACTCGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: LLSVFHPVVINVLAL*VLNSTHRQRDELGQ Trigger: CTGCCCGAGTTCATCTCTCTGCCTGTGGGTACTGTTGAGAACCAACAAGGCCAAGACATTGATGACAACTGGGTGAAAGACAGAAAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS CAA 90 bp | CTCCTTCTTTCTGTCTTTCACCCAGTTGTCATCAATGTCTTGGCCTaGTTGGTTCTCAACAGTACCCACAGGCAGAGAGATGAACTCGGG | + |
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Preference number: 6 (lower is better) Translates to: LLLSVFHPVVINVLA*LVLNSTHRQRDELG Trigger: CCCGAGTTCATCTCTCTGCCTGTGGGTACTGTTGAGAACCAACAAGGCCAAGACATTGATGACAACTGGGTGAAAGACAGAAAGAAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS TCA 72 bp | CTTGTTGGTTCTCAACAGTACCCACAGGCAGAGAGATaGACTCGGGCAGAGATAACTGCTTATCACCATCCT | + |
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Preference number: 6 (lower is better) Translates to: LVGSQQYPQAER*TRAEITAYHHP Trigger: AGGATGGTGATAAGCAGTTATCTCTGCCCGAGTTCATCTCTCTGCCTGTGGGTACTGTTGAGAACCAACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS GCA 72 bp | AAGTGCAGTTTGTTTTCCTTGACGGCCTCCTGGAAGTaGTCTGCTGTTTTCTCCATAATCCAGTGCTGCATC | + |
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Preference number: 6 (lower is better) Translates to: KCSLFSLTASWK*SAVFSIIQCCI Trigger: GATGCAGCACTGGATTATGGAGAAAACAGCAGAGCACTTCCAGGAGGCCGTCAAGGAAAACAAACTGCACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050078.13 ENSMUST00000097734.11 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS CAA 72 bp | TGTGTCTCCTCATCCACTTTGAGCTCCTCATGGTTCTaGATGGCTTCAGCAATCTCCCTTTCATTGTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: CVSSSTLSSSWF*MASAISLSLWP Trigger: AGGCCACAATGAAAGGGAGATTGCTGAAGCCATCAAGAACCATGAGGAGCTCAAAGTGGATGAGGAGACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS CAA 72 bp | GCAATCTCCTCATCCACTTTGAGCTCCTCATGGTTCTaGATGGCTTCAGCAATCTCCCTTTCATTGTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: AISSSTLSSSWF*MASAISLSLWP Trigger: AGGCCACAATGAAAGGGAGATTGCTGAAGCCATCAAGAACCATGAGGAGCTCAAAGTGGATGAGGAGATTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097734.11 |
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| CDS TCA 72 bp | ATGAACTCGGGCAGAGATAACTGCTTATCACCATCCTaGTCCAAGTCCCGAAAGATCTCCTTGACCATGAAC | + |
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Preference number: 6 (lower is better) Translates to: MNSGRDNCLSPS*SKSRKISLTMN Trigger: GTTCATGGTCAAGGAGATCTTTCGGGACTTGGATCAGGATGGTGATAAGCAGTTATCTCTGCCCGAGTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS CCA 72 bp | TCTTTCACCCAGTTGTCATCAATGTCTTGGCCTTGTTaGTTCTCAACAGTACCCACAGGCAGAGAGATGAAC | + |
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Preference number: 6 (lower is better) Translates to: SFTQLSSMSWPC*FSTVPTGREMN Trigger: GTTCATCTCTCTGCCTGTGGGTACTGTTGAGAACCAACAAGGCCAAGACATTGATGACAACTGGGTGAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS CAA 72 bp | GTCTTTCACCCAGTTGTCATCAATGTCTTGGCCTTGTaGGTTCTCAACAGTACCCACAGGCAGAGAGATGAA | + |
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Preference number: 6 (lower is better) Translates to: VFHPVVINVLAL*VLNSTHRQRDE Trigger: TTCATCTCTCTGCCTGTGGGTACTGTTGAGAACCAACAAGGCCAAGACATTGATGACAACTGGGTGAAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS CAA 72 bp | TCTGTCTTTCACCCAGTTGTCATCAATGTCTTGGCCTaGTTGGTTCTCAACAGTACCCACAGGCAGAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: SVFHPVVINVLA*LVLNSTHRQRD Trigger: ATCTCTCTGCCTGTGGGTACTGTTGAGAACCAACAAGGCCAAGACATTGATGACAACTGGGTGAAAGACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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| CDS CAA 72 bp | TGGTTCTGGTTCTCATCAGCAATGGCAATCATCTGTTaGGCTTCGTTGAGGGCATTGTATTCATTCATGGGG | + |
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Preference number: 6 (lower is better) Translates to: WFWFSSAMAIIC*ASLRALYSFMG Trigger: CCCCATGAATGAATACAATGCCCTCAACGAAGCCAAACAGATGATTGCCATTGCTGATGAGAACCAGAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050078.13 ENSMUST00000105578.2 ENSMUST00000105579.8 |
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