Pregenerated sensors for SDE2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038806Ensembl transcript IDs: ENSMUST00000038091.8
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTGACAAAGCAGGCACAGCAGCTCATGCGAGACAGGAGGATCACTaGAAGTTTGAGACCAAAGTGAACCACACAGTTCTTGGTCAGTCT | + |
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Preference number: 1 (lower is better) Translates to: SDKAGTAAHARQEDH*KFETKVNHTVLGQS Trigger: AGACTGACCAAGAACTGTGTGGTTCACTTTGGTCTCAAACTTGCAGTGATCCTCCTGTCTCGCATGAGCTGCTGTGCCTGCTTTGTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| 3UTR GCA 90 bp | AGTGATGATGATGACAAGAAGTCAGACACAGATGCGAGACACACCTaGTGTGTGTTAGACAGGAGGAGCAAGGAGAGAGGAACAGAAAAC | + |
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Preference number: 1 (lower is better) Translates to: SDDDDKKSDTDARHT*CVLDRRSKERGTEN Trigger: GTTTTCTGTTCCTCTCTCCTTGCTCCTCCTGTCTAACACACAGCAGGTGTGTCTCGCATCTGTGTCTGACTTCTTGTCATCATCATCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| 3UTR TCA 90 bp | CCCCAAAGAAAATGTTATGACCGAAACAACCATGTGACTCACTGCTaGCCTGTCATCAGAGACAGGGACCAGATGAAGATGATGACAATG | + |
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Preference number: 1 (lower is better) Translates to: PQRKCYDRNNHVTHC*PVIRDRDQMKMMTM Trigger: CATTGTCATCATCTTCATCTGGTCCCTGTCTCTGATGACAGGTCAGCAGTGAGTCACATGGTTGTTTCGGTCATAACATTTTCTTTGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| 3UTR TCA 90 bp | ACTCAAGTGACACAGTATATAAAGCCAAAGAAATGTATAAACCTCTaGCAAAGCAGGCACAGCAGCTCATGCGAGACAGGAGGATCACTG | + |
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Preference number: 1 (lower is better) Translates to: TQVTQYIKPKKCINL*QSRHSSSCETGGSL Trigger: CAGTGATCCTCCTGTCTCGCATGAGCTGCTGTGCCTGCTTTGTCAGAGGTTTATACATTTCTTTGGCTTTATATACTGTGTCACTTGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| 3UTR TCA 90 bp | CTATCCTGGGTCAGTCACAACAAGGATGCCAGGTACTTTCTGTCCTaGATAGTCAGAGAGTCACTATCAATAAAACATTTACAGAAAACA | + |
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Preference number: 1 (lower is better) Translates to: LSWVSHNKDARYFLS*IVRESLSIKHLQKT Trigger: TGTTTTCTGTAAATGTTTTATTGATAGTGACTCTCTGACTATTCAGGACAGAAAGTACCTGGCATCCTTGTTGTGACTGACCCAGGATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| 3UTR-3UTR TCA 90 bp | CCACCCTGCTGCCGGCTGATGGTACGTTCTTTCCAACACACACAGCACAGATCACTGTGTCTACAAACCTaGCTGCTTTGGGTTATACAA | + |
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Preference number: 2 (lower is better) Translates to: PPCCRLMVRSFQHTQHRSLCLQT*LLWVIQ Trigger: TTGTATAACCCAAAGCAGTCAGGTTTGTAGACACAG...TGATCTGTGCTGTGTGTGTTGGAAAGAACGTACCATCAGCCGGCAGCAGGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGGAACTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCGGTCTCTCCAGCCAAGTTCAGGTACCACTaGAAAGAGACTAGTTTGAAA | + |
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Preference number: 2 (lower is better) Translates to: LGTELRTFGRAVSAVSPAKFRYH*KETSLK Trigger: TTTCAAACTAGTCTCTTTTCAGTGGTACCTGAACTT...GGCTGGAGAGACCGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAGTTCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| 3UTR-3UTR TCA 90 bp | CTGATGGTACGTTCTTTCCAACACACACAGCACAGATCATGTCAGACCCTATCCAGTTTGAGACCAAAGTaGACCACACAGTTCTTGGTC | + |
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Preference number: 2 (lower is better) Translates to: LMVRSFQHTQHRSCQTLSSLRPK*TTQFLV Trigger: GACCAAGAACTGTGTGGTTCACTTTGGTCTCAAACT...GGATAGGGTCTGACATGATCTGTGCTGTGTGTGTTGGAAAGAACGTACCATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| 3UTR-3UTR TCA 90 bp | CTGATGGTACGTTCTTTCCAACACACACAGCACAGATCATGTCAGACCCTATCCAGGTACTTTCTGTCCTaGATAGTCAGAGAGTCACTA | + |
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Preference number: 2 (lower is better) Translates to: LMVRSFQHTQHRSCQTLSRYFLS*IVRESL Trigger: TAGTGACTCTCTGACTATTCAGGACAGAAAGTACCT...GGATAGGGTCTGACATGATCTGTGCTGTGTGTGTTGGAAAGAACGTACCATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| 3UTR CCA 72 bp | CCAGTGAGAGGCCTGGAAGCAGCTAGGCTCCATCCCTaGTCTCACACACACACACACACACACACATTCATA | + |
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Preference number: 3 (lower is better) Translates to: PVRGLEAARLHP*SHTHTHTHTFI Trigger: TATGAATGTGTGTGTGTGTGTGTGTGTGTGAGACCAGGGATGGAGCCTAGCTGCTTCCAGGCCTCTCACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| 3UTR TCA 72 bp | CTGATGGTTGTGAGCCATTATGTGGTTGCTGGGAACTaGACTCAGGACCTTTGGAAGAGCAGTCAGTGCGGT | + |
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Preference number: 3 (lower is better) Translates to: LMVVSHYVVAGN*TQDLWKSSQCG Trigger: ACCGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAGTTCCCAGCAACCACATAATGGCTCACAACCATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| 3UTR GCA 72 bp | GCAGGCACAGCAGCTCATGCGAGACAGGAGGATCACTaGAAGTTTGAGACCAAAGTGAACCACACAGTTCTT | + |
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Preference number: 3 (lower is better) Translates to: AGTAAHARQEDH*KFETKVNHTVL Trigger: AAGAACTGTGTGGTTCACTTTGGTCTCAAACTTGCAGTGATCCTCCTGTCTCGCATGAGCTGCTGTGCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| 3UTR GCA 72 bp | GATGACAAGAAGTCAGACACAGATGCGAGACACACCTaGTGTGTGTTAGACAGGAGGAGCAAGGAGAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: DDKKSDTDARHT*CVLDRRSKERG Trigger: TCCTCTCTCCTTGCTCCTCCTGTCTAACACACAGCAGGTGTGTCTCGCATCTGTGTCTGACTTCTTGTCATC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| 3UTR CCA 72 bp | CAACACACACAGCACAGATCATGTCAGACCCTATCCTaGGTCAGTCACAACAAGGATGCCAGGTACTTTCTG | + |
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Preference number: 3 (lower is better) Translates to: QHTQHRSCQTLS*VSHNKDARYFL Trigger: CAGAAAGTACCTGGCATCCTTGTTGTGACTGACCCAGGATAGGGTCTGACATGATCTGTGCTGTGTGTGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| 3UTR TCA 72 bp | CACCCCAAAGAAAATGTTATGACCGAAACAACCATGTaGCTCACTGCTGACCTGTCATCAGAGACAGGGACC | + |
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Preference number: 3 (lower is better) Translates to: HPKENVMTETTM*LTADLSSETGT Trigger: GGTCCCTGTCTCTGATGACAGGTCAGCAGTGAGTCACATGGTTGTTTCGGTCATAACATTTTCTTTGGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| 3UTR GCA 72 bp | ATGTCAGACCCTATCCTGGGTCAGTCACAACAAGGATaGCAGGTACTTTCTGTCCTGAATAGTCAGAGAGTC | + |
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Preference number: 3 (lower is better) Translates to: MSDPILGQSQQG*QVLSVLNSQRV Trigger: GACTCTCTGACTATTCAGGACAGAAAGTACCTGGCATCCTTGTTGTGACTGACCCAGGATAGGGTCTGACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| 3UTR GCA 72 bp | TGTAGCTGTACTGATGGTTGTGAGCCATTATGTGGTTaGTGGGAACTGAACTCAGGACCTTTGGAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: CSCTDGCEPLCG*WELNSGPLEEQ Trigger: CTGCTCTTCCAAAGGTCCTGAGTTCAGTTCCCAGCAACCACATAATGGCTCACAACCATCAGTACAGCTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| 3UTR TCA 72 bp | AAATGTTATGACCGAAACAACCATGTGACTCACTGCTaGCCTGTCATCAGAGACAGGGACCAGATGAAGATG | + |
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Preference number: 3 (lower is better) Translates to: KCYDRNNHVTHC*PVIRDRDQMKM Trigger: CATCTTCATCTGGTCCCTGTCTCTGATGACAGGTCAGCAGTGAGTCACATGGTTGTTTCGGTCATAACATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| 3UTR TCA 72 bp | GTCAGTCACAACAAGGATGCCAGGTACTTTCTGTCCTaGATAGTCAGAGAGTCACTATCAATAAAACATTTA | + |
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Preference number: 3 (lower is better) Translates to: VSHNKDARYFLS*IVRESLSIKHL Trigger: TAAATGTTTTATTGATAGTGACTCTCTGACTATTCAGGACAGAAAGTACCTGGCATCCTTGTTGTGACTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR GCA 90 bp | GGCACAGCAGCTCATGCGAGACAGGAGGATCACTGCAAGTTTGAGACCAAAGTGAGAGAAGAGCCTGGCTaGGCGCTCCTGCAGGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: GTAAHARQEDHCKFETKVREEPG*ALLQGP Trigger: GGGACCCTGCAGGAGCGCGCAGCCAGGCTCTTCTCT...CACTTTGGTCTCAAACTTGCAGTGATCCTCCTGTCTCGCATGAGCTGCTGTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR GCA 90 bp | CTGGGAACTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCGGTCTCTCCAGCCCTCTGTTTCCTTCCTTaGTGGCGTCTCCTCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: LGTELRTFGRAVSAVSPALCFLP*WRLLWV Trigger: GACCCAGAGGAGACGCCAGCAAGGAAGGAAACAGAG...GGCTGGAGAGACCGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAGTTCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR GCA 90 bp | CCACCCTGCTGCCGGCTGATGGTACGTTCTTTCCAACACACACAGCACAGATCAGCCTCTCGCTCAGCTTaGTGTTTTACCCACTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: PPCCRLMVRSFQHTQHRSASRSA*CFTHSA Trigger: GGCTGAGTGGGTAAAACAGCAAGCTGAGCGAGAGGC...TGATCTGTGCTGTGTGTGTTGGAAAGAACGTACCATCAGCCGGCAGCAGGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR GCA 90 bp | CACAGCACAGATCATGTCAGACCCTATCCTGGGTCAGTCACAACAAGGATGCCACTCTCCAGGCGCCTTTaGTCCTTTTCAGCCTCTCGC | + |
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Preference number: 4 (lower is better) Translates to: HSTDHVRPYPGSVTTRMPLSRRL*SFSASR Trigger: GCGAGAGGCTGAAAAGGAGCAAAGGCGCCTGGAGAG...TGGCATCCTTGTTGTGACTGACCCAGGATAGGGTCTGACATGATCTGTGCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR GCA 90 bp | GGCACAGCAGCTCATGCGAGACAGGAGGATCACTGCAAGTTTGAGACCAAAGTGCTGTGTTCTCCAAAATaGCCTGCCCAGGCTCGGTCA | + |
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Preference number: 4 (lower is better) Translates to: GTAAHARQEDHCKFETKVLCSPK*PAQARS Trigger: TGACCGAGCCTGGGCAGGGCATTTTGGAGAACACAG...CACTTTGGTCTCAAACTTGCAGTGATCCTCCTGTCTCGCATGAGCTGCTGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| 3UTR CAA 72 bp | CCATTATGTGGTTGCTGGGAACTGAACTCAGGACCTTaGGAAGAGCAGTCAGTGCGGTCTCTCCAGCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: PLCGCWELNSGP*EEQSVRSLQPR Trigger: TCTGGGCTGGAGAGACCGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAGTTCCCAGCAACCACATAATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR TCA 90 bp | CCACCCTGCTGCCGGCTGATGGTACGTTCTTTCCAACACACACAGCACAGATCATTCCTGGTCCGTTTTTaGCTTGTTAGGCCGTTTCCG | + |
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Preference number: 4 (lower is better) Translates to: PPCCRLMVRSFQHTQHRSFLVRF*LVRPFP Trigger: CGGAAACGGCCTAACAAGTCAAAAACGGACCAGGAA...TGATCTGTGCTGTGTGTGTTGGAAAGAACGTACCATCAGCCGGCAGCAGGGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR TCA 90 bp | CTGGGAACTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCGGTCTCTCCAGCCCTGAAGCTTTTCAGGTaGCTCAGAGTGTGTACCAGA | + |
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Preference number: 4 (lower is better) Translates to: LGTELRTFGRAVSAVSPALKLFR*LRVCTR Trigger: TCTGGTACACACTCTGAGTCACCTGAAAAGCTTCAG...GGCTGGAGAGACCGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAGTTCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR GCA 90 bp | CCACCCTGCTGCCGGCTGATGGTACGTTCTTTCCAACACACACAGCACAGATCACTGCTGATACCATCTTaGTGGATGCAGCCTGCATAC | + |
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Preference number: 4 (lower is better) Translates to: PPCCRLMVRSFQHTQHRSLLIPS*WMQPAY Trigger: GTATGCAGGCTGCATCCAGCAAGATGGTATCAGCAG...TGATCTGTGCTGTGTGTGTTGGAAAGAACGTACCATCAGCCGGCAGCAGGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR GCA 90 bp | GGCACAGCAGCTCATGCGAGACAGGAGGATCACTGCAAGTTTGAGACCAAAGTGCCTCCAGCCCATCCATaGCCAACCAAAAGCATTTCC | + |
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Preference number: 4 (lower is better) Translates to: GTAAHARQEDHCKFETKVPPAHP*PTKSIS Trigger: GGAAATGCTTTTGGTTGGGCATGGATGGGCTGGAGG...CACTTTGGTCTCAAACTTGCAGTGATCCTCCTGTCTCGCATGAGCTGCTGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR CCA 90 bp | CTGGGAACTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCGGTCTCTCCAGCCCTGATACCATCTTGCTaGATGCAGCCTGCATACCTT | + |
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Preference number: 4 (lower is better) Translates to: LGTELRTFGRAVSAVSPALIPSC*MQPAYL Trigger: AAGGTATGCAGGCTGCATCCAGCAAGATGGTATCAG...GGCTGGAGAGACCGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAGTTCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR CCA 90 bp | CCGGCTGATGGTACGTTCTTTCCAACACACACAGCACAGATCATGTCAGACCCTTGCTGGCGTCTCCTCTaGGTCTGTGACTGTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: PADGTFFPTHTAQIMSDPCWRLL*VCDCLP Trigger: AGGAAGACAGTCACAGACCCAGAGGAGACGCCAGCA...AGGGTCTGACATGATCTGTGCTGTGTGTGTTGGAAAGAACGTACCATCAGCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR TCA 90 bp | CTGGGAACTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCGGTCTCTCCAGCCTCGCTTTCTCATGATTaGCATCTCGTAATCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: LGTELRTFGRAVSAVSPASLSHD*HLVISS Trigger: GGAGGAGATTACGAGATGTCAATCATGAGAAAGCGA...GGCTGGAGAGACCGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAGTTCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR TCA 90 bp | CAGCTAGGCTCCATCCCTGGTCTCACACACACACACACACACACACATTCATATCATACCTTTGAGGACTaGGTCCTCCAGACGCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: QLGSIPGLTHTHTHTHSYHTFED*VLQTLS Trigger: GCTGAGCGTCTGGAGGACTCAGTCCTCAAAGGTATG...ATATGAATGTGTGTGTGTGTGTGTGTGTGTGAGACCAGGGATGGAGCCTAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR TCA 90 bp | CAGCTAGGCTCCATCCCTGGTCTCACACACACACACACACACACACATTCATATTCTCCTCTGGGTCTGTaGCTGTCTTCCTCTCGTTGC | + |
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Preference number: 4 (lower is better) Translates to: QLGSIPGLTHTHTHTHSYSPLGL*LSSSRC Trigger: GCAACGAGAGGAAGACAGTCACAGACCCAGAGGAGA...ATATGAATGTGTGTGTGTGTGTGTGTGTGTGAGACCAGGGATGGAGCCTAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR TCA 90 bp | CAGCTAGGCTCCATCCCTGGTCTCACACACACACACACACACACACATTCATATTGCAGAGCTGAATGCTaGCAGATCCACCGCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: QLGSIPGLTHTHTHTHSYCRAEC*QIHRFQ Trigger: CTGGAAGCGGTGGATCTGTCAGCATTCAGCTCTGCA...ATATGAATGTGTGTGTGTGTGTGTGTGTGTGAGACCAGGGATGGAGCCTAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR GCA 90 bp | CTGGGAACTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCGGTCTCTCCAGCCTGTCTTCTCTATCTGTaGACCAAGTGCTCGAAGCAT | + |
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Preference number: 4 (lower is better) Translates to: LGTELRTFGRAVSAVSPACLLYL*TKCSKH Trigger: ATGCTTCGAGCACTTGGTGCACAGATAGAGAAGACA...GGCTGGAGAGACCGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAGTTCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR CCA 90 bp | CACAGCACAGATCATGTCAGACCCTATCCTGGGTCAGTCACAACAAGGATGCCATGTTTCCTTCCTTGCTaGCGTCTCCTCTGGGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: HSTDHVRPYPGSVTTRMPCFLPC*RLLWVC Trigger: ACAGACCCAGAGGAGACGCCAGCAAGGAAGGAAACA...TGGCATCCTTGTTGTGACTGACCCAGGATAGGGTCTGACATGATCTGTGCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR TCA 90 bp | CAAAACCATGAAGTTCACCAAACTCCAGAGCAGAAGAGTAGACATTTAGGCACAGGTAGTCGGGACTGGTaGAGCAGTGTGCAGGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: QNHEVHQTPEQKSRHLGTGSRDW*SSVQAR Trigger: CCGAGCCTGCACACTGCTTCACCAGTCCCGACTACC...TGTGCCTAAATGTCTACTCTTCTGCTCTGGAGTTTGGTGAACTTCATGGTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR TCA 90 bp | CTGATGGTACGTTCTTTCCAACACACACAGCACAGATCATGTCAGACCCTATCCCCATCAGTTCACACTTaGGCCTCTCCAAACCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: LMVRSFQHTQHRSCQTLSPSVHT*ASPNPA Trigger: CGCTGGGTTTGGAGAGGCTCAAGTGTGAACTGATGG...GGATAGGGTCTGACATGATCTGTGCTGTGTGTGTTGGAAAGAACGTACCATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR TCA 90 bp | CACAGCACAGATCATGTCAGACCCTATCCTGGGTCAGTCACAACAAGGATGCCACTCAGTGATTTCTGCTaGTACCATCTTGCTGGATGC | + |
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Preference number: 4 (lower is better) Translates to: HSTDHVRPYPGSVTTRMPLSDFC*YHLAGC Trigger: GCATCCAGCAAGATGGTATCAGCAGAAATCACTGAG...TGGCATCCTTGTTGTGACTGACCCAGGATAGGGTCTGACATGATCTGTGCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR TCA 90 bp | CCGGCTGATGGTACGTTCTTTCCAACACACACAGCACAGATCATGTCAGACCCTAAGAGCTGTGTCTCCTaGGTTGTTTCCCTCCAGATT | + |
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Preference number: 4 (lower is better) Translates to: PADGTFFPTHTAQIMSDPKSCVS*VVSLQI Trigger: AATCTGGAGGGAAACAACTCAGGAGACACAGCTCTT...AGGGTCTGACATGATCTGTGCTGTGTGTGTTGGAAAGAACGTACCATCAGCCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR CCA 90 bp | CTGATGGTACGTTCTTTCCAACACACACAGCACAGATCATGTCAGACCCTATCCGTCAGAGGTCTCTCCTaGCTCAGTTCCTGTGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: LMVRSFQHTQHRSCQTLSVRGLS*LSSCVL Trigger: GAGAACACAGGAACTGAGCCAGGAGAGACCTCTGAC...GGATAGGGTCTGACATGATCTGTGCTGTGTGTGTTGGAAAGAACGTACCATCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR CCA 90 bp | CCACCCTGCTGCCGGCTGATGGTACGTTCTTTCCAACACACACAGCACAGATCAACTTCTTCTTCCCCTTaGAAGGCTTGGCAAATAAAG | + |
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Preference number: 4 (lower is better) Translates to: PPCCRLMVRSFQHTQHRSTSSSP*KAWQIK Trigger: CTTTATTTGCCAAGCCTTCCAAGGGGAAGAAGAAGT...TGATCTGTGCTGTGTGTGTTGGAAAGAACGTACCATCAGCCGGCAGCAGGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR CCA 90 bp | GGCACAGCAGCTCATGCGAGACAGGAGGATCACTGCAAGTTTGAGACCAAAGTGTTTGGTCCTTTTCTGTaGCCTCATGACTCTCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: GTAAHARQEDHCKFETKVFGPFL*PHDSLF Trigger: AAACAGAGAGTCATGAGGCCACAGAAAAGGACCAAA...CACTTTGGTCTCAAACTTGCAGTGATCCTCCTGTCTCGCATGAGCTGCTGTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR CCA 90 bp | CAGCTAGGCTCCATCCCTGGTCTCACACACACACACACACACACACATTCATATTCCCCTTGGAAGGCTTaGCAAATAAAGCTGGGTCAA | + |
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Preference number: 4 (lower is better) Translates to: QLGSIPGLTHTHTHTHSYSPWKA*QIKLGQ Trigger: TTGACCCAGCTTTATTTGCCAAGCCTTCCAAGGGGA...ATATGAATGTGTGTGTGTGTGTGTGTGTGTGAGACCAGGGATGGAGCCTAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR TCA 90 bp | CAAAACCATGAAGTTCACCAAACTCCAGAGCAGAAGAGTAGACATTTAGGCACACAGCCTGCATACCTTTaGGGACTGAGTCCTCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: QNHEVHQTPEQKSRHLGTQPAYL*GLSPPD Trigger: GTCTGGAGGACTCAGTCCTCAAAGGTATGCAGGCTG...TGTGCCTAAATGTCTACTCTTCTGCTCTGGAGTTTGGTGAACTTCATGGTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR GCA 90 bp | CTGATGGTACGTTCTTTCCAACACACACAGCACAGATCATGTCAGACCCTATCCTACCATCTTGCTGGATaGAGCCTGCATACCTTTGAG | + |
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Preference number: 4 (lower is better) Translates to: LMVRSFQHTQHRSCQTLSYHLAG*SLHTFE Trigger: CTCAAAGGTATGCAGGCTGCATCCAGCAAGATGGTA...GGATAGGGTCTGACATGATCTGTGCTGTGTGTGTTGGAAAGAACGTACCATCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR TCA 90 bp | CTGATGGTACGTTCTTTCCAACACACACAGCACAGATCATGTCAGACCCTATCCTTTTCTGTGGCCTCATaGCTCTCTGTTTCCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LMVRSFQHTQHRSCQTLSFSVAS*LSVSFL Trigger: AAGGAAGGAAACAGAGAGTCATGAGGCCACAGAAAA...GGATAGGGTCTGACATGATCTGTGCTGTGTGTGTTGGAAAGAACGTACCATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR CCA 90 bp | CTGATGGTACGTTCTTTCCAACACACACAGCACAGATCATGTCAGACCCTATCCGACATTCCTGTCTTTTaGTCCTTTTCTGTGGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LMVRSFQHTQHRSCQTLSDIPVF*SFSVAS Trigger: TGAGGCCACAGAAAAGGACCAAAAGACAGGAATGTC...GGATAGGGTCTGACATGATCTGTGCTGTGTGTGTTGGAAAGAACGTACCATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS GCA 90 bp | TCCGAGGACTGCCAGGTCGGTCGGCTGCCACCTCTACAGCATCAATaGCGTCTTCCCGAGCACAGCAGCTCTGCTCCGAAGTCCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SEDCQVGRLPPLQHQ*RLPEHSSSAPKSQE Trigger: CTCCTGGGACTTCGGAGCAGAGCTGCTGTGCTCGGGAAGACGGCATTGATGCTGTAGAGGTGGCAGCCGACCGACCTGGCAGTCCTCGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS TCA 90 bp | GACGCTCAGCCATCTCATGGCACTGCCTCTGGTAGTCGGGACTGGTaGAGCAGTGTGCAGGCTCGGCAAGCTTTCGCTGCAGCCTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: DAQPSHGTASGSRDW*SSVQARQAFAAASP Trigger: TGGAGAGGCTGCAGCGAAAGCTTGCCGAGCCTGCACACTGCTTCACCAGTCCCGACTACCAGAGGCAGTGCCATGAGATGGCTGAGCGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS GCA 90 bp | CATCTCATGGCACTGCCTCTGGTAGTCGGGACTGGTGAAGCAGTGTaGAGGCTCGGCAAGCTTTCGCTGCAGCCTCTCCAGGCGCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: HLMALPLVVGTGEAV*RLGKLSLQPLQAPL Trigger: CAAAGGCGCCTGGAGAGGCTGCAGCGAAAGCTTGCCGAGCCTGCACACTGCTTCACCAGTCCCGACTACCAGAGGCAGTGCCATGAGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS GCA 90 bp | GCCACCTCTACAGCATCAATGCCGTCTTCCCGAGCACAGCAGCTCTaGTCCGAAGTCCCAGGAGCATCCTCACTGTCATCCTCTGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ATSTASMPSSRAQQL*SEVPGASSLSSSEL Trigger: CAGCTCAGAGGATGACAGTGAGGATGCTCCTGGGACTTCGGAGCAGAGCTGCTGTGCTCGGGAAGACGGCATTGATGCTGTAGAGGTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS GCA 90 bp | TGTGCAGGCTCGGCAAGCTTTCGCTGCAGCCTCTCCAGGCGCCTTTaGTCCTTTTCAGCCTCTCGCTCAGCTTGCTGTTTTACCCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: CAGSASFRCSLSRRL*SFSASRSACCFTHS Trigger: TGAGTGGGTAAAACAGCAAGCTGAGCGAGAGGCTGAAAAGGAGCAAAGGCGCCTGGAGAGGCTGCAGCGAAAGCTTGCCGAGCCTGCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR CAA 90 bp | CTGGGAACTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCGGTCTCTCCAGCCAGCCTCTCGCTCAGCTaGCTGTTTTACCCACTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LGTELRTFGRAVSAVSPASLSLS*LFYPLS Trigger: GCTGAGTGGGTAAAACAGCAAGCTGAGCGAGAGGCT...GGCTGGAGAGACCGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAGTTCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS CCA 90 bp | TGTGACTGTCTTCCTCTCGTTGCACTCCTTGTCAGAGGTCTCTCCTaGCTCAGTTCCTGTGTTCTCCAAAATGCCCTGCCCAGGCTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: CDCLPLVALLVRGLS*LSSCVLQNALPRLG Trigger: ACCGAGCCTGGGCAGGGCATTTTGGAGAACACAGGAACTGAGCCAGGAGAGACCTCTGACAAGGAGTGCAACGAGAGGAAGACAGTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR CAA 90 bp | CACAGCACAGATCATGTCAGACCCTATCCTGGGTCAGTCACAACAAGGATGCCACCTCTCCAGGCGCCTTaGCTCCTTTTCAGCCTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: HSTDHVRPYPGSVTTRMPPLQAP*LLFSLS Trigger: CGAGAGGCTGAAAAGGAGCAAAGGCGCCTGGAGAGG...TGGCATCCTTGTTGTGACTGACCCAGGATAGGGTCTGACATGATCTGTGCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR CAA 90 bp | GGCACAGCAGCTCATGCGAGACAGGAGGATCACTGCAAGTTTGAGACCAAAGTGCTCTCGTTGCACTCCTaGTCAGAGGTCTCTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GTAAHARQEDHCKFETKVLSLHS*SEVSPG Trigger: GCCAGGAGAGACCTCTGACAAGGAGTGCAACGAGAG...CACTTTGGTCTCAAACTTGCAGTGATCCTCCTGTCTCGCATGAGCTGCTGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR CAA 90 bp | CTGGGAACTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCGGTCTCTCCAGCCACCATCAGTTCACACTaGAGCCTCTCCAAACCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LGTELRTFGRAVSAVSPATISSH*SLSKPS Trigger: GCTGGGTTTGGAGAGGCTCAAGTGTGAACTGATGGT...GGCTGGAGAGACCGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAGTTCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS CCA 90 bp | TGTGGCCTCATGACTCTCTGTTTCCTTCCTTGCTGGCGTCTCCTCTaGGTCTGTGACTGTCTTCCTCTCGTTGCACTCCTTGTCAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CGLMTLCFLPCWRLL*VCDCLPLVALLVRG Trigger: ACCTCTGACAAGGAGTGCAACGAGAGGAAGACAGTCACAGACCCAGAGGAGACGCCAGCAAGGAAGGAAACAGAGAGTCATGAGGCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS CCA 90 bp | TTGGTCCTTTTCTGTGGCCTCATGACTCTCTGTTTCCTTCCTTGCTaGCGTCTCCTCTGGGTCTGTGACTGTCTTCCTCTCGTTGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: LVLFCGLMTLCFLPC*RLLWVCDCLPLVAL Trigger: GAGTGCAACGAGAGGAAGACAGTCACAGACCCAGAGGAGACGCCAGCAAGGAAGGAAACAGAGAGTCATGAGGCCACAGAAAAGGACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR CAA 90 bp | CACAGCACAGATCATGTCAGACCCTATCCTGGGTCAGTCACAACAAGGATGCCAGCAGCCTGCATACCTTaGAGGACTGAGTCCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: HSTDHVRPYPGSVTTRMPAACIP*RTESSR Trigger: TCTGGAGGACTCAGTCCTCAAAGGTATGCAGGCTGC...TGGCATCCTTGTTGTGACTGACCCAGGATAGGGTCTGACATGATCTGTGCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR CAA 90 bp | CCGGCTGATGGTACGTTCTTTCCAACACACACAGCACAGATCATGTCAGACCCTTCTCTGTTTCCTTCCTaGCTGGCGTCTCCTCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PADGTFFPTHTAQIMSDPSLFPS*LASPLG Trigger: ACCCAGAGGAGACGCCAGCAAGGAAGGAAACAGAGA...AGGGTCTGACATGATCTGTGCTGTGTGTGTTGGAAAGAACGTACCATCAGCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS GCA 90 bp | CTTTTGGTCCTTTTCTGTGGCCTCATGACTCTCTGTTTCCTTCCTTaGTGGCGTCTCCTCTGGGTCTGTGACTGTCTTCCTCTCGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLVLFCGLMTLCFLP*WRLLWVCDCLPLVA Trigger: TGCAACGAGAGGAAGACAGTCACAGACCCAGAGGAGACGCCAGCAAGGAAGGAAACAGAGAGTCATGAGGCCACAGAAAAGGACCAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR CAA 90 bp | CTGGGAACTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCGGTCTCTCCAGCCAGGCTTCTCTATTGGTaGTCTTCTCTATCTGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LGTELRTFGRAVSAVSPARLLYW*SSLSVH Trigger: GTGCACAGATAGAGAAGACAACCAATAGAGAAGCCT...GGCTGGAGAGACCGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAGTTCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR CAA 90 bp | CCGGCTGATGGTACGTTCTTTCCAACACACACAGCACAGATCATGTCAGACCCTACTGTCTTCCTCTCGTaGCACTCCTTGTCAGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PADGTFFPTHTAQIMSDPTVFLS*HSLSEV Trigger: GACCTCTGACAAGGAGTGCAACGAGAGGAAGACAGT...AGGGTCTGACATGATCTGTGCTGTGTGTGTTGGAAAGAACGTACCATCAGCCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR CAA 90 bp | GGCACAGCAGCTCATGCGAGACAGGAGGATCACTGCAAGTTTGAGACCAAAGTGTTCCCCTTGGAAGGCTaGGCAAATAAAGCTGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GTAAHARQEDHCKFETKVFPLEG*ANKAGS Trigger: TGACCCAGCTTTATTTGCCAAGCCTTCCAAGGGGAA...CACTTTGGTCTCAAACTTGCAGTGATCCTCCTGTCTCGCATGAGCTGCTGTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR CAA 90 bp | CACAGCACAGATCATGTCAGACCCTATCCTGGGTCAGTCACAACAAGGATGCCATCTGCTGATACCATCTaGCTGGATGCAGCCTGCATA | + |
|
Preference number: 5 (lower is better) Translates to: HSTDHVRPYPGSVTTRMPSADTI*LDAACI Trigger: TATGCAGGCTGCATCCAGCAAGATGGTATCAGCAGA...TGGCATCCTTGTTGTGACTGACCCAGGATAGGGTCTGACATGATCTGTGCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR CAA 90 bp | CCGGCTGATGGTACGTTCTTTCCAACACACACAGCACAGATCATGTCAGACCCTCGGCAGGCTTCTCTATaGGTTGTCTTCTCTATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PADGTFFPTHTAQIMSDPRQASL*VVFSIC Trigger: ACAGATAGAGAAGACAACCAATAGAGAAGCCTGCCG...AGGGTCTGACATGATCTGTGCTGTGTGTGTTGGAAAGAACGTACCATCAGCCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR CAA 90 bp | CACAGCACAGATCATGTCAGACCCTATCCTGGGTCAGTCACAACAAGGATGCCACACTTCTTCTTCCCCTaGGAAGGCTTGGCAAATAAA | + |
|
Preference number: 5 (lower is better) Translates to: HSTDHVRPYPGSVTTRMPHFFFP*EGLANK Trigger: TTTATTTGCCAAGCCTTCCAAGGGGAAGAAGAAGTG...TGGCATCCTTGTTGTGACTGACCCAGGATAGGGTCTGACATGATCTGTGCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS-3UTR CAA 90 bp | CAAAACCATGAAGTTCACCAAACTCCAGAGCAGAAGAGTAGACATTTAGGCACAGCTGTGTCTCCTGAGTaGTTTCCCTCCAGATTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: QNHEVHQTPEQKSRHLGTAVSPE*FPSRLA Trigger: TGCTAATCTGGAGGGAAACAACTCAGGAGACACAGC...TGTGCCTAAATGTCTACTCTTCTGCTCTGGAGTTTGGTGAACTTCATGGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS GCA 72 bp | CTGGTGAAGCAGTGTGCAGGCTCGGCAAGCTTTCGCTaGAGCCTCTCCAGGCGCCTTTGCTCCTTTTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LVKQCAGSASFR*SLSRRLCSFSA Trigger: GGCTGAAAAGGAGCAAAGGCGCCTGGAGAGGCTGCAGCGAAAGCTTGCCGAGCCTGCACACTGCTTCACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS TCA 72 bp | CCATCTCATGGCACTGCCTCTGGTAGTCGGGACTGGTaGAGCAGTGTGCAGGCTCGGCAAGCTTTCGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PSHGTASGSRDW*SSVQARQAFAA Trigger: TGCAGCGAAAGCTTGCCGAGCCTGCACACTGCTTCACCAGTCCCGACTACCAGAGGCAGTGCCATGAGATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS GCA 72 bp | AGGTCTCTCCTGGCTCAGTTCCTGTGTTCTCCAAAATaGCCTGCCCAGGCTCGGTCACGGGGCACTGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RSLLAQFLCSPK*PAQARSRGTEA Trigger: AGCTTCAGTGCCCCGTGACCGAGCCTGGGCAGGGCATTTTGGAGAACACAGGAACTGAGCCAGGAGAGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS TCA 72 bp | ACCCAGCGACTCCAACTCGGCTGCAGAGCTGAATGCTaGCAGATCCACCGCTTCCAGACCAAGAGCTGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: TQRLQLGCRAEC*QIHRFQTKSCV Trigger: GACACAGCTCTTGGTCTGGAAGCGGTGGATCTGTCAGCATTCAGCTCTGCAGCCGAGTTGGAGTCGCTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS TCA 72 bp | TCTCCAAACCCAGCGACTCCAACTCGGCTGCAGAGCTaGATGCTGACAGATCCACCGCTTCCAGACCAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SPNPATPTRLQS*MLTDPPLPDQE Trigger: CTCTTGGTCTGGAAGCGGTGGATCTGTCAGCATTCAGCTCTGCAGCCGAGTTGGAGTCGCTGGGTTTGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS CAA 72 bp | GGCGTCTCCTCTGGGTCTGTGACTGTCTTCCTCTCGTaGCACTCCTTGTCAGAGGTCTCTCCTGGCTCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: GVSSGSVTVFLS*HSLSEVSPGSV Trigger: AACTGAGCCAGGAGAGACCTCTGACAAGGAGTGCAACGAGAGGAAGACAGTCACAGACCCAGAGGAGACGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS CAA 72 bp | CCCCCACACTTCAGTCCAAGGACCATCAGTTCACACTaGAGCCTCTCCAAACCCAGCGACTCCAACTCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: PPHFSPRTISSH*SLSKPSDSNSA Trigger: AGCCGAGTTGGAGTCGCTGGGTTTGGAGAGGCTCAAGTGTGAACTGATGGTCCTTGGACTGAAGTGTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS CAA 90 bp | TTCCTTGCTGGCGTCTCCTCTGGGTCTGTGACTGTCTTCCTCTCGTaGCACTCCTTGTCAGAGGTCTCTCCTGGCTCAGTTCCTGTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: FLAGVSSGSVTVFLS*HSLSEVSPGSVPVF Trigger: GAACACAGGAACTGAGCCAGGAGAGACCTCTGACAAGGAGTGCAACGAGAGGAAGACAGTCACAGACCCAGAGGAGACGCCAGCAAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS CCA 72 bp | CTTCCTCTCGTTGCACTCCTTGTCAGAGGTCTCTCCTaGCTCAGTTCCTGTGTTCTCCAAAATGCCCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LPLVALLVRGLS*LSSCVLQNALP Trigger: GGGCAGGGCATTTTGGAGAACACAGGAACTGAGCCAGGAGAGACCTCTGACAAGGAGTGCAACGAGAGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS TCA 72 bp | CAGATCCACCGCTTCCAGACCAAGAGCTGTGTCTCCTaGGTTGTTTCCCTCCAGATTAGCAGCAGGGACACT | + |
|
Preference number: 6 (lower is better) Translates to: QIHRFQTKSCVS*VVSLQISSRDT Trigger: AGTGTCCCTGCTGCTAATCTGGAGGGAAACAACTCAGGAGACACAGCTCTTGGTCTGGAAGCGGTGGATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS CAA 72 bp | CAGGCGCCTTTGCTCCTTTTCAGCCTCTCGCTCAGCTaGCTGTTTTACCCACTCAGCCATCGCTTTCTCATG | + |
|
Preference number: 6 (lower is better) Translates to: QAPLLLFSLSLS*LFYPLSHRFLM Trigger: CATGAGAAAGCGATGGCTGAGTGGGTAAAACAGCAAGCTGAGCGAGAGGCTGAAAAGGAGCAAAGGCGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS CAA 90 bp | ACGGCTCCATGCTGCACCTTATCACCGGCATTAACGAGGACTCCATaGCACGTCACAAAGAAGCATTCCACGGGAACTTCCTGTTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TAPCCTLSPALTRTP*HVTKKHSTGTSCSW Trigger: CCAGGAACAGGAAGTTCCCGTGGAATGCTTCTTTGTGACGTGCAATGGAGTCCTCGTTAATGCCGGTGATAAGGTGCAGCATGGAGCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS CAA 72 bp | TCCACCGCTTCCAGACCAAGAGCTGTGTCTCCTGAGTaGTTTCCCTCCAGATTAGCAGCAGGGACACTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: STASRPRAVSPE*FPSRLAAGTLF Trigger: GAAAAGTGTCCCTGCTGCTAATCTGGAGGGAAACAACTCAGGAGACACAGCTCTTGGTCTGGAAGCGGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS GCA 72 bp | CCGGCAGGCTTCTCTATTGGTTGTCTTCTCTATCTGTaGACCAAGTGCTCGAAGCATAGACCCAAAACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PAGFSIGCLLYL*TKCSKHRPKTS Trigger: GGAGGTTTTGGGTCTATGCTTCGAGCACTTGGTGCACAGATAGAGAAGACAACCAATAGAGAAGCCTGCCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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| CDS CAA 72 bp | TGCTGCACCTTATCACCGGCATTAACGAGGACTCCATaGCACGTCACAAAGAAGCATTCCACGGGAACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: CCTLSPALTRTP*HVTKKHSTGTS Trigger: GGAAGTTCCCGTGGAATGCTTCTTTGTGACGTGCAATGGAGTCCTCGTTAATGCCGGTGATAAGGTGCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
||
| CDS CAA 72 bp | AATCTCCTCCCACTGAGATCCCGGCAGGCTTCTCTATaGGTTGTCTTCTCTATCTGTGCACCAAGTGCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: NLLPLRSRQASL*VVFSICAPSAR Trigger: TCGAGCACTTGGTGCACAGATAGAGAAGACAACCAATAGAGAAGCCTGCCGGGATCTCAGTGGGAGGAGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
||
| CDS CAA 90 bp | ACATCTCGTAATCTCCTCCCACTGAGATCCCGGCAGGCTTCTCTATaGGTTGTCTTCTCTATCTGTGCACCAAGTGCTCGAAGCATAGAC | + |
|
Preference number: 6 (lower is better) Translates to: TSRNLLPLRSRQASL*VVFSICAPSARSID Trigger: GTCTATGCTTCGAGCACTTGGTGCACAGATAGAGAAGACAACCAATAGAGAAGCCTGCCGGGATCTCAGTGGGAGGAGATTACGAGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
||
| CDS CAA 90 bp | TTGTTAGGCCGTTTCCGAGTCTCAGTGATTTCTGCTGATACCATCTaGCTGGATGCAGCCTGCATACCTTTGAGGACTGAGTCCTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LLGRFRVSVISADTI*LDAACIPLRTESSR Trigger: TCTGGAGGACTCAGTCCTCAAAGGTATGCAGGCTGCATCCAGCAAGATGGTATCAGCAGAAATCACTGAGACTCGGAAACGGCCTAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
||
| CDS CAA 72 bp | CGTTTCCGAGTCTCAGTGATTTCTGCTGATACCATCTaGCTGGATGCAGCCTGCATACCTTTGAGGACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: RFRVSVISADTI*LDAACIPLRTE Trigger: CTCAGTCCTCAAAGGTATGCAGGCTGCATCCAGCAAGATGGTATCAGCAGAAATCACTGAGACTCGGAAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
||
| CDS TCA 72 bp | GCTTGCTGTTTTACCCACTCAGCCATCGCTTTCTCATaGTTGACATCTCGTAATCTCCTCCCACTGAGATCC | + |
|
Preference number: 6 (lower is better) Translates to: ACCFTHSAIAFS*LTSRNLLPLRS Trigger: GGATCTCAGTGGGAGGAGATTACGAGATGTCAATCATGAGAAAGCGATGGCTGAGTGGGTAAAACAGCAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
||
| CDS TCA 72 bp | CTTGTTAGGCCGTTTCCGAGTCTCAGTGATTTCTGCTaGTACCATCTTGCTGGATGCAGCCTGCATACCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LVRPFPSLSDFC*YHLAGCSLHTF Trigger: AAAGGTATGCAGGCTGCATCCAGCAAGATGGTATCAGCAGAAATCACTGAGACTCGGAAACGGCCTAACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038091.8 |
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