Pregenerated sensors for SDC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025743Ensembl transcript IDs: ENSMUST00000070478.4, ENSMUST00000141297.8, ENSMUST00000152591.8
Found 184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGCTGCCCTGTACACTGAAGGAAGCCCTTTCCCTGGGAGGCAATaGAGGAAGAGGTGCAGCCTGGGGACCTGTGCATTTGGCAGGGGG | + |
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Preference number: 1 (lower is better) Translates to: LAALYTEGSPFPGRQ*RKRCSLGTCAFGRG Trigger: CCCCCTGCCAAATGCACAGGTCCCCAGGCTGCACCTCTTCCTGCATTGCCTCCCAGGGAAAGGGCTTCCTTCAGTGTACAGGGCAGCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR GCA 90 bp | GGAGGGTCTGGGACACTGGCTCTCCTCTACGCCCTACCCAGCCCCTaGTGCAGGGAAGATCTTGGCCAAGCTCCCTCCTCCACATCTCAT | + |
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Preference number: 1 (lower is better) Translates to: GGSGTLALLYALPSP*CREDLGQAPSSTSH Trigger: ATGAGATGTGGAGGAGGGAGCTTGGCCAAGATCTTCCCTGCAGCAGGGGCTGGGTAGGGCGTAGAGGAGAGCCAGTGTCCCAGACCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR GCA 90 bp | GCCCAGGGGGTCTGGCCCCAGCATCCTAAGCTCTTGCTGCAGATCTaGTCAGCCAGTCCTGGCTGTCACCCACATGCCTCTGGCAATCAA | + |
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Preference number: 1 (lower is better) Translates to: AQGVWPQHPKLLLQI*SASPGCHPHASGNQ Trigger: TTGATTGCCAGAGGCATGTGGGTGACAGCCAGGACTGGCTGAGCAGATCTGCAGCAAGAGCTTAGGATGCTGGGGCCAGACCCCCTGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR CCA 90 bp | CCTGGGCGGAGCCCACCCTCACAGGCACTTTGGAGACACGTGTCCTaGGAGGCAGAGACAGCTCCTGGCTCAGAGCAGAAAGGAGATACA | + |
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Preference number: 1 (lower is better) Translates to: PGRSPPSQALWRHVS*EAETAPGSEQKGDT Trigger: TGTATCTCCTTTCTGCTCTGAGCCAGGAGCTGTCTCTGCCTCCCAGGACACGTGTCTCCAAAGTGCCTGTGAGGGTGGGCTCCGCCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR GCA 90 bp | TCTCAGGGGGCTCTCTGGAGCCACACTGTCTACGAAGTATTTACATaGATTCACCACGCCGGGGCCAGGCATACCCAAGCACCCACAGGG | + |
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Preference number: 1 (lower is better) Translates to: SQGALWSHTVYEVFT*IHHAGARHTQAPTG Trigger: CCCTGTGGGTGCTTGGGTATGCCTGGCCCCGGCGTGGTGAATGCATGTAAATACTTCGTAGACAGTGTGGCTCCAGAGAGCCCCCTGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR CCA 90 bp | GCGCCTTGGTCCTGGGAGGCCCTAGCTCCCTTCTTGCTTCAAACTTaGCTGGTGGAGGCTAGCCCCAAACTTCTCTATGAGCCACAGTGG | + |
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Preference number: 1 (lower is better) Translates to: APWSWEALAPFLLQT*LVEASPKLLYEPQW Trigger: CCACTGTGGCTCATAGAGAAGTTTGGGGCTAGCCTCCACCAGCCAAGTTTGAAGCAAGAAGGGAGCTAGGGCCTCCCAGGACCAAGGCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR CCA 90 bp | GGAGATACATGGAGACCAGGGACAACCCACACAGCGCCTTGGTCCTaGGAGGCCCTAGCTCCCTTCTTGCTTCAAACTTGGCTGGTGGAG | + |
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Preference number: 1 (lower is better) Translates to: GDTWRPGTTHTAPWS*EALAPFLLQTWLVE Trigger: CTCCACCAGCCAAGTTTGAAGCAAGAAGGGAGCTAGGGCCTCCCAGGACCAAGGCGCTGTGTGGGTTGTCCCTGGTCTCCATGTATCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR TCA 90 bp | AGGGATGCTAGACTGGCCTCACTTACCACTGGCTGCCCTGTACACTaGAGGAAGCCCTTTCCCTGGGAGGCAATGCAGGAAGAGGTGCAG | + |
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Preference number: 1 (lower is better) Translates to: RDARLASLTTGCPVH*RKPFPWEAMQEEVQ Trigger: CTGCACCTCTTCCTGCATTGCCTCCCAGGGAAAGGGCTTCCTTCAGTGTACAGGGCAGCCAGTGGTAAGTGAGGCCAGTCTAGCATCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR CCA 90 bp | ACCTTCAGGTCAAACGCCATGGCCATGAAGCCTAGGCGTTGGCCTTaGAGCCCGGACCCCATACTTAAGACCCACTGCCTCTTCTCTCAG | + |
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Preference number: 1 (lower is better) Translates to: TFRSNAMAMKPRRWP*SPDPILKTHCLFSQ Trigger: CTGAGAGAAGAGGCAGTGGGTCTTAAGTATGGGGTCCGGGCTCCAAGGCCAACGCCTAGGCTTCATGGCCATGGCGTTTGACCTGAAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR CCA 90 bp | TTCCTTCCTCTTGTCCATGGGACACAAGGTCCTGAAGCCCCGGGCTaGAGGGAATGGGACCAAAGAAGGGGTCATAAGGACACAGTCTGG | + |
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Preference number: 1 (lower is better) Translates to: FLPLVHGTQGPEAPG*REWDQRRGHKDTVW Trigger: CCAGACTGTGTCCTTATGACCCCTTCTTTGGTCCCATTCCCTCCAGCCCGGGGCTTCAGGACCTTGTGTCCCATGGACAAGAGGAAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR CCA 90 bp | CTCAGGCTGGTGACAAAGGGCACCCTCCTGTCAAGAGAGAGGCCTTaGGACAGCAGCTCGAGGCCACAGCATCTGGGTGATTTTGAATTG | + |
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Preference number: 1 (lower is better) Translates to: LRLVTKGTLLSRERP*DSSSRPQHLGDFEL Trigger: CAATTCAAAATCACCCAGATGCTGTGGCCTCGAGCTGCTGTCCCAAGGCCTCTCTCTTGACAGGAGGGTGCCCTTTGTCACCAGCCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR CCA 90 bp | ACAGGCACTTTGGAGACACGTGTCCTGGGAGGCAGAGACAGCTCCTaGCTCAGAGCAGAAAGGAGATACATGGAGACCAGGGACAACCCA | + |
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Preference number: 1 (lower is better) Translates to: TGTLETRVLGGRDSS*LRAERRYMETRDNP Trigger: TGGGTTGTCCCTGGTCTCCATGTATCTCCTTTCTGCTCTGAGCCAGGAGCTGTCTCTGCCTCCCAGGACACGTGTCTCCAAAGTGCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR CCA 90 bp | GGCTGGAGGGAATGGGACCAAAGAAGGGGTCATAAGGACACAGTCTaGGGCAGATGGCAGCACCTCTGCTCCTTAGGACAGTCTGTGTTA | + |
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Preference number: 1 (lower is better) Translates to: GWREWDQRRGHKDTV*GRWQHLCSLGQSVL Trigger: TAACACAGACTGTCCTAAGGAGCAGAGGTGCTGCCATCTGCCCCAGACTGTGTCCTTATGACCCCTTCTTTGGTCCCATTCCCTCCAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR CCA 90 bp | AAGAAACCATGTGGTCACCTGACTGAACCTGGGACATGTGAGAGATaGTGGAGGGGTGCCGGCCAGTCACTACCCAAGCTGTGTCCCTTT | + |
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Preference number: 1 (lower is better) Translates to: KKPCGHLTEPGTCER*WRGAGQSLPKLCPF Trigger: AAAGGGACACAGCTTGGGTAGTGACTGGCCGGCACCCCTCCACCATCTCTCACATGTCCCAGGTTCAGTCAGGTGACCACATGGTTTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR CCA 90 bp | TCTCTGGACTCCTTTGGACAGGCTCTGTATGTACCGCACTGTTTCTaGGGCAGGGTGGGAACCCCGCACCCACATTGCACTAGGAAGAAT | + |
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Preference number: 1 (lower is better) Translates to: SLDSFGQALYVPHCF*GRVGTPHPHCTRKN Trigger: ATTCTTCCTAGTGCAATGTGGGTGCGGGGTTCCCACCCTGCCCCAGAAACAGTGCGGTACATACAGAGCCTGTCCAAAGGAGTCCAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR CCA 90 bp | CTAGTCTGGCCCCCAAGAGAGATGAAGCTTAGCTCTTCAGTGCTCTaGCCCCAGCATGTCTTACTCTCTAGGGAAACCAGGGCCCAGAGA | + |
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Preference number: 1 (lower is better) Translates to: LVWPPREMKLSSSVL*PQHVLLSRETRAQR Trigger: TCTCTGGGCCCTGGTTTCCCTAGAGAGTAAGACATGCTGGGGCCAGAGCACTGAAGAGCTAAGCTTCATCTCTCTTGGGGGCCAGACTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR GCA 90 bp | CCTCTTCTCTCAGATGCTGACACATTAAGGATGCTGGTATCAGGATaGCAAACCCATAGCCCCAGGGCCAGAGCCACCCTGAGATGTGAG | + |
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Preference number: 1 (lower is better) Translates to: PLLSDADTLRMLVSG*QTHSPRARATLRCE Trigger: CTCACATCTCAGGGTGGCTCTGGCCCTGGGGCTATGGGTTTGGCATCCTGATACCAGCATCCTTAATGTGTCAGCATCTGAGAGAAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR TCA 90 bp | ACCCAATATGGGCTGATGCCTACAACTCGGTCCTGCCTTCCTCAGTaGCCTGGATGGTTAGAGGAGCCAGATGCAGGACCAATGTGTGTA | + |
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Preference number: 1 (lower is better) Translates to: TQYGLMPTTRSCLPQ*PGWLEEPDAGPMCV Trigger: TACACACATTGGTCCTGCATCTGGCTCCTCTAACCATCCAGGTCACTGAGGAAGGCAGGACCGAGTTGTAGGCATCAGCCCATATTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR GCA 90 bp | GCTCTTGCTGCAGATCTGCTCAGCCAGTCCTGGCTGTCACCCACATaGCTCTGGCAATCAAGGAGAATCAACCTTACACATAGAGTCCCT | + |
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Preference number: 1 (lower is better) Translates to: ALAADLLSQSWLSPT*LWQSRRINLTHRVP Trigger: AGGGACTCTATGTGTAAGGTTGATTCTCCTTGATTGCCAGAGGCATGTGGGTGACAGCCAGGACTGGCTGAGCAGATCTGCAGCAAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR CCA 90 bp | ATCAGCATCAGTGTGGCTGGTATAGGTGTCATGGTGGGGACCAAGTaGAATAGAGTGACTCTGGGGGACCCAATATGGGCTGATGCCTAC | + |
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Preference number: 1 (lower is better) Translates to: ISISVAGIGVMVGTK*NRVTLGDPIWADAY Trigger: GTAGGCATCAGCCCATATTGGGTCCCCCAGAGTCACTCTATTCCACTTGGTCCCCACCATGACACCTATACCAGCCACACTGATGCTGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR CCA 90 bp | GTTCTCTTAAATCGTCCTGGCCTCACCAGGCTAGCCCAGTTTATCTaGGCTGCTCACACCATTAACCTTCAGGTCAAACGCCATGGCCAT | + |
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Preference number: 1 (lower is better) Translates to: VLLNRPGLTRLAQFI*AAHTINLQVKRHGH Trigger: ATGGCCATGGCGTTTGACCTGAAGGTTAATGGTGTGAGCAGCCCAGATAAACTGGGCTAGCCTGGTGAGGCCAGGACGATTTAAGAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR CCA 90 bp | TCTGGCAATCAAGGAGAATCAACCTTACACATAGAGTCCCTAGTCTaGCCCCCAAGAGAGATGAAGCTTAGCTCTTCAGTGCTCTGGCCC | + |
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Preference number: 1 (lower is better) Translates to: SGNQGESTLHIESLV*PPREMKLSSSVLWP Trigger: GGGCCAGAGCACTGAAGAGCTAAGCTTCATCTCTCTTGGGGGCCAGACTAGGGACTCTATGTGTAAGGTTGATTCTCCTTGATTGCCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR CCA 90 bp | TGTCAAGAGAGAGGCCTTGGGACAGCAGCTCGAGGCCACAGCATCTaGGTGATTTTGAATTGGAGGGCTAGATGTACCATGTATTATTGG | + |
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Preference number: 1 (lower is better) Translates to: CQERGLGTAARGHSI*VILNWRARCTMYYW Trigger: CCAATAATACATGGTACATCTAGCCCTCCAATTCAAAATCACCCAGATGCTGTGGCCTCGAGCTGCTGTCCCAAGGCCTCTCTCTTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR CCA 90 bp | GATGTACCATGTATTATTGGTTCTAGAAGCCAGCATGGTGGCCTCTaGAGCAAGAAGAGGACATCAGCAAGCACTGTGGGCCATCTTAAC | + |
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Preference number: 1 (lower is better) Translates to: DVPCIIGSRSQHGGL*SKKRTSASTVGHLN Trigger: GTTAAGATGGCCCACAGTGCTTGCTGATGTCCTCTTCTTGCTCCAGAGGCCACCATGCTGGCTTCTAGAACCAATAATACATGGTACATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR GCA 90 bp | GATCCTGTCCATTACCCAGATGTGGTTCTTCAGTCTGCCCAACTCTaGTGTCAGGGATTCTTTAAAATGAAACAGAAAGAAACCATGTGG | + |
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Preference number: 1 (lower is better) Translates to: DPVHYPDVVLQSAQL*CQGFFKMKQKETMW Trigger: CCACATGGTTTCTTTCTGTTTCATTTTAAAGAATCCCTGACAGCAGAGTTGGGCAGACTGAAGAACCACATCTGGGTAATGGACAGGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR-3UTR GCA 90 bp | GACAGGCTCTGTATGTACCGCACTGTTTCTGGGGCAGGGTGGGAACCCCGCACCTCAGGCCTGGGCTGCTaGTGGGGCCAGGGACTGGGC | + |
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Preference number: 2 (lower is better) Translates to: DRLCMYRTVSGAGWEPRTSGLGC*WGQGLG Trigger: GCCCAGTCCCTGGCCCCAGCAGCAGCCCAGGCCTGA...GGTGCGGGGTTCCCACCCTGCCCCAGAAACAGTGCGGTACATACAGAGCCTGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR-3UTR CCA 90 bp | TACCACTGGCTGCCCTGTACACTGAAGGAAGCCCTTTCCCTGGGAGGCAATGCAGCTGGGGCCAGGGACTaGGCGAGGCGGAGTGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: YHWLPCTLKEALSLGGNAAGARD*ARRSGG Trigger: GCCTCCACTCCGCCTCGCCCAGTCCCTGGCCCCAGC...TGCATTGCCTCCCAGGGAAAGGGCTTCCTTCAGTGTACAGGGCAGCCAGTGGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR-3UTR GCA 90 bp | GTACCGCACTGTTTCTGGGGCAGGGTGGGAACCCCGCACCCACATTGCACTAGGGCCCTACCCAGCCCCTaGTGCAGGGAAGATCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: VPHCFWGRVGTPHPHCTRALPSP*CREDLG Trigger: GCCAAGATCTTCCCTGCAGCAGGGGCTGGGTAGGGC...CCTAGTGCAATGTGGGTGCGGGGTTCCCACCCTGCCCCAGAAACAGTGCGGTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR-3UTR CCA 90 bp | GGTTGCCTCGCCCAGCTGCTGAGCCTCTCTTTCCAAAGCTCTAGTCCCCAAGACCTGGGCGAGGCGGAGTaGAGGCTGCAGGAGGCACTG | + |
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Preference number: 2 (lower is better) Translates to: GCLAQLLSLSFQSSSPQDLGEAE*RLQEAL Trigger: CAGTGCCTCCTGCAGCCTCCACTCCGCCTCGCCCAG...GTCTTGGGGACTAGAGCTTTGGAAAGAGAGGCTCAGCAGCTGGGCGAGGCAACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR-3UTR CCA 90 bp | ACAGGGCACCTGGGGGAAGCCAGGCCATCAGCCCCTCAGATGGTGACACCAGAGGAGGGTCTGGGACACTaGCTCTCCTCTACGCCCTAC | + |
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Preference number: 2 (lower is better) Translates to: TGHLGEARPSAPQMVTPEEGLGH*LSSTPY Trigger: GTAGGGCGTAGAGGAGAGCCAGTGTCCCAGACCCTC...CTCTGGTGTCACCATCTGAGGGGCTGATGGCCTGGCTTCCCCCAGGTGCCCTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR-3UTR CCA 90 bp | CCCAGCATCCTAAGCTCTTGCTGCAGATCTGCTCAGCCAGTCCTGGCTGTCACCTGGGGCCTCCTGCCCTaGTCGTGGTGTCCCCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: PSILSSCCRSAQPVLAVTWGLLP*SWCPLG Trigger: CCCAAGGGGACACCACGACCAGGGCAGGAGGCCCCA...GGTGACAGCCAGGACTGGCTGAGCAGATCTGCAGCAAGAGCTTAGGATGCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR-3UTR TCA 90 bp | GTACCGCACTGTTTCTGGGGCAGGGTGGGAACCCCGCACCCACATTGCACTAGGGTGTCCCTTTGGTGCTaGGAGCTCCTTCGGCATGGC | + |
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Preference number: 2 (lower is better) Translates to: VPHCFWGRVGTPHPHCTRVSLWC*ELLRHG Trigger: GCCATGCCGAAGGAGCTCTCAGCACCAAAGGGACAC...CCTAGTGCAATGTGGGTGCGGGGTTCCCACCCTGCCCCAGAAACAGTGCGGTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR-3UTR TCA 90 bp | GACAGGCTCTGTATGTACCGCACTGTTTCTGGGGCAGGGTGGGAACCCCGCACCGCCTCGCCCAGCTGCTaGGCCTCTCTTTCCAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: DRLCMYRTVSGAGWEPRTASPSC*ASLSKA Trigger: AGCTTTGGAAAGAGAGGCTCAGCAGCTGGGCGAGGC...GGTGCGGGGTTCCCACCCTGCCCCAGAAACAGTGCGGTACATACAGAGCCTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR-3UTR TCA 90 bp | GCTCTTGCTGCAGATCTGCTCAGCCAGTCCTGGCTGTCACCCACATGCCTCTGGGGTGTCCCCTTGGGCTaGGTACCTGGAGGTTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: ALAADLLSQSWLSPTCLWGVPLG*VPGGCL Trigger: GAGGCAACCTCCAGGTACTCAGCCCAAGGGGACACC...CCAGAGGCATGTGGGTGACAGCCAGGACTGGCTGAGCAGATCTGCAGCAAGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR-3UTR GCA 90 bp | GGGAGGAGTGGGAGGGTCTGGGACACTGGCTCTCCTCTACGCCCTACCCAGCCCCCAGAACTGCCAAGTTaGCTGGTCAGTTGTGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: GRSGRVWDTGSPLRPTQPPELPS*LVSCVH Trigger: GTGGACACAACTGACCAGGCAACTTGGCAGTTCTGG...GGGCTGGGTAGGGCGTAGAGGAGAGCCAGTGTCCCAGACCCTCCCACTCCTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR-3UTR TCA 90 bp | GTACCGCACTGTTTCTGGGGCAGGGTGGGAACCCCGCACCCACATTGCACTAGGATGAGCTCAGGCTGGTaGCAAAGGGCACCCTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: VPHCFWGRVGTPHPHCTRMSSGW*QRAPSC Trigger: ACAGGAGGGTGCCCTTTGTCACCAGCCTGAGCTCAT...CCTAGTGCAATGTGGGTGCGGGGTTCCCACCCTGCCCCAGAAACAGTGCGGTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR-3UTR GCA 90 bp | GGTTGCCTCGCCCAGCTGCTGAGCCTCTCTTTCCAAAGCTCTAGTCCCCAAGACAGGCGGAGTGGAGGCTaGAGGAGGCACTGTGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: GCLAQLLSLSFQSSSPQDRRSGG*RRHCGS Trigger: AGAGCCACAGTGCCTCCTGCAGCCTCCACTCCGCCT...GTCTTGGGGACTAGAGCTTTGGAAAGAGAGGCTCAGCAGCTGGGCGAGGCAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR-3UTR GCA 90 bp | TACCACTGGCTGCCCTGTACACTGAAGGAAGCCCTTTCCCTGGGAGGCAATGCACAGCCTGGGGACCTGTaGATTTGGCAGGGGGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: YHWLPCTLKEALSLGGNAQPGDL*IWQGEG Trigger: CCCCTCCCCCTGCCAAATGCACAGGTCCCCAGGCTG...TGCATTGCCTCCCAGGGAAAGGGCTTCCTTCAGTGTACAGGGCAGCCAGTGGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR-3UTR GCA 90 bp | GACAGGCTCTGTATGTACCGCACTGTTTCTGGGGCAGGGTGGGAACCCCGCACCGGGGGAGGGAGAGCCTaGATTAACTGTGTGGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: DRLCMYRTVSGAGWEPRTGGGRA*INCVGL Trigger: CAAGCCCACACAGTTAATGCAGGCTCTCCCTCCCCC...GGTGCGGGGTTCCCACCCTGCCCCAGAAACAGTGCGGTACATACAGAGCCTGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR-3UTR CCA 90 bp | GTACCGCACTGTTTCTGGGGCAGGGTGGGAACCCCGCACCCACATTGCACTAGGTTGACGGAGGCTATGTaGCATCCCCTCTCAGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: VPHCFWGRVGTPHPHCTRLTEAM*HPLSGG Trigger: CCCTCCTGAGAGGGGATGCCACATAGCCTCCGTCAA...CCTAGTGCAATGTGGGTGCGGGGTTCCCACCCTGCCCCAGAAACAGTGCGGTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR-3UTR GCA 90 bp | ACAGGGCACCTGGGGGAAGCCAGGCCATCAGCCCCTCAGATGGTGACACCAGAGATGCTGGTATCAGGATaGCAAACCCATAGCCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: TGHLGEARPSAPQMVTPEMLVSG*QTHSPR Trigger: CCTGGGGCTATGGGTTTGGCATCCTGATACCAGCAT...CTCTGGTGTCACCATCTGAGGGGCTGATGGCCTGGCTTCCCCCAGGTGCCCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR-3UTR CCA 90 bp | GTACCGCACTGTTTCTGGGGCAGGGTGGGAACCCCGCACCCACATTGCACTAGGGGCAGAGACAGCTCCTaGCTCAGAGCAGAAAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: VPHCFWGRVGTPHPHCTRGRDSS*LRAERR Trigger: TCTCCTTTCTGCTCTGAGCCAGGAGCTGTCTCTGCC...CCTAGTGCAATGTGGGTGCGGGGTTCCCACCCTGCCCCAGAAACAGTGCGGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR-3UTR CCA 90 bp | GTTGGCCTTGGAGCCCGGACCCCATACTTAAGACCCACTGCCTCTTCTCTCAGAGGGACATGTGAGAGATaGTGGAGGGGTGCCGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: VGLGARTPYLRPTASSLRGTCER*WRGAGQ Trigger: CTGGCCGGCACCCCTCCACCATCTCTCACATGTCCC...TCTGAGAGAAGAGGCAGTGGGTCTTAAGTATGGGGTCCGGGCTCCAAGGCCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGCCACACTGTCTACGAAGTATTTACATGCATTCACCACGCCGGGGCCAGCACCCACAGGGCACCTaGGGGAAGCCAGGCCATCAG | + |
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Preference number: 2 (lower is better) Translates to: LEPHCLRSIYMHSPRRGQHPQGT*GKPGHQ Trigger: CTGATGGCCTGGCTTCCCCCAGGTGCCCTGTGGGTG...CTGGCCCCGGCGTGGTGAATGCATGTAAATACTTCGTAGACAGTGTGGCTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR-3UTR TCA 90 bp | TCTTCAGTGCTCTGGCCCCAGCATGTCTTACTCTCTAGGGAAACCAGGGCCCAGGGTGGTGCATCTGTGTaGTGTCTCGCTGGCTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: SSVLWPQHVLLSRETRAQGGASV*CLAGWV Trigger: CACCCAGCCAGCGAGACATCACACAGATGCACCACC...CTGGGCCCTGGTTTCCCTAGAGAGTAAGACATGCTGGGGCCAGAGCACTGAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR-3UTR TCA 90 bp | CTGGAGCCACACTGTCTACGAAGTATTTACATGCATTCACCACGCCGGGGCCAGGAGCCACAACTGCCCTaGGAGCAGCGTTGGCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: LEPHCLRSIYMHSPRRGQEPQLP*EQRWLC Trigger: GCAGAGCCAACGCTGCTCTCAGGGCAGTTGTGGCTC...CTGGCCCCGGCGTGGTGAATGCATGTAAATACTTCGTAGACAGTGTGGCTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR-3UTR CCA 90 bp | TTACAGACACCAAGGCTGGGAGGCACATCCCAGGAGAAAGCCAGGACAGCCCAGTGGAGACACGTGTCCTaGGAGGCAGAGACAGCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: LQTPRLGGTSQEKARTAQWRHVS*EAETAP Trigger: AGGAGCTGTCTCTGCCTCCCAGGACACGTGTCTCCA...CTGGGCTGTCCTGGCTTTCTCCTGGGATGTGCCTCCCAGCCTTGGTGTCTGTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR-3UTR CCA 90 bp | GGTTGCCTCGCCCAGCTGCTGAGCCTCTCTTTCCAAAGCTCTAGTCCCCAAGACAGGAGTGGGAGGGTCTaGGACACTGGCTCTCCTCTA | + |
|
Preference number: 2 (lower is better) Translates to: GCLAQLLSLSFQSSSPQDRSGRV*DTGSPL Trigger: TAGAGGAGAGCCAGTGTCCCAGACCCTCCCACTCCT...GTCTTGGGGACTAGAGCTTTGGAAAGAGAGGCTCAGCAGCTGGGCGAGGCAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR-3UTR TCA 90 bp | GTTGGCCTTGGAGCCCGGACCCCATACTTAAGACCCACTGCCTCTTCTCTCAGATGGCTGAGCACTGCGTaGAGGTGGTGCATCTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: VGLGARTPYLRPTASSLRWLSTA*RWCICV Trigger: CACACAGATGCACCACCTTCACGCAGTGCTCAGCCA...TCTGAGAGAAGAGGCAGTGGGTCTTAAGTATGGGGTCCGGGCTCCAAGGCCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR-3UTR TCA 90 bp | GGTTGCCTCGCCCAGCTGCTGAGCCTCTCTTTCCAAAGCTCTAGTCCCCAAGACAAGCATCAGGATGGCTaGGCACTGCGTGAAGGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: GCLAQLLSLSFQSSSPQDKHQDG*ALREGG Trigger: ACCACCTTCACGCAGTGCTCAGCCATCCTGATGCTT...GTCTTGGGGACTAGAGCTTTGGAAAGAGAGGCTCAGCAGCTGGGCGAGGCAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR-3UTR TCA 90 bp | TTACAGACACCAAGGCTGGGAGGCACATCCCAGGAGAAAGCCAGGACAGCCCAGAACTGTGTGGGCTTGTaGCTGACGTCAGCTGGGATC | + |
|
Preference number: 2 (lower is better) Translates to: LQTPRLGGTSQEKARTAQNCVGL*LTSAGI Trigger: GATCCCAGCTGACGTCAGTCACAAGCCCACACAGTT...CTGGGCTGTCCTGGCTTTCTCCTGGGATGTGCCTCCCAGCCTTGGTGTCTGTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR-3UTR CCA 90 bp | CTCGCCCAGCTGCTGAGCCTCTCTTTCCAAAGCTCTAGTCCCCAAGACTGCAGCACAGTCTGGGGCAGATaGCAGCACCTCTGCTCCTTA | + |
|
Preference number: 2 (lower is better) Translates to: LAQLLSLSFQSSSPQDCSTVWGR*QHLCSL Trigger: TAAGGAGCAGAGGTGCTGCCATCTGCCCCAGACTGT...GCTGCAGTCTTGGGGACTAGAGCTTTGGAAAGAGAGGCTCAGCAGCTGGGCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR-3UTR CCA 90 bp | TACCACTGGCTGCCCTGTACACTGAAGGAAGCCCTTTCCCTGGGAGGCAATGCATCAAGAGAGAGGCCTTaGGACAGCAGCTCGAGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: YHWLPCTLKEALSLGGNASRERP*DSSSRP Trigger: TGGCCTCGAGCTGCTGTCCCAAGGCCTCTCTCTTGA...TGCATTGCCTCCCAGGGAAAGGGCTTCCTTCAGTGTACAGGGCAGCCAGTGGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR-3UTR CCA 90 bp | CCCAGCATCCTAAGCTCTTGCTGCAGATCTGCTCAGCCAGTCCTGGCTGTCACCCTGGGGGACCCAATATaGGCTGATGCCTACAACTCG | + |
|
Preference number: 2 (lower is better) Translates to: PSILSSCCRSAQPVLAVTLGDPI*ADAYNS Trigger: CGAGTTGTAGGCATCAGCCCATATTGGGTCCCCCAG...GGTGACAGCCAGGACTGGCTGAGCAGATCTGCAGCAAGAGCTTAGGATGCTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR-3UTR CCA 90 bp | GTTGGCCTTGGAGCCCGGACCCCATACTTAAGACCCACTGCCTCTTCTCTCAGACTCTATGAGCCACAGTaGGGGAGGGAGAGCCTGCAT | + |
|
Preference number: 2 (lower is better) Translates to: VGLGARTPYLRPTASSLRLYEPQ*GRESLH Trigger: ATGCAGGCTCTCCCTCCCCCACTGTGGCTCATAGAG...TCTGAGAGAAGAGGCAGTGGGTCTTAAGTATGGGGTCCGGGCTCCAAGGCCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR-3UTR CCA 90 bp | TCTTCAGTGCTCTGGCCCCAGCATGTCTTACTCTCTAGGGAAACCAGGGCCCAGCCCTCACAGGCACTTTaGAGACACGTGTCCTGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: SSVLWPQHVLLSRETRAQPSQAL*RHVSWE Trigger: CTCCCAGGACACGTGTCTCCAAAGTGCCTGTGAGGG...CTGGGCCCTGGTTTCCCTAGAGAGTAAGACATGCTGGGGCCAGAGCACTGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR CAA 90 bp | ACAACCCACACAGCGCCTTGGTCCTGGGAGGCCCTAGCTCCCTTCTaGCTTCAAACTTGGCTGGTGGAGGCTAGCCCCAAACTTCTCTAT | + |
|
Preference number: 2 (lower is better) Translates to: TTHTAPWSWEALAPF*LQTWLVEASPKLLY Trigger: ATAGAGAAGTTTGGGGCTAGCCTCCACCAGCCAAGTTTGAAGCAAGAAGGGAGCTAGGGCCTCCCAGGACCAAGGCGCTGTGTGGGTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR-3UTR CCA 90 bp | GTTGGCCTTGGAGCCCGGACCCCATACTTAAGACCCACTGCCTCTTCTCTCAGAAGGAAGCCCTTTCCCTaGGAGGCAATGCAGGAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: VGLGARTPYLRPTASSLRRKPFP*EAMQEE Trigger: CTCTTCCTGCATTGCCTCCCAGGGAAAGGGCTTCCT...TCTGAGAGAAGAGGCAGTGGGTCTTAAGTATGGGGTCCGGGCTCCAAGGCCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR-3UTR CCA 90 bp | GGTTGCCTCGCCCAGCTGCTGAGCCTCTCTTTCCAAAGCTCTAGTCCCCAAGACGGAGTCATGGAGGTCTaGAAGACAGAACAGAGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: GCLAQLLSLSFQSSSPQDGVMEV*KTEQSL Trigger: CAGGCTCTGTTCTGTCTTCCAGACCTCCATGACTCC...GTCTTGGGGACTAGAGCTTTGGAAAGAGAGGCTCAGCAGCTGGGCGAGGCAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR-3UTR TCA 90 bp | CTGTGTGATGTCTCGCTGGCTGGGTGGTCAGGACTGGGTATGTTTTTGTCTCCTGCGGTGACCCCATCATaGGCTCAGGCTGGTGACAAA | + |
|
Preference number: 2 (lower is better) Translates to: LCDVSLAGWSGLGMFLSPAVTPS*AQAGDK Trigger: TTTGTCACCAGCCTGAGCTCATGATGGGGTCACCGC...AGGAGACAAAAACATACCCAGTCCTGACCACCCAGCCAGCGAGACATCACACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR-3UTR CCA 90 bp | TTACAGACACCAAGGCTGGGAGGCACATCCCAGGAGAAAGCCAGGACAGCCCAGCGAGGCCACAGCATCTaGGTGATTTTGAATTGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: LQTPRLGGTSQEKARTAQRGHSI*VILNWR Trigger: CCTCCAATTCAAAATCACCCAGATGCTGTGGCCTCG...CTGGGCTGTCCTGGCTTTCTCCTGGGATGTGCCTCCCAGCCTTGGTGTCTGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR-3UTR CCA 90 bp | GGTTGCCTCGCCCAGCTGCTGAGCCTCTCTTTCCAAAGCTCTAGTCCCCAAGACCCATCAAGGGAGTCATaGAGGTCTGGAAGACAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: GCLAQLLSLSFQSSSPQDPSRES*RSGRQN Trigger: GTTCTGTCTTCCAGACCTCCATGACTCCCTTGATGG...GTCTTGGGGACTAGAGCTTTGGAAAGAGAGGCTCAGCAGCTGGGCGAGGCAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR CAA 90 bp | CCTGGTGGGCTATGGGTTCATCTGGATATAGCCAGAACTGCCAAGTaGCCTGGTCAGTTGTGTCCACAGAAAGGACCCAGGGTAGGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: PGGLWVHLDIARTAK*PGQLCPQKGPRVGR Trigger: CCTACCTACCCTGGGTCCTTTCTGTGGACACAACTGACCAGGCAACTTGGCAGTTCTGGCTATATCCAGATGAACCCATAGCCCACCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR CAA 90 bp | CCCAGAGAAGTCCAGGACACATCACCACCTCTGATTCAGAATGCATaGTGTCTCCAGGCAAGCCGGTGTCCTGAATACCTTCCCAGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: PREVQDTSPPLIQNA*CLQASRCPEYLPRS Trigger: GCTCCTGGGAAGGTATTCAGGACACCGGCTTGCCTGGAGACACAATGCATTCTGAATCAGAGGTGGTGATGTGTCCTGGACTTCTCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR-3UTR TCA 90 bp | GTTGGCCTTGGAGCCCGGACCCCATACTTAAGACCCACTGCCTCTTCTCTCAGACCTTGTCCCCATCAATaGTTCTCAGAGCCTATAGCA | + |
|
Preference number: 2 (lower is better) Translates to: VGLGARTPYLRPTASSLRPCPHQ*FSEPIA Trigger: TGCTATAGGCTCTGAGAATCATTGATGGGGACAAGG...TCTGAGAGAAGAGGCAGTGGGTCTTAAGTATGGGGTCCGGGCTCCAAGGCCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR-3UTR CCA 90 bp | AGTGTGGGCTTCTATTTACAGACACCAAGGCTGGGAGGCACATCCCAGGAGAAACATAAGGACACAGTCTaGGGCAGATGGCAGCACCTC | + |
|
Preference number: 2 (lower is better) Translates to: SVGFYLQTPRLGGTSQEKHKDTV*GRWQHL Trigger: GAGGTGCTGCCATCTGCCCCAGACTGTGTCCTTATG...TTTCTCCTGGGATGTGCCTCCCAGCCTTGGTGTCTGTAAATAGAAGCCCACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR-3UTR CCA 90 bp | CTGTGTGATGTCTCGCTGGCTGGGTGGTCAGGACTGGGTATGTTTTTGTCTCCTCAGCATGGTGGCCTCTaGAGCAAGAAGAGGACATCA | + |
|
Preference number: 2 (lower is better) Translates to: LCDVSLAGWSGLGMFLSPQHGGL*SKKRTS Trigger: TGATGTCCTCTTCTTGCTCCAGAGGCCACCATGCTG...AGGAGACAAAAACATACCCAGTCCTGACCACCCAGCCAGCGAGACATCACACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR-3UTR CCA 90 bp | CTGGAGCCACACTGTCTACGAAGTATTTACATGCATTCACCACGCCGGGGCCAGCTGGGTGGTCAGGACTaGGTATGTTTTTGTCTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: LEPHCLRSIYMHSPRRGQLGGQD*VCFCLL Trigger: CAGGAGACAAAAACATACCCAGTCCTGACCACCCAG...CTGGCCCCGGCGTGGTGAATGCATGTAAATACTTCGTAGACAGTGTGGCTCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR-3UTR CCA 90 bp | AGTGTGGGCTTCTATTTACAGACACCAAGGCTGGGAGGCACATCCCAGGAGAAAGTCTCGCTGGCTGGGTaGTCAGGACTGGGTATGTTT | + |
|
Preference number: 2 (lower is better) Translates to: SVGFYLQTPRLGGTSQEKVSLAG*SGLGMF Trigger: AAACATACCCAGTCCTGACCACCCAGCCAGCGAGAC...TTTCTCCTGGGATGTGCCTCCCAGCCTTGGTGTCTGTAAATAGAAGCCCACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR-3UTR CCA 90 bp | CTGGAGCCACACTGTCTACGAAGTATTTACATGCATTCACCACGCCGGGGCCAGCAGAAAGGAGATACATaGAGACCAGGGACAACCCAC | + |
|
Preference number: 2 (lower is better) Translates to: LEPHCLRSIYMHSPRRGQQKGDT*RPGTTH Trigger: GTGGGTTGTCCCTGGTCTCCATGTATCTCCTTTCTG...CTGGCCCCGGCGTGGTGAATGCATGTAAATACTTCGTAGACAGTGTGGCTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTATCTGGGCTGCTCACACCATTAACCTTCAGGTCAAACGCCATGGCCATGCATCAGCAAGCACTGTaGGCCATCTTAACCCTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: SLSGLLTPLTFRSNAMAMHQQAL*AILTLP Trigger: GGGCAGGGTTAAGATGGCCCACAGTGCTTGCTGATG...CATGGCCATGGCGTTTGACCTGAAGGTTAATGGTGTGAGCAGCCCAGATAAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR-3UTR GCA 90 bp | CTAGCCCAGTTTATCTGGGCTGCTCACACCATTAACCTTCAGGTCAAACGCCATTGTGGTTCTTCAGTCTaGCCAACTCTGCTGTCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: LAQFIWAAHTINLQVKRHCGSSV*PTLLSG Trigger: CCCTGACAGCAGAGTTGGGCAGACTGAAGAACCACA...ATGGCGTTTGACCTGAAGGTTAATGGTGTGAGCAGCCCAGATAAACTGGGCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR-3UTR CCA 90 bp | AGTGTGGGCTTCTATTTACAGACACCAAGGCTGGGAGGCACATCCCAGGAGAAAAACTGCCAAGTTGCCTaGTCAGTTGTGTCCACAGAA | + |
|
Preference number: 2 (lower is better) Translates to: SVGFYLQTPRLGGTSQEKNCQVA*SVVSTE Trigger: TTCTGTGGACACAACTGACCAGGCAACTTGGCAGTT...TTTCTCCTGGGATGTGCCTCCCAGCCTTGGTGTCTGTAAATAGAAGCCCACACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR-3UTR CCA 90 bp | GAAGTCCAGGACACATCACCACCTCTGATTCAGAATGCATTGTGTCTCCAGGCAGTAAAGAGAATAGATTaGGAGGAAGGTGGTGTGGTC | + |
|
Preference number: 2 (lower is better) Translates to: EVQDTSPPLIQNALCLQAVKRID*EEGGVV Trigger: GACCACACCACCTTCCTCCCAATCTATTCTCTTTAC...TGCCTGGAGACACAATGCATTCTGAATCAGAGGTGGTGATGTGTCCTGGACTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR CAA 90 bp | TCCTCCTTCTCTTATTTAAGTTTTGGCCATGAACTCAGGACAGGGTaGGTTAATAAACAGGTTATAGGGAGAGAACGGGTAGGAAAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: SSFSYLSFGHELRTG*VNKQVIGRERVGKV Trigger: GACCTTTCCTACCCGTTCTCTCCCTATAACCTGTTTATTAACCAACCCTGTCCTGAGTTCATGGCCAAAACTTAAATAAGAGAAGGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR TCA 72 bp | GGGGCCTCCTGCCCTGGTCGTGGTGTCCCCTTGGGCTaGGTACCTGGAGGTTGCCTCGCCCAGCTGCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: GASCPGRGVPLG*VPGGCLAQLLS Trigger: GCTCAGCAGCTGGGCGAGGCAACCTCCAGGTACTCAGCCCAAGGGGACACCACGACCAGGGCAGGAGGCCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGGAGTGGGAGGGTCTGGGACACTGGCTCTCCTCTACGCCCTACCCAGCCCAACCCACACAGCGCCTaGGTCCTGGGAGGCCCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: GRSGRVWDTGSPLRPTQPNPHSA*VLGGPS Trigger: GCTAGGGCCTCCCAGGACCAAGGCGCTGTGTGGGTT...GGGCTGGGTAGGGCGTAGAGGAGAGCCAGTGTCCCAGACCCTCCCACTCCTCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR CCA 72 bp | AAGCTGGGGCCTCCTGCCCTGGTCGTGGTGTCCCCTTaGGCTGAGTACCTGGAGGTTGCCTCGCCCAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: KLGPPALVVVSP*AEYLEVASPSC Trigger: GCAGCTGGGCGAGGCAACCTCCAGGTACTCAGCCCAAGGGGACACCACGACCAGGGCAGGAGGCCCCAGCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR CCA 72 bp | CTTTCCCTGGGAGGCAATGCAGGAAGAGGTGCAGCCTaGGGACCTGTGCATTTGGCAGGGGGAGGGGGCGGT | + |
|
Preference number: 3 (lower is better) Translates to: LSLGGNAGRGAA*GPVHLAGGGGG Trigger: ACCGCCCCCTCCCCCTGCCAAATGCACAGGTCCCCAGGCTGCACCTCTTCCTGCATTGCCTCCCAGGGAAAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR CCA 72 bp | GCCCAACACAGAAGCTGGGGCCTCCTGCCCTGGTCGTaGTGTCCCCTTGGGCTGAGTACCTGGAGGTTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: AQHRSWGLLPWS*CPLGLSTWRLP Trigger: AGGCAACCTCCAGGTACTCAGCCCAAGGGGACACCACGACCAGGGCAGGAGGCCCCAGCTTCTGTGTTGGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR CCA 72 bp | CAAGACTGCAGCTTACCAGGGAGGAGTGGGAGGGTCTaGGACACTGGCTCTCCTCTACGCCCTACCCAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: QDCSLPGRSGRV*DTGSPLRPTQP Trigger: GGGCTGGGTAGGGCGTAGAGGAGAGCCAGTGTCCCAGACCCTCCCACTCCTCCCTGGTAAGCTGCAGTCTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR TCA 72 bp | AGCCCCAGGGCCAGAGCCACCCTGAGATGTGAGAAGTaGACCCTAGCCCAACACAGAAGCTGGGGCCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SPRARATLRCEK*TLAQHRSWGLL Trigger: CAGGAGGCCCCAGCTTCTGTGTTGGGCTAGGGTTCACTTCTCACATCTCAGGGTGGCTCTGGCCCTGGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR GCA 72 bp | AAGCCCAGGGGGTCTGGCCCCAGCATCCTAAGCTCTTaGTGCAGATCTGCTCAGCCAGTCCTGGCTGTCACC | + |
|
Preference number: 3 (lower is better) Translates to: KPRGSGPSILSS*CRSAQPVLAVT Trigger: GGTGACAGCCAGGACTGGCTGAGCAGATCTGCAGCAAGAGCTTAGGATGCTGGGGCCAGACCCCCTGGGCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR CCA 72 bp | TGGAGACCAGGGACAACCCACACAGCGCCTTGGTCCTaGGAGGCCCTAGCTCCCTTCTTGCTTCAAACTTGG | + |
|
Preference number: 3 (lower is better) Translates to: WRPGTTHTAPWS*EALAPFLLQTW Trigger: CCAAGTTTGAAGCAAGAAGGGAGCTAGGGCCTCCCAGGACCAAGGCGCTGTGTGGGTTGTCCCTGGTCTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR CCA 72 bp | TGTGGTCACCTGACTGAACCTGGGACATGTGAGAGATaGTGGAGGGGTGCCGGCCAGTCACTACCCAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: CGHLTEPGTCER*WRGAGQSLPKL Trigger: CAGCTTGGGTAGTGACTGGCCGGCACCCCTCCACCATCTCTCACATGTCCCAGGTTCAGTCAGGTGACCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR CCA 72 bp | TCAAACGCCATGGCCATGAAGCCTAGGCGTTGGCCTTaGAGCCCGGACCCCATACTTAAGACCCACTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: SNAMAMKPRRWP*SPDPILKTHCL Trigger: GAGGCAGTGGGTCTTAAGTATGGGGTCCGGGCTCCAAGGCCAACGCCTAGGCTTCATGGCCATGGCGTTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR-3UTR CAA 90 bp | TCTTCAGTGCTCTGGCCCCAGCATGTCTTACTCTCTAGGGAAACCAGGGCCCAGGCTGCAGGGAAGATCTaGGCCAAGCTCCCTCCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SSVLWPQHVLLSRETRAQAAGKI*AKLPPP Trigger: TGGAGGAGGGAGCTTGGCCAAGATCTTCCCTGCAGC...CTGGGCCCTGGTTTCCCTAGAGAGTAAGACATGCTGGGGCCAGAGCACTGAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR-3UTR CAA 90 bp | GGTTGCCTCGCCCAGCTGCTGAGCCTCTCTTTCCAAAGCTCTAGTCCCCAAGACGCCAGAACTGCCAAGTaGCCTGGTCAGTTGTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: GCLAQLLSLSFQSSSPQDARTAK*PGQLCP Trigger: TGGACACAACTGACCAGGCAACTTGGCAGTTCTGGC...GTCTTGGGGACTAGAGCTTTGGAAAGAGAGGCTCAGCAGCTGGGCGAGGCAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR-3UTR CAA 90 bp | CTGGAGCCACACTGTCTACGAAGTATTTACATGCATTCACCACGCCGGGGCCAGGCCCTGAGAGCAGCGTaGGCTCTGCTCTCTGAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LEPHCLRSIYMHSPRRGQALRAA*ALLSEA Trigger: AGCTTCAGAGAGCAGAGCCAACGCTGCTCTCAGGGC...CTGGCCCCGGCGTGGTGAATGCATGTAAATACTTCGTAGACAGTGTGGCTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR TCA 72 bp | GGGGGAGGGAGAGCCTGCATTAACTGTGTGGGCTTGTaGCTGACGTCAGCTGGGATCAGCATCAGTGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: GGGRACINCVGL*LTSAGISISVA Trigger: AGCCACACTGATGCTGATCCCAGCTGACGTCAGTCACAAGCCCACACAGTTAATGCAGGCTCTCCCTCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR TCA 72 bp | TGGGCTGAGTACCTGGAGGTTGCCTCGCCCAGCTGCTaGGCCTCTCTTTCCAAAGCTCTAGTCCCCAAGACT | + |
|
Preference number: 3 (lower is better) Translates to: WAEYLEVASPSC*ASLSKALVPKT Trigger: AGTCTTGGGGACTAGAGCTTTGGAAAGAGAGGCTCAGCAGCTGGGCGAGGCAACCTCCAGGTACTCAGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR GCA 72 bp | CTGAGCCTCTCTTTCCAAAGCTCTAGTCCCCAAGACTaGAGCTTACCAGGGAGGAGTGGGAGGGTCTGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LSLSFQSSSPQD*SLPGRSGRVWD Trigger: GTCCCAGACCCTCCCACTCCTCCCTGGTAAGCTGCAGTCTTGGGGACTAGAGCTTTGGAAAGAGAGGCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR CCA 72 bp | TCCTTTGGACAGGCTCTGTATGTACCGCACTGTTTCTaGGGCAGGGTGGGAACCCCGCACCCACATTGCACT | + |
|
Preference number: 3 (lower is better) Translates to: SFGQALYVPHCF*GRVGTPHPHCT Trigger: AGTGCAATGTGGGTGCGGGGTTCCCACCCTGCCCCAGAAACAGTGCGGTACATACAGAGCCTGTCCAAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGCATCCTAAGCTCTTGCTGCAGATCTGCTCAGCCAGTCCTGGCTGTCACCAAGTTGCCTGGTCAGTaGTGTCCACAGAAAGGACCC | + |
|
Preference number: 3 (lower is better) Translates to: PSILSSCCRSAQPVLAVTKLPGQ*CPQKGP Trigger: GGGTCCTTTCTGTGGACACAACTGACCAGGCAACTT...GGTGACAGCCAGGACTGGCTGAGCAGATCTGCAGCAAGAGCTTAGGATGCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR TCA 72 bp | AGACTGGCCTCACTTACCACTGGCTGCCCTGTACACTaGAGGAAGCCCTTTCCCTGGGAGGCAATGCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: RLASLTTGCPVH*RKPFPWEAMQE Trigger: TTCCTGCATTGCCTCCCAGGGAAAGGGCTTCCTTCAGTGTACAGGGCAGCCAGTGGTAAGTGAGGCCAGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR CCA 72 bp | TTGGAGACACGTGTCCTGGGAGGCAGAGACAGCTCCTaGCTCAGAGCAGAAAGGAGATACATGGAGACCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LETRVLGGRDSS*LRAERRYMETR Trigger: CCTGGTCTCCATGTATCTCCTTTCTGCTCTGAGCCAGGAGCTGTCTCTGCCTCCCAGGACACGTGTCTCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR TCA 72 bp | GATGTAGCAGAAGCATCAGGATGGCTGAGCACTGCGTaGAGGTGGTGCATCTGTGTGATGTCTCGCTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: DVAEASGWLSTA*RWCICVMSRWL Trigger: CAGCCAGCGAGACATCACACAGATGCACCACCTTCACGCAGTGCTCAGCCATCCTGATGCTTCTGCTACATC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR TCA 72 bp | CAGGGCCCAGAGAAGTCCAGGACACATCACCACCTCTaGTTCAGAATGCATTGTGTCTCCAGGCAAGCCGGT | + |
|
Preference number: 3 (lower is better) Translates to: QGPEKSRTHHHL*FRMHCVSRQAG Trigger: ACCGGCTTGCCTGGAGACACAATGCATTCTGAATCAGAGGTGGTGATGTGTCCTGGACTTCTCTGGGCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR GCA 72 bp | GCTCTCTGGAGCCACACTGTCTACGAAGTATTTACATaGATTCACCACGCCGGGGCCAGGCATACCCAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: ALWSHTVYEVFT*IHHAGARHTQA Trigger: TGCTTGGGTATGCCTGGCCCCGGCGTGGTGAATGCATGTAAATACTTCGTAGACAGTGTGGCTCCAGAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR CCA 72 bp | GAATGGGACCAAAGAAGGGGTCATAAGGACACAGTCTaGGGCAGATGGCAGCACCTCTGCTCCTTAGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: EWDQRRGHKDTV*GRWQHLCSLGQ Trigger: CTGTCCTAAGGAGCAGAGGTGCTGCCATCTGCCCCAGACTGTGTCCTTATGACCCCTTCTTTGGTCCCATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR CCA 72 bp | TCCTGGGAGGCCCTAGCTCCCTTCTTGCTTCAAACTTaGCTGGTGGAGGCTAGCCCCAAACTTCTCTATGAG | + |
|
Preference number: 3 (lower is better) Translates to: SWEALAPFLLQT*LVEASPKLLYE Trigger: CTCATAGAGAAGTTTGGGGCTAGCCTCCACCAGCCAAGTTTGAAGCAAGAAGGGAGCTAGGGCCTCCCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR GCA 72 bp | CTCCACCCCCACCCCAGAAAGACAAGCTGTGCCAACTaGCTAGATCCTGTCCATTACCCAGATGTGGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LHPHPRKTSCAN*LDPVHYPDVVL Trigger: AAGAACCACATCTGGGTAATGGACAGGATCTAGGCAGTTGGCACAGCTTGTCTTTCTGGGGTGGGGGTGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR CCA 72 bp | AGAGGCCTTGGGACAGCAGCTCGAGGCCACAGCATCTaGGTGATTTTGAATTGGAGGGCTAGATGTACCATG | + |
|
Preference number: 3 (lower is better) Translates to: RGLGTAARGHSI*VILNWRARCTM Trigger: CATGGTACATCTAGCCCTCCAATTCAAAATCACCCAGATGCTGTGGCCTCGAGCTGCTGTCCCAAGGCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR CCA 72 bp | AATCGTCCTGGCCTCACCAGGCTAGCCCAGTTTATCTaGGCTGCTCACACCATTAACCTTCAGGTCAAACGC | + |
|
Preference number: 3 (lower is better) Translates to: NRPGLTRLAQFI*AAHTINLQVKR Trigger: GCGTTTGACCTGAAGGTTAATGGTGTGAGCAGCCCAGATAAACTGGGCTAGCCTGGTGAGGCCAGGACGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR CCA 72 bp | CCCCCAAGAGAGATGAAGCTTAGCTCTTCAGTGCTCTaGCCCCAGCATGTCTTACTCTCTAGGGAAACCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PPREMKLSSSVL*PQHVLLSRETR Trigger: CCTGGTTTCCCTAGAGAGTAAGACATGCTGGGGCCAGAGCACTGAAGAGCTAAGCTTCATCTCTCTTGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR-3UTR CAA 90 bp | AGTGTGGGCTTCTATTTACAGACACCAAGGCTGGGAGGCACATCCCAGGAGAAAGCCCTAGCTCCCTTCTaGCTTCAAACTTGGCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SVGFYLQTPRLGGTSQEKALAPF*LQTWLV Trigger: CACCAGCCAAGTTTGAAGCAAGAAGGGAGCTAGGGC...TTTCTCCTGGGATGTGCCTCCCAGCCTTGGTGTCTGTAAATAGAAGCCCACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR-3UTR CAA 90 bp | CTGGAGCCACACTGTCTACGAAGTATTTACATGCATTCACCACGCCGGGGCCAGTGTCTCTGGACTCCTTaGGACAGGCTCTGTATGTAC | + |
|
Preference number: 3 (lower is better) Translates to: LEPHCLRSIYMHSPRRGQCLWTP*DRLCMY Trigger: GTACATACAGAGCCTGTCCAAAGGAGTCCAGAGACA...CTGGCCCCGGCGTGGTGAATGCATGTAAATACTTCGTAGACAGTGTGGCTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR GCA 72 bp | GCAGATCTGCTCAGCCAGTCCTGGCTGTCACCCACATaGCTCTGGCAATCAAGGAGAATCAACCTTACACAT | + |
|
Preference number: 3 (lower is better) Translates to: ADLLSQSWLSPT*LWQSRRINLTH Trigger: ATGTGTAAGGTTGATTCTCCTTGATTGCCAGAGGCATGTGGGTGACAGCCAGGACTGGCTGAGCAGATCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR CCA 72 bp | GGTTCATCTGGATATAGCCAGAACTGCCAAGTTGCCTaGTCAGTTGTGTCCACAGAAAGGACCCAGGGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: GSSGYSQNCQVA*SVVSTERTQGR Trigger: CCTACCCTGGGTCCTTTCTGTGGACACAACTGACCAGGCAACTTGGCAGTTCTGGCTATATCCAGATGAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR CCA 72 bp | AGTTCACCCTTGGAACTGAGTTCTCTTAAATCGTCCTaGCCTCACCAGGCTAGCCCAGTTTATCTGGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SSPLELSSLKSS*PHQASPVYLGC Trigger: GCAGCCCAGATAAACTGGGCTAGCCTGGTGAGGCCAGGACGATTTAAGAGAACTCAGTTCCAAGGGTGAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR CCA 72 bp | TGTATTATTGGTTCTAGAAGCCAGCATGGTGGCCTCTaGAGCAAGAAGAGGACATCAGCAAGCACTGTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: CIIGSRSQHGGL*SKKRTSASTVG Trigger: GCCCACAGTGCTTGCTGATGTCCTCTTCTTGCTCCAGAGGCCACCATGCTGGCTTCTAGAACCAATAATACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR CCA 72 bp | CCAGATGCAGGACCAATGTGTGTAAAGAGAATAGATTaGGAGGAAGGTGGTGTGGTCGCCACTGGTGACAAT | + |
|
Preference number: 3 (lower is better) Translates to: PDAGPMCVKRID*EEGGVVATGDN Trigger: ATTGTCACCAGTGGCGACCACACCACCTTCCTCCCAATCTATTCTCTTTACACACATTGGTCCTGCATCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR GCA 72 bp | CCTTCCTCAGTGACCTGGATGGTTAGAGGAGCCAGATaGAGGACCAATGTGTGTAAAGAGAATAGATTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: PSSVTWMVRGAR*RTNVCKENRLG Trigger: TCCCAATCTATTCTCTTTACACACATTGGTCCTGCATCTGGCTCCTCTAACCATCCAGGTCACTGAGGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR CCA 72 bp | CAAGGAGAATCAACCTTACACATAGAGTCCCTAGTCTaGCCCCCAAGAGAGATGAAGCTTAGCTCTTCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: QGESTLHIESLV*PPREMKLSSSV Trigger: CACTGAAGAGCTAAGCTTCATCTCTCTTGGGGGCCAGACTAGGGACTCTATGTGTAAGGTTGATTCTCCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTATCTGGGCTGCTCACACCATTAACCTTCAGGTCAAACGCCATGGCCATGTGTAAAGAGAATAGATaGGGAGGAAGGTGGTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SLSGLLTPLTFRSNAMAMCKENR*GGRWCG Trigger: ACCACACCACCTTCCTCCCAATCTATTCTCTTTACA...CATGGCCATGGCGTTTGACCTGAAGGTTAATGGTGTGAGCAGCCCAGATAAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR GCA 72 bp | CATTACCCAGATGTGGTTCTTCAGTCTGCCCAACTCTaGTGTCAGGGATTCTTTAAAATGAAACAGAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: HYPDVVLQSAQL*CQGFFKMKQKE Trigger: TTCTTTCTGTTTCATTTTAAAGAATCCCTGACAGCAGAGTTGGGCAGACTGAAGAACCACATCTGGGTAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| CDS-3UTR TCA 90 bp | ACAGGGCACCTGGGGGAAGCCAGGCCATCAGCCCCTCAGATGGTGACACCAGAGCCAGCGGGGGACTGGTaGCTGGTTCAGGGCTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TGHLGEARPSAPQMVTPEPAGDW*LVQGWG Trigger: ACCCCAGCCCTGAACCAGTCACCAGTCCCCCGCTGG...CTCTGGTGTCACCATCTGAGGGGCTGATGGCCTGGCTTCCCCCAGGTGCCCTGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| CDS-3UTR CCA 90 bp | CCAGGGACAACCCACACAGCGCCTTGGTCCTGGGAGGCCCTAGCTCCCTTCTTGCTGGGCGGGCACCCTTaGGCAGTGTCCCCAGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PGTTHTAPWSWEALAPFLLGGHP*AVSPVE Trigger: CTCCACTGGGGACACTGCCCAAGGGTGCCCGCCCAG...CAAGAAGGGAGCTAGGGCCTCCCAGGACCAAGGCGCTGTGTGGGTTGTCCCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| CDS-3UTR CCA 90 bp | CCAGGGACAACCCACACAGCGCCTTGGTCCTGGGAGGCCCTAGCTCCCTTCTTGCTCCTGGGTGGTGACTaGCCGAGGAAGGGCTCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGTTHTAPWSWEALAPFLLLGGD*PRKGSW Trigger: CCACGAGCCCTTCCTCGGCCAGTCACCACCCAGGAG...CAAGAAGGGAGCTAGGGCCTCCCAGGACCAAGGCGCTGTGTGGGTTGTCCCTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR CAA 72 bp | ACAGCCCAGGGAGCCACAACTGCCCTGAGAGCAGCGTaGGCTCTGCTCTCTGAAGCTCGAGCCCCAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TAQGATTALRAA*ALLSEARAPAR Trigger: CCTGGCTGGGGCTCGAGCTTCAGAGAGCAGAGCCAACGCTGCTCTCAGGGCAGTTGTGGCTCCCTGGGCTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| CDS-3UTR TCA 90 bp | GTTGGCCTTGGAGCCCGGACCCCATACTTAAGACCCACTGCCTCTTCTCTCAGATGTCCCCAGTGGAGGTaGCGGCTTGGCCGCGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VGLGARTPYLRPTASSLRCPQWR*RLGRGS Trigger: GGAGCCGCGGCCAAGCCGTCACCTCCACTGGGGACA...TCTGAGAGAAGAGGCAGTGGGTCTTAAGTATGGGGTCCGGGCTCCAAGGCCAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| CDS-3UTR CCA 90 bp | GCTCTTGCTGCAGATCTGCTCAGCCAGTCCTGGCTGTCACCCACATGCCTCTGGCGGGGGACTGGTGACTaGTTCAGGGCTGGGGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALAADLLSQSWLSPTCLWRGTGD*FRAGVL Trigger: GAGCACCCCAGCCCTGAACCAGTCACCAGTCCCCCG...CCAGAGGCATGTGGGTGACAGCCAGGACTGGCTGAGCAGATCTGCAGCAAGAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| CDS-3UTR TCA 90 bp | TACCACTGGCTGCCCTGTACACTGAAGGAAGCCCTTTCCCTGGGAGGCAATGCACAGGCTCCTGGGTGGTaGCTGGCCGAGGAAGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YHWLPCTLKEALSLGGNAQAPGW*LAEEGL Trigger: GAGCCCTTCCTCGGCCAGTCACCACCCAGGAGCCTG...TGCATTGCCTCCCAGGGAAAGGGCTTCCTTCAGTGTACAGGGCAGCCAGTGGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| CDS-3UTR CCA 90 bp | GCTCTTGCTGCAGATCTGCTCAGCCAGTCCTGGCTGTCACCCACATGCCTCTGGCGGTTGTGGGTAGCATaGCAGGTGCAGTGGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALAADLLSQSWLSPTCLWRLWVA*QVQWAQ Trigger: CTGCGCCCACTGCACCTGCCATGCTACCCACAACCG...CCAGAGGCATGTGGGTGACAGCCAGGACTGGCTGAGCAGATCTGCAGCAAGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR CAA 72 bp | CAAGCCCAGGGGGTCTGGCCCCAGCATCCTAAGCTCTaGCTGCAGATCTGCTCAGCCAGTCCTGGCTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QAQGVWPQHPKL*LQICSASPGCH Trigger: GTGACAGCCAGGACTGGCTGAGCAGATCTGCAGCAAGAGCTTAGGATGCTGGGGCCAGACCCCCTGGGCTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| CDS-3UTR TCA 90 bp | GGTTGCCTCGCCCAGCTGCTGAGCCTCTCTTTCCAAAGCTCTAGTCCCCAAGACTCCAGTATGCTCTTCTaGGGGAGCTGGGCGGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GCLAQLLSLSFQSSSPQDSSMLF*GSWAAE Trigger: CTCGGCCGCCCAGCTCCCTCAGAAGAGCATACTGGA...GTCTTGGGGACTAGAGCTTTGGAAAGAGAGGCTCAGCAGCTGGGCGAGGCAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| CDS-3UTR GCA 90 bp | TTACAGACACCAAGGCTGGGAGGCACATCCCAGGAGAAAGCCAGGACAGCCCAGGGCTGCTGTGGCAGGTaGTGTGGCCATAGTTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LQTPRLGGTSQEKARTAQGCCGR*CGHSWG Trigger: GCCCCAACTATGGCCACAGCACCTGCCACAGCAGCC...CTGGGCTGTCCTGGCTTTCTCCTGGGATGTGCCTCCCAGCCTTGGTGTCTGTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| CDS-3UTR CCA 90 bp | GCTCTTGCTGCAGATCTGCTCAGCCAGTCCTGGCTGTCACCCACATGCCTCTGGCCGAGGAAGGGCTCGTaGCCTCGAGGTAGCTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ALAADLLSQSWLSPTCLWPRKGS*PRGSCV Trigger: AACACAGCTACCTCGAGGCCACGAGCCCTTCCTCGG...CCAGAGGCATGTGGGTGACAGCCAGGACTGGCTGAGCAGATCTGCAGCAAGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| CDS-3UTR CCA 90 bp | CCAGGGACAACCCACACAGCGCCTTGGTCCTGGGAGGCCCTAGCTCCCTTCTTGGGTCAGAAGGGACTCTaGAGTTGGGGTCTGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PGTTHTAPWSWEALAPFLGQKGL*SWGLSH Trigger: ATGGCTCAGACCCCAACTCCAGAGTCCCTTCTGACC...CAAGAAGGGAGCTAGGGCCTCCCAGGACCAAGGCGCTGTGTGGGTTGTCCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| CDS-3UTR CCA 90 bp | GACCAAAGAAGGGGTCATAAGGACACAGTCTGGGGCAGATGGCAGCACCTCTGCCAGCCACCACCTCATTaGCCGTGTCCGGCTGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DQRRGHKDTVWGRWQHLCQPPPH*PCPAAW Trigger: CCACGCAGCCGGACACGGCCAATGAGGTGGTGGCTG...GCAGAGGTGCTGCCATCTGCCCCAGACTGTGTCCTTATGACCCCTTCTTTGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| CDS-3UTR GCA 90 bp | CTCGCCCAGCTGCTGAGCCTCTCTTTCCAAAGCTCTAGTCCCCAAGACTGCAGCCCTTCCGCTCCAGTATaGTCTTCTGAGGGAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LAQLLSLSFQSSSPQDCSPSAPV*SSEGAG Trigger: CCCAGCTCCCTCAGAAGAGCATACTGGAGCGGAAGG...GCTGCAGTCTTGGGGACTAGAGCTTTGGAAAGAGAGGCTCAGCAGCTGGGCGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| CDS-3UTR CCA 90 bp | CCCCATCATGAGCTCAGGCTGGTGACAAAGGGCACCCTCCTGTCAAGAGAGAGGGCTCATCCTGGATGGTaGTCAGAAGGGACTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PHHELRLVTKGTLLSRERAHPGW*SEGTLE Trigger: CTCCAGAGTCCCTTCTGACCACCATCCAGGATGAGC...CCTCTCTCTTGACAGGAGGGTGCCCTTTGTCACCAGCCTGAGCTCATGATGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| CDS-3UTR CCA 90 bp | TTACAGACACCAAGGCTGGGAGGCACATCCCAGGAGAAAGCCAGGACAGCCCAGCCGTGTCCGGCTGCGTaGTCTCTTCTTGAAGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LQTPRLGGTSQEKARTAQPCPAA*SLLEAQ Trigger: TTGAGCTTCAAGAAGAGACCACGCAGCCGGACACGG...CTGGGCTGTCCTGGCTTTCTCCTGGGATGTGCCTCCCAGCCTTGGTGTCTGTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| CDS-3UTR TCA 90 bp | AGTGTGGGCTTCTATTTACAGACACCAAGGCTGGGAGGCACATCCCAGGAGAAACGAGTCGTCATCCCCTaGGCCCTCAAGATCCACCGG | + |
|
Preference number: 4 (lower is better) Translates to: SVGFYLQTPRLGGTSQEKRVVIP*ALKIHR Trigger: CCGGTGGATCTTGAGGGCTCAGGGGATGACGACTCG...TTTCTCCTGGGATGTGCCTCCCAGCCTTGGTGTCTGTAAATAGAAGCCCACACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| CDS-3UTR GCA 90 bp | AGTTTATCTGGGCTGCTCACACCATTAACCTTCAGGTCAAACGCCATGGCCATGAGGGGCAGTGGTGGCTaGTGTGGCAGGTGCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLSGLLTPLTFRSNAMAMRGSGG*CGRCCG Trigger: GCCACAGCACCTGCCACAGCAGCCACCACTGCCCCT...CATGGCCATGGCGTTTGACCTGAAGGTTAATGGTGTGAGCAGCCCAGATAAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| CDS-3UTR CCA 90 bp | GGTTGCCTCGCCCAGCTGCTGAGCCTCTCTTTCCAAAGCTCTAGTCCCCAAGACTGCTTGTCAGGTTTCTaGTACGTGACGCTTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GCLAQLLSLSFQSSSPQDCLSGF*YVTLAC Trigger: GCAGGCAAGCGTCACGTACCAGAAACCTGACAAGCA...GTCTTGGGGACTAGAGCTTTGGAAAGAGAGGCTCAGCAGCTGGGCGAGGCAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| CDS-3UTR GCA 90 bp | CTAGCCCAGTTTATCTGGGCTGCTCACACCATTAACCTTCAGGTCAAACGCCATGCTGGGCGGCCGAGCTaGCCGAATCGATGGCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: LAQFIWAAHTINLQVKRHAGRPS*PNRWHC Trigger: ACAATGCCATCGATTCGGGCAGCTCGGCCGCCCAGC...ATGGCGTTTGACCTGAAGGTTAATGGTGTGAGCAGCCCAGATAAACTGGGCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| CDS-3UTR CCA 90 bp | AGTTTATCTGGGCTGCTCACACCATTAACCTTCAGGTCAAACGCCATGGCCATGGCATGGCAGGTGCAGTaGGCGCAGCCAGGGCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: SLSGLLTPLTFRSNAMAMAWQVQ*AQPGPY Trigger: ATATGGCCCTGGCTGCGCCCACTGCACCTGCCATGC...CATGGCCATGGCGTTTGACCTGAAGGTTAATGGTGTGAGCAGCCCAGATAAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| CDS-3UTR CCA 90 bp | CTGGAGCCACACTGTCTACGAAGTATTTACATGCATTCACCACGCCGGGGCCAGCTGGCTCATCCTGGATaGTGGTCAGAAGGGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LEPHCLRSIYMHSPRRGQLAHPG*WSEGTL Trigger: CAGAGTCCCTTCTGACCACCATCCAGGATGAGCCAG...CTGGCCCCGGCGTGGTGAATGCATGTAAATACTTCGTAGACAGTGTGGCTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR CAA 72 bp | ACCTTCCCAGGAGCACTGAGGTGTCTCTGGACTCCTTaGGACAGGCTCTGTATGTACCGCACTGTTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TFPGALRCLWTP*DRLCMYRTVSG Trigger: CCCAGAAACAGTGCGGTACATACAGAGCCTGTCCAAAGGAGTCCAGAGACACCTCAGTGCTCCTGGGAAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| CDS-3UTR TCA 90 bp | GAAGTCCAGGACACATCACCACCTCTGATTCAGAATGCATTGTGTCTCCAGGCACACAGTAGTGGGTGGTaGGGGTGCTGCTGGGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: EVQDTSPPLIQNALCLQAHSSGW*GCCWGS Trigger: ACTACCCCAGCAGCACCCTCACCACCCACTACTGTG...TGCCTGGAGACACAATGCATTCTGAATCAGAGGTGGTGATGTGTCCTGGACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| CDS-3UTR CCA 90 bp | TCTTCAGTGCTCTGGCCCCAGCATGTCTTACTCTCTAGGGAAACCAGGGCCCAGATGGTGGTAGCTTTCTaGCTGGACTCTTCTACGACC | + |
|
Preference number: 4 (lower is better) Translates to: SSVLWPQHVLLSRETRAQMVVAF*LDSSTT Trigger: GGTCGTAGAAGAGTCCAGCCAGAAAGCTACCACCAT...CTGGGCCCTGGTTTCCCTAGAGAGTAAGACATGCTGGGGCCAGAGCACTGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| 3UTR CAA 72 bp | CTGGATATAGCCAGAACTGCCAAGTTGCCTGGTCAGTaGTGTCCACAGAAAGGACCCAGGGTAGGTAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LDIARTAKLPGQ*CPQKGPRVGRP Trigger: AGGCCTACCTACCCTGGGTCCTTTCTGTGGACACAACTGACCAGGCAACTTGGCAGTTCTGGCTATATCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| CDS-3UTR GCA 90 bp | CTAGCCCAGTTTATCTGGGCTGCTCACACCATTAACCTTCAGGTCAAACGCCATTCTCGAAGTTCTCATTaGGCCAGCGTTGAGCCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LAQFIWAAHTINLQVKRHSRSSH*ASVEPP Trigger: CGGGGGCTCAACGCTGGCGCAATGAGAACTTCGAGA...ATGGCGTTTGACCTGAAGGTTAATGGTGTGAGCAGCCCAGATAAACTGGGCTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| CDS-3UTR GCA 90 bp | GACCAAAGAAGGGGTCATAAGGACACAGTCTGGGGCAGATGGCAGCACCTCTGCCTTCCAAGGTGTAGCTaGCTTCGTCCTTCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DQRRGHKDTVWGRWQHLCLPRCS*LRPSSS Trigger: TGAAGAAGAAGGACGAAGGCAGCTACACCTTGGAAG...GCAGAGGTGCTGCCATCTGCCCCAGACTGTGTCCTTATGACCCCTTCTTTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| CDS-3UTR TCA 90 bp | AGTCCAGGACACATCACCACCTCTGATTCAGAATGCATTGTGTCTCCAGGCAAGCAGGTTTCTGGTACGTaGCGCTTGCCTGCTTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SPGHITTSDSECIVSPGKQVSGT*RLPAWV Trigger: AACCCAAGCAGGCAAGCGTCACGTACCAGAAACCTG...CTTGCCTGGAGACACAATGCATTCTGAATCAGAGGTGGTGATGTGTCCTGGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| CDS-3UTR GCA 90 bp | GAAGTCCAGGACACATCACCACCTCTGATTCAGAATGCATTGTGTCTCCAGGCAGGTTCAGGGCTGGGGTaGTCAGAAAGGAGTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EVQDTSPPLIQNALCLQAGSGLG*SERSSS Trigger: TGAGGAACTCCTTTCTGAGCACCCCAGCCCTGAACC...TGCCTGGAGACACAATGCATTCTGAATCAGAGGTGGTGATGTGTCCTGGACTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| CDS-3UTR CCA 90 bp | AGTCCAGGACACATCACCACCTCTGATTCAGAATGCATTGTGTCTCCAGGCAAGACCTCTGGCTCATCCTaGATGGTGGTCAGAAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SPGHITTSDSECIVSPGKTSGSS*MVVRRD Trigger: GTCCCTTCTGACCACCATCCAGGATGAGCCAGAGGT...CTTGCCTGGAGACACAATGCATTCTGAATCAGAGGTGGTGATGTGTCCTGGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| CDS-3UTR GCA 90 bp | AGTTTATCTGGGCTGCTCACACCATTAACCTTCAGGTCAAACGCCATGGCCATGCTGGTACGTGACGCTTaGCTGCTTGGGTTCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLSGLLTPLTFRSNAMAMLVRDA*LLGFFQ Trigger: TTGGAAGAACCCAAGCAGGCAAGCGTCACGTACCAG...CATGGCCATGGCGTTTGACCTGAAGGTTAATGGTGTGAGCAGCCCAGATAAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR CAA 72 bp | CTATGGGTTCATCTGGATATAGCCAGAACTGCCAAGTaGCCTGGTCAGTTGTGTCCACAGAAAGGACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LWVHLDIARTAK*PGQLCPQKGPR Trigger: CCTGGGTCCTTTCTGTGGACACAACTGACCAGGCAACTTGGCAGTTCTGGCTATATCCAGATGAACCCATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR CAA 72 bp | GTCCAGGACACATCACCACCTCTGATTCAGAATGCATaGTGTCTCCAGGCAAGCCGGTGTCCTGAATACCTT | + |
|
Preference number: 4 (lower is better) Translates to: VQDTSPPLIQNA*CLQASRCPEYL Trigger: AAGGTATTCAGGACACCGGCTTGCCTGGAGACACAATGCATTCTGAATCAGAGGTGGTGATGTGTCCTGGAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR CAA 72 bp | GGGACAGCAGCTCGAGGCCACAGCATCTGGGTGATTTaGAATTGGAGGGCTAGATGTACCATGTATTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: GTAARGHSIWVI*NWRARCTMYYW Trigger: CCAATAATACATGGTACATCTAGCCCTCCAATTCAAAATCACCCAGATGCTGTGGCCTCGAGCTGCTGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR CAA 72 bp | CCCACTTCTAAGGATAACAGAGACAGGATGGTAGACTaGAGGCCTGTGACACCCTTGTCCCCATCAATGATT | + |
|
Preference number: 4 (lower is better) Translates to: PTSKDNRDRMVD*RPVTPLSPSMI Trigger: AATCATTGATGGGGACAAGGGTGTCACAGGCCTCAAGTCTACCATCCTGTCTCTGTTATCCTTAGAAGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| 3UTR CAA 72 bp | TCTTATTTAAGTTTTGGCCATGAACTCAGGACAGGGTaGGTTAATAAACAGGTTATAGGGAGAGAACGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SYLSFGHELRTG*VNKQVIGRERV Trigger: TACCCGTTCTCTCCCTATAACCTGTTTATTAACCAACCCTGTCCTGAGTTCATGGCCAAAACTTAAATAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| CDS CCA 90 bp | TTGAGCCCCCGCGGCGCGGCCGGCCAGCAGCAGCAGCAGCAGCGGTaGCAGCAACAGCCCGCGGGCCCCGGGCGCATGGGTGGCGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSPRGAAGQQQQQQR*QQQPAGPGRMGGGV Trigger: GACACCGCCACCCATGCGCCCGGGGCCCGCGGGCTGTTGCTGCCACCGCTGCTGCTGCTGCTGCTGGCCGGCCGCGCCGCGGGGGCTCAA 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| CDS CCA 90 bp | CTGGGCGGGCACCCTTGGGCAGTGTCCCCAGTGGAGGTGACGGCTTaGCCGCGGCTCCTTCCACAGCCACCACCTCATTGGCCGTGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: LGGHPWAVSPVEVTA*PRLLPQPPPHWPCP Trigger: CGGACACGGCCAATGAGGTGGTGGCTGTGGAAGGAGCCGCGGCCAAGCCGTCACCTCCACTGGGGACACTGCCCAAGGGTGCCCGCCCAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| CDS GCA 90 bp | CCTTCCGCTCCAGTATGCTCTTCTGAGGGAGCTGGGCGGCCGAGCTaGCCGAATCGATGGCATTGTCGTGGAGGCCAGGGCCTGGGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: PSAPVCSSEGAGRPS*PNRWHCRGGQGLGG Trigger: CCCGCCCAGGCCCTGGCCTCCACGACAATGCCATCGATTCGGGCAGCTCGGCCGCCCAGCTCCCTCAGAAGAGCATACTGGAGCGGAAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| CDS CCA 90 bp | AATCGATGGCATTGTCGTGGAGGCCAGGGCCTGGGCGGGCACCCTTaGGCAGTGTCCCCAGTGGAGGTGACGGCTTGGCCGCGGCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: NRWHCRGGQGLGGHP*AVSPVEVTAWPRLL Trigger: AAGGAGCCGCGGCCAAGCCGTCACCTCCACTGGGGACACTGCCCAAGGGTGCCCGCCCAGGCCCTGGCCTCCACGACAATGCCATCGATT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| CDS CCA 90 bp | GTATGCTCTTCTGAGGGAGCTGGGCGGCCGAGCTGCCCGAATCGATaGCATTGTCGTGGAGGCCAGGGCCTGGGCGGGCACCCTTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VCSSEGAGRPSCPNR*HCRGGQGLGGHPWA Trigger: TGCCCAAGGGTGCCCGCCCAGGCCCTGGCCTCCACGACAATGCCATCGATTCGGGCAGCTCGGCCGCCCAGCTCCCTCAGAAGAGCATAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| CDS GCA 90 bp | CCCCACCCACGATCACGGCTACGAGCACCTCCTTCCGCTCCAGTATaGTCTTCTGAGGGAGCTGGGCGGCCGAGCTGCCCGAATCGATGG | + |
|
Preference number: 5 (lower is better) Translates to: PHPRSRLRAPPSAPV*SSEGAGRPSCPNRW Trigger: CCATCGATTCGGGCAGCTCGGCCGCCCAGCTCCCTCAGAAGAGCATACTGGAGCGGAAGGAGGTGCTCGTAGCCGTGATCGTGGGTGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| CDS CCA 90 bp | AGCAACATCAGGCTCCTGGGTGGTGACTGGCCGAGGAAGGGCTCGTaGCCTCGAGGTAGCTGTGTTGACCAGCCTAGGTGTCGGGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SNIRLLGGDWPRKGS*PRGSCVDQPRCRGL Trigger: GAGGCCCCGACACCTAGGCTGGTCAACACAGCTACCTCGAGGCCACGAGCCCTTCCTCGGCCAGTCACCACCCAGGAGCCTGATGTTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| CDS TCA 90 bp | GTAGCATGGCAGGTGCAGTGGGCGCAGCCAGGGCCATATCAGGGATaGACCGCATGGCCGTCTCAAGGCCGGACTCCTGCTCGAAGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: VAWQVQWAQPGPYQG*TAWPSQGRTPARSS Trigger: GCTACTTCGAGCAGGAGTCCGGCCTTGAGACGGCCATGCGGTTCATCCCTGATATGGCCCTGGCTGCGCCCACTGCACCTGCCATGCTAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| CDS TCA 90 bp | ACGATCACGGCTACGAGCACCTCCTTCCGCTCCAGTATGCTCTTCTaGGGGAGCTGGGCGGCCGAGCTGCCCGAATCGATGGCATTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: TITATSTSFRSSMLF*GSWAAELPESMALS Trigger: CGACAATGCCATCGATTCGGGCAGCTCGGCCGCCCAGCTCCCTCAGAAGAGCATACTGGAGCGGAAGGAGGTGCTCGTAGCCGTGATCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| CDS-3UTR CAA 90 bp | TCTTCAGTGCTCTGGCCCCAGCATGTCTTACTCTCTAGGGAAACCAGGGCCCAGCCCGAATCGATGGCATaGTCGTGGAGGCCAGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSVLWPQHVLLSRETRAQPESMA*SWRPGP Trigger: AGGCCCTGGCCTCCACGACAATGCCATCGATTCGGG...CTGGGCCCTGGTTTCCCTAGAGAGTAAGACATGCTGGGGCCAGAGCACTGAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| CDS CCA 90 bp | GTGGCCGCGGTGGTAGATGTGGTGGTAGAGATGGTGGTAGCTTTCTaGCTGGACTCTTCTACGACCTCTGTCACCTCTGTCACCAGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: VAAVVDVVVEMVVAF*LDSSTTSVTSVTSG Trigger: CCCGCTGGTGACAGAGGTGACAGAGGTCGTAGAAGAGTCCAGCCAGAAAGCTACCACCATCTCTACCACCACATCTACCACCGCGGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070478.4 ENSMUST00000141297.8 ENSMUST00000152591.8 |
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| CDS-3UTR CAA 90 bp | GTTGGCCTTGGAGCCCGGACCCCATACTTAAGACCCACTGCCTCTTCTCTCAGAGCTGGGGTAGTGATCTaGGCTGTGGCAGCTGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VGLGARTPYLRPTASSLRAGVVI*AVAAVV Trigger: GACCACAGCTGCCACAGCCAAGATCACTACCCCAGC...TCTGAGAGAAGAGGCAGTGGGTCTTAAGTATGGGGTCCGGGCTCCAAGGCCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| CDS-3UTR CAA 90 bp | GTTGGCCTTGGAGCCCGGACCCCATACTTAAGACCCACTGCCTCTTCTCTCAGACTCGAGGTAGCTGTGTaGACCAGCCTAGGTGTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: VGLGARTPYLRPTASSLRLEVAV*TSLGVG Trigger: CCCGACACCTAGGCTGGTCAACACAGCTACCTCGAG...TCTGAGAGAAGAGGCAGTGGGTCTTAAGTATGGGGTCCGGGCTCCAAGGCCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| CDS-3UTR CAA 90 bp | GAAGTCCAGGACACATCACCACCTCTGATTCAGAATGCATTGTGTCTCCAGGCACCTGGGCGGGCACCCTaGGGCAGTGTCCCCAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: EVQDTSPPLIQNALCLQAPGRAP*GSVPSG Trigger: TCCACTGGGGACACTGCCCAAGGGTGCCCGCCCAGG...TGCCTGGAGACACAATGCATTCTGAATCAGAGGTGGTGATGTGTCCTGGACTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| CDS-3UTR CAA 90 bp | CCCCATCATGAGCTCAGGCTGGTGACAAAGGGCACCCTCCTGTCAAGAGAGAGGCTGCGTGGTCTCTTCTaGAAGCTCAAAGTCCCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: PHHELRLVTKGTLLSRERLRGLF*KLKVPA Trigger: AGCGGGGACTTTGAGCTTCAAGAAGAGACCACGCAG...CCTCTCTCTTGACAGGAGGGTGCCCTTTGTCACCAGCCTGAGCTCATGATGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| CDS CCA 72 bp | TCTGAGGGAGCTGGGCGGCCGAGCTGCCCGAATCGATaGCATTGTCGTGGAGGCCAGGGCCTGGGCGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SEGAGRPSCPNR*HCRGGQGLGGH Trigger: GTGCCCGCCCAGGCCCTGGCCTCCACGACAATGCCATCGATTCGGGCAGCTCGGCCGCCCAGCTCCCTCAGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| CDS CAA 90 bp | CCTGGGCGGGCACCCTTGGGCAGTGTCCCCAGTGGAGGTGACGGCTaGGCCGCGGCTCCTTCCACAGCCACCACCTCATTGGCCGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PGRAPLGSVPSGGDG*AAAPSTATTSLAVS Trigger: GGACACGGCCAATGAGGTGGTGGCTGTGGAAGGAGCCGCGGCCAAGCCGTCACCTCCACTGGGGACACTGCCCAAGGGTGCCCGCCCAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| CDS CAA 90 bp | GAATCGATGGCATTGTCGTGGAGGCCAGGGCCTGGGCGGGCACCCTaGGGCAGTGTCCCCAGTGGAGGTGACGGCTTGGCCGCGGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ESMALSWRPGPGRAP*GSVPSGGDGLAAAP Trigger: AGGAGCCGCGGCCAAGCCGTCACCTCCACTGGGGACACTGCCCAAGGGTGCCCGCCCAGGCCCTGGCCTCCACGACAATGCCATCGATTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| CDS GCA 72 bp | AGCCCTCAAGATCCACCGGCCTCTCGAAGTTCTCATTaGGCCAGCGTTGAGCCCCCGCGGCGCGGCCGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SPQDPPASRSSH*ASVEPPRRGRP Trigger: TGGCCGGCCGCGCCGCGGGGGCTCAACGCTGGCGCAATGAGAACTTCGAGAGGCCGGTGGATCTTGAGGGCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| CDS GCA 72 bp | CGATCACGGCTACGAGCACCTCCTTCCGCTCCAGTATaGTCTTCTGAGGGAGCTGGGCGGCCGAGCTGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: RSRLRAPPSAPV*SSEGAGRPSCP Trigger: CGGGCAGCTCGGCCGCCCAGCTCCCTCAGAAGAGCATACTGGAGCGGAAGGAGGTGCTCGTAGCCGTGATCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| CDS GCA 72 bp | CCAGTATGCTCTTCTGAGGGAGCTGGGCGGCCGAGCTaGCCGAATCGATGGCATTGTCGTGGAGGCCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PVCSSEGAGRPS*PNRWHCRGGQG Trigger: GCCCTGGCCTCCACGACAATGCCATCGATTCGGGCAGCTCGGCCGCCCAGCTCCCTCAGAAGAGCATACTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| CDS CAA 72 bp | GGCCGAGGAAGGGCTCGTGGCCTCGAGGTAGCTGTGTaGACCAGCCTAGGTGTCGGGGCCTCTGTGTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: GRGRARGLEVAV*TSLGVGASVSK Trigger: CTTGGACACAGAGGCCCCGACACCTAGGCTGGTCAACACAGCTACCTCGAGGCCACGAGCCCTTCCTCGGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| CDS TCA 72 bp | GCTACGAGCACCTCCTTCCGCTCCAGTATGCTCTTCTaGGGGAGCTGGGCGGCCGAGCTGCCCGAATCGATG | + |
|
Preference number: 6 (lower is better) Translates to: ATSTSFRSSMLF*GSWAAELPESM Trigger: CATCGATTCGGGCAGCTCGGCCGCCCAGCTCCCTCAGAAGAGCATACTGGAGCGGAAGGAGGTGCTCGTAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| CDS CCA 72 bp | AGGCTCCTGGGTGGTGACTGGCCGAGGAAGGGCTCGTaGCCTCGAGGTAGCTGTGTTGACCAGCCTAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: RLLGGDWPRKGS*PRGSCVDQPRC Trigger: ACACCTAGGCTGGTCAACACAGCTACCTCGAGGCCACGAGCCCTTCCTCGGCCAGTCACCACCCAGGAGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| CDS CCA 72 bp | CCACAGCCACCACCTCATTGGCCGTGTCCGGCTGCGTaGTCTCTTCTTGAAGCTCAAAGTCCCCGCTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PQPPPHWPCPAA*SLLEAQSPRWA Trigger: GGCCCAGCGGGGACTTTGAGCTTCAAGAAGAGACCACGCAGCCGGACACGGCCAATGAGGTGGTGGCTGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
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| CDS CAA 90 bp | GTGGTGACTGGCCGAGGAAGGGCTCGTGGCCTCGAGGTAGCTGTGTaGACCAGCCTAGGTGTCGGGGCCTCTGTGTCCAAGGTAGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: VVTGRGRARGLEVAV*TSLGVGASVSKVAT Trigger: TGTGGCTACCTTGGACACAGAGGCCCCGACACCTAGGCTGGTCAACACAGCTACCTCGAGGCCACGAGCCCTTCCTCGGCCAGTCACCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| CDS TCA 72 bp | CGACCTCTGTCACCTCTGTCACCAGCGGGGGACTGGTaGCTGGTTCAGGGCTGGGGTGCTCAGAAAGGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: RPLSPLSPAGDW*LVQGWGAQKGV Trigger: AACTCCTTTCTGAGCACCCCAGCCCTGAACCAGTCACCAGTCCCCCGCTGGTGACAGAGGTGACAGAGGTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000070478.4 ENSMUST00000141297.8 ENSMUST00000152591.8 |
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| CDS CCA 72 bp | CTCTGTCACCTCTGTCACCAGCGGGGGACTGGTGACTaGTTCAGGGCTGGGGTGCTCAGAAAGGAGTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LCHLCHQRGTGD*FRAGVLRKEFL Trigger: GAGGAACTCCTTTCTGAGCACCCCAGCCCTGAACCAGTCACCAGTCCCCCGCTGGTGACAGAGGTGACAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000070478.4 ENSMUST00000141297.8 ENSMUST00000152591.8 |
||
| CDS TCA 72 bp | CGTAGAACTCCTCCTGCTTGTCAGGTTTCTGGTACGTaGCGCTTGCCTGCTTGGGTTCTTCCAAGGTGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: RRTPPACQVSGT*RLPAWVLPRCS Trigger: GCTACACCTTGGAAGAACCCAAGCAGGCAAGCGTCACGTACCAGAAACCTGACAAGCAGGAGGAGTTCTACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070478.4 |
||
| CDS CCA 72 bp | GTGGTAGATGTGGTGGTAGAGATGGTGGTAGCTTTCTaGCTGGACTCTTCTACGACCTCTGTCACCTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VVDVVVEMVVAF*LDSSTTSVTSV Trigger: GACAGAGGTGACAGAGGTCGTAGAAGAGTCCAGCCAGAAAGCTACCACCATCTCTACCACCACATCTACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070478.4 ENSMUST00000141297.8 ENSMUST00000152591.8 |
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