Pregenerated sensors for SDC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020592Ensembl transcript IDs: ENSMUST00000020911.14, ENSMUST00000161883.2, ENSMUST00000171158.8
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCAATGTCACGGTGGCCCAGGCCAAGGCCGTGGCCCTGAGTCCATaGCCTGTTGTACGCATGAGCGACAAACTCAGAGACAACACACAA | + |
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Preference number: 1 (lower is better) Translates to: SNVTVAQAKAVALSP*PVVRMSDKLRDNTQ Trigger: TTGTGTGTTGTCTCTGAGTTTGTCGCTCATGCGTACAACAGGGCATGGACTCAGGGCCACGGCCTTGGCCTGGGCCACCGTGACATTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171158.8 |
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| 3UTR CCA 90 bp | AGCAGTCGGGTCCCCTTTCTGTCCAGAGCTGGGTCTCCTCCCATTTaGAGAAACCAAGTCAGAAGAGTGGACGACAGGTGTGGTTGTGGT | + |
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Preference number: 1 (lower is better) Translates to: SSRVPFLSRAGSPPI*RNQVRRVDDRCGCG Trigger: ACCACAACCACACCTGTCGTCCACTCTTCTGACTTGGTTTCTCCAAATGGGAGGAGACCCAGCTCTGGACAGAAAGGGGACCCGACTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
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| 3UTR CCA 90 bp | GGCCATCTAGGTCCAAAGCAGTCGGGTCCCCTTTCTGTCCAGAGCTaGGTCTCCTCCCATTTGGAGAAACCAAGTCAGAAGAGTGGACGA | + |
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Preference number: 1 (lower is better) Translates to: GHLGPKQSGPLSVQS*VSSHLEKPSQKSGR Trigger: TCGTCCACTCTTCTGACTTGGTTTCTCCAAATGGGAGGAGACCCAGCTCTGGACAGAAAGGGGACCCGACTGCTTTGGACCTAGATGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
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| 3UTR CCA 90 bp | GCCTTAAGCCAAGCTTCCCCGAGCTACCAGGGTTTGGGCAAAGGGTaGCTATATCTATACCACCAGTCCAGAGAAGAAGAAGCAGAAGCA | + |
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Preference number: 1 (lower is better) Translates to: ALSQASPSYQGLGKG*LYLYHQSREEEAEA Trigger: TGCTTCTGCTTCTTCTTCTCTGGACTGGTGGTATAGATATAGCCACCCTTTGCCCAAACCCTGGTAGCTCGGGGAAGCTTGGCTTAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
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| 3UTR CCA 90 bp | CCAGAGCTGGGTCTCCTCCCATTTGGAGAAACCAAGTCAGAAGAGTaGACGACAGGTGTGGTTGTGGTAGAAAGATCAGATGCAAGAAAC | + |
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Preference number: 1 (lower is better) Translates to: PELGLLPFGETKSEE*TTGVVVVERSDARN Trigger: GTTTCTTGCATCTGATCTTTCTACCACAACCACACCTGTCGTCCACTCTTCTGACTTGGTTTCTCCAAATGGGAGGAGACCCAGCTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
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| 3UTR TCA 90 bp | TCTGCTGTCCAAATGGACACGTACCATTTATTGCAATTATATGAATaGGCCCAGCCTGAGGCTTGGACACTGTCCCACAAGCCCTCAGCT | + |
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Preference number: 1 (lower is better) Translates to: SAVQMDTYHLLQLYE*AQPEAWTLSHKPSA Trigger: AGCTGAGGGCTTGTGGGACAGTGTCCAAGCCTCAGGCTGGGCTCATTCATATAATTGCAATAAATGGTACGTGTCCATTTGGACAGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
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| 3UTR GCA 90 bp | GTCAGAAGAGTGGACGACAGGTGTGGTTGTGGTAGAAAGATCAGATaGAAGAAACCCTTTGCACCCAAGCTTCTAGGCAGAAGTCAAAGG | + |
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Preference number: 1 (lower is better) Translates to: VRRVDDRCGCGRKIR*KKPFAPKLLGRSQR Trigger: CCTTTGACTTCTGCCTAGAAGCTTGGGTGCAAAGGGTTTCTTGCATCTGATCTTTCTACCACAACCACACCTGTCGTCCACTCTTCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
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| 3UTR TCA 90 bp | CAAAAATGGGGCACCATACAGATAGTCCATACCCTGTTGTACGCATaGGCGACAAACTCAGAGACAACACACAAACTAAGCCTACGTTTT | + |
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Preference number: 1 (lower is better) Translates to: QKWGTIQIVHTLLYA*ATNSETTHKLSLRF Trigger: AAAACGTAGGCTTAGTTTGTGTGTTGTCTCTGAGTTTGTCGCTCATGCGTACAACAGGGTATGGACTATCTGTATGGTGCCCCATTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
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| 3UTR-3UTR GCA 90 bp | TCTCACACAGGCTCTTCCAATGTCACGGTGGCCCAGGCCAAGGCCGTGGCCCTGCTGGAAGGGCCTGGGTaGAGAGGACATGACCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: SHTGSSNVTVAQAKAVALLEGPG*RGHDPV Trigger: CACTGGGTCATGTCCTCTGCACCCAGGCCCTTCCAG...CAGGGCCACGGCCTTGGCCTGGGCCACCGTGACATTGGAAGAGCCTGTGTGAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
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| 3UTR-3UTR CCA 90 bp | CCGAAGCCCCTCTCCTGTCCTCAGGATCCTCCAGCCGCAATAGGCCATCTAGGTGTTCCCAGCACACCCTaGGACCGCTCGGGCAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: PKPLSCPQDPPAAIGHLGVPSTP*DRSGRN Trigger: GTTCCTGCCCGAGCGGTCCCAGGGTGTGCTGGGAAC...ACCTAGATGGCCTATTGCGGCTGGAGGATCCTGAGGACAGGAGAGGGGCTTCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
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| 3UTR-3UTR CCA 90 bp | TATGGCTGGTCAGCCGAAGCCCCTCTCCTGTCCTCAGGATCCTCCAGCCGCAATGAGGACATGACCCAGTaGTGGGGAGGCCAGGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: YGWSAEAPLLSSGSSSRNEDMTQ*WGGQGL Trigger: CAAGCCCTGGCCTCCCCACCACTGGGTCATGTCCTC...ATTGCGGCTGGAGGATCCTGAGGACAGGAGAGGGGCTTCGGCTGACCAGCCATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
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| 3UTR-3UTR CCA 90 bp | CCAAAGCAGTCGGGTCCCCTTTCTGTCCAGAGCTGGGTCTCCTCCCATTTGGAGTCGGGCAGGAACAGCTaGAAGGGCCTGGGTGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: PKQSGPLSVQSWVSSHLESGRNS*KGLGAE Trigger: CTCTGCACCCAGGCCCTTCCAGCTGTTCCTGCCCGA...CTCCAAATGGGAGGAGACCCAGCTCTGGACAGAAAGGGGACCCGACTGCTTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGGAGGGGAATCAGTTCCCAGCACACCCTGGGACCGCTCGGGCAGGAACAGCGGGGAGGCCAGGGCTTaGAGTTTTTCACAGAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: KGGESVPSTPWDRSGRNSGEARA*SFSQKR Trigger: CCTCTTCTGTGAAAAACTTCAAGCCCTGGCCTCCCC...GCTGTTCCTGCCCGAGCGGTCCCAGGGTGTGCTGGGAACTGATTCCCCTCCTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
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| 3UTR-3UTR CCA 90 bp | CGCAATAGGCCATCTAGGTCCAAAGCAGTCGGGTCCCCTTTCTGTCCAGAGCTGGAGGACATGACCCAGTaGTGGGGAGGCCAGGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: RNRPSRSKAVGSPFCPELEDMTQ*WGGQGL Trigger: CAAGCCCTGGCCTCCCCACCACTGGGTCATGTCCTC...CAGCTCTGGACAGAAAGGGGACCCGACTGCTTTGGACCTAGATGGCCTATTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCAAACATGAGGGAGGAAGGCTGTCCCAGGTGTCTGCCCTGCAAAGCAAGTTTGGGAAACATTTCTaGCTCCAGCCTGGGGGCGGG | + |
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Preference number: 2 (lower is better) Translates to: PSKHEGGRLSQVSALQSKFGKHF*LQPGGG Trigger: CCCGCCCCCAGGCTGGAGTCAGAAATGTTTCCCAAA...CTTGCTTTGCAGGGCAGACACCTGGGACAGCCTTCCTCCCTCATGTTTGCTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
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| 3UTR-3UTR CCA 90 bp | TCTCACACAGGCTCTTCCAATGTCACGGTGGCCCAGGCCAAGGCCGTGGCCCTGCCCCACAATGAAAAGTaGATTCCAAGGAGCTCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: SHTGSSNVTVAQAKAVALPHNEK*IPRSSG Trigger: GCCTGAGCTCCTTGGAATCCACTTTTCATTGTGGGG...CAGGGCCACGGCCTTGGCCTGGGCCACCGTGACATTGGAAGAGCCTGTGTGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
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| 3UTR-3UTR TCA 90 bp | TCTTCCAATGTCACGGTGGCCCAGGCCAAGGCCGTGGCCCTGAGTCCATGCACAACCCTGTTGTACGCATaGGCGACAAACTCAGAGACA | + |
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Preference number: 2 (lower is better) Translates to: SSNVTVAQAKAVALSPCTTLLYA*ATNSET Trigger: TGTCTCTGAGTTTGTCGCTCATGCGTACAACAGGGT...TGTGCATGGACTCAGGGCCACGGCCTTGGCCTGGGCCACCGTGACATTGGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
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| 3UTR-3UTR CCA 90 bp | GCACGGCCAACCCTAGCGGTCTCTATGGGTAAGTGCTATGGCTGGTCAGCCGAACACAGAAGAGGCAAGTaGGAGCCTAGTGAGTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: ARPTLAVSMGKCYGWSAEHRRGK*EPSEWQ Trigger: CTGCCACTCACTAGGCTCCCACTTGCCTCTTCTGTG...TTCGGCTGACCAGCCATAGCACTTACCCATAGAGACCGCTAGGGTTGGCCGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCAGAGCTGGGTCTCCTCCCATTTGGAGAAACCAAGTCAGAAGAGTGGACGATCGGGCAGGAACAGCTaGAAGGGCCTGGGTGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: VQSWVSSHLEKPSQKSGRSGRNS*KGLGAE Trigger: CTCTGCACCCAGGCCCTTCCAGCTGTTCCTGCCCGA...TCGTCCACTCTTCTGACTTGGTTTCTCCAAATGGGAGGAGACCCAGCTCTGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
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| 3UTR-3UTR GCA 90 bp | CCCTTTGCACCCAAGCTTCTAGGCAGAAGTCAAAGGAGGGGAATCAGTTCCCAGCTGGAAGGGCCTGGGTaGAGAGGACATGACCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: PFAPKLLGRSQRRGISSQLEGPG*RGHDPV Trigger: CACTGGGTCATGTCCTCTGCACCCAGGCCCTTCCAG...CTGGGAACTGATTCCCCTCCTTTGACTTCTGCCTAGAAGCTTGGGTGCAAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
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| 3UTR-3UTR CCA 90 bp | ACGGGCCGCCAAAAATGGGGCACCATACAGATAGTCCATACCCTGTTGTACGCAGACATGACCCAGTGGTaGGGAGGCCAGGGCTTGAAG | + |
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Preference number: 2 (lower is better) Translates to: TGRQKWGTIQIVHTLLYADMTQW*GGQGLK Trigger: CTTCAAGCCCTGGCCTCCCCACCACTGGGTCATGTC...TGCGTACAACAGGGTATGGACTATCTGTATGGTGCCCCATTTTTGGCGGCCCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
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| 3UTR-3UTR CCA 90 bp | CAGTGTCCCAGCAAACATGAGGGAGGAAGGCTGTCCCAGGTGTCTGCCCTGCAAAAATCAGAGGAACCCTaGACCCAGCCAGGATCCTAC | + |
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Preference number: 2 (lower is better) Translates to: QCPSKHEGGRLSQVSALQKSEEP*TQPGSY Trigger: GTAGGATCCTGGCTGGGTCCAGGGTTCCTCTGATTT...TTGCAGGGCAGACACCTGGGACAGCCTTCCTCCCTCATGTTTGCTGGGACACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
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| 3UTR CAA 90 bp | AAGCAGTCGGGTCCCCTTTCTGTCCAGAGCTGGGTCTCCTCCCATTaGGAGAAACCAAGTCAGAAGAGTGGACGACAGGTGTGGTTGTGG | + |
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Preference number: 2 (lower is better) Translates to: KQSGPLSVQSWVSSH*EKPSQKSGRQVWLW Trigger: CCACAACCACACCTGTCGTCCACTCTTCTGACTTGGTTTCTCCAAATGGGAGGAGACCCAGCTCTGGACAGAAAGGGGACCCGACTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
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| 3UTR-3UTR TCA 90 bp | AGTCGGGTCCCCTTTCTGTCCAGAGCTGGGTCTCCTCCCATTTGGAGAAACCAAGGGGAGGCCAGGGCTTaGAGTTTTTCACAGAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: SRVPFLSRAGSPPIWRNQGEARA*SFSQKR Trigger: CCTCTTCTGTGAAAAACTTCAAGCCCTGGCCTCCCC...TTGGTTTCTCCAAATGGGAGGAGACCCAGCTCTGGACAGAAAGGGGACCCGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
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| 3UTR-3UTR TCA 90 bp | GACTCCAGCCTGGGGGCGGGGCCACAGGAGCTGAAGGTGAACTTGGTTCTTGATGGTCTGCTGGGGCTCTaGACAGAGAAATTAGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: DSSLGAGPQELKVNLVLDGLLGL*TEKLEK Trigger: TTTCTCTAATTTCTCTGTTCAGAGCCCCAGCAGACC...ATCAAGAACCAAGTTCACCTTCAGCTCCTGTGGCCCCGCCCCCAGGCTGGAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
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| 3UTR-3UTR CCA 90 bp | CGCAATAGGCCATCTAGGTCCAAAGCAGTCGGGTCCCCTTTCTGTCCAGAGCTGGAGTGGCAGGGGCTGTaGGGGGAGAAAGAACTATTT | + |
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Preference number: 2 (lower is better) Translates to: RNRPSRSKAVGSPFCPELEWQGL*GEKELF Trigger: AAATAGTTCTTTCTCCCCCCACAGCCCCTGCCACTC...CAGCTCTGGACAGAAAGGGGACCCGACTGCTTTGGACCTAGATGGCCTATTGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
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| 3UTR-3UTR CCA 90 bp | TATGGCTGGTCAGCCGAAGCCCCTCTCCTGTCCTCAGGATCCTCCAGCCGCAATGGGTCTCCTCCCATTTaGAGAAACCAAGTCAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: YGWSAEAPLLSSGSSSRNGSPPI*RNQVRR Trigger: TCTTCTGACTTGGTTTCTCCAAATGGGAGGAGACCC...ATTGCGGCTGGAGGATCCTGAGGACAGGAGAGGGGCTTCGGCTGACCAGCCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
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| 3UTR-3UTR GCA 90 bp | GGCCATCTAGGTCCAAAGCAGTCGGGTCCCCTTTCTGTCCAGAGCTGGGTCTCCGGTAGAAAGATCAGATaGAAGAAACCCTTTGCACCC | + |
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Preference number: 2 (lower is better) Translates to: GHLGPKQSGPLSVQSWVSGRKIR*KKPFAP Trigger: GGGTGCAAAGGGTTTCTTGCATCTGATCTTTCTACC...GGAGACCCAGCTCTGGACAGAAAGGGGACCCGACTGCTTTGGACCTAGATGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
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| 3UTR-3UTR CCA 90 bp | GATGGTACCAAAGGTGGGAGACGCTTGGGCACCCTTGCCACCCCTCCCCCAAAATATTCCACAGTATCCTaGACTAGCCAGCCTACTTAC | + |
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Preference number: 2 (lower is better) Translates to: DGTKGGRRLGTLATPPPKYSTVS*TSQPTY Trigger: GTAAGTAGGCTGGCTAGTCCAGGATACTGTGGAATA...TTTTGGGGGAGGGGTGGCAAGGGTGCCCAAGCGTCTCCCACCTTTGGTACCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
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| 3UTR-3UTR GCA 90 bp | CCCAGCAAACATGAGGGAGGAAGGCTGTCCCAGGTGTCTGCCCTGCAAAGCAAGGGTAGAAAGATCAGATaGAAGAAACCCTTTGCACCC | + |
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Preference number: 2 (lower is better) Translates to: PSKHEGGRLSQVSALQSKGRKIR*KKPFAP Trigger: GGGTGCAAAGGGTTTCTTGCATCTGATCTTTCTACC...CTTGCTTTGCAGGGCAGACACCTGGGACAGCCTTCCTCCCTCATGTTTGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
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| 3UTR-3UTR CCA 90 bp | GTCCAGAGCTGGGTCTCCTCCCATTTGGAGAAACCAAGTCAGAAGAGTGGACGAGAGTGGCAGGGGCTGTaGGGGGAGAAAGAACTATTT | + |
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Preference number: 2 (lower is better) Translates to: VQSWVSSHLEKPSQKSGREWQGL*GEKELF Trigger: AAATAGTTCTTTCTCCCCCCACAGCCCCTGCCACTC...TCGTCCACTCTTCTGACTTGGTTTCTCCAAATGGGAGGAGACCCAGCTCTGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCAAAAGACTCACTCTTTGGGAAACATTTCTGACTCCAGCCTGGGGGCGGGGGTCTCTATGGGTAAGTaGTATGGCTGGTCAGCCGAA | + |
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Preference number: 2 (lower is better) Translates to: KQKTHSLGNISDSSLGAGVSMGK*YGWSAE Trigger: TTCGGCTGACCAGCCATAGCACTTACCCATAGAGAC...CCCCGCCCCCAGGCTGGAGTCAGAAATGTTTCCCAAAGAGTGAGTCTTTTGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
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| 3UTR CAA 90 bp | GAATGTAGATTAGGGAAGCGAGGTGAGGGACACCAGTCAACAGACTaGCCTTACCCCAGTAATAAGGTCTGCTGGGGCTCTGAACAGAGA | + |
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Preference number: 2 (lower is better) Translates to: ECRLGKRGEGHQSTD*PYPSNKVCWGSEQR Trigger: TCTCTGTTCAGAGCCCCAGCAGACCTTATTACTGGGGTAAGGCAAGTCTGTTGACTGGTGTCCCTCACCTCGCTTCCCTAATCTACATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGTATCCTGGACTAGCCAGCCTACTTACGGGCCGCCAAAAATGGGGCACCATACTAAGCCTACGTTTTaGCGTCCAGATTTGGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: TVSWTSQPTYGPPKMGHHTKPTF*RPDLVL Trigger: AAGAACCAAATCTGGACGCCAAAACGTAGGCTTAGT...ATGGTGCCCCATTTTTGGCGGCCCGTAAGTAGGCTGGCTAGTCCAGGATACTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
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| 3UTR-3UTR CCA 90 bp | CTAGAGTCCCAATTACTTAAACCATTTAGAAGAACAGACATCAGGGCCTGTAAATTTCTGACTCCAGCCTaGGGGCGGGGCCACAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: LESQLLKPFRRTDIRACKFLTPA*GRGHRS Trigger: GCTCCTGTGGCCCCGCCCCCAGGCTGGAGTCAGAAA...TTTACAGGCCCTGATGTCTGTTCTTCTAAATGGTTTAAGTAATTGGGACTCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
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| 3UTR-3UTR TCA 90 bp | AGTGCCAGCCATACTCAAGATGTGTCTTGTCAACTTCCGGGAGGAAGGATGACTGGTCTGCTGGGGCTCTaGACAGAGAAATTAGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: SASHTQDVSCQLPGGRMTGLLGL*TEKLEK Trigger: TTTCTCTAATTTCTCTGTTCAGAGCCCCAGCAGACC...AGTCATCCTTCCTCCCGGAAGTTGACAAGACACATCTTGAGTATGGCTGGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGAGTCCATGCCCTGTTGTACGCATGAGCGACAAACTCAGAGACAACACACAACTAAGCCTACGTTTTaGCGTCCAGATTTGGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: PESMPCCTHERQTQRQHTTKPTF*RPDLVL Trigger: AAGAACCAAATCTGGACGCCAAAACGTAGGCTTAGT...TGTGTGTTGTCTCTGAGTTTGTCGCTCATGCGTACAACAGGGCATGGACTCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171158.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGATGTGCTAGAGTCCCAATTACTTAAACCATTTAGAAGAACAGACATCAGGCACAGAAGAGGCAAGTaGGAGCCTAGTGAGTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: QDVLESQLLKPFRRTDIRHRRGK*EPSEWQ Trigger: CTGCCACTCACTAGGCTCCCACTTGCCTCTTCTGTG...CCTGATGTCTGTTCTTCTAAATGGTTTAAGTAATTGGGACTCTAGCACATCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
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| 3UTR-3UTR CCA 90 bp | TCAGGGCCTGTAAAACCTTGGCTGAACTTACCAACTTCCAAAAGAAGTTTAGCCGGTTTGGGCAAAGGGTaGCTATATCTATACCACCAG | + |
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Preference number: 2 (lower is better) Translates to: SGPVKPWLNLPTSKRSLAGLGKG*LYLYHQ Trigger: CTGGTGGTATAGATATAGCCACCCTTTGCCCAAACC...GGCTAAACTTCTTTTGGAAGTTGGTAAGTTCAGCCAAGGTTTTACAGGCCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
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| 3UTR-3UTR TCA 90 bp | CAAGATGTGCTAGAGTCCCAATTACTTAAACCATTTAGAAGAACAGACATCAGGTTCCGGGAGGAAGGATaGCTAGAGATGGTACCAAAG | + |
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Preference number: 2 (lower is better) Translates to: QDVLESQLLKPFRRTDIRFREEG*LEMVPK Trigger: CTTTGGTACCATCTCTAGTCATCCTTCCTCCCGGAA...CCTGATGTCTGTTCTTCTAAATGGTTTAAGTAATTGGGACTCTAGCACATCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
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| 3UTR-3UTR CCA 90 bp | CTAGAGTCCCAATTACTTAAACCATTTAGAAGAACAGACATCAGGGCCTGTAAACCCCACAATGAAAAGTaGATTCCAAGGAGCTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: LESQLLKPFRRTDIRACKPHNEK*IPRSSG Trigger: GCCTGAGCTCCTTGGAATCCACTTTTCATTGTGGGG...TTTACAGGCCCTGATGTCTGTTCTTCTAAATGGTTTAAGTAATTGGGACTCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
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| 3UTR GCA 72 bp | ACGGTGGCCCAGGCCAAGGCCGTGGCCCTGAGTCCATaGCCTGTTGTACGCATGAGCGACAAACTCAGAGAC | + |
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Preference number: 3 (lower is better) Translates to: TVAQAKAVALSP*PVVRMSDKLRD Trigger: GTCTCTGAGTTTGTCGCTCATGCGTACAACAGGGCATGGACTCAGGGCCACGGCCTTGGCCTGGGCCACCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171158.8 |
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| 3UTR CCA 72 bp | GAAGTCAAAGGAGGGGAATCAGTTCCCAGCACACCCTaGGACCGCTCGGGCAGGAACAGCTGGAAGGGCCTG | + |
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Preference number: 3 (lower is better) Translates to: EVKGGESVPSTP*DRSGRNSWKGL Trigger: CAGGCCCTTCCAGCTGTTCCTGCCCGAGCGGTCCCAGGGTGTGCTGGGAACTGATTCCCCTCCTTTGACTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
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| 3UTR GCA 72 bp | ACAGCACGGCCAACCCTAGCGGTCTCTATGGGTAAGTaGTATGGCTGGTCAGCCGAAGCCCCTCTCCTGTCC | + |
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Preference number: 3 (lower is better) Translates to: TARPTLAVSMGK*YGWSAEAPLLS Trigger: GGACAGGAGAGGGGCTTCGGCTGACCAGCCATAGCACTTACCCATAGAGACCGCTAGGGTTGGCCGTGCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
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| 3UTR TCA 72 bp | GTAAGCAAGGGGTGCTCAGCAGTGTCCCAGCAAACATaGGGGAGGAAGGCTGTCCCAGGTGTCTGCCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: VSKGCSAVSQQT*GRKAVPGVCPA Trigger: TGCAGGGCAGACACCTGGGACAGCCTTCCTCCCTCATGTTTGCTGGGACACTGCTGAGCACCCCTTGCTTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
||
| 3UTR CCA 72 bp | CCAACCCTAGCGGTCTCTATGGGTAAGTGCTATGGCTaGTCAGCCGAAGCCCCTCTCCTGTCCTCAGGATCC | + |
|
Preference number: 3 (lower is better) Translates to: PTLAVSMGKCYG*SAEAPLLSSGS Trigger: GGATCCTGAGGACAGGAGAGGGGCTTCGGCTGACCAGCCATAGCACTTACCCATAGAGACCGCTAGGGTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGTCAGCCGAAGCCCCTCTCCTGTCCTCAGGATCCTCCAGCCGCAATAGGCCATGGGGAGGCCAGGGCTaGAAGTTTTTCACAGAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: WSAEAPLLSSGSSSRNRPWGGQG*KFFTEE Trigger: CTCTTCTGTGAAAAACTTCAAGCCCTGGCCTCCCCA...TGGCCTATTGCGGCTGGAGGATCCTGAGGACAGGAGAGGGGCTTCGGCTGACCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGCTCTTCCAATGTCACGGTGGCCCAGGCCAAGGCCGTGGCCCTGAGTCCATGGGTCTCCTCCCATTaGGAGAAACCAAGTCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: TGSSNVTVAQAKAVALSPWVSSH*EKPSQK Trigger: CTTCTGACTTGGTTTCTCCAAATGGGAGGAGACCCA...TGGACTCAGGGCCACGGCCTTGGCCTGGGCCACCGTGACATTGGAAGAGCCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| 3UTR TCA 72 bp | GCCAAGGCCGTGGCCCTGAGTCCATGCACACAGGCATaGCTGGTCAAGAGGTGGCTATTCCACAGTATCCTG | + |
|
Preference number: 3 (lower is better) Translates to: AKAVALSPCTQA*LVKRWLFHSIL Trigger: CAGGATACTGTGGAATAGCCACCTCTTGACCAGTCATGCCTGTGTGCATGGACTCAGGGCCACGGCCTTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
||
| 3UTR CCA 72 bp | GGTCCAAAGCAGTCGGGTCCCCTTTCTGTCCAGAGCTaGGTCTCCTCCCATTTGGAGAAACCAAGTCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: GPKQSGPLSVQS*VSSHLEKPSQK Trigger: CTTCTGACTTGGTTTCTCCAAATGGGAGGAGACCCAGCTCTGGACAGAAAGGGGACCCGACTGCTTTGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| 3UTR CCA 72 bp | TGTCTAGCTGAGTGGCTGAGCAGCCTAGCCAGGAGCTaGAACATCACTGAGCTAAGTAAGCAAGGGGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: CLAEWLSSLARS*NITELSKQGVL Trigger: GAGCACCCCTTGCTTACTTAGCTCAGTGATGTTCCAGCTCCTGGCTAGGCTGCTCAGCCACTCAGCTAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
||
| 3UTR GCA 72 bp | AACATGAGGGAGGAAGGCTGTCCCAGGTGTCTGCCCTaGAAAGCAAGCTTAGCTCTAGTGACCCTAGGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: NMREEGCPRCLP*KASLALVTLGQ Trigger: TTGACCTAGGGTCACTAGAGCTAAGCTTGCTTTGCAGGGCAGACACCTGGGACAGCCTTCCTCCCTCATGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
||
| 3UTR CCA 72 bp | CCTGGACTAGCCAGCCTACTTACGGGCCGCCAAAAATaGGGCACCATACAGATAGTCCATACCCTGTTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: PGLASLLTGRQK*GTIQIVHTLLY Trigger: GTACAACAGGGTATGGACTATCTGTATGGTGCCCCATTTTTGGCGGCCCGTAAGTAGGCTGGCTAGTCCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
||
| 3UTR CCA 72 bp | CATGACTGGTCAAGAGGTGGCTATTCCACAGTATCCTaGACTAGCCAGCCTACTTACGGGCCGCCAAAAATG | + |
|
Preference number: 3 (lower is better) Translates to: HDWSRGGYSTVS*TSQPTYGPPKM Trigger: CATTTTTGGCGGCCCGTAAGTAGGCTGGCTAGTCCAGGATACTGTGGAATAGCCACCTCTTGACCAGTCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
||
| 3UTR-3UTR CAA 90 bp | AGTGCCAGCCATACTCAAGATGTGTCTTGTCAACTTCCGGGAGGAAGGATGACTTGGGGAGGCCAGGGCTaGAAGTTTTTCACAGAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SASHTQDVSCQLPGGRMTWGGQG*KFFTEE Trigger: CTCTTCTGTGAAAAACTTCAAGCCCTGGCCTCCCCA...AGTCATCCTTCCTCCCGGAAGTTGACAAGACACATCTTGAGTATGGCTGGCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| 3UTR CCA 72 bp | CAAGCTTCCCCGAGCTACCAGGGTTTGGGCAAAGGGTaGCTATATCTATACCACCAGTCCAGAGAAGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: QASPSYQGLGKG*LYLYHQSREEE Trigger: TTCTTCTTCTCTGGACTGGTGGTATAGATATAGCCACCCTTTGCCCAAACCCTGGTAGCTCGGGGAAGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
||
| 3UTR CCA 72 bp | ATGAAACACAGGGCACAGATCTTTTGTCTAGCTGAGTaGCTGAGCAGCCTAGCCAGGAGCTGGAACATCACT | + |
|
Preference number: 3 (lower is better) Translates to: MKHRAQIFCLAE*LSSLARSWNIT Trigger: AGTGATGTTCCAGCTCCTGGCTAGGCTGCTCAGCCACTCAGCTAGACAAAAGATCTGTGCCCTGTGTTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
||
| 3UTR GCA 72 bp | GTGGACGACAGGTGTGGTTGTGGTAGAAAGATCAGATaGAAGAAACCCTTTGCACCCAAGCTTCTAGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: VDDRCGCGRKIR*KKPFAPKLLGR Trigger: TCTGCCTAGAAGCTTGGGTGCAAAGGGTTTCTTGCATCTGATCTTTCTACCACAACCACACCTGTCGTCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| 3UTR TCA 72 bp | GGCACCATACAGATAGTCCATACCCTGTTGTACGCATaGGCGACAAACTCAGAGACAACACACAAACTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: GTIQIVHTLLYA*ATNSETTHKLS Trigger: GCTTAGTTTGTGTGTTGTCTCTGAGTTTGTCGCTCATGCGTACAACAGGGTATGGACTATCTGTATGGTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
||
| 3UTR TCA 72 bp | CAAATGGACACGTACCATTTATTGCAATTATATGAATaGGCCCAGCCTGAGGCTTGGACACTGTCCCACAAG | + |
|
Preference number: 3 (lower is better) Translates to: QMDTYHLLQLYE*AQPEAWTLSHK Trigger: CTTGTGGGACAGTGTCCAAGCCTCAGGCTGGGCTCATTCATATAATTGCAATAAATGGTACGTGTCCATTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGGCCTGTAAAACCTTGGCTGAACTTACCAACTTCCAAAAGAAGTTTAGCCCAAAAGACTCACTCTTaGGGAAACATTTCTGACTCC | + |
|
Preference number: 3 (lower is better) Translates to: SGPVKPWLNLPTSKRSLAQKTHS*GNISDS Trigger: GGAGTCAGAAATGTTTCCCAAAGAGTGAGTCTTTTG...GGCTAAACTTCTTTTGGAAGTTGGTAAGTTCAGCCAAGGTTTTACAGGCCCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
||
| CDS-3UTR CCA 90 bp | AGTCAAAGGAGGGGAATCAGTTCCCAGCACACCCTGGGACCGCTCGGGCAGGAAGCTGCTGGTGGGCTCTaGAGCTGTGGGCGTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SQRRGISSQHTLGPLGQEAAGGL*SCGRGC Trigger: ACAGCCACGCCCACAGCTCCAGAGCCCACCAGCAGC...TTCCTGCCCGAGCGGTCCCAGGGTGTGCTGGGAACTGATTCCCCTCCTTTGACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS-3UTR CCA 90 bp | TGGTCAGCCGAAGCCCCTCTCCTGTCCTCAGGATCCTCCAGCCGCAATAGGCCAGGAGCCGAGGTCTCATaGAGGCCAGGTTGCATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: WSAEAPLLSSGSSSRNRPGAEVS*RPGCMP Trigger: GGGCATGCAACCTGGCCTCCATGAGACCTCGGCTCC...TGGCCTATTGCGGCTGGAGGATCCTGAGGACAGGAGAGGGGCTTCGGCTGACCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS-3UTR TCA 90 bp | GGCCATCTAGGTCCAAAGCAGTCGGGTCCCCTTTCTGTCCAGAGCTGGGTCTCCCCCTGGGCCTGGTGGTaGCCTCCTTTTCCTTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GHLGPKQSGPLSVQSWVSPWAWW*PPFPCP Trigger: GGGACAAGGAAAAGGAGGTCACCACCAGGCCCAGGG...GGAGACCCAGCTCTGGACAGAAAGGGGACCCGACTGCTTTGGACCTAGATGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS-3UTR TCA 90 bp | TATGGCTGGTCAGCCGAAGCCCCTCTCCTGTCCTCAGGATCCTCCAGCCGCAATCGTGCGGATGAGATGTaGCAGCTGCCTGGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YGWSAEAPLLSSGSSSRNRADEM*QLPGLW Trigger: CCACAGCCCAGGCAGCTGTCACATCTCATCCGCACG...ATTGCGGCTGGAGGATCCTGAGGACAGGAGAGGGGCTTCGGCTGACCAGCCATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS-3UTR GCA 90 bp | TATGGCTGGTCAGCCGAAGCCCCTCTCCTGTCCTCAGGATCCTCCAGCCGCAATCAGTCTCGGTGTTGCTaGTGGTGGGCTCTGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YGWSAEAPLLSSGSSSRNQSRCC*WWALEL Trigger: CAGCTCCAGAGCCCACCAGCAGCAACACCGAGACTG...ATTGCGGCTGGAGGATCCTGAGGACAGGAGAGGGGCTTCGGCTGACCAGCCATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS-3UTR GCA 90 bp | TCTTCCAATGTCACGGTGGCCCAGGCCAAGGCCGTGGCCCTGAGTCCATGCACATCCAGAGCCCTCTCCTaGGGGAAGCTGATTGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSNVTVAQAKAVALSPCTSRALS*GKLIGS Trigger: ACTGCCAATCAGCTTCCCGCAGGAGAGGGCTCTGGA...TGTGCATGGACTCAGGGCCACGGCCTTGGCCTGGGCCACCGTGACATTGGAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
||
| CDS-3UTR CCA 90 bp | GAATCAGTTCCCAGCACACCCTGGGACCGCTCGGGCAGGAACAGCTGGAAGGGCCGCCATTGGCTTGTTTaGGCTCCTCCAAGGAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: ESVPSTPWDRSGRNSWKGRHWLV*APPRSS Trigger: GCTACTCCTTGGAGGAGCCCAAACAAGCCAATGGCG...GCCCTTCCAGCTGTTCCTGCCCGAGCGGTCCCAGGGTGTGCTGGGAACTGATTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGAGGCCAGGGCTTGAAGTTTTTCACAGAAGAGGCAAGTGGGAGCCTAGTGGCTGCTGGTGGGCTCTaGAGCTGTGGGCGTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WGGQGLKFFTEEASGSLVAAGGL*SCGRGC Trigger: ACAGCCACGCCCACAGCTCCAGAGCCCACCAGCAGC...CACTAGGCTCCCACTTGCCTCTTCTGTGAAAAACTTCAAGCCCTGGCCTCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS-3UTR CCA 90 bp | TGGTCAGCCGAAGCCCCTCTCCTGTCCTCAGGATCCTCCAGCCGCAATAGGCCAGATGTGACAGCTGCCTaGGCTGTGGTGACTCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: WSAEAPLLSSGSSSRNRPDVTAA*AVVTLT Trigger: AGTCAGAGTCACCACAGCCCAGGCAGCTGTCACATC...TGGCCTATTGCGGCTGGAGGATCCTGAGGACAGGAGAGGGGCTTCGGCTGACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS-3UTR CCA 90 bp | GACTCCAGCCTGGGGGCGGGGCCACAGGAGCTGAAGGTGAACTTGGTTCTTGATGTTGACCAGGTGCTGTaGGAGCCGAGGTCTCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: DSSLGAGPQELKVNLVLDVDQVL*EPRSHG Trigger: TCCATGAGACCTCGGCTCCCACAGCACCTGGTCAAC...ATCAAGAACCAAGTTCACCTTCAGCTCCTGTGGCCCCGCCCCCAGGCTGGAGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS-3UTR TCA 90 bp | GGCCATCTAGGTCCAAAGCAGTCGGGTCCCCTTTCTGTCCAGAGCTGGGTCTCCCTGTCCAAAAGGCTCTaGGAAGCACCTGTGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GHLGPKQSGPLSVQSWVSLSKRL*EAPVAP Trigger: AGGAGCCACAGGTGCTTCTCAGAGCCTTTTGGACAG...GGAGACCCAGCTCTGGACAGAAAGGGGACCCGACTGCTTTGGACCTAGATGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS-3UTR TCA 90 bp | GGCCATCTAGGTCCAAAGCAGTCGGGTCCCCTTTCTGTCCAGAGCTGGGTCTCCTCATCCGGTACAGCATaGAAGCCACCAGGCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: GHLGPKQSGPLSVQSWVSSSGTA*KPPGTQ Trigger: CTGTGTGCCTGGTGGCTTTCATGCTGTACCGGATGA...GGAGACCCAGCTCTGGACAGAAAGGGGACCCGACTGCTTTGGACCTAGATGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS-3UTR GCA 90 bp | AAAGGAGGGGAATCAGTTCCCAGCACACCCTGGGACCGCTCGGGCAGGAACAGCCTGGCAAAGCACCTGTaGCAGAGCCAGAGAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KGGESVPSTPWDRSGRNSLAKHL*QSQRSC Trigger: ACAACTTCTCTGGCTCTGGCACAGGTGCTTTGCCAG...GCTGTTCCTGCCCGAGCGGTCCCAGGGTGTGCTGGGAACTGATTCCCCTCCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS-3UTR GCA 90 bp | TGGTCAGCCGAAGCCCCTCTCCTGTCCTCAGGATCCTCCAGCCGCAATAGGCCAATGAGATGTGACAGCTaGCTGGGCTGTGGTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: WSAEAPLLSSGSSSRNRPMRCDS*LGCGDS Trigger: AGAGTCACCACAGCCCAGGCAGCTGTCACATCTCAT...TGGCCTATTGCGGCTGGAGGATCCTGAGGACAGGAGAGGGGCTTCGGCTGACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS-3UTR CCA 90 bp | AGTCGGGTCCCCTTTCTGTCCAGAGCTGGGTCTCCTCCCATTTGGAGAAACCAAGGAGCCGAGGTCTCATaGAGGCCAGGTTGCATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SRVPFLSRAGSPPIWRNQGAEVS*RPGCMP Trigger: GGGCATGCAACCTGGCCTCCATGAGACCTCGGCTCC...TTGGTTTCTCCAAATGGGAGGAGACCCAGCTCTGGACAGAAAGGGGACCCGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS-3UTR CCA 90 bp | GGCCATCTAGGTCCAAAGCAGTCGGGTCCCCTTTCTGTCCAGAGCTGGGTCTCCACACGTCCTTCCAAGTaGAAGGTGTCTGCCGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: GHLGPKQSGPLSVQSWVSTRPSK*KVSAVT Trigger: TGTCACGGCAGACACCTTCCACTTGGAAGGACGTGT...GGAGACCCAGCTCTGGACAGAAAGGGGACCCGACTGCTTTGGACCTAGATGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS-3UTR TCA 90 bp | GATGGTACCAAAGGTGGGAGACGCTTGGGCACCCTTGCCACCCCTCCCCCAAAATCCCCAGAGCCATCCTaGTCTTCAGGAGGAACATTT | + |
|
Preference number: 4 (lower is better) Translates to: DGTKGGRRLGTLATPPPKSPEPS*SSGGTF Trigger: AAATGTTCCTCCTGAAGATCAGGATGGCTCTGGGGA...TTTTGGGGGAGGGGTGGCAAGGGTGCCCAAGCGTCTCCCACCTTTGGTACCATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS-3UTR GCA 90 bp | GGCCAGGGCTTGAAGTTTTTCACAGAAGAGGCAAGTGGGAGCCTAGTGAGTGGCTCCAGAGCCCTCTCCTaGGGGAAGCTGATTGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GQGLKFFTEEASGSLVSGSRALS*GKLIGS Trigger: ACTGCCAATCAGCTTCCCGCAGGAGAGGGCTCTGGA...GCCACTCACTAGGCTCCCACTTGCCTCTTCTGTGAAAAACTTCAAGCCCTGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS-3UTR GCA 90 bp | GACTCCAGCCTGGGGGCGGGGCCACAGGAGCTGAAGGTGAACTTGGTTCTTGATCCTCCAAGGAGTAGCTaGCTTCGTCCTTCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DSSLGAGPQELKVNLVLDPPRSS*LRPSSS Trigger: TGAAGAAGAAGGACGAAGGCAGCTACTCCTTGGAGG...ATCAAGAACCAAGTTCACCTTCAGCTCCTGTGGCCCCGCCCCCAGGCTGGAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS-3UTR CCA 90 bp | CGCAATAGGCCATCTAGGTCCAAAGCAGTCGGGTCCCCTTTCTGTCCAGAGCTGCGCCATTGGCTTGTTTaGGCTCCTCCAAGGAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: RNRPSRSKAVGSPFCPELRHWLV*APPRSS Trigger: GCTACTCCTTGGAGGAGCCCAAACAAGCCAATGGCG...CAGCTCTGGACAGAAAGGGGACCCGACTGCTTTGGACCTAGATGGCCTATTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS-3UTR TCA 90 bp | TGGGGAGGCCAGGGCTTGAAGTTTTTCACAGAAGAGGCAAGTGGGAGCCTAGTGTCATCCGGTACAGCATaGAAGCCACCAGGCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: WGGQGLKFFTEEASGSLVSSGTA*KPPGTQ Trigger: CTGTGTGCCTGGTGGCTTTCATGCTGTACCGGATGA...CACTAGGCTCCCACTTGCCTCTTCTGTGAAAAACTTCAAGCCCTGGCCTCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS-3UTR GCA 90 bp | GGTCTCCTCCCATTTGGAGAAACCAAGTCAGAAGAGTGGACGACAGGTGTGGTTCAGTCTCGGTGTTGCTaGTGGTGGGCTCTGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLLPFGETKSEEWTTGVVQSRCC*WWALEL Trigger: CAGCTCCAGAGCCCACCAGCAGCAACACCGAGACTG...AACCACACCTGTCGTCCACTCTTCTGACTTGGTTTCTCCAAATGGGAGGAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS-3UTR GCA 90 bp | CACATCCAGCCATGTGATCTGGCAACAAGCTCTGGGATGAAACACAGGGCACAGAAGCAGTCTCGGTGTTaGTGCTGGTGGGCTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HIQPCDLATSSGMKHRAQKQSRC*CWWALE Trigger: CTCCAGAGCCCACCAGCAGCAACACCGAGACTGCTT...CTGTGCCCTGTGTTTCATCCCAGAGCTTGTTGCCAGATCACATGGCTGGATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
||
| CDS-3UTR GCA 90 bp | ACCACAGCACGGCCAACCCTAGCGGTCTCTATGGGTAAGTGCTATGGCTGGTCAAGTGAAGCCAGGCTCTaGTTCTACATGGAGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: TTARPTLAVSMGKCYGWSSEARL*FYMEHR Trigger: CCTGTGCTCCATGTAGAAGCAGAGCCTGGCTTCACT...TGACCAGCCATAGCACTTACCCATAGAGACCGCTAGGGTTGGCCGTGCTGTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS-3UTR CCA 90 bp | AGTCGGGTCCCCTTTCTGTCCAGAGCTGGGTCTCCTCCCATTTGGAGAAACCAAGATGTGACAGCTGCCTaGGCTGTGGTGACTCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: SRVPFLSRAGSPPIWRNQDVTAA*AVVTLT Trigger: AGTCAGAGTCACCACAGCCCAGGCAGCTGTCACATC...TTGGTTTCTCCAAATGGGAGGAGACCCAGCTCTGGACAGAAAGGGGACCCGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| 3UTR CAA 72 bp | GGTCCCCTTTCTGTCCAGAGCTGGGTCTCCTCCCATTaGGAGAAACCAAGTCAGAAGAGTGGACGACAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GPLSVQSWVSSH*EKPSQKSGRQV Trigger: CACCTGTCGTCCACTCTTCTGACTTGGTTTCTCCAAATGGGAGGAGACCCAGCTCTGGACAGAAAGGGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS-3UTR TCA 90 bp | TGTCCTCAGGATCCTCCAGCCGCAATAGGCCATCTAGGTCCAAAGCAGTCGGGTTCCCCAGAGCCATCCTaGTCTTCAGGAGGAACATTT | + |
|
Preference number: 4 (lower is better) Translates to: CPQDPPAAIGHLGPKQSGSPEPS*SSGGTF Trigger: AAATGTTCCTCCTGAAGATCAGGATGGCTCTGGGGA...ACCCGACTGCTTTGGACCTAGATGGCCTATTGCGGCTGGAGGATCCTGAGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS-3UTR GCA 90 bp | GGCCAGGGCTTGAAGTTTTTCACAGAAGAGGCAAGTGGGAGCCTAGTGAGTGGCATGAGATGTGACAGCTaGCTGGGCTGTGGTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: GQGLKFFTEEASGSLVSGMRCDS*LGCGDS Trigger: AGAGTCACCACAGCCCAGGCAGCTGTCACATCTCAT...GCCACTCACTAGGCTCCCACTTGCCTCTTCTGTGAAAAACTTCAAGCCCTGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS-3UTR TCA 90 bp | GGTCTCCTCCCATTTGGAGAAACCAAGTCAGAAGAGTGGACGACAGGTGTGGTTCTGTCCAAAAGGCTCTaGGAAGCACCTGTGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLLPFGETKSEEWTTGVVLSKRL*EAPVAP Trigger: AGGAGCCACAGGTGCTTCTCAGAGCCTTTTGGACAG...AACCACACCTGTCGTCCACTCTTCTGACTTGGTTTCTCCAAATGGGAGGAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAAAAGACTCACTCTTTGGGAAACATTTCTGACTCCAGCCTGGGGGCGGGGAGTGAAGCCAGGCTCTaGTTCTACATGGAGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: KQKTHSLGNISDSSLGAGSEARL*FYMEHR Trigger: CCTGTGCTCCATGTAGAAGCAGAGCCTGGCTTCACT...CCCCGCCCCCAGGCTGGAGTCAGAAATGTTTCCCAAAGAGTGAGTCTTTTGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS-3UTR TCA 90 bp | CCATTTAGAAGAACAGACATCAGGGCCTGTAAAACCTTGGCTGAACTTACCAACCCCTGGGCCTGGTGGTaGCCTCCTTTTCCTTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PFRRTDIRACKTLAELTNPWAWW*PPFPCP Trigger: GGGACAAGGAAAAGGAGGTCACCACCAGGCCCAGGG...GTTGGTAAGTTCAGCCAAGGTTTTACAGGCCCTGATGTCTGTTCTTCTAAATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
||
| CDS-3UTR CCA 90 bp | GGTCTCCTCCCATTTGGAGAAACCAAGTCAGAAGAGTGGACGACAGGTGTGGTTAGAACTCCTCCTGCTTaGTGGGTTTCTGGTAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GLLPFGETKSEEWTTGVVRTPPA*WVSGRH Trigger: GTGCCTACCAGAAACCCACCAAGCAGGAGGAGTTCT...AACCACACCTGTCGTCCACTCTTCTGACTTGGTTTCTCCAAATGGGAGGAGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS-3UTR GCA 90 bp | AGTGCCAGCCATACTCAAGATGTGTCTTGTCAACTTCCGGGAGGAAGGATGACTCTGGCAAAGCACCTGTaGCAGAGCCAGAGAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SASHTQDVSCQLPGGRMTLAKHL*QSQRSC Trigger: ACAACTTCTCTGGCTCTGGCACAGGTGCTTTGCCAG...AGTCATCCTTCCTCCCGGAAGTTGACAAGACACATCTTGAGTATGGCTGGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS-3UTR CCA 90 bp | CTAGAGTCCCAATTACTTAAACCATTTAGAAGAACAGACATCAGGGCCTGTAAACGGTGTTGCTGCTGGTaGGCTCTGGAGCTGTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LESQLLKPFRRTDIRACKRCCCW*ALELWA Trigger: CGCCCACAGCTCCAGAGCCCACCAGCAGCAACACCG...TTTACAGGCCCTGATGTCTGTTCTTCTAAATGGTTTAAGTAATTGGGACTCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
||
| CDS-3UTR GCA 90 bp | CCATTTAGAAGAACAGACATCAGGGCCTGTAAAACCTTGGCTGAACTTACCAACCCTCCAAGGAGTAGCTaGCTTCGTCCTTCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PFRRTDIRACKTLAELTNPPRSS*LRPSSS Trigger: TGAAGAAGAAGGACGAAGGCAGCTACTCCTTGGAGG...GTTGGTAAGTTCAGCCAAGGTTTTACAGGCCCTGATGTCTGTTCTTCTAAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
||
| CDS-3UTR CCA 90 bp | CAAGATGTGCTAGAGTCCCAATTACTTAAACCATTTAGAAGAACAGACATCAGGACACGTCCTTCCAAGTaGAAGGTGTCTGCCGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: QDVLESQLLKPFRRTDIRTRPSK*KVSAVT Trigger: TGTCACGGCAGACACCTTCCACTTGGAAGGACGTGT...CCTGATGTCTGTTCTTCTAAATGGTTTAAGTAATTGGGACTCTAGCACATCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
||
| CDS-3UTR CCA 90 bp | CAAGATGTGCTAGAGTCCCAATTACTTAAACCATTTAGAAGAACAGACATCAGGAGAACTCCTCCTGCTTaGTGGGTTTCTGGTAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QDVLESQLLKPFRRTDIRRTPPA*WVSGRH Trigger: GTGCCTACCAGAAACCCACCAAGCAGGAGGAGTTCT...CCTGATGTCTGTTCTTCTAAATGGTTTAAGTAATTGGGACTCTAGCACATCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
||
| 3UTR CAA 72 bp | CCATTTAGAAGAACAGACATCAGGGCCTGTAAAACCTaGGCTGAACTTACCAACTTCCAAAAGAAGTTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: PFRRTDIRACKT*AELTNFQKKFS Trigger: GCTAAACTTCTTTTGGAAGTTGGTAAGTTCAGCCAAGGTTTTACAGGCCCTGATGTCTGTTCTTCTAAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
||
| CDS GCA 90 bp | GCCGCCACCCTCCACACGTGGAGGCTGATGGTCAGGTTGACCAGGTaGTGTGGGAGCCGAGGTCTCATGGAGGCCAGGTTGCATGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: AATLHTWRLMVRLTR*CGSRGLMEARLHAP Trigger: GGGGGCATGCAACCTGGCCTCCATGAGACCTCGGCTCCCACAGCACCTGGTCAACCTGACCATCAGCCTCCACGTGTGGAGGGTGGCGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020911.14 ENSMUST00000161883.2 ENSMUST00000171158.8 |
||
| CDS CCA 90 bp | GTGACAGCTGCCTGGGCTGTGGTGACTCTGACTGTTGAGGCCCGTTaGGTGATGGGGAGCTGCACGGTCTCCCTGGGCCTGGTGGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: VTAAWAVVTLTVEAR*VMGSCTVSLGLVVT Trigger: GGTCACCACCAGGCCCAGGGAGACCGTGCAGCTCCCCATCACCCAACGGGCCTCAACAGTCAGAGTCACCACAGCCCAGGCAGCTGTCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020911.14 ENSMUST00000161883.2 ENSMUST00000171158.8 |
||
| CDS CCA 90 bp | CACCCTCCACACGTGGAGGCTGATGGTCAGGTTGACCAGGTGCTGTaGGAGCCGAGGTCTCATGGAGGCCAGGTTGCATGCCCCCGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: HPPHVEADGQVDQVL*EPRSHGGQVACPRA Trigger: CGCACGGGGGCATGCAACCTGGCCTCCATGAGACCTCGGCTCCCACAGCACCTGGTCAACCTGACCATCAGCCTCCACGTGTGGAGGGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020911.14 ENSMUST00000161883.2 ENSMUST00000171158.8 |
||
| CDS TCA 90 bp | CGGATGAGATGTGACAGCTGCCTGGGCTGTGGTGACTCTGACTGTTaGGGCCCGTTGGGTGATGGGGAGCTGCACGGTCTCCCTGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RMRCDSCLGCGDSDC*GPLGDGELHGLPGP Trigger: AGGCCCAGGGAGACCGTGCAGCTCCCCATCACCCAACGGGCCTCAACAGTCAGAGTCACCACAGCCCAGGCAGCTGTCACATCTCATCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020911.14 ENSMUST00000161883.2 ENSMUST00000171158.8 |
||
| CDS TCA 90 bp | GGAGCCGAGGTCTCATGGAGGCCAGGTTGCATGCCCCCGTGCGGATaGGATGTGACAGCTGCCTGGGCTGTGGTGACTCTGACTGTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GAEVSWRPGCMPPCG*DVTAAWAVVTLTVE Trigger: CTCAACAGTCAGAGTCACCACAGCCCAGGCAGCTGTCACATCTCATCCGCACGGGGGCATGCAACCTGGCCTCCATGAGACCTCGGCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020911.14 ENSMUST00000161883.2 ENSMUST00000171158.8 |
||
| CDS GCA 90 bp | GCTGTGGTGACTCTGACTGTTGAGGCCCGTTGGGTGATGGGGAGCTaGACGGTCTCCCTGGGCCTGGTGGTGACCTCCTTTTCCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AVVTLTVEARWVMGS*TVSLGLVVTSFSLS Trigger: GGACAAGGAAAAGGAGGTCACCACCAGGCCCAGGGAGACCGTGCAGCTCCCCATCACCCAACGGGCCTCAACAGTCAGAGTCACCACAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020911.14 ENSMUST00000161883.2 ENSMUST00000171158.8 |
||
| CDS CCA 90 bp | AAGCAGTCTCGGTGTTGCTGCTGGTGGGCTCTGGAGCTGTGGGCGTaGCTGTCAACAGCCACACGTCCTTCCAAGTGGAAGGTGTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KQSRCCCWWALELWA*LSTATRPSKWKVSA Trigger: GGCAGACACCTTCCACTTGGAAGGACGTGTGGCTGTTGACAGCCACGCCCACAGCTCCAGAGCCCACCAGCAGCAACACCGAGACTGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020911.14 ENSMUST00000161883.2 ENSMUST00000171158.8 |
||
| CDS CCA 90 bp | TCCTTTTCCTTGTCCCGAGCAGTGAAGCCAGGCTCTGCTTCTACATaGAGCACAGGCTCTCCCTCCTCGGGCTTCTCTCCGGCTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SFSLSRAVKPGSAST*STGSPSSGFSPAGR Trigger: CCTGCCAGCCGGAGAGAAGCCCGAGGAGGGAGAGCCTGTGCTCCATGTAGAAGCAGAGCCTGGCTTCACTGCTCGGGACAAGGAAAAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020911.14 ENSMUST00000161883.2 ENSMUST00000171158.8 |
||
| CDS GCA 90 bp | GGTGGTGACCTCCTTTTCCTTGTCCCGAGCAGTGAAGCCAGGCTCTaGTTCTACATGGAGCACAGGCTCTCCCTCCTCGGGCTTCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GGDLLFLVPSSEARL*FYMEHRLSLLGLLS Trigger: GGAGAGAAGCCCGAGGAGGGAGAGCCTGTGCTCCATGTAGAAGCAGAGCCTGGCTTCACTGCTCGGGACAAGGAAAAGGAGGTCACCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020911.14 ENSMUST00000161883.2 ENSMUST00000171158.8 |
||
| CDS CCA 90 bp | CTCGACAACCTCTTTGATGACAGAAGTGCCGCCACCCTCCACACGTaGAGGCTGATGGTCAGGTTGACCAGGTGCTGTGGGAGCCGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LDNLFDDRSAATLHT*RLMVRLTRCCGSRG Trigger: ACCTCGGCTCCCACAGCACCTGGTCAACCTGACCATCAGCCTCCACGTGTGGAGGGTGGCGGCACTTCTGTCATCAAAGAGGTTGTCGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020911.14 ENSMUST00000161883.2 ENSMUST00000171158.8 |
||
| CDS-3UTR CAA 90 bp | AAAGGAGGGGAATCAGTTCCCAGCACACCCTGGGACCGCTCGGGCAGGAACAGCGTGACCTCCTTTTCCTaGTCCCGAGCAGTGAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KGGESVPSTPWDRSGRNSVTSFS*SRAVKP Trigger: TGGCTTCACTGCTCGGGACAAGGAAAAGGAGGTCAC...GCTGTTCCTGCCCGAGCGGTCCCAGGGTGTGCTGGGAACTGATTCCCCTCCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS CCA 90 bp | CAGGACAGAGGTAAAAGCAGTCTCGGTGTTGCTGCTGGTGGGCTCTaGAGCTGTGGGCGTGGCTGTCAACAGCCACACGTCCTTCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: QDRGKSSLGVAAGGL*SCGRGCQQPHVLPS Trigger: ACTTGGAAGGACGTGTGGCTGTTGACAGCCACGCCCACAGCTCCAGAGCCCACCAGCAGCAACACCGAGACTGCTTTTACCTCTGTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020911.14 ENSMUST00000161883.2 ENSMUST00000171158.8 |
||
| CDS GCA 90 bp | GGCGTGGCTGTCAACAGCCACACGTCCTTCCAAGTGGAAGGTGTCTaGCGTGACAAAGTATCTGGCAAAGCACCTGTGCCAGAGCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GVAVNSHTSFQVEGV*RDKVSGKAPVPEPE Trigger: CTCTGGCTCTGGCACAGGTGCTTTGCCAGATACTTTGTCACGGCAGACACCTTCCACTTGGAAGGACGTGTGGCTGTTGACAGCCACGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020911.14 ENSMUST00000161883.2 ENSMUST00000171158.8 |
||
| CDS CCA 90 bp | CTGGAGCTGTGGGCGTGGCTGTCAACAGCCACACGTCCTTCCAAGTaGAAGGTGTCTGCCGTGACAAAGTATCTGGCAAAGCACCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LELWAWLSTATRPSK*KVSAVTKYLAKHLC Trigger: GCACAGGTGCTTTGCCAGATACTTTGTCACGGCAGACACCTTCCACTTGGAAGGACGTGTGGCTGTTGACAGCCACGCCCACAGCTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020911.14 ENSMUST00000161883.2 ENSMUST00000171158.8 |
||
| CDS-3UTR CAA 90 bp | GGCCAGGGCTTGAAGTTTTTCACAGAAGAGGCAAGTGGGAGCCTAGTGAGTGGCGGCACCGCCATTGGCTaGTTTGGGCTCCTCCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GQGLKFFTEEASGSLVSGGTAIG*FGLLQG Trigger: TCCTTGGAGGAGCCCAAACAAGCCAATGGCGGTGCC...GCCACTCACTAGGCTCCCACTTGCCTCTTCTGTGAAAAACTTCAAGCCCTGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS-3UTR CAA 90 bp | AGGCTTGGACACTGTCCCACAAGCCCTCAGCTGAGGGCTGTCTCAGATATGACCGTGACCTCCTTTTCCTaGTCCCGAGCAGTGAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RLGHCPTSPQLRAVSDMTVTSFS*SRAVKP Trigger: TGGCTTCACTGCTCGGGACAAGGAAAAGGAGGTCAC...GGTCATATCTGAGACAGCCCTCAGCTGAGGGCTTGTGGGACAGTGTCCAAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
||
| CDS-3UTR CAA 90 bp | AAGCAAAAGACTCACTCTTTGGGAAACATTTCTGACTCCAGCCTGGGGGCGGGGGGCACCGCCATTGGCTaGTTTGGGCTCCTCCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: KQKTHSLGNISDSSLGAGGTAIG*FGLLQG Trigger: TCCTTGGAGGAGCCCAAACAAGCCAATGGCGGTGCC...CCCCGCCCCCAGGCTGGAGTCAGAAATGTTTCCCAAAGAGTGAGTCTTTTGCTT 57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS TCA 90 bp | GGCTGTCAACAGCCACACGTCCTTCCAAGTGGAAGGTGTCTGCCGTaGCAAAGTATCTGGCAAAGCACCTGTGCCAGAGCCAGAGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GCQQPHVLPSGRCLP*QSIWQSTCARAREV Trigger: AACTTCTCTGGCTCTGGCACAGGTGCTTTGCCAGATACTTTGTCACGGCAGACACCTTCCACTTGGAAGGACGTGTGGCTGTTGACAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020911.14 ENSMUST00000161883.2 ENSMUST00000171158.8 |
||
| CDS-3UTR CAA 90 bp | TGTAGATTAGGGAAGCGAGGTGAGGGACACCAGTCAACAGACTTGCCTTACCCCCCAGAGCCAGAGAAGTaGTCAGAGTCATCCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CRLGKRGEGHQSTDLPYPPEPEK*SESSPE Trigger: CTCTGGGGATGACTCTGACAACTTCTCTGGCTCTGG...GGGGTAAGGCAAGTCTGTTGACTGGTGTCCCTCACCTCGCTTCCCTAATCTACA 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS-3UTR CAA 90 bp | GTCCAGAGCTGGGTCTCCTCCCATTTGGAGAAACCAAGTCAGAAGAGTGGACGACCAGAGCCAGAGAAGTaGTCAGAGTCATCCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VQSWVSSHLEKPSQKSGRPEPEK*SESSPE Trigger: CTCTGGGGATGACTCTGACAACTTCTCTGGCTCTGG...TCGTCCACTCTTCTGACTTGGTTTCTCCAAATGGGAGGAGACCCAGCTCTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS TCA 90 bp | GTGCCAGAGCCAGAGAAGTTGTCAGAGTCATCCCCAGAGCCATCCTaGTCTTCAGGAGGAACATTTACAGCCACAATTTGCGGGAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VPEPEKLSESSPEPS*SSGGTFTATICGRA Trigger: TGCCCTCCCGCAAATTGTGGCTGTAAATGTTCCTCCTGAAGATCAGGATGGCTCTGGGGATGACTCTGACAACTTCTCTGGCTCTGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS-3UTR CAA 90 bp | TCCTGGACTAGCCAGCCTACTTACGGGCCGCCAAAAATGGGGCACCATACAGATTTCAAAGGTGAAGTCTaGTTCTCCAGAGCCCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SWTSQPTYGPPKMGHHTDFKGEV*FSRALS Trigger: GGAGAGGGCTCTGGAGAACAAGACTTCACCTTTGAA...ATCTGTATGGTGCCCCATTTTTGGCGGCCCGTAAGTAGGCTGGCTAGTCCAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020911.14 |
||
| CDS TCA 90 bp | TCAAAGGTGAAGTCTTGTTCTCCAGAGCCCTCTCCTGCGGGAAGCTaGTTGGCAGTTCCATCCTCGACAACCTCTTTGATGACAGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SKVKSCSPEPSPAGS*LAVPSSTTSLMTEV Trigger: CACTTCTGTCATCAAAGAGGTTGTCGAGGATGGAACTGCCAATCAGCTTCCCGCAGGAGAGGGCTCTGGAGAACAAGACTTCACCTTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS TCA 90 bp | GTGCCAGAGCCAGAGAAGTTGTCAGAGTCATCCCCAGAGCCATCCTaGTCTTCAGGAGGAACATTTACAGCCACAATTTGCATCCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VPEPEKLSESSPEPS*SSGGTFTATICIPG Trigger: TCCTGGGATGCAAATTGTGGCTGTAAATGTTCCTCCTGAAGATCAGGATGGCTCTGGGGATGACTCTGACAACTTCTCTGGCTCTGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161883.2 |
||
| CDS CCA 72 bp | GCCTGGGCTGTGGTGACTCTGACTGTTGAGGCCCGTTaGGTGATGGGGAGCTGCACGGTCTCCCTGGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: AWAVVTLTVEAR*VMGSCTVSLGL Trigger: CAGGCCCAGGGAGACCGTGCAGCTCCCCATCACCCAACGGGCCTCAACAGTCAGAGTCACCACAGCCCAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020911.14 ENSMUST00000161883.2 ENSMUST00000171158.8 |
||
| CDS GCA 72 bp | GGAACATTTACAGCCACAATTTGCGGGAGGGCAGGCTaGAGGCGCAGCGCCAGCGCGCAGAGCCAGAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GTFTATICGRAG*RRSASAQSQSQ Trigger: CTGGCTCTGGCTCTGCGCGCTGGCGCTGCGCCTGCAGCCTGCCCTCCCGCAAATTGTGGCTGTAAATGTTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS CAA 72 bp | GCCGCCACCCTCCACACGTGGAGGCTGATGGTCAGGTaGACCAGGTGCTGTGGGAGCCGAGGTCTCATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: AATLHTWRLMVR*TRCCGSRGLME Trigger: CTCCATGAGACCTCGGCTCCCACAGCACCTGGTCAACCTGACCATCAGCCTCCACGTGTGGAGGGTGGCGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020911.14 ENSMUST00000161883.2 ENSMUST00000171158.8 |
||
| CDS CAA 72 bp | AGGTGCTGTGGGAGCCGAGGTCTCATGGAGGCCAGGTaGCATGCCCCCGTGCGGATGAGATGTGACAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RCCGSRGLMEAR*HAPVRMRCDSC Trigger: GCAGCTGTCACATCTCATCCGCACGGGGGCATGCAACCTGGCCTCCATGAGACCTCGGCTCCCACAGCACCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020911.14 ENSMUST00000161883.2 ENSMUST00000171158.8 |
||
| CDS CAA 90 bp | AGGTTGACCAGGTGCTGTGGGAGCCGAGGTCTCATGGAGGCCAGGTaGCATGCCCCCGTGCGGATGAGATGTGACAGCTGCCTGGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RLTRCCGSRGLMEAR*HAPVRMRCDSCLGC Trigger: ACAGCCCAGGCAGCTGTCACATCTCATCCGCACGGGGGCATGCAACCTGGCCTCCATGAGACCTCGGCTCCCACAGCACCTGGTCAACCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020911.14 ENSMUST00000161883.2 ENSMUST00000171158.8 |
||
| CDS CAA 90 bp | GACAGAAGTGCCGCCACCCTCCACACGTGGAGGCTGATGGTCAGGTaGACCAGGTGCTGTGGGAGCCGAGGTCTCATGGAGGCCAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: DRSAATLHTWRLMVR*TRCCGSRGLMEARL Trigger: CAACCTGGCCTCCATGAGACCTCGGCTCCCACAGCACCTGGTCAACCTGACCATCAGCCTCCACGTGTGGAGGGTGGCGGCACTTCTGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020911.14 ENSMUST00000161883.2 ENSMUST00000171158.8 |
||
| CDS CAA 90 bp | CCCAGAGCCATCCTGATCTTCAGGAGGAACATTTACAGCCACAATTaGCGGGAGGGCAGGCTGCAGGCGCAGCGCCAGCGCGCAGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PRAILIFRRNIYSHN*REGRLQAQRQRAEP Trigger: TGGCTCTGCGCGCTGGCGCTGCGCCTGCAGCCTGCCCTCCCGCAAATTGTGGCTGTAAATGTTCCTCCTGAAGATCAGGATGGCTCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
||
| CDS TCA 72 bp | GTCTCATGGAGGCCAGGTTGCATGCCCCCGTGCGGATaGGATGTGACAGCTGCCTGGGCTGTGGTGACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VSWRPGCMPPCG*DVTAAWAVVTL Trigger: CAGAGTCACCACAGCCCAGGCAGCTGTCACATCTCATCCGCACGGGGGCATGCAACCTGGCCTCCATGAGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020911.14 ENSMUST00000161883.2 ENSMUST00000171158.8 |
||
| CDS GCA 72 bp | CTCCACACGTGGAGGCTGATGGTCAGGTTGACCAGGTaGTGTGGGAGCCGAGGTCTCATGGAGGCCAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LHTWRLMVRLTR*CGSRGLMEARL Trigger: CAACCTGGCCTCCATGAGACCTCGGCTCCCACAGCACCTGGTCAACCTGACCATCAGCCTCCACGTGTGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020911.14 ENSMUST00000161883.2 ENSMUST00000171158.8 |
||
| CDS CCA 72 bp | CGGTGTTGCTGCTGGTGGGCTCTGGAGCTGTGGGCGTaGCTGTCAACAGCCACACGTCCTTCCAAGTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RCCCWWALELWA*LSTATRPSKWK Trigger: CTTCCACTTGGAAGGACGTGTGGCTGTTGACAGCCACGCCCACAGCTCCAGAGCCCACCAGCAGCAACACCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020911.14 ENSMUST00000161883.2 ENSMUST00000171158.8 |
||
| CDS CCA 72 bp | CAGTCTCGGTGTTGCTGCTGGTGGGCTCTGGAGCTGTaGGCGTGGCTGTCAACAGCCACACGTCCTTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: QSRCCCWWALEL*AWLSTATRPSK Trigger: CTTGGAAGGACGTGTGGCTGTTGACAGCCACGCCCACAGCTCCAGAGCCCACCAGCAGCAACACCGAGACTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020911.14 ENSMUST00000161883.2 ENSMUST00000171158.8 |
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| CDS CAA 90 bp | GGGAGCTGCACGGTCTCCCTGGGCCTGGTGGTGACCTCCTTTTCCTaGTCCCGAGCAGTGAAGCCAGGCTCTGCTTCTACATGGAGCACA | + |
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Preference number: 6 (lower is better) Translates to: GSCTVSLGLVVTSFS*SRAVKPGSASTWST Trigger: TGTGCTCCATGTAGAAGCAGAGCCTGGCTTCACTGCTCGGGACAAGGAAAAGGAGGTCACCACCAGGCCCAGGGAGACCGTGCAGCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020911.14 ENSMUST00000161883.2 ENSMUST00000171158.8 |
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| CDS CCA 72 bp | GAGCACAGGCTCTCCCTCCTCGGGCTTCTCTCCGGCTaGCAGGACAGAGGTAAAAGCAGTCTCGGTGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: EHRLSLLGLLSG*QDRGKSSLGVA Trigger: AGCAACACCGAGACTGCTTTTACCTCTGTCCTGCCAGCCGGAGAGAAGCCCGAGGAGGGAGAGCCTGTGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020911.14 ENSMUST00000161883.2 ENSMUST00000171158.8 |
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| CDS CCA 72 bp | TTGTCCCGAGCAGTGAAGCCAGGCTCTGCTTCTACATaGAGCACAGGCTCTCCCTCCTCGGGCTTCTCTCCG | + |
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Preference number: 6 (lower is better) Translates to: LSRAVKPGSAST*STGSPSSGFSP Trigger: CGGAGAGAAGCCCGAGGAGGGAGAGCCTGTGCTCCATGTAGAAGCAGAGCCTGGCTTCACTGCTCGGGACAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020911.14 ENSMUST00000161883.2 ENSMUST00000171158.8 |
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| CDS CCA 72 bp | CTTCCTTCCTGTCCAAAAGGCTCTGAGAAGCACCTGTaGCTCCTTCGTCCACCGGGGGCTGATTCCGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: LPSCPKGSEKHL*LLRPPGADSAG Trigger: GCCTGCGGAATCAGCCCCCGGTGGACGAAGGAGCCACAGGTGCTTCTCAGAGCCTTTTGGACAGGAAGGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
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| CDS CAA 72 bp | ATCCTGATCTTCAGGAGGAACATTTACAGCCACAATTaGCGGGAGGGCAGGCTGCAGGCGCAGCGCCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: ILIFRRNIYSHN*REGRLQAQRQR Trigger: GCGCTGGCGCTGCGCCTGCAGCCTGCCCTCCCGCAAATTGTGGCTGTAAATGTTCCTCCTGAAGATCAGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
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| CDS CAA 90 bp | CCCAGAGCCATCCTGATCTTCAGGAGGAACATTTACAGCCACAATTaGCATCCCAGGATCCGCCAGGCAGCGCGGGAAGAAGTCCCCGCT | + |
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Preference number: 6 (lower is better) Translates to: PRAILIFRRNIYSHN*HPRIRQAAREEVPA Trigger: AGCGGGGACTTCTTCCCGCGCTGCCTGGCGGATCCTGGGATGCAAATTGTGGCTGTAAATGTTCCTCCTGAAGATCAGGATGGCTCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161883.2 |
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| CDS TCA 72 bp | CAGCCACACGTCCTTCCAAGTGGAAGGTGTCTGCCGTaGCAAAGTATCTGGCAAAGCACCTGTGCCAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: QPHVLPSGRCLP*QSIWQSTCARA Trigger: GGCTCTGGCACAGGTGCTTTGCCAGATACTTTGTCACGGCAGACACCTTCCACTTGGAAGGACGTGTGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020911.14 ENSMUST00000161883.2 ENSMUST00000171158.8 |
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| CDS CCA 72 bp | TGGTGGGTTTCTGGTAGGCACCGCCATTGGCTTGTTTaGGCTCCTCCAAGGAGTAGCTGCCTTCGTCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: WWVSGRHRHWLV*APPRSSCLRPS Trigger: AGAAGGACGAAGGCAGCTACTCCTTGGAGGAGCCCAAACAAGCCAATGGCGGTGCCTACCAGAAACCCACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
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| CDS CCA 72 bp | TGGGCGTGGCTGTCAACAGCCACACGTCCTTCCAAGTaGAAGGTGTCTGCCGTGACAAAGTATCTGGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: WAWLSTATRPSK*KVSAVTKYLAK Trigger: CTTTGCCAGATACTTTGTCACGGCAGACACCTTCCACTTGGAAGGACGTGTGGCTGTTGACAGCCACGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020911.14 ENSMUST00000161883.2 ENSMUST00000171158.8 |
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| CDS GCA 72 bp | TTCAAAGGTGAAGTCTTGTTCTCCAGAGCCCTCTCCTaGGGGAAGCTGATTGGCAGTTCCATCCTCGACAAC | + |
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Preference number: 6 (lower is better) Translates to: FKGEVLFSRALS*GKLIGSSILDN Trigger: GTTGTCGAGGATGGAACTGCCAATCAGCTTCCCGCAGGAGAGGGCTCTGGAGAACAAGACTTCACCTTTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020911.14 ENSMUST00000171158.8 |
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| CDS CAA 72 bp | ATCCTGATCTTCAGGAGGAACATTTACAGCCACAATTaGCATCCCAGGATCCGCCAGGCAGCGCGGGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: ILIFRRNIYSHN*HPRIRQAAREE Trigger: TTCTTCCCGCGCTGCCTGGCGGATCCTGGGATGCAAATTGTGGCTGTAAATGTTCCTCCTGAAGATCAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161883.2 |
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