Pregenerated sensors for SDCBP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027456Ensembl transcript IDs: ENSMUST00000028950.9
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ATCGGCAATGACAGACTCAATATACATCACCTGGGACACATCCCTGCAATACCCGTCTTCCCTGCAGGATaGCGGGAAGCCTGCGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: IGNDRLNIHHLGHIPAIPVFPAG*REACAA Trigger: GGCAGCGCAGGCTTCCCGCCATCCTGCAGGGAAGAC...GGGTATTGCAGGGATGTGTCCCAGGTGATGTATATTGAGTCTGTCATTGCCGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| 3UTR-3UTR GCA 90 bp | GTCTGTGCCTCAGCACAGCTAGAAGTCAGGATCCAAGGAGGCCTAAAATCGGCAAGGCAGCAAGCCAGCTaGAACCTGTCATCTGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: VCASAQLEVRIQGGLKSARQQAS*NLSSED Trigger: GTCCTCAGATGACAGGTTGCAGCTGGCTTGCTGCCT...TGCCGATTTTAGGCCTCCTTGGATCCTGACTTCTAGCTGTGCTGAGGCACAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| 3UTR-3UTR GCA 90 bp | TCAATATACATCACCTGGGACACATCCCTGCAATACCCAGGCAGCAAGCCAGCTCTGTCATCTGAGGACTaGTGTCTTCCCTGCAGGATG | + |
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Preference number: 2 (lower is better) Translates to: SIYITWDTSLQYPGSKPALSSED*CLPCRM Trigger: CATCCTGCAGGGAAGACAGCAGTCCTCAGATGACAG...AGCTGGCTTGCTGCCTGGGTATTGCAGGGATGTGTCCCAGGTGATGTATATTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| 3UTR GCA 72 bp | GGACACATCCCTGCAATACCCAGGCAGCAAGCCAGCTaGAACCTGTCATCTGAGGACTGCTGTCTTCCCTGC | + |
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Preference number: 3 (lower is better) Translates to: GHIPAIPRQQAS*NLSSEDCCLPC Trigger: GCAGGGAAGACAGCAGTCCTCAGATGACAGGTTGCAGCTGGCTTGCTGCCTGGGTATTGCAGGGATGTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| 3UTR GCA 72 bp | AAGGATGCAGCAGCACTTAGTGACATTCTGCTGTTCTaGCTAAGTGCCCAGCATCTAGGGCACAGAGAACCA | + |
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Preference number: 3 (lower is better) Translates to: KDAAALSDILLF*LSAQHLGHREP Trigger: TGGTTCTCTGTGCCCTAGATGCTGGGCACTTAGGCAGAACAGCAGAATGTCACTAAGTGCTGCTGCATCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| 3UTR TCA 72 bp | GTTACCATTAGTCTGTACATAGCCTGTGACAAAGATTaGCGAAGACAACACACAAGGCATTCCTCTGTCCAA | + |
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Preference number: 3 (lower is better) Translates to: VTISLYIACDKD*RRQHTRHSSVQ Trigger: TTGGACAGAGGAATGCCTTGTGTGTTGTCTTCGTCAATCTTTGTCACAGGCTATGTACAGACTAATGGTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS-3UTR TCA 90 bp | CCTGGGACACATCCCTGCAATACCCAGGCAGCAAGCCAGCTGCAACCTGTCATCTGCCCTGGGCCTGGATaGCTTGGCCCACCTTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: PGTHPCNTQAASQLQPVICPGPG*LGPPSD Trigger: ATCTGAAGGTGGGCCAAGTCATCCAGGCCCAGGGCA...GATGACAGGTTGCAGCTGGCTTGCTGCCTGGGTATTGCAGGGATGTGTCCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS-3UTR TCA 90 bp | ACATCCCTGCAATACCCAGGCAGCAAGCCAGCTGCAACCTGTCATCTGAGGACTAGTTGGCATCGTGGGTaGGGCTCTGCCCTGGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: TSLQYPGSKPAATCHLRTSWHRG*GSALGL Trigger: CAGGCCCAGGGCAGAGCCTCACCCACGATGCCAACT...AGTCCTCAGATGACAGGTTGCAGCTGGCTTGCTGCCTGGGTATTGCAGGGATGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS-3UTR CCA 90 bp | CCTGGGACACATCCCTGCAATACCCAGGCAGCAAGCCAGCTGCAACCTGTCATCTGGGCCTGGATGACTTaGCCCACCTTCAGATCCTCC | + |
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Preference number: 4 (lower is better) Translates to: PGTHPCNTQAASQLQPVIWAWMT*PTFRSS Trigger: GGAGGATCTGAAGGTGGGCCAAGTCATCCAGGCCCA...GATGACAGGTTGCAGCTGGCTTGCTGCCTGGGTATTGCAGGGATGTGTCCCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS-3UTR CCA 90 bp | ACATCCCTGCAATACCCAGGCAGCAAGCCAGCTGCAACCTGTCATCTGAGGACTGCTCTGCCCTGGGCCTaGATGACTTGGCCCACCTTC | + |
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Preference number: 4 (lower is better) Translates to: TSLQYPGSKPAATCHLRTALPWA*MTWPTF Trigger: GAAGGTGGGCCAAGTCATCCAGGCCCAGGGCAGAGC...AGTCCTCAGATGACAGGTTGCAGCTGGCTTGCTGCCTGGGTATTGCAGGGATGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS-3UTR GCA 90 bp | GACACATCCCTGCAATACCCAGGCAGCAAGCCAGCTGCAACCTGTCATCTGAGGCAAACCCACAAGGGATaGAGGGGTGTTGGCCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: DTSLQYPGSKPAATCHLRQTHKG*RGVGLD Trigger: GTCCAGGCCAACACCCCTGCATCCCTTGTGGGTTTG...CCTCAGATGACAGGTTGCAGCTGGCTTGCTGCCTGGGTATTGCAGGGATGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS-3UTR CCA 90 bp | TCAATATACATCACCTGGGACACATCCCTGCAATACCCAGGCAGCAAGCCAGCTGGTGAGGCTCTGCCCTaGGCCTGGATGACTTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: SIYITWDTSLQYPGSKPAGEALP*AWMTWP Trigger: GGGCCAAGTCATCCAGGCCCAGGGCAGAGCCTCACC...AGCTGGCTTGCTGCCTGGGTATTGCAGGGATGTGTCCCAGGTGATGTATATTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS-3UTR TCA 90 bp | GCCCAGCATCTAGGGCACAGAGAACCAGGTCCCAAGTCTGTGCCTCAGCACAGCAAAGCCAACTTGCCCTaGGCTGTCTTTGTGCATGGT | + |
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Preference number: 4 (lower is better) Translates to: AQHLGHREPGPKSVPQHSKANLP*AVFVHG Trigger: ACCATGCACAAAGACAGCTCAGGGCAAGTTGGCTTT...GCTGTGCTGAGGCACAGACTTGGGACCTGGTTCTCTGTGCCCTAGATGCTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS-3UTR TCA 90 bp | GCCCAGCATCTAGGGCACAGAGAACCAGGTCCCAAGTCTGTGCCTCAGCACAGCTGTCCTTTAGCCCAATaGCGTTCTGTCCGTTCACCT | + |
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Preference number: 4 (lower is better) Translates to: AQHLGHREPGPKSVPQHSCPLAQ*RSVRSP Trigger: AGGTGAACGGACAGAACGTCATTGGGCTAAAGGACA...GCTGTGCTGAGGCACAGACTTGGGACCTGGTTCTCTGTGCCCTAGATGCTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS-3UTR CCA 90 bp | GTCTGTGCCTCAGCACAGCTAGAAGTCAGGATCCAAGGAGGCCTAAAATCGGCAGGGATGCAGGGGTGTTaGCCTGGACCAGCTGCACAA | + |
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Preference number: 4 (lower is better) Translates to: VCASAQLEVRIQGGLKSAGMQGC*PGPAAQ Trigger: TTGTGCAGCTGGTCCAGGCCAACACCCCTGCATCCC...TGCCGATTTTAGGCCTCCTTGGATCCTGACTTCTAGCTGTGCTGAGGCACAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS-3UTR GCA 90 bp | GCCCAGCATCTAGGGCACAGAGAACCAGGTCCCAAGTCTGTGCCTCAGCACAGCTCACAGCCATCAATTTaGAGGATCTGGTCCCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: AQHLGHREPGPKSVPQHSSQPSI*RIWSPK Trigger: CTTTGGGGACCAGATCCTGCAAATTGATGGCTGTGA...GCTGTGCTGAGGCACAGACTTGGGACCTGGTTCTCTGTGCCCTAGATGCTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS-3UTR TCA 90 bp | CCTGGGACACATCCCTGCAATACCCAGGCAGCAAGCCAGCTGCAACCTGTCATCGACAATCTTCTCCGCTaGTGCCTTCTTCAACACCTT | + |
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Preference number: 4 (lower is better) Translates to: PGTHPCNTQAASQLQPVIDNLLR*CLLQHL Trigger: AAGGTGTTGAAGAAGGCATCAGCGGAGAAGATTGTC...GATGACAGGTTGCAGCTGGCTTGCTGCCTGGGTATTGCAGGGATGTGTCCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS-3UTR TCA 90 bp | TCTAGGGCACAGAGAACCAGGTCCCAAGTCTGTGCCTCAGCACAGCTAGAAGTCTGTCTTTGTGCATGGTaGCAGTCCTCTGGAATGGCC | + |
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Preference number: 4 (lower is better) Translates to: SRAQRTRSQVCASAQLEVCLCAW*QSSGMA Trigger: GGCCATTCCAGAGGACTGTCACCATGCACAAAGACA...GACTTCTAGCTGTGCTGAGGCACAGACTTGGGACCTGGTTCTCTGTGCCCTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS-3UTR CCA 90 bp | GTCTGTGCCTCAGCACAGCTAGAAGTCAGGATCCAAGGAGGCCTAAAATCGGCAGAATGGAGTGGTCCATaGTGTGGTGAAGCAGCAACG | + |
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Preference number: 4 (lower is better) Translates to: VCASAQLEVRIQGGLKSAEWSGP*CGEAAT Trigger: CGTTGCTGCTTCACCACACCATGGACCACTCCATTC...TGCCGATTTTAGGCCTCCTTGGATCCTGACTTCTAGCTGTGCTGAGGCACAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS-3UTR GCA 90 bp | TCAATATACATCACCTGGGACACATCCCTGCAATACCCAGGCAGCAAGCCAGCTTGCCACGTTCATCCTTaGACAGGTGGATCTCTCGCA | + |
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Preference number: 4 (lower is better) Translates to: SIYITWDTSLQYPGSKPACHVHP*TGGSLA Trigger: TGCGAGAGATCCACCTGTGCAAGGATGAACGTGGCA...AGCTGGCTTGCTGCCTGGGTATTGCAGGGATGTGTCCCAGGTGATGTATATTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS-3UTR CCA 90 bp | CAAAAGGATGCAGCAGCACTTAGTGACATTCTGCTGTTCTGCCTAAGTGCCCAGTCAATTTGCAGGATCTaGTCCCCAAAGCGCAAACCC | + |
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Preference number: 4 (lower is better) Translates to: QKDAAALSDILLFCLSAQSICRI*SPKRKP Trigger: GGGTTTGCGCTTTGGGGACCAGATCCTGCAAATTGA...CTGGGCACTTAGGCAGAACAGCAGAATGTCACTAAGTGCTGCTGCATCCTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS-3UTR CCA 90 bp | ATGACAGACTCAATATACATCACCTGGGACACATCCCTGCAATACCCAGGCAGCGACAGTCCTCTGGAATaGCCTGTCCCGAATAACCAT | + |
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Preference number: 4 (lower is better) Translates to: MTDSIYITWDTSLQYPGSDSPLE*PVPNNH Trigger: ATGGTTATTCGGGACAGGCCATTCCAGAGGACTGTC...GCTGCCTGGGTATTGCAGGGATGTGTCCCAGGTGATGTATATTGAGTCTGTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS-3UTR CCA 90 bp | AAGGATGCAGCAGCACTTAGTGACATTCTGCTGTTCTGCCTAAGTGCCCAGCATATGGTGACAGTCCTCTaGAATGGCCTGTCCCGAATA | + |
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Preference number: 4 (lower is better) Translates to: KDAAALSDILLFCLSAQHMVTVL*NGLSRI Trigger: TATTCGGGACAGGCCATTCCAGAGGACTGTCACCAT...ATGCTGGGCACTTAGGCAGAACAGCAGAATGTCACTAAGTGCTGCTGCATCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS-3UTR CCA 90 bp | CAAAAGGATGCAGCAGCACTTAGTGACATTCTGCTGTTCTGCCTAAGTGCCCAGCACACACATAGTGGTTaGTTAGAAGTCCATTGCGGG | + |
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Preference number: 4 (lower is better) Translates to: QKDAAALSDILLFCLSAQHTHSG*LEVHCG Trigger: CCCGCAATGGACTTCTAACCAACCACTATGTGTGTG...CTGGGCACTTAGGCAGAACAGCAGAATGTCACTAAGTGCTGCTGCATCCTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS-3UTR TCA 90 bp | ATCGGCAATGACAGACTCAATATACATCACCTGGGACACATCCCTGCAATACCCTTCTTCAACACCTTGTaGGCTTTGTGTGTGTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: IGNDRLNIHHLGHIPAIPFFNTL*ALCVFH Trigger: GTGGAACACACACAAAGCTCACAAGGTGTTGAAGAA...GGGTATTGCAGGGATGTGTCCCAGGTGATGTATATTGAGTCTGTCATTGCCGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS-3UTR GCA 90 bp | ATCGGCAATGACAGACTCAATATACATCACCTGGGACACATCCCTGCAATACCCATAACTTTCCAGTTCTaGCAGGTTTGGATACAACTC | + |
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Preference number: 4 (lower is better) Translates to: IGNDRLNIHHLGHIPAIPITFQF*QVWIQL Trigger: GAGTTGTATCCAAACCTGGCAGAACTGGAAAGTTAT...GGGTATTGCAGGGATGTGTCCCAGGTGATGTATATTGAGTCTGTCATTGCCGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS CCA 90 bp | GCCATCGGGGCTGGCAGAGTTGGCATCGTGGGTGAGGCTCTGCCCTaGGCCTGGATGACTTGGCCCACCTTCAGATCCTCCAGAGACGGA | + |
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Preference number: 5 (lower is better) Translates to: AIGAGRVGIVGEALP*AWMTWPTFRSSRDG Trigger: TCCGTCTCTGGAGGATCTGAAGGTGGGCCAAGTCATCCAGGCCCAGGGCAGAGCCTCACCCACGATGCCAACTCTGCCAGCCCCGATGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS CCA 90 bp | GGGGCTGGCAGAGTTGGCATCGTGGGTGAGGCTCTGCCCTGGGCCTaGATGACTTGGCCCACCTTCAGATCCTCCAGAGACGGATACAGG | + |
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Preference number: 5 (lower is better) Translates to: GAGRVGIVGEALPWA*MTWPTFRSSRDGYR Trigger: CCTGTATCCGTCTCTGGAGGATCTGAAGGTGGGCCAAGTCATCCAGGCCCAGGGCAGAGCCTCACCCACGATGCCAACTCTGCCAGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS-3UTR CAA 90 bp | ACATCCCTGCAATACCCAGGCAGCAAGCCAGCTGCAACCTGTCATCTGAGGACTTCGGGGCTGGCAGAGTaGGCATCGTGGGTGAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: TSLQYPGSKPAATCHLRTSGLAE*ASWVRL Trigger: GAGCCTCACCCACGATGCCAACTCTGCCAGCCCCGA...AGTCCTCAGATGACAGGTTGCAGCTGGCTTGCTGCCTGGGTATTGCAGGGATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS-3UTR CAA 90 bp | ATCCCTGCAATACCCAGGCAGCAAGCCAGCTGCAACCTGTCATCTGAGGACTGCTGCCCTGAGCTGTCTTaGTGCATGGTGACAGTCCTC | + |
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Preference number: 5 (lower is better) Translates to: IPAIPRQQASCNLSSEDCCPELS*CMVTVL Trigger: GAGGACTGTCACCATGCACAAAGACAGCTCAGGGCA...GCAGTCCTCAGATGACAGGTTGCAGCTGGCTTGCTGCCTGGGTATTGCAGGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS TCA 90 bp | TGCCACGTTCATCCTTGCACAGGTGGATCTCTCGCACGCCAGGCTTaGTCTCTGCACGCAGTATACCCAGGTTGTTCCCAGATACTGGAG | + |
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Preference number: 5 (lower is better) Translates to: CHVHPCTGGSLARQA*SLHAVYPGCSQILE Trigger: CTCCAGTATCTGGGAACAACCTGGGTATACTGCGTGCAGAGATCAAGCCTGGCGTGCGAGAGATCCACCTGTGCAAGGATGAACGTGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS-3UTR CAA 90 bp | GGACACATCCCTGCAATACCCAGGCAGCAAGCCAGCTGCAACCTGTCATCTGAGCGCAGTATACCCAGGTaGTTCCCAGATACTGGAGCT | + |
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Preference number: 5 (lower is better) Translates to: GHIPAIPRQQASCNLSSERSIPR*FPDTGA Trigger: AGCTCCAGTATCTGGGAACAACCTGGGTATACTGCG...CTCAGATGACAGGTTGCAGCTGGCTTGCTGCCTGGGTATTGCAGGGATGTGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS GCA 90 bp | TCTGTCCGTTCACCTCACACACATAGTGGTTGGTTAGAAGTCCATTaGGGGCGGCGGAGCTTCCCTTTACCACAGACACGATCTTCCCCT | + |
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Preference number: 5 (lower is better) Translates to: SVRSPHTHSGWLEVH*GRRSFPLPQTRSSP Trigger: AGGGGAAGATCGTGTCTGTGGTAAAGGGAAGCTCCGCCGCCCGCAATGGACTTCTAACCAACCACTATGTGTGTGAGGTGAACGGACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS CCA 90 bp | AGGCTTGATCTCTGCACGCAGTATACCCAGGTTGTTCCCAGATACTaGAGCTACCACCTGGCCAGGTCCAGGGCTAGTGACCACCATATT | + |
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Preference number: 5 (lower is better) Translates to: RLDLCTQYTQVVPRY*SYHLARSRASDHHI Trigger: AATATGGTGGTCACTAGCCCTGGACCTGGCCAGGTGGTAGCTCCAGTATCTGGGAACAACCTGGGTATACTGCGTGCAGAGATCAAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS-3UTR CAA 90 bp | CAAAAGGATGCAGCAGCACTTAGTGACATTCTGCTGTTCTGCCTAAGTGCCCAGTGCACAAAGAGCCCCTaGTCAACAGCCTGCAGGCGA | + |
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Preference number: 5 (lower is better) Translates to: QKDAAALSDILLFCLSAQCTKSP*STACRR Trigger: TCGCCTGCAGGCTGTTGACAAGGGGCTCTTTGTGCA...CTGGGCACTTAGGCAGAACAGCAGAATGTCACTAAGTGCTGCTGCATCCTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS-3UTR CAA 90 bp | ATGACAGACTCAATATACATCACCTGGGACACATCCCTGCAATACCCAGGCAGCTTGCCACGTTCATCCTaGCACAGGTGGATCTCTCGC | + |
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Preference number: 5 (lower is better) Translates to: MTDSIYITWDTSLQYPGSLPRSS*HRWISR Trigger: GCGAGAGATCCACCTGTGCAAGGATGAACGTGGCAA...GCTGCCTGGGTATTGCAGGGATGTGTCCCAGGTGATGTATATTGAGTCTGTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS CCA 90 bp | CACCTGGCCAGGTCCAGGGCTAGTGACCACCATATTGTCACTATCTaGAATCTGAGTCAGGTTCTTCTGAACTTCTTGGCTAGAGAGGGA | + |
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Preference number: 5 (lower is better) Translates to: HLARSRASDHHIVTI*NLSQVLLNFLAREG Trigger: TCCCTCTCTAGCCAAGAAGTTCAGAAGAACCTGACTCAGATTCCAGATAGTGACAATATGGTGGTCACTAGCCCTGGACCTGGCCAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS-3UTR CAA 90 bp | GCAGCACTTAGTGACATTCTGCTGTTCTGCCTAAGTGCCCAGCATCTAGGGCACCCAGTTCTGCCAGGTTaGGATACAACTCTGAAAGTG | + |
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Preference number: 5 (lower is better) Translates to: AALSDILLFCLSAQHLGHPVLPG*DTTLKV Trigger: CACTTTCAGAGTTGTATCCAAACCTGGCAGAACTGG...GTGCCCTAGATGCTGGGCACTTAGGCAGAACAGCAGAATGTCACTAAGTGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS-3UTR CAA 90 bp | ATCGGCAATGACAGACTCAATATACATCACCTGGGACACATCCCTGCAATACCCATCTCAGTAACCTTTTaGTCCTTTAGCCCAATGACG | + |
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Preference number: 5 (lower is better) Translates to: IGNDRLNIHHLGHIPAIPISVTF*SFSPMT Trigger: CGTCATTGGGCTAAAGGACAAAAAGGTTACTGAGAT...GGGTATTGCAGGGATGTGTCCCAGGTGATGTATATTGAGTCTGTCATTGCCGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS CAA 90 bp | ATCTCTCGCACGCCAGGCTTGATCTCTGCACGCAGTATACCCAGGTaGTTCCCAGATACTGGAGCTACCACCTGGCCAGGTCCAGGGCTA | + |
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Preference number: 6 (lower is better) Translates to: ISRTPGLISARSIPR*FPDTGATTWPGPGL Trigger: TAGCCCTGGACCTGGCCAGGTGGTAGCTCCAGTATCTGGGAACAACCTGGGTATACTGCGTGCAGAGATCAAGCCTGGCGTGCGAGAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS CCA 72 bp | CTCTGCACGCAGTATACCCAGGTTGTTCCCAGATACTaGAGCTACCACCTGGCCAGGTCCAGGGCTAGTGAC | + |
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Preference number: 6 (lower is better) Translates to: LCTQYTQVVPRY*SYHLARSRASD Trigger: GTCACTAGCCCTGGACCTGGCCAGGTGGTAGCTCCAGTATCTGGGAACAACCTGGGTATACTGCGTGCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS TCA 72 bp | CATCCTTGCACAGGTGGATCTCTCGCACGCCAGGCTTaGTCTCTGCACGCAGTATACCCAGGTTGTTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: HPCTGGSLARQA*SLHAVYPGCSQ Trigger: CTGGGAACAACCTGGGTATACTGCGTGCAGAGATCAAGCCTGGCGTGCGAGAGATCCACCTGTGCAAGGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS GCA 72 bp | TGGACCAGCTGCACAAAGAGCCCCTTGTCAACAGCCTaGAGGCGAAGTCCAGTCTTGCCACGTTCATCCTTG | + |
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Preference number: 6 (lower is better) Translates to: WTSCTKSPLSTA*RRSPVLPRSSL Trigger: CAAGGATGAACGTGGCAAGACTGGACTTCGCCTGCAGGCTGTTGACAAGGGGCTCTTTGTGCAGCTGGTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS CAA 72 bp | ACGCCAGGCTTGATCTCTGCACGCAGTATACCCAGGTaGTTCCCAGATACTGGAGCTACCACCTGGCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: TPGLISARSIPR*FPDTGATTWPG Trigger: ACCTGGCCAGGTGGTAGCTCCAGTATCTGGGAACAACCTGGGTATACTGCGTGCAGAGATCAAGCCTGGCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS CAA 72 bp | TCATCCTTGCACAGGTGGATCTCTCGCACGCCAGGCTaGATCTCTGCACGCAGTATACCCAGGTTGTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: SSLHRWISRTPG*ISARSIPRLFP Trigger: TGGGAACAACCTGGGTATACTGCGTGCAGAGATCAAGCCTGGCGTGCGAGAGATCCACCTGTGCAAGGATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS CAA 90 bp | TTGCCACGTTCATCCTTGCACAGGTGGATCTCTCGCACGCCAGGCTaGATCTCTGCACGCAGTATACCCAGGTTGTTCCCAGATACTGGA | + |
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Preference number: 6 (lower is better) Translates to: LPRSSLHRWISRTPG*ISARSIPRLFPDTG Trigger: TCCAGTATCTGGGAACAACCTGGGTATACTGCGTGCAGAGATCAAGCCTGGCGTGCGAGAGATCCACCTGTGCAAGGATGAACGTGGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS GCA 72 bp | TCACCTCACACACATAGTGGTTGGTTAGAAGTCCATTaGGGGCGGCGGAGCTTCCCTTTACCACAGACACGA | + |
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Preference number: 6 (lower is better) Translates to: SPHTHSGWLEVH*GRRSFPLPQTR Trigger: TCGTGTCTGTGGTAAAGGGAAGCTCCGCCGCCCGCAATGGACTTCTAACCAACCACTATGTGTGTGAGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS TCA 72 bp | ACAATCTTCTCCGCTGATGCCTTCTTCAACACCTTGTaGGCTTTGTGTGTGTTCCACCCAGCACAGTCACAG | + |
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Preference number: 6 (lower is better) Translates to: TIFSADAFFNTL*ALCVFHPAQSQ Trigger: CTGTGACTGTGCTGGGTGGAACACACACAAAGCTCACAAGGTGTTGAAGAAGGCATCAGCGGAGAAGATTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS CAA 72 bp | GGGACAGTCCCATATAACTTTCCAGTTCTGCCAGGTTaGGATACAACTCTGAAAGTGGGGGTGCAGAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: GTVPYNFPVLPG*DTTLKVGVQKP Trigger: TGGCTTCTGCACCCCCACTTTCAGAGTTGTATCCAAACCTGGCAGAACTGGAAAGTTATATGGGACTGTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS CAA 90 bp | AGTGTGATGACATCTCCAGCTGTGGTCAGAATCTCAGTAACCTTTTaGTCCTTTAGCCCAATGACGTTCTGTCCGTTCACCTCACACACA | + |
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Preference number: 6 (lower is better) Translates to: SVMTSPAVVRISVTF*SFSPMTFCPFTSHT Trigger: TGTGTGTGAGGTGAACGGACAGAACGTCATTGGGCTAAAGGACAAAAAGGTTACTGAGATTCTGACCACAGCTGGAGATGTCATCACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS CCA 72 bp | AGGTCCAGGGCTAGTGACCACCATATTGTCACTATCTaGAATCTGAGTCAGGTTCTTCTGAACTTCTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: RSRASDHHIVTI*NLSQVLLNFLA Trigger: AGCCAAGAAGTTCAGAAGAACCTGACTCAGATTCCAGATAGTGACAATATGGTGGTCACTAGCCCTGGACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS CAA 90 bp | CATATTGTCACTATCTGGAATCTGAGTCAGGTTCTTCTGAACTTCTaGGCTAGAGAGGGACAGTCCCATATAACTTTCCAGTTCTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: HIVTIWNLSQVLLNF*AREGQSHITFQFCQ Trigger: CTGGCAGAACTGGAAAGTTATATGGGACTGTCCCTCTCTAGCCAAGAAGTTCAGAAGAACCTGACTCAGATTCCAGATAGTGACAATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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| CDS CAA 72 bp | ACTATCTGGAATCTGAGTCAGGTTCTTCTGAACTTCTaGGCTAGAGAGGGACAGTCCCATATAACTTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: TIWNLSQVLLNF*AREGQSHITFQ Trigger: CTGGAAAGTTATATGGGACTGTCCCTCTCTAGCCAAGAAGTTCAGAAGAACCTGACTCAGATTCCAGATAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028950.9 |
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