Pregenerated sensors for SDCCAG8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026504Ensembl transcript IDs: ENSMUST00000027785.15, ENSMUST00000056773.15, ENSMUST00000123409.8
Found 247 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCCAGCAGCTCTGTGACTCGCAGGCACTCCTGTCTGGCCCGAGCTaGCTTCTGCTGCTCCTGTTCCACATGCTGCTCGCTTTCGCTCAG | + |
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Preference number: 1 (lower is better) Translates to: AQQLCDSQALLSGPS*LLLLLFHMLLAFAQ Trigger: CTGAGCGAAAGCGAGCAGCATGTGGAACAGGAGCAGCAGAAGGCAGCTCGGGCCAGACAGGAGTGCCTGCGAGTCACAGAGCTGCTGGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR GCA 90 bp | TCTGTGACTCGCAGGCACTCCTGTCTGGCCCGAGCTGCCTTCTGCTaGTCCTGTTCCACATGCTGCTCGCTTTCGCTCAGTTCTAGTCTC | + |
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Preference number: 1 (lower is better) Translates to: SVTRRHSCLARAAFC*SCSTCCSLSLSSSL Trigger: GAGACTAGAACTGAGCGAAAGCGAGCAGCATGTGGAACAGGAGCAGCAGAAGGCAGCTCGGGCCAGACAGGAGTGCCTGCGAGTCACAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR TCA 90 bp | AGCCGGGCCACTTCCTCAGACAGGTTCTGTCGCTCCAGGAGAAGCTaGTTCTGCTTGTTAAGCAACTGCACCAGCTGCTGCGCTGTAGCC | + |
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Preference number: 1 (lower is better) Translates to: SRATSSDRFCRSRRS*FCLLSNCTSCCAVA Trigger: GGCTACAGCGCAGCAGCTGGTGCAGTTGCTTAACAAGCAGAATCAGCTTCTCCTGGAGCGACAGAACCTGTCTGAGGAAGTGGCCCGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR GCA 90 bp | AACTGCACCAGCTGCTGCGCTGTAGCCTGGCCGTGCTTATCCAGCTaGCTGAGTCTTTCCTTCATGGTCTCATGCACCCTCCCATGTTGG | + |
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Preference number: 1 (lower is better) Translates to: NCTSCCAVAWPCLSS*LSLSFMVSCTLPCW Trigger: CCAACATGGGAGGGTGCATGAGACCATGAAGGAAAGACTCAGGCAGCTGGATAAGCACGGCCAGGCTACAGCGCAGCAGCTGGTGCAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR GCA 90 bp | CTGTTTCATCCAGGTCAGCAATCAGATTGTGGCATGCTGGGTAACTaGGCTCGCAGCCGGGCCACTTCCTCAGACAGGTTCTGTCGCTCC | + |
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Preference number: 1 (lower is better) Translates to: LFHPGQQSDCGMLGN*ARSRATSSDRFCRS Trigger: GGAGCGACAGAACCTGTCTGAGGAAGTGGCCCGGCTGCGAGCGCAGTTACCCAGCATGCCACAATCTGATTGCTGACCTGGATGAAACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR GCA 90 bp | TGCTTGTTAAGCAACTGCACCAGCTGCTGCGCTGTAGCCTGGCCGTaGTTATCCAGCTGCCTGAGTCTTTCCTTCATGGTCTCATGCACC | + |
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Preference number: 1 (lower is better) Translates to: CLLSNCTSCCAVAWP*LSSCLSLSFMVSCT Trigger: GGTGCATGAGACCATGAAGGAAAGACTCAGGCAGCTGGATAAGCACGGCCAGGCTACAGCGCAGCAGCTGGTGCAGTTGCTTAACAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR CCA 90 bp | ATTTCACTCTGTTTCATCCAGGTCAGCAATCAGATTGTGGCATGCTaGGTAACTGCGCTCGCAGCCGGGCCACTTCCTCAGACAGGTTCT | + |
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Preference number: 1 (lower is better) Translates to: ISLCFIQVSNQIVAC*VTALAAGPLPQTGS Trigger: AGAACCTGTCTGAGGAAGTGGCCCGGCTGCGAGCGCAGTTACCCAGCATGCCACAATCTGATTGCTGACCTGGATGAAACAGAGTGAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR TCA 90 bp | TCCCTGGTGACCTTTTCAACCTGGGCCTCCAGCTTGGCAATATTCTaGGACAGGATCAACATCTTTGACTCTGCATCTTCCCTCTCTCTG | + |
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Preference number: 1 (lower is better) Translates to: SLVTFSTWASSLAIF*DRINIFDSASSLSL Trigger: CAGAGAGAGGGAAGATGCAGAGTCAAAGATGTTGATCCTGTCTCAGAATATTGCCAAGCTGGAGGCCCAGGTTGAAAAGGTCACCAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR GCA 90 bp | TGGCCGTGCTTATCCAGCTGCCTGAGTCTTTCCTTCATGGTCTCATaGACCCTCCCATGTTGGATGCATTGCTCTTCTAGTTCGTCATTT | + |
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Preference number: 1 (lower is better) Translates to: WPCLSSCLSLSFMVS*TLPCWMHCSSSSSF Trigger: AAATGACGAACTAGAAGAGCAATGCATCCAACATGGGAGGGTGCATGAGACCATGAAGGAAAGACTCAGGCAGCTGGATAAGCACGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR CCA 90 bp | AGCTGCCTGAGTCTTTCCTTCATGGTCTCATGCACCCTCCCATGTTaGATGCATTGCTCTTCTAGTTCGTCATTTCTCTTCTGTAACTTC | + |
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Preference number: 1 (lower is better) Translates to: SCLSLSFMVSCTLPC*MHCSSSSSFLFCNF Trigger: GAAGTTACAGAAGAGAAATGACGAACTAGAAGAGCAATGCATCCAACATGGGAGGGTGCATGAGACCATGAAGGAAAGACTCAGGCAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR GCA 90 bp | AGTCTTTCCTTCATGGTCTCATGCACCCTCCCATGTTGGATGCATTaGTCTTCTAGTTCGTCATTTCTCTTCTGTAACTTCTCTAGCTTG | + |
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Preference number: 1 (lower is better) Translates to: SLSFMVSCTLPCWMH*SSSSSFLFCNFSSL Trigger: CAAGCTAGAGAAGTTACAGAAGAGAAATGACGAACTAGAAGAGCAATGCATCCAACATGGGAGGGTGCATGAGACCATGAAGGAAAGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCTCGCCCAGCAGCTCTGTGACTCGCAGGCACTCCTGTCTGGCCCGAGCTGCCAGTCTTCTCCCTGGTaGCCTTTTCAACCTGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: GLAQQLCDSQALLSGPSCQSSPW*PFQPGP Trigger: AGGCCCAGGTTGAAAAGGTCACCAGGGAGAAGACTG...GCAGCTCGGGCCAGACAGGAGTGCCTGCGAGTCACAGAGCTGCTGGGCGAGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR-3UTR TCA 90 bp | TCGGCCTCGCCCAGCAGCTCTGTGACTCGCAGGCACTCCTGTCTGGCCCGAGCTGCCCTCTTTTCTTGCTaGGAGGCAAGCTCCTTTTCC | + |
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Preference number: 2 (lower is better) Translates to: SASPSSSVTRRHSCLARAALFSC*EASSFS Trigger: GGAAAAGGAGCTTGCCTCTCAGCAAGAAAAGAGGGC...AGCTCGGGCCAGACAGGAGTGCCTGCGAGTCACAGAGCTGCTGGGCGAGGCCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGATTGTGGCATGCTGGGTAACTGCGCTCGCAGCCGGGCCACTTCCTCAGACCCCTGCAGTCCCTGGTaGTGTCTCCCTGGGGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: SDCGMLGNCARSRATSSDPCSPW*CLPGEV Trigger: AACCTCCCCAGGGAGACACCACCAGGGACTGCAGGG...GTCTGAGGAAGTGGCCCGGCTGCGAGCGCAGTTACCCAGCATGCCACAATCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCTTGTTAAGCAACTGCACCAGCTGCTGCGCTGTAGCCTGGCCGTGCTTATCCTGGTGAGGTGCAGTTaGCGCTCGGCCTCGCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: LLVKQLHQLLRCSLAVLILVRCS*RSASPS Trigger: GCTGGGCGAGGCCGAGCGCCAACTGCACCTCACCAG...GATAAGCACGGCCAGGCTACAGCGCAGCAGCTGGTGCAGTTGCTTAACAAGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGCGCTCGCAGCCGGGCCACTTCCTCAGACAGGTTCTGTCGCTCCAGGAGAAGCTGTAGCCTGGCCGTaGTTATCCAGCTGCCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: TALAAGPLPQTGSVAPGEAVAWP*LSSCLS Trigger: ACTCAGGCAGCTGGATAAGCACGGCCAGGCTACAGC...TTCTCCTGGAGCGACAGAACCTGTCTGAGGAAGTGGCCCGGCTGCGAGCGCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR-3UTR CCA 90 bp | ACGAGCCCTAGCCAGTTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGCCCTGCAGTCCCTGGTaGTGTCTCCCTGGGGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: TSPSQLMLKQALPVHSTGPCSPW*CLPGEV Trigger: AACCTCCCCAGGGAGACACCACCAGGGACTGCAGGG...CCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAACTGGCTAGGGCTCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGATTGTGGCATGCTGGGTAACTGCGCTCGCAGCCGGGCCACTTCCTCAGACGACTTGAAGCTGTTCTaGGCACACACTCCCAACGAG | + |
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Preference number: 2 (lower is better) Translates to: SDCGMLGNCARSRATSSDDLKLF*AHTPNE Trigger: CTCGTTGGGAGTGTGTGCTCAGAACAGCTTCAAGTC...GTCTGAGGAAGTGGCCCGGCTGCGAGCGCAGTTACCCAGCATGCCACAATCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR-3UTR TCA 90 bp | TCACTCTGTTTCATCCAGGTCAGCAATCAGATTGTGGCATGCTGGGTAACTGCGCGCCCAGCAGCTCTGTaGCTCGCAGGCACTCCTGTC | + |
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Preference number: 2 (lower is better) Translates to: SLCFIQVSNQIVACWVTARPAAL*LAGTPV Trigger: GACAGGAGTGCCTGCGAGTCACAGAGCTGCTGGGCG...CGCAGTTACCCAGCATGCCACAATCTGATTGCTGACCTGGATGAAACAGAGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGATTGTGGCATGCTGGGTAACTGCGCTCGCAGCCGGGCCACTTCCTCAGACCAGGATCAACATCTTTaGCTCTGCATCTTCCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: SDCGMLGNCARSRATSSDQDQHL*LCIFPL Trigger: GAGAGGGAAGATGCAGAGTCAAAGATGTTGATCCTG...GTCTGAGGAAGTGGCCCGGCTGCGAGCGCAGTTACCCAGCATGCCACAATCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR-3UTR GCA 90 bp | CTCGCAGCCGGGCCACTTCCTCAGACAGGTTCTGTCGCTCCAGGAGAAGCTGATAAGGGCTTGGGCCTTTaGTTCATTGCTAAAGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: LAAGPLPQTGSVAPGEADKGLGL*FIAKAL Trigger: CAAAGCTTTAGCAATGAAGCAAAGGCCCAAGCCCTT...ATCAGCTTCTCCTGGAGCGACAGAACCTGTCTGAGGAAGTGGCCCGGCTGCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTTCTGCTGCTCCTGTTCCACATGCTGCTCGCTTTCGCTCAGTTCTAGTCTCGTGACCTTTTCAACCTaGGCCTCCAGCTTGGCAATA | + |
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Preference number: 2 (lower is better) Translates to: AFCCSCSTCCSLSLSSSLVTFST*ASSLAI Trigger: TATTGCCAAGCTGGAGGCCCAGGTTGAAAAGGTCAC...GAGACTAGAACTGAGCGAAAGCGAGCAGCATGTGGAACAGGAGCAGCAGAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR-3UTR TCA 90 bp | CTCGCAGCCGGGCCACTTCCTCAGACAGGTTCTGTCGCTCCAGGAGAAGCTGATAGCTTGGCAATATTCTaGGACAGGATCAACATCTTT | + |
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Preference number: 2 (lower is better) Translates to: LAAGPLPQTGSVAPGEADSLAIF*DRINIF Trigger: AAAGATGTTGATCCTGTCTCAGAATATTGCCAAGCT...ATCAGCTTCTCCTGGAGCGACAGAACCTGTCTGAGGAAGTGGCCCGGCTGCGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR-3UTR TCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGTCATGTTACTGCTTCTaGAGCAATCAGGAGACCCTC | + |
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Preference number: 2 (lower is better) Translates to: LMLKQALPVHSTGTDHGMSCYCF*SNQETL Trigger: GAGGGTCTCCTGATTGCTTCAGAAGCAGTAACATGA...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR-3UTR GCA 90 bp | CTCGCAGCCGGGCCACTTCCTCAGACAGGTTCTGTCGCTCCAGGAGAAGCTGATATCCTTGTGAGACTTTaGTTTGTATTCTCTGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: LAAGPLPQTGSVAPGEADILVRL*FVFSVF Trigger: GAACACAGAGAATACAAAGCAAAGTCTCACAAGGAT...ATCAGCTTCTCCTGGAGCGACAGAACCTGTCTGAGGAAGTGGCCCGGCTGCGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR-3UTR CCA 90 bp | ACGAGCCCTAGCCAGTTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGGGTTTCGGTGCACTGTaGCACATTAAGTACAAATCA | + |
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Preference number: 2 (lower is better) Translates to: TSPSQLMLKQALPVHSTGGFGAL*HIKYKS Trigger: TGATTTGTACTTAATGTGCCACAGTGCACCGAAACC...CCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAACTGGCTAGGGCTCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
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| 3UTR-3UTR TCA 90 bp | TCACTCTGTTTCATCCAGGTCAGCAATCAGATTGTGGCATGCTGGGTAACTGCGCCTCTGAATATGAGGTaGATGAGGCTACTGCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: SLCFIQVSNQIVACWVTAPLNMR*MRLLLV Trigger: CACCAGCAGTAGCCTCATTCACCTCATATTCAGAGG...CGCAGTTACCCAGCATGCCACAATCTGATTGCTGACCTGGATGAAACAGAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR-3UTR GCA 90 bp | GCGCATTTCTCCACACACCTTTGTGACGTCCATTTCCTGAGACGCAACGTGGTTAGCTCACTCTTCAGCTaGTCACACTGGATCAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: AHFSTHLCDVHFLRRNVVSSLFS*SHWIKA Trigger: TGCTTTGATCCAGTGTGAGCAGCTGAAGAGTGAGCT...AACCACGTTGCGTCTCAGGAAATGGACGTCACAAAGGTGTGTGGAGAAATGCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR-3UTR TCA 90 bp | CACTTTCAGTTTTGTCGTGCTGGGTCTCCATTTGCTGTATCTTCTGTGTCAGCTCTCCACACACCTTTGTaGCGTCCATTTCCTGAGACG | + |
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Preference number: 2 (lower is better) Translates to: HFQFCRAGSPFAVSSVSALHTPL*RPFPET Trigger: CGTCTCAGGAAATGGACGTCACAAAGGTGTGTGGAG...AGCTGACACAGAAGATACAGCAAATGGAGACCCAGCACGACAAAACTGAAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR-3UTR TCA 90 bp | AAATACTGTTCACTTTCAGTTTTGTCGTGCTGGGTCTCCATTTGCTGTATCTTCGACAACGTAAATCAGTaGCTTGAAGCTGTTCTGAGC | + |
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Preference number: 2 (lower is better) Translates to: KYCSLSVLSCWVSICCIFDNVNQ*LEAVLS Trigger: GCTCAGAACAGCTTCAAGTCACTGATTTACGTTGTC...GAAGATACAGCAAATGGAGACCCAGCACGACAAAACTGAAAGTGAACAGTATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGTGAGACCTTTTCCAGTTTCTTGGCTAACAAGCAGCATTCTTCTTTTAATTGGTTTCGGTGCACTGTaGCACATTAAGTACAAATCA | + |
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Preference number: 2 (lower is better) Translates to: LVRPFPVSWLTSSILLLIGFGAL*HIKYKS Trigger: TGATTTGTACTTAATGTGCCACAGTGCACCGAAACC...AATTAAAAGAAGAATGCTGCTTGTTAGCCAAGAAACTGGAAAAGGTCTCACTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR-3UTR CAA 90 bp | CTGCTTGTTAAGCAACTGCACCAGCTGCTGCGCTGTAGCCTGGCCGTGCTTATCTCTGGTGAGGTGCAGTaGGCGCTCGGCCTCGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: LLVKQLHQLLRCSLAVLISGEVQ*ALGLAQ Trigger: CTGGGCGAGGCCGAGCGCCAACTGCACCTCACCAGA...GATAAGCACGGCCAGGCTACAGCGCAGCAGCTGGTGCAGTTGCTTAACAAGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR GCA 72 bp | CGCAGGCACTCCTGTCTGGCCCGAGCTGCCTTCTGCTaGTCCTGTTCCACATGCTGCTCGCTTTCGCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: RRHSCLARAAFC*SCSTCCSLSLS Trigger: ACTGAGCGAAAGCGAGCAGCATGTGGAACAGGAGCAGCAGAAGGCAGCTCGGGCCAGACAGGAGTGCCTGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR GCA 72 bp | CTCTGTGACTCGCAGGCACTCCTGTCTGGCCCGAGCTaGCTTCTGCTGCTCCTGTTCCACATGCTGCTCGCT | + |
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Preference number: 3 (lower is better) Translates to: LCDSQALLSGPS*LLLLLFHMLLA Trigger: AGCGAGCAGCATGTGGAACAGGAGCAGCAGAAGGCAGCTCGGGCCAGACAGGAGTGCCTGCGAGTCACAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR GCA 72 bp | CCAGGTCAGCAATCAGATTGTGGCATGCTGGGTAACTaGGCTCGCAGCCGGGCCACTTCCTCAGACAGGTTC | + |
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Preference number: 3 (lower is better) Translates to: PGQQSDCGMLGN*ARSRATSSDRF Trigger: GAACCTGTCTGAGGAAGTGGCCCGGCTGCGAGCGCAGTTACCCAGCATGCCACAATCTGATTGCTGACCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR-3UTR CAA 90 bp | TCAGATTGTGGCATGCTGGGTAACTGCGCTCGCAGCCGGGCCACTTCCTCAGACCACAGCCCTCTTTTCTaGCTGAGAGGCAAGCTCCTT | + |
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Preference number: 3 (lower is better) Translates to: SDCGMLGNCARSRATSSDHSPLF*LRGKLL Trigger: AAGGAGCTTGCCTCTCAGCAAGAAAAGAGGGCTGTG...GTCTGAGGAAGTGGCCCGGCTGCGAGCGCAGTTACCCAGCATGCCACAATCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR GCA 72 bp | AGCTGCTGCGCTGTAGCCTGGCCGTGCTTATCCAGCTaGCTGAGTCTTTCCTTCATGGTCTCATGCACCCTC | + |
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Preference number: 3 (lower is better) Translates to: SCCAVAWPCLSS*LSLSFMVSCTL Trigger: GAGGGTGCATGAGACCATGAAGGAAAGACTCAGGCAGCTGGATAAGCACGGCCAGGCTACAGCGCAGCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR GCA 72 bp | AGCAACTGCACCAGCTGCTGCGCTGTAGCCTGGCCGTaGTTATCCAGCTGCCTGAGTCTTTCCTTCATGGTC | + |
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Preference number: 3 (lower is better) Translates to: SNCTSCCAVAWP*LSSCLSLSFMV Trigger: GACCATGAAGGAAAGACTCAGGCAGCTGGATAAGCACGGCCAGGCTACAGCGCAGCAGCTGGTGCAGTTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR-3UTR CAA 90 bp | TCAGATTGTGGCATGCTGGGTAACTGCGCTCGCAGCCGGGCCACTTCCTCAGACGTGCTGGGTCTCCATTaGCTGTATCTTCTGTGTCAG | + |
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Preference number: 3 (lower is better) Translates to: SDCGMLGNCARSRATSSDVLGLH*LYLLCQ Trigger: CTGACACAGAAGATACAGCAAATGGAGACCCAGCAC...GTCTGAGGAAGTGGCCCGGCTGCGAGCGCAGTTACCCAGCATGCCACAATCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR GCA 72 bp | CTGGCCCGAGCTGCCTTCTGCTGCTCCTGTTCCACATaGTGCTCGCTTTCGCTCAGTTCTAGTCTCAACTTC | + |
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Preference number: 3 (lower is better) Translates to: LARAAFCCSCST*CSLSLSSSLNF Trigger: GAAGTTGAGACTAGAACTGAGCGAAAGCGAGCAGCATGTGGAACAGGAGCAGCAGAAGGCAGCTCGGGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR GCA 72 bp | CTCTGTTTCATCCAGGTCAGCAATCAGATTGTGGCATaGTGGGTAACTGCGCTCGCAGCCGGGCCACTTCCT | + |
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Preference number: 3 (lower is better) Translates to: LCFIQVSNQIVA*WVTALAAGPLP Trigger: AGGAAGTGGCCCGGCTGCGAGCGCAGTTACCCAGCATGCCACAATCTGATTGCTGACCTGGATGAAACAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR CCA 72 bp | TGTTTCATCCAGGTCAGCAATCAGATTGTGGCATGCTaGGTAACTGCGCTCGCAGCCGGGCCACTTCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: CFIQVSNQIVAC*VTALAAGPLPQ Trigger: CTGAGGAAGTGGCCCGGCTGCGAGCGCAGTTACCCAGCATGCCACAATCTGATTGCTGACCTGGATGAAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR GCA 72 bp | GCCCGAGCTGCCTTCTGCTGCTCCTGTTCCACATGCTaGTCGCTTTCGCTCAGTTCTAGTCTCAACTTCTCT | + |
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Preference number: 3 (lower is better) Translates to: ARAAFCCSCSTC*SLSLSSSLNFS Trigger: AGAGAAGTTGAGACTAGAACTGAGCGAAAGCGAGCAGCATGTGGAACAGGAGCAGCAGAAGGCAGCTCGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR CCA 72 bp | TTGTTAAGCAACTGCACCAGCTGCTGCGCTGTAGCCTaGCCGTGCTTATCCAGCTGCCTGAGTCTTTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: LLSNCTSCCAVA*PCLSSCLSLSF Trigger: GAAGGAAAGACTCAGGCAGCTGGATAAGCACGGCCAGGCTACAGCGCAGCAGCTGGTGCAGTTGCTTAACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR TCA 72 bp | ACTTCCTCAGACAGGTTCTGTCGCTCCAGGAGAAGCTaGTTCTGCTTGTTAAGCAACTGCACCAGCTGCTGC | + |
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Preference number: 3 (lower is better) Translates to: TSSDRFCRSRRS*FCLLSNCTSCC Trigger: GCAGCAGCTGGTGCAGTTGCTTAACAAGCAGAATCAGCTTCTCCTGGAGCGACAGAACCTGTCTGAGGAAGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR GCA 72 bp | CTGTTCTCTCTGCTGGGCCTGAAGGGCTTGGGCCTTTaGTTCATTGCTAAAGCTTTGCTGAATGCTATCTTT | + |
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Preference number: 3 (lower is better) Translates to: LFSLLGLKGLGL*FIAKALLNAIF Trigger: AAAGATAGCATTCAGCAAAGCTTTAGCAATGAAGCAAAGGCCCAAGCCCTTCAGGCCCAGCAGAGAGAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR TCA 72 bp | AGGGCTTGGGCCTTTGCTTCATTGCTAAAGCTTTGCTaGATGCTATCTTTTTCCAGTCTGGTGAGGTGCAGT | + |
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Preference number: 3 (lower is better) Translates to: RAWAFASLLKLC*MLSFSSLVRCS Trigger: ACTGCACCTCACCAGACTGGAAAAAGATAGCATTCAGCAAAGCTTTAGCAATGAAGCAAAGGCCCAAGCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
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| 3UTR TCA 72 bp | TATTCAACTGAAAGCGCATTTCTCCACACACCTTTGTaGCGTCCATTTCCTGAGACGCAACGTGGTTCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: YSTESAFLHTPL*RPFPETQRGSE Trigger: TTCAGAACCACGTTGCGTCTCAGGAAATGGACGTCACAAAGGTGTGTGGAGAAATGCGCTTTCAGTTGAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| 3UTR CCA 72 bp | CTGGTGGTGTCTCCCTGGGGAGGTTTCGGTGCACTGTaGCACATTAAGTACAAATCAGATGAATGTAAATAT | + |
|
Preference number: 3 (lower is better) Translates to: LVVSPWGGFGAL*HIKYKSDECKY Trigger: ATATTTACATTCATCTGATTTGTACTTAATGTGCCACAGTGCACCGAAACCTCCCCAGGGAGACACCACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| 3UTR CCA 72 bp | AGTCTTTCCTTCATGGTCTCATGCACCCTCCCATGTTaGATGCATTGCTCTTCTAGTTCGTCATTTCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SLSFMVSCTLPC*MHCSSSSSFLF Trigger: GAAGAGAAATGACGAACTAGAAGAGCAATGCATCCAACATGGGAGGGTGCATGAGACCATGAAGGAAAGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| 3UTR TCA 72 bp | TCCACCTCATCCTTCTCCATTTTGGTTTTATTCAACTaGAAGCGCATTTCTCCACACACCTTTGTGACGTCC | + |
|
Preference number: 3 (lower is better) Translates to: STSSFSILVLFN*KRISPHTFVTS Trigger: GGACGTCACAAAGGTGTGTGGAGAAATGCGCTTTCAGTTGAATAAAACCAAAATGGAGAAGGATGAGGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| 3UTR GCA 72 bp | TTCATGGTCTCATGCACCCTCCCATGTTGGATGCATTaGTCTTCTAGTTCGTCATTTCTCTTCTGTAACTTC | + |
|
Preference number: 3 (lower is better) Translates to: FMVSCTLPCWMH*SSSSSFLFCNF Trigger: GAAGTTACAGAAGAGAAATGACGAACTAGAAGAGCAATGCATCCAACATGGGAGGGTGCATGAGACCATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| 3UTR GCA 72 bp | TTTCCTTCATGGTCTCATGCACCCTCCCATGTTGGATaGATTGCTCTTCTAGTTCGTCATTTCTCTTCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: FPSWSHAPSHVG*IALLVRHFSSV Trigger: TACAGAAGAGAAATGACGAACTAGAAGAGCAATGCATCCAACATGGGAGGGTGCATGAGACCATGAAGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTCGCCCAGCAGCTCTGTGACTCGCAGGCACTCCTGTCTGGCCCGAGCTGCGCTTCCTCTGTCATCTaGACAGCATGCTTCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLAQQLCDSQALLSGPSCASSVI*TACFTC Trigger: GCAGGTGAAGCATGCTGTGCAGATGACAGAGGAAGC...GCAGCTCGGGCCAGACAGGAGTGCCTGCGAGTCACAGAGCTGCTGGGCGAGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| CDS-3UTR GCA 90 bp | TCGGCCTCGCCCAGCAGCTCTGTGACTCGCAGGCACTCCTGTCTGGCCCGAGCTCTTGTCTCTCTCTTCTaGGCTTCTGCCAAGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SASPSSSVTRRHSCLARALVSLF*ASAKLL Trigger: GAGCAGCTTGGCAGAAGCGCAGAAGAGAGAGACAAG...AGCTCGGGCCAGACAGGAGTGCCTGCGAGTCACAGAGCTGCTGGGCGAGGCCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| CDS-3UTR CCA 90 bp | ACGAGCCCTAGCCAGTTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGCTGGTGAGGTGCAGTTaGCGCTCGGCCTCGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSPSQLMLKQALPVHSTGLVRCS*RSASPS Trigger: GCTGGGCGAGGCCGAGCGCCAACTGCACCTCACCAG...CCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAACTGGCTAGGGCTCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS-3UTR GCA 90 bp | CTCGCAGCCGGGCCACTTCCTCAGACAGGTTCTGTCGCTCCAGGAGAAGCTGATACAGCATGGCTGTGCTaGAGCTCATGCCAGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LAAGPLPQTGSVAPGEADTAWLC*SSCQAT Trigger: GGTGGCCTGGCATGAGCTGCAGCACAGCCATGCTGT...ATCAGCTTCTCCTGGAGCGACAGAACCTGTCTGAGGAAGTGGCCCGGCTGCGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| CDS-3UTR CCA 90 bp | CTCGGCCTCGCCCAGCAGCTCTGTGACTCGCAGGCACTCCTGTCTGGCCCGAGCACGTTGCTGTGTGTCTaGGAAAGAACAGCTTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: LGLAQQLCDSQALLSGPSTLLCV*ERTASC Trigger: GCATGAAGCTGTTCTTTCCCAGACACACAGCAACGT...GCTCGGGCCAGACAGGAGTGCCTGCGAGTCACAGAGCTGCTGGGCGAGGCCGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTTGTTAAGCAACTGCACCAGCTGCTGCGCTGTAGCCTGGCCGTGCTTATCCTGTGCTGCAGCTCATaGCAGGCCACCCCTGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLVKQLHQLLRCSLAVLILCCSS*QATPVS Trigger: GGACACAGGGGTGGCCTGGCATGAGCTGCAGCACAG...GATAAGCACGGCCAGGCTACAGCGCAGCAGCTGGTGCAGTTGCTTAACAAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTCGCCCAGCAGCTCTGTGACTCGCAGGCACTCCTGTCTGGCCCGAGCTGCCTGCATGTTTCCAGATaGATCCAGGAATGTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLAQQLCDSQALLSGPSCLHVSR*IQECLL Trigger: GAGCAAACATTCCTGGATGCATCTGGAAACATGCAG...GCAGCTCGGGCCAGACAGGAGTGCCTGCGAGTCACAGAGCTGCTGGGCGAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTCGCCCAGCAGCTCTGTGACTCGCAGGCACTCCTGTCTGGCCCGAGCTGCTGGTCTTCTCAAAGTTaGCTTCCTCTGTCATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLAQQLCDSQALLSGPSCWSSQS*LPLSSA Trigger: TGCAGATGACAGAGGAAGCCAACTTTGAGAAGACCA...GCAGCTCGGGCCAGACAGGAGTGCCTGCGAGTCACAGAGCTGCTGGGCGAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| CDS-3UTR TCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGCGCCCAGCAGCTCTGTaGCTCGCAGGCACTCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMRPAAL*LAGTPV Trigger: GACAGGAGTGCCTGCGAGTCACAGAGCTGCTGGGCG...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS-3UTR GCA 90 bp | TCCCGGGACTCCGCAGAAAGTTGTCTGCACAGACAAGAGTGTGGACCACAGAAGCTGTGCTGCAGCTCATaGCAGGCCACCCCTGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRDSAESCLHRQECGPQKLCCSS*QATPVS Trigger: GGACACAGGGGTGGCCTGGCATGAGCTGCAGCACAG...CTTCTGTGGTCCACACTCTTGTCTGTGCAGACAACTTTCTGCGGAGTCCCGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS-3UTR GCA 90 bp | ACGAGCCCTAGCCAGTTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGCATGGCTGTGCTaGAGCTCATGCCAGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: TSPSQLMLKQALPVHSTGTAWLC*SSCQAT Trigger: GGTGGCCTGGCATGAGCTGCAGCACAGCCATGCTGT...CCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAACTGGCTAGGGCTCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS-3UTR GCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGCTGTGCTGCAGCTCATaGCAGGCCACCCCTGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMLCCSS*QATPVS Trigger: GGACACAGGGGTGGCCTGGCATGAGCTGCAGCACAG...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS-3UTR GCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGAACTGCACCAGCTGCTaGGCTGTAGCCTGGCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMNCTSC*AVAWPC Trigger: GCACGGCCAGGCTACAGCGCAGCAGCTGGTGCAGTT...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS-3UTR GCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGAGCAACTGCACCAGCTaGTGCGCTGTAGCCTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMSNCTS*CAVAWP Trigger: CGGCCAGGCTACAGCGCAGCAGCTGGTGCAGTTGCT...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS-3UTR CCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGGCAGGCACTCCTGTCTaGCCCGAGCTGCCTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMAGTPV*PELPSA Trigger: AGCAGAAGGCAGCTCGGGCCAGACAGGAGTGCCTGC...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS-3UTR CCA 90 bp | ACGAGCCCTAGCCAGTTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGCAGATTGTGGCATGCTaGGTAACTGCGCTCGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TSPSQLMLKQALPVHSTGQIVAC*VTALAA Trigger: GGCTGCGAGCGCAGTTACCCAGCATGCCACAATCTG...CCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAACTGGCTAGGGCTCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS-3UTR CCA 90 bp | TTCTTCTCTCCCGGGACTCCGCAGAAAGTTGTCTGCACAGACAAGAGTGTGGACGGACAGGGGCCCTCCTaGCCCTGGAGGTTTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FFSPGTPQKVVCTDKSVDGQGPS*PWRFLP Trigger: AGGCAAAAACCTCCAGGGCCAGGAGGGCCCCTGTCC...GTCCACACTCTTGTCTGTGCAGACAACTTTCTGCGGAGTCCCGGGAGAGAAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS-3UTR TCA 90 bp | ACGAGCCCTAGCCAGTTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGCAGTCTTCTCCCTGGTaGCCTTTTCAACCTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TSPSQLMLKQALPVHSTGQSSPW*PFQPGP Trigger: AGGCCCAGGTTGAAAAGGTCACCAGGGAGAAGACTG...CCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAACTGGCTAGGGCTCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS-3UTR GCA 90 bp | TTCTTCTCTCCCGGGACTCCGCAGAAAGTTGTCTGCACAGACAAGAGTGTGGACACAGCATGGCTGTGCTaGAGCTCATGCCAGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: FFSPGTPQKVVCTDKSVDTAWLC*SSCQAT Trigger: GGTGGCCTGGCATGAGCTGCAGCACAGCCATGCTGT...GTCCACACTCTTGTCTGTGCAGACAACTTTCTGCGGAGTCCCGGGAGAGAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS-3UTR GCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGGCCCGAGCTGCCTTCTaGTGCTCCTGTTCCACATGC | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMARAAF*CSCSTC Trigger: GCATGTGGAACAGGAGCAGCAGAAGGCAGCTCGGGC...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS-3UTR GCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGCTGTCTGGCCCGAGCTaGCTTCTGCTGCTCCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMLSGPS*LLLLLF Trigger: GAACAGGAGCAGCAGAAGGCAGCTCGGGCCAGACAG...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS-3UTR CCA 90 bp | TTCTCTCCCGGGACTCCGCAGAAAGTTGTCTGCACAGACAAGAGTGTGGACCACTCCCGGAGACTCCGTTaGTATTGCCCCAGACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSPGTPQKVVCTDKSVDHSRRLR*YCPRLS Trigger: GGACAGTCTGGGGCAATACCAACGGAGTCTCCGGGA...GTGGTCCACACTCTTGTCTGTGCAGACAACTTTCTGCGGAGTCCCGGGAGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS-3UTR CCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGTGCTGCGCTGTAGCCTaGCCGTGCTTATCCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMCCAVA*PCLSSC Trigger: GCAGCTGGATAAGCACGGCCAGGCTACAGCGCAGCA...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS-3UTR TCA 90 bp | ACGAGCCCTAGCCAGTTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGTCTTCGCCTCGTATGTaGGTTTCAGCCTCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TSPSQLMLKQALPVHSTGSSPRM*VSASPA Trigger: AGCTGGAGAGGCTGAAACTCACATACGAGGCGAAGA...CCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAACTGGCTAGGGCTCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS-3UTR TCA 90 bp | ACGAGCCCTAGCCAGTTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGCTCCACACACCTTTGTaGCGTCCATTTCCTGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: TSPSQLMLKQALPVHSTGLHTPL*RPFPET Trigger: CGTCTCAGGAAATGGACGTCACAAAGGTGTGTGGAG...CCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAACTGGCTAGGGCTCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS-3UTR GCA 90 bp | ACGAGCCCTAGCCAGTTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGCTTGTCTCTCTCTTCTaGGCTTCTGCCAAGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TSPSQLMLKQALPVHSTGLVSLF*ASAKLL Trigger: GAGCAGCTTGGCAGAAGCGCAGAAGAGAGAGACAAG...CCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAACTGGCTAGGGCTCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS-3UTR GCA 90 bp | ACGAGCCCTAGCCAGTTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGGCTTCCTCTGTCATCTaGACAGCATGCTTCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TSPSQLMLKQALPVHSTGASSVI*TACFTC Trigger: GCAGGTGAAGCATGCTGTGCAGATGACAGAGGAAGC...CCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAACTGGCTAGGGCTCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS-3UTR GCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGCGAGCTGCCTTCTGCTaGTCCTGTTCCACATGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMRAAFC*SCSTCC Trigger: GCAGCATGTGGAACAGGAGCAGCAGAAGGCAGCTCG...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS-3UTR GCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGGCTGTAGCCTGGCCGTaGTTATCCAGCTGCCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMAVAWP*LSSCLS Trigger: ACTCAGGCAGCTGGATAAGCACGGCCAGGCTACAGC...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS-3UTR CCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGTCCCGGAGACTCCGTTaGTATTGCCCCAGACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMSRRLR*YCPRLS Trigger: GGACAGTCTGGGGCAATACCAACGGAGTCTCCGGGA...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS-3UTR CCA 90 bp | AATTCTTCTCTCCCGGGACTCCGCAGAAAGTTGTCTGCACAGACAAGAGTGTGGGGGCCCTCCTGGCCCTaGAGGTTTTTGCCTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NSSLPGLRRKLSAQTRVWGPSWP*RFLPQD Trigger: ATCCTGAGGCAAAAACCTCCAGGGCCAGGAGGGCCC...CCACACTCTTGTCTGTGCAGACAACTTTCTGCGGAGTCCCGGGAGAGAAGAATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS-3UTR TCA 90 bp | ACGAGCCCTAGCCAGTTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGGCTTATCCAGCTGCCTaGGTCTTTCCTTCATGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSPSQLMLKQALPVHSTGAYPAA*VFPSWS Trigger: AGACCATGAAGGAAAGACTCAGGCAGCTGGATAAGC...CCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAACTGGCTAGGGCTCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS-3UTR GCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGAGACTCCGTTGGTATTaGCCCAGACTGTCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMRLRWY*PRLSSR Trigger: CCTGGAGGACAGTCTGGGGCAATACCAACGGAGTCT...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTCTCTCCCGGGACTCCGCAGAAAGTTGTCTGCACAGACAAGAGTGTGGACAGACTCCGTTGGTATTaGCCCAGACTGTCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FFSPGTPQKVVCTDKSVDRLRWY*PRLSSR Trigger: CCTGGAGGACAGTCTGGGGCAATACCAACGGAGTCT...GTCCACACTCTTGTCTGTGCAGACAACTTTCTGCGGAGTCCCGGGAGAGAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS-3UTR GCA 90 bp | TCAGATTGTGGCATGCTGGGTAACTGCGCTCGCAGCCGGGCCACTTCCTCAGACCAGTGGATGCAGTTTTaGCAGTTTCAGCATCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: SDCGMLGNCARSRATSSDQWMQF*QFQHHH Trigger: ATGGTGATGCTGAAACTGGCAAAACTGCATCCACTG...GTCTGAGGAAGTGGCCCGGCTGCGAGCGCAGTTACCCAGCATGCCACAATCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| CDS-3UTR GCA 90 bp | TCCCGGGACTCCGCAGAAAGTTGTCTGCACAGACAAGAGTGTGGACCACAGAAGGCTTCCTCTGTCATCTaGACAGCATGCTTCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRDSAESCLHRQECGPQKASSVI*TACFTC Trigger: GCAGGTGAAGCATGCTGTGCAGATGACAGAGGAAGC...CTTCTGTGGTCCACACTCTTGTCTGTGCAGACAACTTTCTGCGGAGTCCCGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS-3UTR CCA 90 bp | ACGAGCCCTAGCCAGTTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGGTGACCTTTTCAACCTaGGCCTCCAGCTTGGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: TSPSQLMLKQALPVHSTGVTFST*ASSLAI Trigger: TATTGCCAAGCTGGAGGCCCAGGTTGAAAAGGTCAC...CCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAACTGGCTAGGGCTCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS-3UTR TCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGGCCCTCTTTTCTTGCTaGGAGGCAAGCTCCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMALFSC*EASSFS Trigger: GGAAAAGGAGCTTGCCTCTCAGCAAGAAAAGAGGGC...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS-3UTR GCA 90 bp | GCGCATTTCTCCACACACCTTTGTGACGTCCATTTCCTGAGACGCAACGTGGTTAGACTCCGTTGGTATTaGCCCAGACTGTCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AHFSTHLCDVHFLRRNVVRLRWY*PRLSSR Trigger: CCTGGAGGACAGTCTGGGGCAATACCAACGGAGTCT...AACCACGTTGCGTCTCAGGAAATGGACGTCACAAAGGTGTGTGGAGAAATGCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| CDS-3UTR GCA 90 bp | ACGAGCCCTAGCCAGTTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGGGTGGAAGGATCCAGTaGATCTTCTTCTACAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: TSPSQLMLKQALPVHSTGGGRIQ*IFFYSD Trigger: GTCACTGTAGAAGAAGATGCACTGGATCCTTCCACC...CCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAACTGGCTAGGGCTCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS-3UTR GCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGATAGGAACGAGGTTGTaGATGGTGGGCATGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMIGTRL*MVGMLP Trigger: TGGCAGCATGCCCACCATGCACAACCTCGTTCCTAT...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS-3UTR GCA 90 bp | ACGAGCCCTAGCCAGTTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGTCTGGATGTGCACGTTaGTGTGTGTCTGGGAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TSPSQLMLKQALPVHSTGSGCAR*CVSGKE Trigger: TTCTTTCCCAGACACACAGCAACGTGCACATCCAGA...CCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAACTGGCTAGGGCTCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS-3UTR GCA 90 bp | ACGAGCCCTAGCCAGTTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGCCCTCCCATGTTGGATaGATTGCTCTTCTAGTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: TSPSQLMLKQALPVHSTGPSHVG*IALLVR Trigger: ACGAACTAGAAGAGCAATGCATCCAACATGGGAGGG...CCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAACTGGCTAGGGCTCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS-3UTR CCA 90 bp | ACTGCGCTCGCAGCCGGGCCACTTCCTCAGACAGGTTCTGTCGCTCCAGGAGAAATCACCATGAGAAAATaGTCTCTTTGCAGCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TALAAGPLPQTGSVAPGEITMRK*SLCSFI Trigger: GATGAAGCTGCAAAGAGACCATTTTCTCATGGTGAT...TTCTCCTGGAGCGACAGAACCTGTCTGAGGAAGTGGCCCGGCTGCGAGCGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| CDS-3UTR CCA 90 bp | ACGAGCCCTAGCCAGTTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACGTTGCTGTGTGTCTaGGAAAGAACAGCTTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: TSPSQLMLKQALPVHSTGTLLCV*ERTASC Trigger: GCATGAAGCTGTTCTTTCCCAGACACACAGCAACGT...CCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAACTGGCTAGGGCTCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS-3UTR TCA 90 bp | CTGCTTGTTAAGCAACTGCACCAGCTGCTGCGCTGTAGCCTGGCCGTGCTTATCGCACATTTCAACTGGTaGATGCTTCTATTGGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: LLVKQLHQLLRCSLAVLIAHFNW*MLLLAR Trigger: ACGTGCCAATAGAAGCATTCACCAGTTGAAATGTGC...GATAAGCACGGCCAGGCTACAGCGCAGCAGCTGGTGCAGTTGCTTAACAAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| CDS-3UTR TCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGCGCTCCAGGAGAAGCTaGTTCTGCTTGTTAAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMRSRRS*FCLLSN Trigger: GTTGCTTAACAAGCAGAATCAGCTTCTCCTGGAGCG...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS-3UTR GCA 90 bp | TCTCTCCCGGGACTCCGCAGAAAGTTGTCTGCACAGACAAGAGTGTGGACCACAGGTGGAAGGATCCAGTaGATCTTCTTCTACAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLPGLRRKLSAQTRVWTTGGRIQ*IFFYSD Trigger: GTCACTGTAGAAGAAGATGCACTGGATCCTTCCACC...TGTGGTCCACACTCTTGTCTGTGCAGACAACTTTCTGCGGAGTCCCGGGAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS-3UTR GCA 90 bp | GCGCATTTCTCCACACACCTTTGTGACGTCCATTTCCTGAGACGCAACGTGGTTATAGGAACGAGGTTGTaGATGGTGGGCATGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AHFSTHLCDVHFLRRNVVIGTRL*MVGMLP Trigger: TGGCAGCATGCCCACCATGCACAACCTCGTTCCTAT...AACCACGTTGCGTCTCAGGAAATGGACGTCACAAAGGTGTGTGGAGAAATGCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| CDS-3UTR GCA 90 bp | ACGAGCCCTAGCCAGTTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGCTGCATGTTTCCAGATaGATCCAGGAATGTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TSPSQLMLKQALPVHSTGLHVSR*IQECLL Trigger: GAGCAAACATTCCTGGATGCATCTGGAAACATGCAG...CCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAACTGGCTAGGGCTCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS-3UTR GCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGGGCATCACCAGTGGATaGAGTTTTGCCAGTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMGITSG*SFASFS Trigger: GCTGAAACTGGCAAAACTGCATCCACTGGTGATGCC...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCCGGGACTCCGCAGAAAGTTGTCTGCACAGACAAGAGTGTGGACCACAGATCTGGATGTGCACGTTaGTGTGTGTCTGGGAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SPGTPQKVVCTDKSVDHRSGCAR*CVSGKE Trigger: TTCTTTCCCAGACACACAGCAACGTGCACATCCAGA...TCTGTGGTCCACACTCTTGTCTGTGCAGACAACTTTCTGCGGAGTCCCGGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS-3UTR GCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGAGCTCACTCTTCAGCTaGTCACACTGGATCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMSSLFS*SHWIKA Trigger: GGCTTTGATCCAGTGTGAGCAGCTGAAGAGTGAGCT...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS-3UTR GCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGTCCTTCATGGTCTCATaGACCCTCCCATGTTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMSFMVS*TLPCWM Trigger: CATCCAACATGGGAGGGTGCATGAGACCATGAAGGA...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS-3UTR GCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGCCGTGCTTATCCAGCTaGCTGAGTCTTTCCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMPCLSS*LSLSFM Trigger: CATGAAGGAAAGACTCAGGCAGCTGGATAAGCACGG...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS-3UTR GCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGAATCAGATTGTGGCATaGTGGGTAACTGCGCTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMNQIVA*WVTALA Trigger: TGCGAGCGCAGTTACCCAGCATGCCACAATCTGATT...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS-3UTR CCA 90 bp | CTCGCAGCCGGGCCACTTCCTCAGACAGGTTCTGTCGCTCCAGGAGAAGCTGATTCCTCACAGGTTTTCTaGTATTCAGCTAAGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LAAGPLPQTGSVAPGEADSSQVF*YSAKSF Trigger: GAAAGACTTAGCTGAATACCAGAAAACCTGTGAGGA...ATCAGCTTCTCCTGGAGCGACAGAACCTGTCTGAGGAAGTGGCCCGGCTGCGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCCGGGACTCCGCAGAAAGTTGTCTGCACAGACAAGAGTGTGGACCACAGAACGTTGCTGTGTGTCTaGGAAAGAACAGCTTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: SPGTPQKVVCTDKSVDHRTLLCV*ERTASC Trigger: GCATGAAGCTGTTCTTTCCCAGACACACAGCAACGT...TCTGTGGTCCACACTCTTGTCTGTGCAGACAACTTTCTGCGGAGTCCCGGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS-3UTR TCA 90 bp | AAATTCTTCTCTCCCGGGACTCCGCAGAAAGTTGTCTGCACAGACAAGAGTGTGTCTTCGCCTCGTATGTaGGTTTCAGCCTCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KFFSPGTPQKVVCTDKSVSSPRM*VSASPA Trigger: AGCTGGAGAGGCTGAAACTCACATACGAGGCGAAGA...CACACTCTTGTCTGTGCAGACAACTTTCTGCGGAGTCCCGGGAGAGAAGAATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS-3UTR TCA 90 bp | TCACTCTGTTTCATCCAGGTCAGCAATCAGATTGTGGCATGCTGGGTAACTGCGTCTTCGCCTCGTATGTaGGTTTCAGCCTCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLCFIQVSNQIVACWVTASSPRM*VSASPA Trigger: AGCTGGAGAGGCTGAAACTCACATACGAGGCGAAGA...CGCAGTTACCCAGCATGCCACAATCTGATTGCTGACCTGGATGAAACAGAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| CDS-3UTR TCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGCAGGATCAACATCTTTaGCTCTGCATCTTCCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMQDQHL*LCIFPL Trigger: GAGAGGGAAGATGCAGAGTCAAAGATGTTGATCCTG...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS-3UTR GCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGGGTGGAAGGATCCAGTaGATCTTCTTCTACAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMGGRIQ*IFFYSD Trigger: GTCACTGTAGAAGAAGATGCACTGGATCCTTCCACC...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS-3UTR GCA 90 bp | TCTCTCCCGGGACTCCGCAGAAAGTTGTCTGCACAGACAAGAGTGTGGACCACACTGCATGTTTCCAGATaGATCCAGGAATGTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLPGLRRKLSAQTRVWTTLHVSR*IQECLL Trigger: GAGCAAACATTCCTGGATGCATCTGGAAACATGCAG...TGTGGTCCACACTCTTGTCTGTGCAGACAACTTTCTGCGGAGTCCCGGGAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS-3UTR GCA 90 bp | ACGAGCCCTAGCCAGTTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGAGAAAATGGTCTCTTTaGAGCTTCATCCACCCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TSPSQLMLKQALPVHSTGRKWSL*SFIHPR Trigger: TCTAGGGTGGATGAAGCTGCAAAGAGACCATTTTCT...CCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAACTGGCTAGGGCTCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTTGTTAAGCAACTGCACCAGCTGCTGCGCTGTAGCCTGGCCGTGCTTATCTATTGGCATCACCAGTaGATGCAGTTTTGCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLVKQLHQLLRCSLAVLIYWHHQ*MQFCQF Trigger: AAACTGGCAAAACTGCATCCACTGGTGATGCCAATA...GATAAGCACGGCCAGGCTACAGCGCAGCAGCTGGTGCAGTTGCTTAACAAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTCCCGGGACTCCGCAGAAAGTTGTCTGCACAGACAAGAGTGTGGACCACATGGTCTTCTCAAAGTTaGCTTCCTCTGTCATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLPGLRRKLSAQTRVWTTWSSQS*LPLSSA Trigger: TGCAGATGACAGAGGAAGCCAACTTTGAGAAGACCA...TGTGGTCCACACTCTTGTCTGTGCAGACAACTTTCTGCGGAGTCCCGGGAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS-3UTR CCA 90 bp | ACGAGCCCTAGCCAGTTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACTGGATCAAAGCCTTaGTCTTCTCAAAGTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TSPSQLMLKQALPVHSTGTGSKP*SSQSWL Trigger: AAGCCAACTTTGAGAAGACCAAGGCTTTGATCCAGT...CCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAACTGGCTAGGGCTCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS-3UTR CCA 90 bp | ACGAGCCCTAGCCAGTTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGCAAGGGATACAGTCTTaGTCTTCTCAAAGTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TSPSQLMLKQALPVHSTGQGIQS*SSQSWL Trigger: AAGCCAACTTTGAGAAGACCAAGACTGTATCCCTTG...CCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAACTGGCTAGGGCTCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| CDS-3UTR TCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGGCACATTTCAACTGGTaGATGCTTCTATTGGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMAHFNW*MLLLAR Trigger: ACGTGCCAATAGAAGCATTCACCAGTTGAAATGTGC...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS-3UTR TCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGAACAAAGCTTTCAGTTaGTTGACAGCATGGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMNKAFS*LTAWLC Trigger: GCACAGCCATGCTGTCAATCAACTGAAAGCTTTGTT...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS-3UTR TCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGCATCCTTGCAGAACTTaGCTTCTGCTTCTAAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMHPCRT*LLLLSG Trigger: ACCACTTAGAAGCAGAAGTCAAGTTCTGCAAGGATG...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS-3UTR TCA 90 bp | ACGAGCCCTAGCCAGTTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGAGCTTGGCAATATTCTaGGACAGGATCAACATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TSPSQLMLKQALPVHSTGSLAIF*DRINIF Trigger: AAAGATGTTGATCCTGTCTCAGAATATTGCCAAGCT...CCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAACTGGCTAGGGCTCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS-3UTR GCA 90 bp | CTCCCGGGACTCCGCAGAAAGTTGTCTGCACAGACAAGAGTGTGGACCACAGAAAGAAAATGGTCTCTTTaGAGCTTCATCCACCCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPGLRRKLSAQTRVWTTERKWSL*SFIHPR Trigger: TCTAGGGTGGATGAAGCTGCAAAGAGACCATTTTCT...TTCTGTGGTCCACACTCTTGTCTGTGCAGACAACTTTCTGCGGAGTCCCGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS-3UTR GCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGCAGTGGATGCAGTTTTaGCAGTTTCAGCATCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMQWMQF*QFQHHH Trigger: ATGGTGATGCTGAAACTGGCAAAACTGCATCCACTG...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTCTCTCCCGGGACTCCGCAGAAAGTTGTCTGCACAGACAAGAGTGTGGACCAGTGGATGCAGTTTTaGCAGTTTCAGCATCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: FFSPGTPQKVVCTDKSVDQWMQF*QFQHHH Trigger: ATGGTGATGCTGAAACTGGCAAAACTGCATCCACTG...GTCCACACTCTTGTCTGTGCAGACAACTTTCTGCGGAGTCCCGGGAGAGAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS-3UTR GCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGAAGGGCTTGGGCCTTTaGTTCATTGCTAAAGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMKGLGL*FIAKAL Trigger: CAAAGCTTTAGCAATGAAGCAAAGGCCCAAGCCCTT...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS-3UTR GCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGCTTTCAGTTTTGTCGTaGTGGGTCTCCATTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMLSVLS*WVSICC Trigger: ACAGCAAATGGAGACCCAGCACGACAAAACTGAAAG...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS-3UTR CCA 90 bp | ACGAGCCCTAGCCAGTTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGATCACCATGAGAAAATaGTCTCTTTGCAGCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TSPSQLMLKQALPVHSTGITMRK*SLCSFI Trigger: GATGAAGCTGCAAAGAGACCATTTTCTCATGGTGAT...CCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAACTGGCTAGGGCTCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS-3UTR CCA 90 bp | ACGAGCCCTAGCCAGTTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGTCCTCACAGGTTTTCTaGTATTCAGCTAAGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TSPSQLMLKQALPVHSTGSSQVF*YSAKSF Trigger: GAAAGACTTAGCTGAATACCAGAAAACCTGTGAGGA...CCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAACTGGCTAGGGCTCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS-3UTR CCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGTGGTCTTCTCAAAGTTaGCTTCCTCTGTCATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMWSSQS*LPLSSA Trigger: TGCAGATGACAGAGGAAGCCAACTTTGAGAAGACCA...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS-3UTR TCA 90 bp | ATTCTTCTCTCCCGGGACTCCGCAGAAAGTTGTCTGCACAGACAAGAGTGTGGAAACAAAGCTTTCAGTTaGTTGACAGCATGGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ILLSRDSAESCLHRQECGNKAFS*LTAWLC Trigger: GCACAGCCATGCTGTCAATCAACTGAAAGCTTTGTT...TCCACACTCTTGTCTGTGCAGACAACTTTCTGCGGAGTCCCGGGAGAGAAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS-3UTR GCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGATTTCAACTGGTGAATaGTTCTATTGGCACGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMISTGE*FYWHVP Trigger: GGGAACGTGCCAATAGAAGCATTCACCAGTTGAAAT...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS-3UTR GCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGAGAAAATGGTCTCTTTaGAGCTTCATCCACCCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMRKWSL*SFIHPR Trigger: TCTAGGGTGGATGAAGCTGCAAAGAGACCATTTTCT...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS-3UTR CCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGTATTGGCATCACCAGTaGATGCAGTTTTGCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMYWHHQ*MQFCQF Trigger: AAACTGGCAAAACTGCATCCACTGGTGATGCCAATA...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCTCTCCCGGGACTCCGCAGAAAGTTGTCTGCACAGACAAGAGTGTGGACCTCCTCACAGGTTTTCTaGTATTCAGCTAAGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSLPGLRRKLSAQTRVWTSSQVF*YSAKSF Trigger: GAAAGACTTAGCTGAATACCAGAAAACCTGTGAGGA...GGTCCACACTCTTGTCTGTGCAGACAACTTTCTGCGGAGTCCCGGGAGAGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS-3UTR TCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGTTGGTTTTATTCAACTaGAAGCGCATTTCTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMLVLFN*KRISPH Trigger: GTGTGGAGAAATGCGCTTTCAGTTGAATAAAACCAA...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS-3UTR GCA 90 bp | CTGCTTGTTAAGCAACTGCACCAGCTGCTGCGCTGTAGCCTGGCCGTGCTTATCTCAAGTACAACTACTTaGACCCTATTTTTCATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLVKQLHQLLRCSLAVLISSTTT*TLFFIP Trigger: TGGAATGAAAAATAGGGTGCAAGTAGTTGTACTTGA...GATAAGCACGGCCAGGCTACAGCGCAGCAGCTGGTGCAGTTGCTTAACAAGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| CDS-3UTR GCA 90 bp | GCCTTCTGCTGCTCCTGTTCCACATGCTGCTCGCTTTCGCTCAGTTCTAGTCTCATAATCCAAGAATTCTaGATGTTTCCAGATGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: AFCCSCSTCCSLSLSSSLIIQEF*MFPDAS Trigger: GGATGCATCTGGAAACATGCAGAATTCTTGGATTAT...GAGACTAGAACTGAGCGAAAGCGAGCAGCATGTGGAACAGGAGCAGCAGAAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCCACACACCTTTGTGACGTCCATTTCCTGAGACGCAACGTGGTTCTGAATTCTGGATGTGCACGTTaGTGTGTGTCTGGGAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FSTHLCDVHFLRRNVVLNSGCAR*CVSGKE Trigger: TTCTTTCCCAGACACACAGCAACGTGCACATCCAGA...ATTCAGAACCACGTTGCGTCTCAGGAAATGGACGTCACAAAGGTGTGTGGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| CDS-3UTR GCA 90 bp | TTTAAAAATTCTTCTCTCCCGGGACTCCGCAGAAAGTTGTCTGCACAGACAAGACTTGTCTCTCTCTTCTaGGCTTCTGCCAAGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FKNSSLPGLRRKLSAQTRLVSLF*ASAKLL Trigger: GAGCAGCTTGGCAGAAGCGCAGAAGAGAGAGACAAG...TCTTGTCTGTGCAGACAACTTTCTGCGGAGTCCCGGGAGAGAAGAATTTTTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS-3UTR TCA 90 bp | TTCTCCACACACCTTTGTGACGTCCATTTCCTGAGACGCAACGTGGTTCTGAATCATCCTTGCAGAACTTaGCTTCTGCTTCTAAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FSTHLCDVHFLRRNVVLNHPCRT*LLLLSG Trigger: ACCACTTAGAAGCAGAAGTCAAGTTCTGCAAGGATG...ATTCAGAACCACGTTGCGTCTCAGGAAATGGACGTCACAAAGGTGTGTGGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| CDS-3UTR GCA 90 bp | TCCCGGGACTCCGCAGAAAGTTGTCTGCACAGACAAGAGTGTGGACCACAGAAGTCAAGTACAACTACTTaGACCCTATTTTTCATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRDSAESCLHRQECGPQKSSTTT*TLFFIP Trigger: TGGAATGAAAAATAGGGTGCAAGTAGTTGTACTTGA...CTTCTGTGGTCCACACTCTTGTCTGTGCAGACAACTTTCTGCGGAGTCCCGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS-3UTR GCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGATAATCCAAGAATTCTaGATGTTTCCAGATGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMIIQEF*MFPDAS Trigger: GGATGCATCTGGAAACATGCAGAATTCTTGGATTAT...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS-3UTR GCA 90 bp | TTTAAAAATTCTTCTCTCCCGGGACTCCGCAGAAAGTTGTCTGCACAGACAAGAGGCATCACCAGTGGATaGAGTTTTGCCAGTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FKNSSLPGLRRKLSAQTRGITSG*SFASFS Trigger: GCTGAAACTGGCAAAACTGCATCCACTGGTGATGCC...TCTTGTCTGTGCAGACAACTTTCTGCGGAGTCCCGGGAGAGAAGAATTTTTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS-3UTR GCA 90 bp | CTGAAGGGCTTGGGCCTTTGCTTCATTGCTAAAGCTTTGCTGAATGCTATCTTTGGCATCACCAGTGGATaGAGTTTTGCCAGTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LKGLGLCFIAKALLNAIFGITSG*SFASFS Trigger: GCTGAAACTGGCAAAACTGCATCCACTGGTGATGCC...AAAGATAGCATTCAGCAAAGCTTTAGCAATGAAGCAAAGGCCCAAGCCCTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| CDS-3UTR GCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGATCCTTGTGAGACTTTaGTTTGTATTCTCTGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMILVRL*FVFSVF Trigger: GAACACAGAGAATACAAAGCAAAGTCTCACAAGGAT...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| 3UTR CAA 72 bp | CTGAAGGGCTTGGGCCTTTGCTTCATTGCTAAAGCTTaGCTGAATGCTATCTTTTTCCAGTCTGGTGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LKGLGLCFIAKA*LNAIFFQSGEV Trigger: CACCTCACCAGACTGGAAAAAGATAGCATTCAGCAAAGCTTTAGCAATGAAGCAAAGGCCCAAGCCCTTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| 3UTR CAA 72 bp | CTGTTCACTTTCAGTTTTGTCGTGCTGGGTCTCCATTaGCTGTATCTTCTGTGTCAGCTCCTGTTCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFTFSFVVLGLH*LYLLCQLLFSL Trigger: CAGAGAGAACAGGAGCTGACACAGAAGATACAGCAAATGGAGACCCAGCACGACAAAACTGAAAGTGAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| CDS-3UTR GCA 90 bp | AAAAATTCTTCTCTCCCGGGACTCCGCAGAAAGTTGTCTGCACAGACAAGAGTGATTTCAACTGGTGAATaGTTCTATTGGCACGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KNSSLPGLRRKLSAQTRVISTGE*FYWHVP Trigger: GGGAACGTGCCAATAGAAGCATTCACCAGTTGAAAT...CACTCTTGTCTGTGCAGACAACTTTCTGCGGAGTCCCGGGAGAGAAGAATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS-3UTR GCA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGTCAAGTACAACTACTTaGACCCTATTTTTCATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LMLKQALPVHSTGTDHGMSSTTT*TLFFIP Trigger: TGGAATGAAAAATAGGGTGCAAGTAGTTGTACTTGA...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS-3UTR CCA 90 bp | AAAAATTCTTCTCTCCCGGGACTCCGCAGAAAGTTGTCTGCACAGACAAGAGTGTATTGGCATCACCAGTaGATGCAGTTTTGCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KNSSLPGLRRKLSAQTRVYWHHQ*MQFCQF Trigger: AAACTGGCAAAACTGCATCCACTGGTGATGCCAATA...CACTCTTGTCTGTGCAGACAACTTTCTGCGGAGTCCCGGGAGAGAAGAATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
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| CDS-3UTR TCA 90 bp | TTTTTAAAAATTCTTCTCTCCCGGGACTCCGCAGAAAGTTGTCTGCACAGACAAGCACATTTCAACTGGTaGATGCTTCTATTGGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: FLKILLSRDSAESCLHRQAHFNW*MLLLAR Trigger: ACGTGCCAATAGAAGCATTCACCAGTTGAAATGTGC...TTGTCTGTGCAGACAACTTTCTGCGGAGTCCCGGGAGAGAAGAATTTTTAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS-3UTR CCA 90 bp | TTTAAAAATTCTTCTCTCCCGGGACTCCGCAGAAAGTTGTCTGCACAGACAAGAATCACCATGAGAAAATaGTCTCTTTGCAGCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: FKNSSLPGLRRKLSAQTRITMRK*SLCSFI Trigger: GATGAAGCTGCAAAGAGACCATTTTCTCATGGTGAT...TCTTGTCTGTGCAGACAACTTTCTGCGGAGTCCCGGGAGAGAAGAATTTTTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS-3UTR GCA 90 bp | TTTAAAAATTCTTCTCTCCCGGGACTCCGCAGAAAGTTGTCTGCACAGACAAGAATAATCCAAGAATTCTaGATGTTTCCAGATGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: FKNSSLPGLRRKLSAQTRIIQEF*MFPDAS Trigger: GGATGCATCTGGAAACATGCAGAATTCTTGGATTAT...TCTTGTCTGTGCAGACAACTTTCTGCGGAGTCCCGGGAGAGAAGAATTTTTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS GCA 90 bp | CCTTCCAGGCGAGAGGACAGGGGCCCTCCTGGCCCTGGAGGTTTTTaGCTCAGGATCTGCGGAAGCGATCTTGGTTCCGGAACTCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: PSRREDRGPPGPGGF*LRICGSDLGSGTPQ Trigger: CTGTGGAGTTCCGGAACCAAGATCGCTTCCGCAGATCCTGAGGCAAAAACCTCCAGGGCCAGGAGGGCCCCTGTCCTCTCGCCTGGAAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS-3UTR CAA 90 bp | ACGAGCCCTAGCCAGTTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGTCTGGTGAGGTGCAGTaGGCGCTCGGCCTCGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TSPSQLMLKQALPVHSTGSGEVQ*ALGLAQ Trigger: CTGGGCGAGGCCGAGCGCCAACTGCACCTCACCAGA...CCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAACTGGCTAGGGCTCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS-3UTR CAA 90 bp | GGCCTCGCCCAGCAGCTCTGTGACTCGCAGGCACTCCTGTCTGGCCCGAGCTGCTCATCCTTGCAGAACTaGACTTCTGCTTCTAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GLAQQLCDSQALLSGPSCSSLQN*TSASKW Trigger: CCACTTAGAAGCAGAAGTCAAGTTCTGCAAGGATGA...GCAGCTCGGGCCAGACAGGAGTGCCTGCGAGTCACAGAGCTGCTGGGCGAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| CDS GCA 90 bp | GAGGACAGGGGCCCTCCTGGCCCTGGAGGTTTTTGCCTCAGGATCTaGGGAAGCGATCTTGGTTCCGGAACTCCACAGAAAGTAGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: EDRGPPGPGGFCLRI*GSDLGSGTPQKVVL Trigger: CAAGACTACTTTCTGTGGAGTTCCGGAACCAAGATCGCTTCCGCAGATCCTGAGGCAAAAACCTCCAGGGCCAGGAGGGCCCCTGTCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS-3UTR CAA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGGAGACTCCGTTGGTATaGCCCCAGACTGTCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LMLKQALPVHSTGTDHGMETPLV*PQTVLQ Trigger: CTGGAGGACAGTCTGGGGCAATACCAACGGAGTCTC...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS-3UTR CAA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGTTCCCGGAGACTCCGTaGGTATTGCCCCAGACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LMLKQALPVHSTGTDHGMFPETP*VLPQTV Trigger: GACAGTCTGGGGCAATACCAACGGAGTCTCCGGGAA...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
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| CDS-3UTR CAA 90 bp | ACGAGCCCTAGCCAGTTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGGTCTGGATGTGCACGTaGCTGTGTGTCTGGGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: TSPSQLMLKQALPVHSTGVWMCT*LCVWER Trigger: TCTTTCCCAGACACACAGCAACGTGCACATCCAGAC...CCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAACTGGCTAGGGCTCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
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| CDS-3UTR CAA 90 bp | ACGAGCCCTAGCCAGTTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGCACAGCCCTCTTTTCTaGCTGAGAGGCAAGCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TSPSQLMLKQALPVHSTGHSPLF*LRGKLL Trigger: AAGGAGCTTGCCTCTCAGCAAGAAAAGAGGGCTGTG...CCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAACTGGCTAGGGCTCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS-3UTR CAA 90 bp | CTCGCAGCCGGGCCACTTCCTCAGACAGGTTCTGTCGCTCCAGGAGAAGCTGATGCAAGGGATACAGTCTaGGTCTTCTCAAAGTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LAAGPLPQTGSVAPGEADARDTV*VFSKLA Trigger: AGCCAACTTTGAGAAGACCAAGACTGTATCCCTTGC...ATCAGCTTCTCCTGGAGCGACAGAACCTGTCTGAGGAAGTGGCCCGGCTGCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| CDS-3UTR CAA 90 bp | AATTCTTCTCTCCCGGGACTCCGCAGAAAGTTGTCTGCACAGACAAGAGTGTGGTTCCCGGAGACTCCGTaGGTATTGCCCCAGACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: NSSLPGLRRKLSAQTRVWFPETP*VLPQTV Trigger: GACAGTCTGGGGCAATACCAACGGAGTCTCCGGGAA...CCACACTCTTGTCTGTGCAGACAACTTTCTGCGGAGTCCCGGGAGAGAAGAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS-3UTR CAA 90 bp | CTCGCAGCCGGGCCACTTCCTCAGACAGGTTCTGTCGCTCCAGGAGAAGCTGATCAACAAAGCTTTCAGTaGATTGACAGCATGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LAAGPLPQTGSVAPGEADQQSFQ*IDSMAV Trigger: CACAGCCATGCTGTCAATCAACTGAAAGCTTTGTTG...ATCAGCTTCTCCTGGAGCGACAGAACCTGTCTGAGGAAGTGGCCCGGCTGCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| CDS-3UTR CAA 90 bp | CTTCTCTCCCGGGACTCCGCAGAAAGTTGTCTGCACAGACAAGAGTGTGGACCAGTCTGGATGTGCACGTaGCTGTGTGTCTGGGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLSRDSAESCLHRQECGPVWMCT*LCVWER Trigger: TCTTTCCCAGACACACAGCAACGTGCACATCCAGAC...TGGTCCACACTCTTGTCTGTGCAGACAACTTTCTGCGGAGTCCCGGGAGAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS-3UTR CAA 90 bp | ACGAGCCCTAGCCAGTTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGGTGCTGGGTCTCCATTaGCTGTATCTTCTGTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: TSPSQLMLKQALPVHSTGVLGLH*LYLLCQ Trigger: CTGACACAGAAGATACAGCAAATGGAGACCCAGCAC...CCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAACTGGCTAGGGCTCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS TCA 90 bp | TGGATGTGCACGTTGCTGTGTGTCTGGGAAAGAACAGCTTCATGCTaGGCACATTTCAAACAGAGGCCACCCACACGGCTGGATGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: WMCTLLCVWERTASC*AHFKQRPPTRLDAL Trigger: GAGTGCATCCAGCCGTGTGGGTGGCCTCTGTTTGAAATGTGCTCAGCATGAAGCTGTTCTTTCCCAGACACACAGCAACGTGCACATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
||
| CDS-3UTR CAA 90 bp | AAATTCTTCTCTCCCGGGACTCCGCAGAAAGTTGTCTGCACAGACAAGAGTGTGGAGACTCCGTTGGTATaGCCCCAGACTGTCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KFFSPGTPQKVVCTDKSVETPLV*PQTVLQ Trigger: CTGGAGGACAGTCTGGGGCAATACCAACGGAGTCTC...CACACTCTTGTCTGTGCAGACAACTTTCTGCGGAGTCCCGGGAGAGAAGAATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS-3UTR CAA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGATGATAGGAACGAGGTaGTGCATGGTGGGCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LMLKQALPVHSTGTDHGMMIGTR*CMVGML Trigger: CAGCATGCCCACCATGCACAACCTCGTTCCTATCAT...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS-3UTR CAA 90 bp | ACGAGCCCTAGCCAGTTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGCACTGGATCAAAGCCTaGGTCTTCTCAAAGTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TSPSQLMLKQALPVHSTGHWIKA*VFSKLA Trigger: AGCCAACTTTGAGAAGACCAAGGCTTTGATCCAGTG...CCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAACTGGCTAGGGCTCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS-3UTR CAA 90 bp | ACGAGCCCTAGCCAGTTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGCAACAAAGCTTTCAGTaGATTGACAGCATGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TSPSQLMLKQALPVHSTGQQSFQ*IDSMAV Trigger: CACAGCCATGCTGTCAATCAACTGAAAGCTTTGTTG...CCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAACTGGCTAGGGCTCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS-3UTR CAA 90 bp | ACGAGCCCTAGCCAGTTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGTCATCCTTGCAGAACTaGACTTCTGCTTCTAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TSPSQLMLKQALPVHSTGSSLQN*TSASKW Trigger: CCACTTAGAAGCAGAAGTCAAGTTCTGCAAGGATGA...CCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAACTGGCTAGGGCTCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS GCA 90 bp | CCTGCTCATAGGCACTTGTCTCTCTCTTCTGCGCTTCTGCCAAGCTaGTCCGCACAGAGACTAGCACAGACATTAAGTCATCTCTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PAHRHLSLSSALLPS*SAQRLAQTLSHLSL Trigger: AAGAGAGAGATGACTTAATGTCTGTGCTAGTCTCTGTGCGGAGCAGCTTGGCAGAAGCGCAGAAGAGAGAGACAAGTGCCTATGAGCAGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCTCCCGGGACTCCGCAGAAAGTTGTCTGCACAGACAAGAGTGTGGACCACCAACAAAGCTTTCAGTaGATTGACAGCATGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: FSPGTPQKVVCTDKSVDHQQSFQ*IDSMAV Trigger: CACAGCCATGCTGTCAATCAACTGAAAGCTTTGTTG...GTGGTCCACACTCTTGTCTGTGCAGACAACTTTCTGCGGAGTCCCGGGAGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS-3UTR CAA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGTCCAGCTTCCATTTATaGGCATCACCAGTGGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: LMLKQALPVHSTGTDHGMSSFHL*ASPVDA Trigger: TGCATCCACTGGTGATGCCAATAAATGGAAGCTGGA...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS-3UTR CAA 90 bp | TCACTCTGTTTCATCCAGGTCAGCAATCAGATTGTGGCATGCTGGGTAACTGCGGTCTGGATGTGCACGTaGCTGTGTGTCTGGGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLCFIQVSNQIVACWVTAVWMCT*LCVWER Trigger: TCTTTCCCAGACACACAGCAACGTGCACATCCAGAC...CGCAGTTACCCAGCATGCCACAATCTGATTGCTGACCTGGATGAAACAGAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| CDS-3UTR CAA 90 bp | ACGAGCCCTAGCCAGTTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACCTTTTCCAGTTTCTaGGCTAACAAGCAGCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: TSPSQLMLKQALPVHSTGTFSSF*ANKQHS Trigger: AGAATGCTGCTTGTTAGCCAAGAAACTGGAAAAGGT...CCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAACTGGCTAGGGCTCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS-3UTR CAA 90 bp | TCTTCTCTCCCGGGACTCCGCAGAAAGTTGTCTGCACAGACAAGAGTGTGGACCCCACAGAAAGTAGTCTaGGTCTTCTCAAAGTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSLPGLRRKLSAQTRVWTPQKVV*VFSKLA Trigger: AGCCAACTTTGAGAAGACCAAGACTACTTTCTGTGG...GGTCCACACTCTTGTCTGTGCAGACAACTTTCTGCGGAGTCCCGGGAGAGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS CCA 90 bp | CAGCTTCATGCTGAGCACATTTCAAACAGAGGCCACCCACACGGCTaGATGCACTCGCAGCCAGAAGAGACTCTTTATGCTTCAATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: QLHAEHISNRGHPHG*MHSQPEETLYASIF Trigger: AAAGATTGAAGCATAAAGAGTCTCTTCTGGCTGCGAGTGCATCCAGCCGTGTGGGTGGCCTCTGTTTGAAATGTGCTCAGCATGAAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
||
| CDS-3UTR CAA 90 bp | ACGAGCCCTAGCCAGTTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGGATCCTTGTGAGACTTaGCTTTGTATTCTCTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: TSPSQLMLKQALPVHSTGDPCET*LCILCV Trigger: AACACAGAGAATACAAAGCAAAGTCTCACAAGGATC...CCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAACTGGCTAGGGCTCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS TCA 90 bp | TCTTCTACAGTGACATCCACTTCTCTCAGGGCACATTTCAACTGGTaGATGCTTCTATTGGCACGTTCCCGGAGACTCCGTTGGTATTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSTVTSTSLRAHFNW*MLLLARSRRLRWYC Trigger: GCAATACCAACGGAGTCTCCGGGAACGTGCCAATAGAAGCATTCACCAGTTGAAATGTGCCCTGAGAGAAGTGGATGTCACTGTAGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
||
| CDS GCA 90 bp | TTCATGCTGAGCACATTTCAAACAGAGGCCACCCACACGGCTGGATaGACTCGCAGCCAGAAGAGACTCTTTATGCTTCAATCTTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: FMLSTFQTEATHTAG*TRSQKRLFMLQSFL Trigger: AAGGAAAGATTGAAGCATAAAGAGTCTCTTCTGGCTGCGAGTGCATCCAGCCGTGTGGGTGGCCTCTGTTTGAAATGTGCTCAGCATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
||
| CDS-3UTR CAA 90 bp | AAATTCTTCTCTCCCGGGACTCCGCAGAAAGTTGTCTGCACAGACAAGAGTGTGTCCAGCTTCCATTTATaGGCATCACCAGTGGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: KFFSPGTPQKVVCTDKSVSSFHL*ASPVDA Trigger: TGCATCCACTGGTGATGCCAATAAATGGAAGCTGGA...CACACTCTTGTCTGTGCAGACAACTTTCTGCGGAGTCCCGGGAGAGAAGAATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS GCA 90 bp | CAGCCTCTCCAGCTCCAGCTTCCATTTATTGGCATCACCAGTGGATaGAGTTTTGCCAGTTTCAGCATCACCATGAGAAAATGGTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QPLQLQLPFIGITSG*SFASFSITMRKWSL Trigger: AAGAGACCATTTTCTCATGGTGATGCTGAAACTGGCAAAACTGCATCCACTGGTGATGCCAATAAATGGAAGCTGGAGCTGGAGAGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
||
| CDS CCA 90 bp | ACAGACATTAAGTCATCTCTCTCTTTAGTCAGCCTCTCGATGGTCTaGATGTGCACGTTGCTGTGTGTCTGGGAAAGAACAGCTTCATGC | + |
|
Preference number: 5 (lower is better) Translates to: TDIKSSLSLVSLSMV*MCTLLCVWERTASC Trigger: GCATGAAGCTGTTCTTTCCCAGACACACAGCAACGTGCACATCCAGACCATCGAGAGGCTGACTAAAGAGAGAGATGACTTAATGTCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
||
| CDS-3UTR CAA 90 bp | AAATACTGTTCACTTTCAGTTTTGTCGTGCTGGGTCTCCATTTGCTGTATCTTCGAGACTCCGTTGGTATaGCCCCAGACTGTCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KYCSLSVLSCWVSICCIFETPLV*PQTVLQ Trigger: CTGGAGGACAGTCTGGGGCAATACCAACGGAGTCTC...GAAGATACAGCAAATGGAGACCCAGCACGACAAAACTGAAAGTGAACAGTATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| CDS-3UTR CAA 90 bp | TTGATGCTGAAGCAAGCACTCCCTGTCCATAGCACAGGGACAGACCATGGCATGCTCAAGTACAACTACTaGCACCCTATTTTTCATTCC | + |
|
Preference number: 5 (lower is better) Translates to: LMLKQALPVHSTGTDHGMLKYNY*HPIFHS Trigger: GGAATGAAAAATAGGGTGCAAGTAGTTGTACTTGAG...CATGCCATGGTCTGTCCCTGTGCTATGGACAGGGAGTGCTTGCTTCAGCATCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS GCA 90 bp | CCAGCTCCAGCTTCCATTTATTGGCATCACCAGTGGATGCAGTTTTaGCAGTTTCAGCATCACCATGAGAAAATGGTCTCTTTGCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PAPASIYWHHQWMQF*QFQHHHEKMVSLQL Trigger: AAGCTGCAAAGAGACCATTTTCTCATGGTGATGCTGAAACTGGCAAAACTGCATCCACTGGTGATGCCAATAAATGGAAGCTGGAGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
||
| CDS-3UTR CAA 90 bp | CACTTTCAGTTTTGTCGTGCTGGGTCTCCATTTGCTGTATCTTCTGTGTCAGCTTCCAGCTTCCATTTATaGGCATCACCAGTGGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: HFQFCRAGSPFAVSSVSASSFHL*ASPVDA Trigger: TGCATCCACTGGTGATGCCAATAAATGGAAGCTGGA...AGCTGACACAGAAGATACAGCAAATGGAGACCCAGCACGACAAAACTGAAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| CDS TCA 90 bp | TCATCCTTGCAGAACTTGACTTCTGCTTCTAAGTGGTGGATATATTaGGACTGGTCGTTAATGATAGGAACGAGGTTGTGCATGGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSLQNLTSASKWWIY*DWSLMIGTRLCMVG Trigger: GCCCACCATGCACAACCTCGTTCCTATCATTAACGACCAGTCTCAATATATCCACCACTTAGAAGCAGAAGTCAAGTTCTGCAAGGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS TCA 90 bp | GATGCATCCAGGAATGTTTGCTCCCTCAATGTCTCCTCCGGTCTTTaGGATTTCAGTTCTTGCTGGAGCCTTTCATTCTCAAGTACAACT | + |
|
Preference number: 5 (lower is better) Translates to: DASRNVCSLNVSSGL*DFSSCWSLSFSSTT Trigger: AGTTGTACTTGAGAATGAAAGGCTCCAGCAAGAACTGAAATCTCAAAGACCGGAGGAGACATTGAGGGAGCAAACATTCCTGGATGCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
||
| CDS TCA 90 bp | TTGGCATCACCAGTGGATGCAGTTTTGCCAGTTTCAGCATCACCATaGGAAAATGGTCTCTTTGCAGCTTCATCCACCCTAGAATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LASPVDAVLPVSASP*ENGLFAASSTLESS Trigger: AGAAGATTCTAGGGTGGATGAAGCTGCAAAGAGACCATTTTCTCATGGTGATGCTGAAACTGGCAAAACTGCATCCACTGGTGATGCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
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| CDS GCA 90 bp | AGAATCTTCTCGTGTCATAATCCAAGAATTCTGCATGTTTCCAGATaGATCCAGGAATGTTTGCTCCCTCAATGTCTCCTCCGGTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RIFSCHNPRILHVSR*IQECLLPQCLLRSL Trigger: CAAAGACCGGAGGAGACATTGAGGGAGCAAACATTCCTGGATGCATCTGGAAACATGCAGAATTCTTGGATTATGACACGAGAAGATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
||
| CDS CCA 90 bp | CATTCCAGACAATTCATCCGAAGGGGACAACTTTCGTCTTCGCGGTaGAGATGTCTCATTTTCCTTATTTGTTTGTTGACGCAACAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: HSRQFIRRGQLSSSR*RCLIFLICLLTQQS Trigger: GCTTTGTTGCGTCAACAAACAAATAAGGAAAATGAGACATCTCCACCGCGAAGACGAAAGTTGTCCCCTTCGGATGAATTGTCTGGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
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| CDS GCA 90 bp | GATTTCAGTTCTTGCTGGAGCCTTTCATTCTCAAGTACAACTACTTaGACCCTATTTTTCATTCCAGACAATTCATCCGAAGGGGACAAC | + |
|
Preference number: 5 (lower is better) Translates to: DFSSCWSLSFSSTTT*TLFFIPDNSSEGDN Trigger: GTTGTCCCCTTCGGATGAATTGTCTGGAATGAAAAATAGGGTGCAAGTAGTTGTACTTGAGAATGAAAGGCTCCAGCAAGAACTGAAATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS-3UTR CAA 90 bp | TTAGTGAGACCTTTTCCAGTTTCTTGGCTAACAAGCAGCATTCTTCTTTTAATTATGATAGGAACGAGGTaGTGCATGGTGGGCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LVRPFPVSWLTSSILLLIMIGTR*CMVGML Trigger: CAGCATGCCCACCATGCACAACCTCGTTCCTATCAT...AATTAAAAGAAGAATGCTGCTTGTTAGCCAAGAAACTGGAAAAGGTCTCACTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| CDS-3UTR CAA 90 bp | TTTAAAAATTCTTCTCTCCCGGGACTCCGCAGAAAGTTGTCTGCACAGACAAGACTCAAGTACAACTACTaGCACCCTATTTTTCATTCC | + |
|
Preference number: 5 (lower is better) Translates to: FKNSSLPGLRRKLSAQTRLKYNY*HPIFHS Trigger: GGAATGAAAAATAGGGTGCAAGTAGTTGTACTTGAG...TCTTGTCTGTGCAGACAACTTTCTGCGGAGTCCCGGGAGAGAAGAATTTTTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS GCA 90 bp | GATTTCAGTTCTTGCTGGAGCCTTTCATTCTCAAGTACAACTACTTaGACCCTATTTTTCATTCCAGACAATTCATCCTTGCAGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: DFSSCWSLSFSSTTT*TLFFIPDNSSLQNL Trigger: CAAGTTCTGCAAGGATGAATTGTCTGGAATGAAAAATAGGGTGCAAGTAGTTGTACTTGAGAATGAAAGGCTCCAGCAAGAACTGAAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
||
| CDS-3UTR CAA 90 bp | TTAGTGAGACCTTTTCCAGTTTCTTGGCTAACAAGCAGCATTCTTCTTTTAATTCTCAAGTACAACTACTaGCACCCTATTTTTCATTCC | + |
|
Preference number: 5 (lower is better) Translates to: LVRPFPVSWLTSSILLLILKYNY*HPIFHS Trigger: GGAATGAAAAATAGGGTGCAAGTAGTTGTACTTGAG...AATTAAAAGAAGAATGCTGCTTGTTAGCCAAGAAACTGGAAAAGGTCTCACTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| CDS CAA 72 bp | GCGAGAGGACAGGGGCCCTCCTGGCCCTGGAGGTTTTaGCCTCAGGATCTGCGGAAGCGATCTTGGTTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: ARGQGPSWPWRF*PQDLRKRSWFR Trigger: CCGGAACCAAGATCGCTTCCGCAGATCCTGAGGCAAAAACCTCCAGGGCCAGGAGGGCCCCTGTCCTCTCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
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| CDS GCA 72 bp | CGAGAGGACAGGGGCCCTCCTGGCCCTGGAGGTTTTTaGCTCAGGATCTGCGGAAGCGATCTTGGTTCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: REDRGPPGPGGF*LRICGSDLGSG Trigger: TCCGGAACCAAGATCGCTTCCGCAGATCCTGAGGCAAAAACCTCCAGGGCCAGGAGGGCCCCTGTCCTCTCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
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| CDS CCA 72 bp | ACCTTCCAGGCGAGAGGACAGGGGCCCTCCTGGCCCTaGAGGTTTTTGCCTCAGGATCTGCGGAAGCGATCT | + |
|
Preference number: 6 (lower is better) Translates to: TFQARGQGPSWP*RFLPQDLRKRS Trigger: AGATCGCTTCCGCAGATCCTGAGGCAAAAACCTCCAGGGCCAGGAGGGCCCCTGTCCTCTCGCCTGGAAGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
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| CDS CAA 90 bp | ACCTTCCAGGCGAGAGGACAGGGGCCCTCCTGGCCCTGGAGGTTTTaGCCTCAGGATCTGCGGAAGCGATCTTGGTTCCGGAACTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: TFQARGQGPSWPWRF*PQDLRKRSWFRNST Trigger: TGTGGAGTTCCGGAACCAAGATCGCTTCCGCAGATCCTGAGGCAAAAACCTCCAGGGCCAGGAGGGCCCCTGTCCTCTCGCCTGGAAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
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| CDS TCA 72 bp | GTTGTGCATGGTGGGCATGCTGCCATCGTCACATTCTaGCGGCCGCGAAGGGGACAACTTTCGTCTTCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: VVHGGHAAIVTF*RPRRGQLSSSR Trigger: CCGCGAAGACGAAAGTTGTCCCCTTCGCGGCCGTCAGAATGTGACGATGGCAGCATGCCCACCATGCACAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
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| CDS GCA 72 bp | GGCCCTCCTGGCCCTGGAGGTTTTTGCCTCAGGATCTaGGGAAGCGATCTTGGTTCCGGAACTCCACAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: GPPGPGGFCLRI*GSDLGSGTPQK Trigger: TTTCTGTGGAGTTCCGGAACCAAGATCGCTTCCGCAGATCCTGAGGCAAAAACCTCCAGGGCCAGGAGGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
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| CDS CAA 72 bp | GCTTCTATTGGCACGTTCCCGGAGACTCCGTTGGTATaGCCCCAGACTGTCCTCCAGGGTAGAGTTCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: ASIGTFPETPLV*PQTVLQGRVPW Trigger: CCAGGGAACTCTACCCTGGAGGACAGTCTGGGGCAATACCAACGGAGTCTCCGGGAACGTGCCAATAGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
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| CDS CAA 90 bp | CTTCCTCTGTCATCTGCACAGCATGCTTCACCTGCTCATAGGCACTaGTCTCTCTCTTCTGCGCTTCTGCCAAGCTGCTCCGCACAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LPLSSAQHASPAHRH*SLSSALLPSCSAQR Trigger: TCTCTGTGCGGAGCAGCTTGGCAGAAGCGCAGAAGAGAGAGACAAGTGCCTATGAGCAGGTGAAGCATGCTGTGCAGATGACAGAGGAAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
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| CDS CCA 72 bp | GCTGAGCACATTTCAAACAGAGGCCACCCACACGGCTaGATGCACTCGCAGCCAGAAGAGACTCTTTATGCT | + |
|
Preference number: 6 (lower is better) Translates to: AEHISNRGHPHG*MHSQPEETLYA Trigger: AGCATAAAGAGTCTCTTCTGGCTGCGAGTGCATCCAGCCGTGTGGGTGGCCTCTGTTTGAAATGTGCTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
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| CDS CAA 72 bp | GTGAATGCTTCTATTGGCACGTTCCCGGAGACTCCGTaGGTATTGCCCCAGACTGTCCTCCAGGGTAGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: VNASIGTFPETP*VLPQTVLQGRV Trigger: AACTCTACCCTGGAGGACAGTCTGGGGCAATACCAACGGAGTCTCCGGGAACGTGCCAATAGAAGCATTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
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| CDS TCA 72 bp | ACGTTGCTGTGTGTCTGGGAAAGAACAGCTTCATGCTaGGCACATTTCAAACAGAGGCCACCCACACGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TLLCVWERTASC*AHFKQRPPTRL Trigger: CAGCCGTGTGGGTGGCCTCTGTTTGAAATGTGCTCAGCATGAAGCTGTTCTTTCCCAGACACACAGCAACGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
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| CDS CAA 90 bp | TGCTGCAGCTCATGCCAGGCCACCCCTGTGTCCTCATTTTCTACGTaGATGCTGGTGGAAGGATCCAGTGCATCTTCTTCTACAGTGACA | + |
|
Preference number: 6 (lower is better) Translates to: CCSSCQATPVSSFST*MLVEGSSASSSTVT Trigger: TGTCACTGTAGAAGAAGATGCACTGGATCCTTCCACCAGCATCAACGTAGAAAATGAGGACACAGGGGTGGCCTGGCATGAGCTGCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
||
| CDS TCA 72 bp | GTGACATCCACTTCTCTCAGGGCACATTTCAACTGGTaGATGCTTCTATTGGCACGTTCCCGGAGACTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: VTSTSLRAHFNW*MLLLARSRRLR Trigger: ACGGAGTCTCCGGGAACGTGCCAATAGAAGCATTCACCAGTTGAAATGTGCCCTGAGAGAAGTGGATGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
||
| CDS TCA 72 bp | CATGCCAGGCCACCCCTGTGTCCTCATTTTCTACGTTaGTGCTGGTGGAAGGATCCAGTGCATCTTCTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: HARPPLCPHFLR*CWWKDPVHLLL Trigger: TAGAAGAAGATGCACTGGATCCTTCCACCAGCATCAACGTAGAAAATGAGGACACAGGGGTGGCCTGGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
||
| CDS GCA 72 bp | CATCCACTTCTCTCAGGGCACATTTCAACTGGTGAATaGTTCTATTGGCACGTTCCCGGAGACTCCGTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: HPLLSGHISTGE*FYWHVPGDSVG Trigger: ACCAACGGAGTCTCCGGGAACGTGCCAATAGAAGCATTCACCAGTTGAAATGTGCCCTGAGAGAAGTGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
||
| CDS GCA 72 bp | AGCACATTTCAAACAGAGGCCACCCACACGGCTGGATaGACTCGCAGCCAGAAGAGACTCTTTATGCTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: STFQTEATHTAG*TRSQKRLFMLQ Trigger: TTGAAGCATAAAGAGTCTCTTCTGGCTGCGAGTGCATCCAGCCGTGTGGGTGGCCTCTGTTTGAAATGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
||
| CDS GCA 72 bp | AGGCACTTGTCTCTCTCTTCTGCGCTTCTGCCAAGCTaGTCCGCACAGAGACTAGCACAGACATTAAGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: RHLSLSSALLPS*SAQRLAQTLSH Trigger: ATGACTTAATGTCTGTGCTAGTCTCTGTGCGGAGCAGCTTGGCAGAAGCGCAGAAGAGAGAGACAAGTGCCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
||
| CDS CAA 72 bp | TGCTCACACTGGATCAAAGCCTTGGTCTTCTCAAAGTaGGCTTCCTCTGTCATCTGCACAGCATGCTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: CSHWIKALVFSK*ASSVICTACFT Trigger: GGTGAAGCATGCTGTGCAGATGACAGAGGAAGCCAACTTTGAGAAGACCAAGGCTTTGATCCAGTGTGAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027785.15 |
||
| CDS CAA 72 bp | ACACACGCAAGGGATACAGTCTTGGTCTTCTCAAAGTaGGCTTCCTCTGTCATCTGCACAGCATGCTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: THARDTVLVFSK*ASSVICTACFT Trigger: GGTGAAGCATGCTGTGCAGATGACAGAGGAAGCCAACTTTGAGAAGACCAAGACTGTATCCCTTGCGTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123409.8 |
||
| CDS TCA 72 bp | TGCTGGTGGAAGGATCCAGTGCATCTTCTTCTACAGTaGCATCCACTTCTCTCAGGGCACATTTCAACTGGT | + |
|
Preference number: 6 (lower is better) Translates to: CWWKDPVHLLLQ*HPLLSGHISTG Trigger: ACCAGTTGAAATGTGCCCTGAGAGAAGTGGATGTCACTGTAGAAGAAGATGCACTGGATCCTTCCACCAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
||
| CDS CCA 72 bp | AAGTCATCTCTCTCTTTAGTCAGCCTCTCGATGGTCTaGATGTGCACGTTGCTGTGTGTCTGGGAAAGAACA | + |
|
Preference number: 6 (lower is better) Translates to: KSSLSLVSLSMV*MCTLLCVWERT Trigger: TGTTCTTTCCCAGACACACAGCAACGTGCACATCCAGACCATCGAGAGGCTGACTAAAGAGAGAGATGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
||
| CDS CAA 72 bp | GTGAGTTTCAGCCTCTCCAGCTCCAGCTTCCATTTATaGGCATCACCAGTGGATGCAGTTTTGCCAGTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: VSFSLSSSSFHL*ASPVDAVLPVS Trigger: TGAAACTGGCAAAACTGCATCCACTGGTGATGCCAATAAATGGAAGCTGGAGCTGGAGAGGCTGAAACTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
||
| CDS CAA 72 bp | GGAACTCCACAGAAAGTAGTCTTGGTCTTCTCAAAGTaGGCTTCCTCTGTCATCTGCACAGCATGCTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: GTPQKVVLVFSK*ASSVICTACFT Trigger: GGTGAAGCATGCTGTGCAGATGACAGAGGAAGCCAACTTTGAGAAGACCAAGACTACTTTCTGTGGAGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
||
| CDS CAA 90 bp | TGTCTCATTTTCCTTATTTGTTTGTTGACGCAACAAAGCTTTCAGTaGATTGACAGCATGGCTGTGCTGCAGCTCATGCCAGGCCACCCC | + |
|
Preference number: 6 (lower is better) Translates to: CLIFLICLLTQQSFQ*IDSMAVLQLMPGHP Trigger: GGGGTGGCCTGGCATGAGCTGCAGCACAGCCATGCTGTCAATCAACTGAAAGCTTTGTTGCGTCAACAAACAAATAAGGAAAATGAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
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| CDS TCA 72 bp | CCAGTGGATGCAGTTTTGCCAGTTTCAGCATCACCATaGGAAAATGGTCTCTTTGCAGCTTCATCCACCCTA | + |
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Preference number: 6 (lower is better) Translates to: PVDAVLPVSASP*ENGLFAASSTL Trigger: TAGGGTGGATGAAGCTGCAAAGAGACCATTTTCTCATGGTGATGCTGAAACTGGCAAAACTGCATCCACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
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| CDS CAA 90 bp | CTTTCGTCTTCGCGGTGGAGATGTCTCATTTTCCTTATTTGTTTGTaGACGCAACAAAGCTTTCAGTTGATTGACAGCATGGCTGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: LSSSRWRCLIFLICL*TQQSFQLIDSMAVL Trigger: CAGCACAGCCATGCTGTCAATCAACTGAAAGCTTTGTTGCGTCAACAAACAAATAAGGAAAATGAGACATCTCCACCGCGAAGACGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
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| CDS CAA 90 bp | TGTTTGCTCCCTCAATGTCTCCTCCGGTCTTTGAGATTTCAGTTCTaGCTGGAGCCTTTCATTCTCAAGTACAACTACTTGCACCCTATT | + |
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Preference number: 6 (lower is better) Translates to: CLLPQCLLRSLRFQF*LEPFILKYNYLHPI Trigger: AATAGGGTGCAAGTAGTTGTACTTGAGAATGAAAGGCTCCAGCAAGAACTGAAATCTCAAAGACCGGAGGAGACATTGAGGGAGCAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
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| CDS GCA 72 bp | TCGTGTCATAATCCAAGAATTCTGCATGTTTCCAGATaGATCCAGGAATGTTTGCTCCCTCAATGTCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: SCHNPRILHVSR*IQECLLPQCLL Trigger: GAGGAGACATTGAGGGAGCAAACATTCCTGGATGCATCTGGAAACATGCAGAATTCTTGGATTATGACACGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
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| CDS GCA 72 bp | GCTTCCATTTATTGGCATCACCAGTGGATGCAGTTTTaGCAGTTTCAGCATCACCATGAGAAAATGGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: ASIYWHHQWMQF*QFQHHHEKMVS Trigger: AGAGACCATTTTCTCATGGTGATGCTGAAACTGGCAAAACTGCATCCACTGGTGATGCCAATAAATGGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
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| CDS CCA 72 bp | CAATTCATCCGAAGGGGACAACTTTCGTCTTCGCGGTaGAGATGTCTCATTTTCCTTATTTGTTTGTTGACG | + |
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Preference number: 6 (lower is better) Translates to: QFIRRGQLSSSR*RCLIFLICLLT Trigger: CGTCAACAAACAAATAAGGAAAATGAGACATCTCCACCGCGAAGACGAAAGTTGTCCCCTTCGGATGAATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
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| CDS CAA 72 bp | TTCCTTATTTGTTTGTTGACGCAACAAAGCTTTCAGTaGATTGACAGCATGGCTGTGCTGCAGCTCATGCCA | + |
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Preference number: 6 (lower is better) Translates to: FLICLLTQQSFQ*IDSMAVLQLMP Trigger: TGGCATGAGCTGCAGCACAGCCATGCTGTCAATCAACTGAAAGCTTTGTTGCGTCAACAAACAAATAAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
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| CDS CAA 72 bp | CCTCAATGTCTCCTCCGGTCTTTGAGATTTCAGTTCTaGCTGGAGCCTTTCATTCTCAAGTACAACTACTTG | + |
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Preference number: 6 (lower is better) Translates to: PQCLLRSLRFQF*LEPFILKYNYL Trigger: CAAGTAGTTGTACTTGAGAATGAAAGGCTCCAGCAAGAACTGAAATCTCAAAGACCGGAGGAGACATTGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
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| CDS CAA 72 bp | AGAATTCTGCATGTTTCCAGATGCATCCAGGAATGTTaGCTCCCTCAATGTCTCCTCCGGTCTTTGAGATTT | + |
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Preference number: 6 (lower is better) Translates to: RILHVSRCIQEC*LPQCLLRSLRF Trigger: AAATCTCAAAGACCGGAGGAGACATTGAGGGAGCAAACATTCCTGGATGCATCTGGAAACATGCAGAATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
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| CDS CAA 90 bp | CAACTTTCGTCTTCGCGGTGGAGATGTCTCATTTTCCTTATTTGTTaGTTGACGCAACAAAGCTTTCAGTTGATTGACAGCATGGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: QLSSSRWRCLIFLIC*LTQQSFQLIDSMAV Trigger: CACAGCCATGCTGTCAATCAACTGAAAGCTTTGTTGCGTCAACAAACAAATAAGGAAAATGAGACATCTCCACCGCGAAGACGAAAGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
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| CDS CAA 90 bp | CATAATCCAAGAATTCTGCATGTTTCCAGATGCATCCAGGAATGTTaGCTCCCTCAATGTCTCCTCCGGTCTTTGAGATTTCAGTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: HNPRILHVSRCIQEC*LPQCLLRSLRFQFL Trigger: CAAGAACTGAAATCTCAAAGACCGGAGGAGACATTGAGGGAGCAAACATTCCTGGATGCATCTGGAAACATGCAGAATTCTTGGATTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
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| CDS TCA 72 bp | CAGAACTTGACTTCTGCTTCTAAGTGGTGGATATATTaGGACTGGTCGTTAATGATAGGAACGAGGTTGTGC | + |
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Preference number: 6 (lower is better) Translates to: QNLTSASKWWIY*DWSLMIGTRLC Trigger: GCACAACCTCGTTCCTATCATTAACGACCAGTCTCAATATATCCACCACTTAGAAGCAGAAGTCAAGTTCTG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
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| CDS CCA 72 bp | TGCTTCAATCTTTCCTTAAGATCCTCACAGGTTTTCTaGTATTCAGCTAAGTCTTTCCTCAGAAGCATCAGC | + |
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Preference number: 6 (lower is better) Translates to: CFNLSLRSSQVF*YSAKSFLRSIS Trigger: GCTGATGCTTCTGAGGAAAGACTTAGCTGAATACCAGAAAACCTGTGAGGATCTTAAGGAAAGATTGAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
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| CDS CAA 72 bp | TCGCGGTGGAGATGTCTCATTTTCCTTATTTGTTTGTaGACGCAACAAAGCTTTCAGTTGATTGACAGCATG | + |
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Preference number: 6 (lower is better) Translates to: SRWRCLIFLICL*TQQSFQLIDSM Trigger: CATGCTGTCAATCAACTGAAAGCTTTGTTGCGTCAACAAACAAATAAGGAAAATGAGACATCTCCACCGCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
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| CDS CAA 72 bp | TCTTCGCGGTGGAGATGTCTCATTTTCCTTATTTGTTaGTTGACGCAACAAAGCTTTCAGTTGATTGACAGC | + |
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Preference number: 6 (lower is better) Translates to: SSRWRCLIFLIC*LTQQSFQLIDS Trigger: GCTGTCAATCAACTGAAAGCTTTGTTGCGTCAACAAACAAATAAGGAAAATGAGACATCTCCACCGCGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027785.15 ENSMUST00000056773.15 ENSMUST00000123409.8 |
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| CDS CAA 90 bp | AGATTTCAGTTCTTGCTGGAGCCTTTCATTCTCAAGTACAACTACTaGCACCCTATTTTTCATTCCAGACAATTCATCCGAAGGGGACAA | + |
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Preference number: 6 (lower is better) Translates to: RFQFLLEPFILKYNY*HPIFHSRQFIRRGQ Trigger: TTGTCCCCTTCGGATGAATTGTCTGGAATGAAAAATAGGGTGCAAGTAGTTGTACTTGAGAATGAAAGGCTCCAGCAAGAACTGAAATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
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| CDS CAA 72 bp | ACTTGCACCCTATTTTTCATTCCAGACAATTCATCCTaGCAGAACTTGACTTCTGCTTCTAAGTGGTGGATA | + |
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Preference number: 6 (lower is better) Translates to: TCTLFFIPDNSS*QNLTSASKWWI Trigger: TATCCACCACTTAGAAGCAGAAGTCAAGTTCTGCAAGGATGAATTGTCTGGAATGAAAAATAGGGTGCAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
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| CDS CAA 72 bp | TTCTTGCTGGAGCCTTTCATTCTCAAGTACAACTACTaGCACCCTATTTTTCATTCCAGACAATTCATCCGA | + |
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Preference number: 6 (lower is better) Translates to: FLLEPFILKYNY*HPIFHSRQFIR Trigger: TCGGATGAATTGTCTGGAATGAAAAATAGGGTGCAAGTAGTTGTACTTGAGAATGAAAGGCTCCAGCAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056773.15 |
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| CDS CAA 90 bp | AGATTTCAGTTCTTGCTGGAGCCTTTCATTCTCAAGTACAACTACTaGCACCCTATTTTTCATTCCAGACAATTCATCCTTGCAGAACTT | + |
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Preference number: 6 (lower is better) Translates to: RFQFLLEPFILKYNY*HPIFHSRQFILAEL Trigger: AAGTTCTGCAAGGATGAATTGTCTGGAATGAAAAATAGGGTGCAAGTAGTTGTACTTGAGAATGAAAGGCTCCAGCAAGAACTGAAATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
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| CDS CAA 72 bp | TTCTTGCTGGAGCCTTTCATTCTCAAGTACAACTACTaGCACCCTATTTTTCATTCCAGACAATTCATCCTT | + |
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Preference number: 6 (lower is better) Translates to: FLLEPFILKYNY*HPIFHSRQFIL Trigger: AAGGATGAATTGTCTGGAATGAAAAATAGGGTGCAAGTAGTTGTACTTGAGAATGAAAGGCTCCAGCAAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027785.15 ENSMUST00000123409.8 |
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