Pregenerated sensors for SDAD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029415Ensembl transcript IDs: ENSMUST00000031364.5, ENSMUST00000201143.2
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAGTCCCAGGGGCTGGGAGCTCCAGCTGCTTTCAGAGCTCCGGCTaGTCAGAGCTGGTTCCTGAGCACACACCCGTGAGGAACACAGGA | + |
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Preference number: 1 (lower is better) Translates to: EVPGAGSSSCFQSSG*SELVPEHTPVRNTG Trigger: TCCTGTGTTCCTCACGGGTGTGTGCTCAGGAACCAGCTCTGAGCAGCCGGAGCTCTGAAAGCAGCTGGAGCTCCCAGCCCCTGGGACTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR TCA 90 bp | GAGCTCCAGCTGCTTTCAGAGCTCCGGCTGCTCAGAGCTGGTTCCTaGGCACACACCCGTGAGGAACACAGGAAGAAGGCCAAGGGACGG | + |
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Preference number: 1 (lower is better) Translates to: ELQLLSELRLLRAGS*AHTREEHRKKAKGR Trigger: CCGTCCCTTGGCCTTCTTCCTGTGTTCCTCACGGGTGTGTGCTCAGGAACCAGCTCTGAGCAGCCGGAGCTCTGAAAGCAGCTGGAGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR TCA 90 bp | CCTCCACAGCAGTGCTGGGTGAGGCTGACGGGCAGTCCCCTACAGTaGCCTGGGCACCGTTGGGGAAAGCAAGGGACAAATAAACCCAAG | + |
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Preference number: 1 (lower is better) Translates to: PPQQCWVRLTGSPLQ*PGHRWGKQGTNKPK Trigger: CTTGGGTTTATTTGTCCCTTGCTTTCCCCAACGGTGCCCAGGTCACTGTAGGGGACTGCCCGTCAGCCTCACCCAGCACTGCTGTGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR GCA 90 bp | TCCCTGGGTATGACCCAGCAGCCTAGAACTGGCCTTGGTACTGTGTaGCTGAAGTCCCAGGGGCTGGGAGCTCCAGCTGCTTTCAGAGCT | + |
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Preference number: 1 (lower is better) Translates to: SLGMTQQPRTGLGTV*LKSQGLGAPAAFRA Trigger: AGCTCTGAAAGCAGCTGGAGCTCCCAGCCCCTGGGACTTCAGGCACACAGTACCAAGGCCAGTTCTAGGCTGCTGGGTCATACCCAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR TCA 90 bp | TTCAGAGCTCCGGCTGCTCAGAGCTGGTTCCTGAGCACACACCCGTaGGGAACACAGGAAGAAGGCCAAGGGACGGCTTCAGGTCTCACA | + |
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Preference number: 1 (lower is better) Translates to: FRAPAAQSWFLSTHP*GTQEEGQGTASGLT Trigger: TGTGAGACCTGAAGCCGTCCCTTGGCCTTCTTCCTGTGTTCCTCACGGGTGTGTGCTCAGGAACCAGCTCTGAGCAGCCGGAGCTCTGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR GCA 90 bp | ACTGCTTCTAAAGCCAGCAGCCTGCATGCAGACTGGGTCCTGCAATaGATTCACGTGTGGCAACAGCAGCACACACCGCGGTACACACCC | + |
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Preference number: 1 (lower is better) Translates to: TASKASSLHADWVLQ*IHVWQQQHTPRYTP Trigger: GGGTGTGTACCGCGGTGTGTGCTGCTGTTGCCACACGTGAATGCATTGCAGGACCCAGTCTGCATGCAGGCTGCTGGCTTTAGAAGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR TCA 90 bp | TGGGTGAGAAGCAGAGACGACAGGAAAGGCTTAATCCCGGAGCTCTaGCCTGACCCAGAGTTCCAGCTGCTGCAAGCTTTCTTCTTTTGG | + |
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Preference number: 1 (lower is better) Translates to: WVRSRDDRKGLIPEL*PDPEFQLLQAFFFW Trigger: CCAAAAGAAGAAAGCTTGCAGCAGCTGGAACTCTGGGTCAGGTCAGAGCTCCGGGATTAAGCCTTTCCTGTCGTCTCTGCTTCTCACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR CCA 90 bp | GTGGCTGAAGCTGCTGTGCTCTCCGCTTTCCTTTGTATCTTCACATaGGTGAGAAGCAGAGACGACAGGAAAGGCTTAATCCCGGAGCTC | + |
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Preference number: 1 (lower is better) Translates to: VAEAAVLSAFLCIFT*VRSRDDRKGLIPEL Trigger: GAGCTCCGGGATTAAGCCTTTCCTGTCGTCTCTGCTTCTCACCCATGTGAAGATACAAAGGAAAGCGGAGAGCACAGCAGCTTCAGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR CCA 90 bp | CGAGAGCGTCCTGTGAACTTTGCTAATGCCATGCATGTGGCATGCTaGCATTCTGGATTTCTATGCCAATCCCTGGGTATGACCCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: RERPVNFANAMHVAC*HSGFLCQSLGMTQQ Trigger: CTGCTGGGTCATACCCAGGGATTGGCATAGAAATCCAGAATGCCAGCATGCCACATGCATGGCATTAGCAAAGTTCACAGGACGCTCTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR GCA 90 bp | TTTGCTAATGCCATGCATGTGGCATGCTGGCATTCTGGATTTCTATaGCAATCCCTGGGTATGACCCAGCAGCCTAGAACTGGCCTTGGT | + |
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Preference number: 1 (lower is better) Translates to: FANAMHVACWHSGFL*QSLGMTQQPRTGLG Trigger: ACCAAGGCCAGTTCTAGGCTGCTGGGTCATACCCAGGGATTGGCATAGAAATCCAGAATGCCAGCATGCCACATGCATGGCATTAGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR TCA 90 bp | CACAGACAGCCTTATAGGAAGAGGAGTTGTGCTGTTGACTGTGGCTaGAGCTGCTGTGCTCTCCGCTTTCCTTTGTATCTTCACATGGGT | + |
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Preference number: 1 (lower is better) Translates to: HRQPYRKRSCAVDCG*SCCALRFPLYLHMG Trigger: ACCCATGTGAAGATACAAAGGAAAGCGGAGAGCACAGCAGCTTCAGCCACAGTCAACAGCACAACTCCTCTTCCTATAAGGCTGTCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR CCA 90 bp | CTTACTATAAACACCGTATGTACATCTGCCCTCAGTCAAGGGCTCTaGCTCATTCAGCTACATAGGCAGCAGCAATCAGTAGGTACTCAG | + |
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Preference number: 1 (lower is better) Translates to: LTINTVCTSALSQGL*LIQLHRQQQSVGTQ Trigger: CTGAGTACCTACTGATTGCTGCTGCCTATGTAGCTGAATGAGCCAGAGCCCTTGACTGAGGGCAGATGTACATACGGTGTTTATAGTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR CCA 90 bp | CGAGAAATACACTCCAAACCATGTAAGGAACGAGAGGGTACTATTTaGGAGAAAACATCATCTAGAGAGAGTTTAAAAATATGTCACCTA | + |
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Preference number: 1 (lower is better) Translates to: REIHSKPCKEREGTI*EKTSSRESLKICHL Trigger: TAGGTGACATATTTTTAAACTCTCTCTAGATGATGTTTTCTCCCAAATAGTACCCTCTCGTTCCTTACATGGTTTGGAGTGTATTTCTCG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR-3UTR GCA 90 bp | TCCACAGCAGTGCTGGGTGAGGCTGACGGGCAGTCCCCTACAGTGACCTGGGCAGCAACCAGCAGCAGTTaGTCTCCAGCCCAGGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: STAVLGEADGQSPTVTWAATSSS*SPAQGQ Trigger: CTGCCCCTGGGCTGGAGAGCAACTGCTGCTGGTTGC...TGCCCAGGTCACTGTAGGGGACTGCCCGTCAGCCTCACCCAGCACTGCTGTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR-3UTR TCA 90 bp | AAGTCGACCTCAGAAGCTGAACAGAGCCATCGATGGAGAGGAAGGCAACCAGCAAGAACCTGCTCAGGGTaGGCAAGAGGGCCCAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: KSTSEAEQSHRWRGRQPARTCSG*ARGPRA Trigger: AGCCCTGGGCCCTCTTGCTCACCCTGAGCAGGTTCT...TGCTGGTTGCCTTCCTCTCCATCGATGGCTCTGTTCAGCTTCTGAGGTCGACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR-3UTR TCA 90 bp | ACAGATAGGCACCAGAAACTTCCTCCACAGCAGTGCTGGGTGAGGCTGACGGGCGCTCAACTGTCTACCTaGATCTGTACAGCAGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: TDRHQKLPPQQCWVRLTGAQLST*ICTAGA Trigger: GGCTCCTGCTGTACAGATTCAGGTAGACAGTTGAGC...GCCCGTCAGCCTCACCCAGCACTGCTGTGGAGGAAGTTTCTGGTGCCTATCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR-3UTR GCA 90 bp | CACACCCGTGAGGAACACAGGAAGAAGGCCAAGGGACGGCTTCAGGTCTCACACGACTGGGTCCTGCAATaGATTCACGTGTGGCAACAG | + |
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Preference number: 2 (lower is better) Translates to: HTREEHRKKAKGRLQVSHDWVLQ*IHVWQQ Trigger: CTGTTGCCACACGTGAATGCATTGCAGGACCCAGTC...GTGTGAGACCTGAAGCCGTCCCTTGGCCTTCTTCCTGTGTTCCTCACGGGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR-3UTR CCA 90 bp | CACACCCGTGAGGAACACAGGAAGAAGGCCAAGGGACGGCTTCAGGTCTCACACCTCAGTCAAGGGCTCTaGCTCATTCAGCTACATAGG | + |
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Preference number: 2 (lower is better) Translates to: HTREEHRKKAKGRLQVSHLSQGL*LIQLHR Trigger: CCTATGTAGCTGAATGAGCCAGAGCCCTTGACTGAG...GTGTGAGACCTGAAGCCGTCCCTTGGCCTTCTTCCTGTGTTCCTCACGGGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR-3UTR CCA 90 bp | GAGCGTCCTGTGAACTTTGCTAATGCCATGCATGTGGCATGCTGGCATTCTGGAGTAGGCACTCAGGGGTaGGGTGAAGCCCAGGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: ERPVNFANAMHVACWHSGVGTQG*GEAQGE Trigger: TTCTCCCTGGGCTTCACCCCACCCCTGAGTGCCTAC...TCCAGAATGCCAGCATGCCACATGCATGGCATTAGCAAAGTTCACAGGACGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR-3UTR CCA 90 bp | TGTATCTTCACATGGGTGAGAAGCAGAGACGACAGGAAAGGCTTAATCCCGGAGCCGGCTGCTCAGAGCTaGTTCCTGAGCACACACCCG | + |
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Preference number: 2 (lower is better) Translates to: CIFTWVRSRDDRKGLIPEPAAQS*FLSTHP Trigger: CGGGTGTGTGCTCAGGAACCAGCTCTGAGCAGCCGG...CTCCGGGATTAAGCCTTTCCTGTCGTCTCTGCTTCTCACCCATGTGAAGATACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR-3UTR TCA 90 bp | CTGTTGACTGTGGCTGAAGCTGCTGTGCTCTCCGCTTTCCTTTGTATCTTCACAAGTCCAGGAGCCCAGTaGCCCCAGGAAGACGGACTA | + |
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Preference number: 2 (lower is better) Translates to: LLTVAEAAVLSAFLCIFTSPGAQ*PQEDGL Trigger: TAGTCCGTCTTCCTGGGGTCACTGGGCTCCTGGACT...TGTGAAGATACAAAGGAAAGCGGAGAGCACAGCAGCTTCAGCCACAGTCAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR-3UTR TCA 90 bp | CAGAGTTCCAGCTGCTGCAAGCTTTCTTCTTTTGGTCAAGCTCTCTCTACTCTTGGCAGTCCCCTACAGTaGCCTGGGCACCGTTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: QSSSCCKLSSFGQALSTLGSPLQ*PGHRWG Trigger: TCCCCAACGGTGCCCAGGTCACTGTAGGGGACTGCC...AAGAGTAGAGAGAGCTTGACCAAAAGAAGAAAGCTTGCAGCAGCTGGAACTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR-3UTR GCA 90 bp | CTGTTGACTGTGGCTGAAGCTGCTGTGCTCTCCGCTTTCCTTTGTATCTTCACACTAAAGCCAGCAGCCTaGATGCAGACTGGGTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: LLTVAEAAVLSAFLCIFTLKPAA*MQTGSC Trigger: GCAGGACCCAGTCTGCATGCAGGCTGCTGGCTTTAG...TGTGAAGATACAAAGGAAAGCGGAGAGCACAGCAGCTTCAGCCACAGTCAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR-3UTR TCA 90 bp | AAGTCGACCTCAGAAGCTGAACAGAGCCATCGATGGAGAGGAAGGCAACCAGCAACTGATCAAACCATGTaGAGAGTAGGCACTCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: KSTSEAEQSHRWRGRQPATDQTM*RVGTQG Trigger: CCCCTGAGTGCCTACTCTTCACATGGTTTGATCAGT...TGCTGGTTGCCTTCCTCTCCATCGATGGCTCTGTTCAGCTTCTGAGGTCGACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR-3UTR CCA 90 bp | GAGCGTCCTGTGAACTTTGCTAATGCCATGCATGTGGCATGCTGGCATTCTGGAGAACAGAGCCATCGATaGAGAGGAAGGCAACCAGCA | + |
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Preference number: 2 (lower is better) Translates to: ERPVNFANAMHVACWHSGEQSHR*RGRQPA Trigger: TGCTGGTTGCCTTCCTCTCCATCGATGGCTCTGTTC...TCCAGAATGCCAGCATGCCACATGCATGGCATTAGCAAAGTTCACAGGACGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR-3UTR TCA 90 bp | CAGAGTTCCAGCTGCTGCAAGCTTTCTTCTTTTGGTCAAGCTCTCTCTACTCTTCTCAGAGCTGGTTCCTaGGCACACACCCGTGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: QSSSCCKLSSFGQALSTLLRAGS*AHTREE Trigger: TTCCTCACGGGTGTGTGCTCAGGAACCAGCTCTGAG...AAGAGTAGAGAGAGCTTGACCAAAAGAAGAAAGCTTGCAGCAGCTGGAACTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR-3UTR GCA 90 bp | CAGAGTTCCAGCTGCTGCAAGCTTTCTTCTTTTGGTCAAGCTCTCTCTACTCTTAGCCAGCAGCCTGCATaGAGACTGGGTCCTGCAATG | + |
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Preference number: 2 (lower is better) Translates to: QSSSCCKLSSFGQALSTLSQQPA*RLGPAM Trigger: CATTGCAGGACCCAGTCTGCATGCAGGCTGCTGGCT...AAGAGTAGAGAGAGCTTGACCAAAAGAAGAAAGCTTGCAGCAGCTGGAACTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR-3UTR GCA 90 bp | CCAGCTGCTGCAAGCTTTCTTCTTTTGGTCAAGCTCTCTCTACTCTTCCCCCATCCTCATTCTCCCAAGTaGTGGGGTTACAGGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: PAAASFLLLVKLSLLFPHPHSPK*WGYRCV Trigger: CACACACCTGTAACCCCAGCACTTGGGAGAATGAGG...ATGGGGGAAGAGTAGAGAGAGCTTGACCAAAAGAAGAAAGCTTGCAGCAGCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR CAA 90 bp | CAATTACGTAGCTCAGGCTGCCCTGAACTAACTCAGGATGTCAAGTaGGTTCTAAACTCACGAGCCTCCTGCCTTGACTTCCCAAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: QLRSSGCPELTQDVK*VLNSRASCLDFPSA Trigger: AGCACTTGGGAAGTCAAGGCAGGAGGCTCGTGAGTTTAGAACCAACTTGACATCCTGAGTTAGTTCAGGGCAGCCTGAGCTACGTAATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR-3UTR CCA 90 bp | GCACACACCCGTGAGGAACACAGGAAGAAGGCCAAGGGACGGCTTCAGGTCTCAATGTTTACTAATTTTTaGCATGCTGATACACACAGC | + |
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Preference number: 2 (lower is better) Translates to: AHTREEHRKKAKGRLQVSMFTNF*HADTHS Trigger: GCTGTGTGTATCAGCATGCCAAAAATTAGTAAACAT...TGAGACCTGAAGCCGTCCCTTGGCCTTCTTCCTGTGTTCCTCACGGGTGTGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR-3UTR GCA 90 bp | CTGTTGACTGTGGCTGAAGCTGCTGTGCTCTCCGCTTTCCTTTGTATCTTCACATTCAAACAGCTGCTGTaGCCTCTACATCATAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: LLTVAEAAVLSAFLCIFTFKQLL*PLHHRR Trigger: TCTCCTATGATGTAGAGGGCACAGCAGCTGTTTGAA...TGTGAAGATACAAAGGAAAGCGGAGAGCACAGCAGCTTCAGCCACAGTCAACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR-3UTR CCA 90 bp | TGTATCTTCACATGGGTGAGAAGCAGAGACGACAGGAAAGGCTTAATCCCGGAGCTGATACACACAGCATaGGGCAGGAAATGGATAATT | + |
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Preference number: 2 (lower is better) Translates to: CIFTWVRSRDDRKGLIPELIHTA*GRKWII Trigger: AATTATCCATTTCCTGCCCCATGCTGTGTGTATCAG...CTCCGGGATTAAGCCTTTCCTGTCGTCTCTGCTTCTCACCCATGTGAAGATACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR-3UTR CCA 90 bp | CAGAGTTCCAGCTGCTGCAAGCTTTCTTCTTTTGGTCAAGCTCTCTCTACTCTTGGCATGCTGGCATTCTaGATTTCTATGCCAATCCCT | + |
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Preference number: 2 (lower is better) Translates to: QSSSCCKLSSFGQALSTLGMLAF*ISMPIP Trigger: AGGGATTGGCATAGAAATCCAGAATGCCAGCATGCC...AAGAGTAGAGAGAGCTTGACCAAAAGAAGAAAGCTTGCAGCAGCTGGAACTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR-3UTR GCA 90 bp | CAGAGTTCCAGCTGCTGCAAGCTTTCTTCTTTTGGTCAAGCTCTCTCTACTCTTTCATGTTCAAACAGCTaGTGTGCCCTCTACATCATA | + |
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Preference number: 2 (lower is better) Translates to: QSSSCCKLSSFGQALSTLSCSNS*CALYII Trigger: TATGATGTAGAGGGCACAGCAGCTGTTTGAACATGA...AAGAGTAGAGAGAGCTTGACCAAAAGAAGAAAGCTTGCAGCAGCTGGAACTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR GCA 72 bp | GGGGCTGGGAGCTCCAGCTGCTTTCAGAGCTCCGGCTaGTCAGAGCTGGTTCCTGAGCACACACCCGTGAGG | + |
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Preference number: 3 (lower is better) Translates to: GAGSSSCFQSSG*SELVPEHTPVR Trigger: CCTCACGGGTGTGTGCTCAGGAACCAGCTCTGAGCAGCCGGAGCTCTGAAAGCAGCTGGAGCTCCCAGCCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR GCA 72 bp | GAGCCATCGATGGAGAGGAAGGCAACCAGCAGCAGTTaGTCTCCAGCCCAGGGGCAGAGACTGCCCTTCCTC | + |
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Preference number: 3 (lower is better) Translates to: EPSMERKATSSS*SPAQGQRLPFL Trigger: GAGGAAGGGCAGTCTCTGCCCCTGGGCTGGAGAGCAACTGCTGCTGGTTGCCTTCCTCTCCATCGATGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR TCA 72 bp | AACTCCCATCCCCGCACAGTTAGTCCAGGAGCCCAGTaGCCCCAGGAAGACGGACTAGCTGCCACCAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: NSHPRTVSPGAQ*PQEDGLAATRE Trigger: TTCCCTGGTGGCAGCTAGTCCGTCTTCCTGGGGTCACTGGGCTCCTGGACTAACTGTGCGGGGATGGGAGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR TCA 72 bp | CAGTGCTGGGTGAGGCTGACGGGCAGTCCCCTACAGTaGCCTGGGCACCGTTGGGGAAAGCAAGGGACAAAT | + |
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Preference number: 3 (lower is better) Translates to: QCWVRLTGSPLQ*PGHRWGKQGTN Trigger: ATTTGTCCCTTGCTTTCCCCAACGGTGCCCAGGTCACTGTAGGGGACTGCCCGTCAGCCTCACCCAGCACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR GCA 72 bp | ATGACCCAGCAGCCTAGAACTGGCCTTGGTACTGTGTaGCTGAAGTCCCAGGGGCTGGGAGCTCCAGCTGCT | + |
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Preference number: 3 (lower is better) Translates to: MTQQPRTGLGTV*LKSQGLGAPAA Trigger: AGCAGCTGGAGCTCCCAGCCCCTGGGACTTCAGGCACACAGTACCAAGGCCAGTTCTAGGCTGCTGGGTCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR TCA 72 bp | CTGCTTTCAGAGCTCCGGCTGCTCAGAGCTGGTTCCTaGGCACACACCCGTGAGGAACACAGGAAGAAGGCC | + |
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Preference number: 3 (lower is better) Translates to: LLSELRLLRAGS*AHTREEHRKKA Trigger: GGCCTTCTTCCTGTGTTCCTCACGGGTGTGTGCTCAGGAACCAGCTCTGAGCAGCCGGAGCTCTGAAAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR GCA 72 bp | AAAGCCAGCAGCCTGCATGCAGACTGGGTCCTGCAATaGATTCACGTGTGGCAACAGCAGCACACACCGCGG | + |
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Preference number: 3 (lower is better) Translates to: KASSLHADWVLQ*IHVWQQQHTPR Trigger: CCGCGGTGTGTGCTGCTGTTGCCACACGTGAATGCATTGCAGGACCCAGTCTGCATGCAGGCTGCTGGCTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR-3UTR CAA 90 bp | CCAGCTGCTGCAAGCTTTCTTCTTTTGGTCAAGCTCTCTCTACTCTTCCCCCATGGCAACCAGCAGCAGTaGCTCTCCAGCCCAGGGGCA | + |
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Preference number: 3 (lower is better) Translates to: PAAASFLLLVKLSLLFPHGNQQQ*LSSPGA Trigger: TGCCCCTGGGCTGGAGAGCAACTGCTGCTGGTTGCC...ATGGGGGAAGAGTAGAGAGAGCTTGACCAAAAGAAGAAAGCTTGCAGCAGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR TCA 72 bp | CCAGAGATGCTGCAGGGAACAGGCGAGAGCGTCCTGTaGACTTTGCTAATGCCATGCATGTGGCATGCTGGC | + |
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Preference number: 3 (lower is better) Translates to: PEMLQGTGESVL*TLLMPCMWHAG Trigger: GCCAGCATGCCACATGCATGGCATTAGCAAAGTTCACAGGACGCTCTCGCCTGTTCCCTGCAGCATCTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR GCA 72 bp | CCAGCAGCAGTTGCTCTCCAGCCCAGGGGCAGAGACTaGCCTTCCTCTAACGTGAACATCAAACCTGTTCTC | + |
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Preference number: 3 (lower is better) Translates to: PAAVALQPRGRD*PSSNVNIKPVL Trigger: GAGAACAGGTTTGATGTTCACGTTAGAGGAAGGGCAGTCTCTGCCCCTGGGCTGGAGAGCAACTGCTGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR GCA 72 bp | TTGCTATGTGGTCTCAACCCAGAGCACCCCACTGCCTaGCTCATTCTCCCAAGTGCTGGGGTTACAGGTGTG | + |
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Preference number: 3 (lower is better) Translates to: LLCGLNPEHPTA*LILPSAGVTGV Trigger: CACACCTGTAACCCCAGCACTTGGGAGAATGAGGCAGGCAGTGGGGTGCTCTGGGTTGAGACCACATAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR CCA 72 bp | CCCAAGTCGACCTCAGAAGCTGAACAGAGCCATCGATaGAGAGGAAGGCAACCAGCAGCAGTTGCTCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: PKSTSEAEQSHR*RGRQPAAVALQ Trigger: CTGGAGAGCAACTGCTGCTGGTTGCCTTCCTCTCCATCGATGGCTCTGTTCAGCTTCTGAGGTCGACTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR TCA 72 bp | AGCAGAGACGACAGGAAAGGCTTAATCCCGGAGCTCTaGCCTGACCCAGAGTTCCAGCTGCTGCAAGCTTTC | + |
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Preference number: 3 (lower is better) Translates to: SRDDRKGLIPEL*PDPEFQLLQAF Trigger: GAAAGCTTGCAGCAGCTGGAACTCTGGGTCAGGTCAGAGCTCCGGGATTAAGCCTTTCCTGTCGTCTCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| 3UTR-3UTR CAA 90 bp | TGTATCTTCACATGGGTGAGAAGCAGAGACGACAGGAAAGGCTTAATCCCGGAGCACGAGCCTCCTGCCTaGACTTCCCAAGTGCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: CIFTWVRSRDDRKGLIPEHEPPA*TSQVLG Trigger: TCCCAGCACTTGGGAAGTCAAGGCAGGAGGCTCGTG...CTCCGGGATTAAGCCTTTCCTGTCGTCTCTGCTTCTCACCCATGTGAAGATACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
||
| 3UTR TCA 72 bp | AGACGACAGGAAAGGCTTAATCCCGGAGCTCTGACCTaGCCCAGAGTTCCAGCTGCTGCAAGCTTTCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: RRQERLNPGALT*PRVPAAASFLL Trigger: AAGAAGAAAGCTTGCAGCAGCTGGAACTCTGGGTCAGGTCAGAGCTCCGGGATTAAGCCTTTCCTGTCGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
||
| 3UTR GCA 72 bp | GCCATGCATGTGGCATGCTGGCATTCTGGATTTCTATaGCAATCCCTGGGTATGACCCAGCAGCCTAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: AMHVACWHSGFL*QSLGMTQQPRT Trigger: AGTTCTAGGCTGCTGGGTCATACCCAGGGATTGGCATAGAAATCCAGAATGCCAGCATGCCACATGCATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
||
| 3UTR GCA 72 bp | TCCCGGAGCTCTGACCTGACCCAGAGTTCCAGCTGCTaGAAGCTTTCTTCTTTTGGTCAAGCTCTCTCTACT | + |
|
Preference number: 3 (lower is better) Translates to: SRSSDLTQSSSC*KLSSFGQALST Trigger: AGTAGAGAGAGCTTGACCAAAAGAAGAAAGCTTGCAGCAGCTGGAACTCTGGGTCAGGTCAGAGCTCCGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
||
| 3UTR GCA 72 bp | CAGGATGTCAAGTTGGTTCTAAACTCACGAGCCTCCTaGCTTGACTTCCCAAGTGCTGGGATTATGGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: QDVKLVLNSRAS*LDFPSAGIMGV Trigger: CACACCCATAATCCCAGCACTTGGGAAGTCAAGGCAGGAGGCTCGTGAGTTTAGAACCAACTTGACATCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
||
| 3UTR GCA 72 bp | GCAAAAGGCATCAAACTGCTTCTAAAGCCAGCAGCCTaGATGCAGACTGGGTCCTGCAATGCATTCACGTGT | + |
|
Preference number: 3 (lower is better) Translates to: AKGIKLLLKPAA*MQTGSCNAFTC Trigger: ACACGTGAATGCATTGCAGGACCCAGTCTGCATGCAGGCTGCTGGCTTTAGAAGCAGTTTGATGCCTTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
||
| 3UTR GCA 72 bp | AGGCTGGGGTTAATCCTCATGTTCAAACAGCTGCTGTaGCCTCTACATCATAGGAGACCCTTAGCTAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: RLGLILMFKQLL*PLHHRRPLAST Trigger: GGTGCTAGCTAAGGGTCTCCTATGATGTAGAGGGCACAGCAGCTGTTTGAACATGAGGATTAACCCCAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
||
| 3UTR GCA 72 bp | CGTCCTGTGAACTTTGCTAATGCCATGCATGTGGCATaGTGGCATTCTGGATTTCTATGCCAATCCCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: RPVNFANAMHVA*WHSGFLCQSLG Trigger: ACCCAGGGATTGGCATAGAAATCCAGAATGCCAGCATGCCACATGCATGGCATTAGCAAAGTTCACAGGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
||
| 3UTR CCA 72 bp | GCTGCTGTGCTCTCCGCTTTCCTTTGTATCTTCACATaGGTGAGAAGCAGAGACGACAGGAAAGGCTTAATC | + |
|
Preference number: 3 (lower is better) Translates to: AAVLSAFLCIFT*VRSRDDRKGLI Trigger: GATTAAGCCTTTCCTGTCGTCTCTGCTTCTCACCCATGTGAAGATACAAAGGAAAGCGGAGAGCACAGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
||
| 3UTR TCA 72 bp | CCTTATAGGAAGAGGAGTTGTGCTGTTGACTGTGGCTaGAGCTGCTGTGCTCTCCGCTTTCCTTTGTATCTT | + |
|
Preference number: 3 (lower is better) Translates to: PYRKRSCAVDCG*SCCALRFPLYL Trigger: AAGATACAAAGGAAAGCGGAGAGCACAGCAGCTTCAGCCACAGTCAACAGCACAACTCCTCTTCCTATAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGTTCCAGCTGCTGCAAGCTTTCTTCTTTTGGTCAAGCTCTCTCTACTCTTCAGGGTTTTGCTCTCTaGCTATGTGGTCTCAACCCA | + |
|
Preference number: 3 (lower is better) Translates to: QSSSCCKLSSFGQALSTLQGFAL*LCGLNP Trigger: TGGGTTGAGACCACATAGCAAGAGAGCAAAACCCTG...AAGAGTAGAGAGAGCTTGACCAAAAGAAGAAAGCTTGCAGCAGCTGGAACTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGTTCCAGCTGCTGCAAGCTTTCTTCTTTTGGTCAAGCTCTCTCTACTCTTACTCAGGATGTCAAGTaGGTTCTAAACTCACGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: QSSSCCKLSSFGQALSTLTQDVK*VLNSRA Trigger: GGCTCGTGAGTTTAGAACCAACTTGACATCCTGAGT...AAGAGTAGAGAGAGCTTGACCAAAAGAAGAAAGCTTGCAGCAGCTGGAACTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
||
| 3UTR CCA 72 bp | GACCCAGAGTTCCAGCTGCTGCAAGCTTTCTTCTTTTaGTCAAGCTCTCTCTACTCTTCCCCCATTTCATAT | + |
|
Preference number: 3 (lower is better) Translates to: DPEFQLLQAFFF*SSSLYSSPISY Trigger: ATATGAAATGGGGGAAGAGTAGAGAGAGCTTGACCAAAAGAAGAAAGCTTGCAGCAGCTGGAACTCTGGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
||
| 3UTR TCA 72 bp | AATCCTTTTCAAACTTTAGCTACTTATACACTGAGATaGGATGGTCAAAACACACAAGCAGAATCTGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: NPFQTLATYTLR*DGQNTQAESAG Trigger: TCCTGCAGATTCTGCTTGTGTGTTTTGACCATCTCATCTCAGTGTATAAGTAGCTAAAGTTTGAAAAGGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
||
| 3UTR CCA 72 bp | TTTTCAAACTTTAGCTACTTATACACTGAGATGAGATaGTCAAAACACACAAGCAGAATCTGCAGGAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: FSNFSYLYTEMR*SKHTSRICRRK Trigger: TTTTCTCCTGCAGATTCTGCTTGTGTGTTTTGACCATCTCATCTCAGTGTATAAGTAGCTAAAGTTTGAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
||
| CDS-3UTR TCA 90 bp | ACAGATAGGCACCAGAAACTTCCTCCACAGCAGTGCTGGGTGAGGCTGACGGGCAAACTCGACTGGTGCTaGTGGCTGCAGCCTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TDRHQKLPPQQCWVRLTGKLDWC*WLQPWL Trigger: AAGCCAAGGCTGCAGCCATCAGCACCAGTCGAGTTT...GCCCGTCAGCCTCACCCAGCACTGCTGTGGAGGAAGTTTCTGGTGCCTATCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
||
| CDS-3UTR CCA 90 bp | TCCACAGCAGTGCTGGGTGAGGCTGACGGGCAGTCCCCTACAGTGACCTGGGCAAAGTATTTCCTTTTCTaGGCTTTCCCCGGAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: STAVLGEADGQSPTVTWAKYFLF*AFPGAA Trigger: TGCTGCTCCGGGGAAAGCCCAGAAAAGGAAATACTT...TGCCCAGGTCACTGTAGGGGACTGCCCGTCAGCCTCACCCAGCACTGCTGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
||
| CDS-3UTR GCA 90 bp | TCCACAGCAGTGCTGGGTGAGGCTGACGGGCAGTCCCCTACAGTGACCTGGGCACTTTGCAAAACGTCATaGGGAGATCTGGGTCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: STAVLGEADGQSPTVTWALCKTS*GDLGLR Trigger: TCTTAGACCCAGATCTCCGCATGACGTTTTGCAAAG...TGCCCAGGTCACTGTAGGGGACTGCCCGTCAGCCTCACCCAGCACTGCTGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
||
| CDS-3UTR CCA 90 bp | GCACACACCCGTGAGGAACACAGGAAGAAGGCCAAGGGACGGCTTCAGGTCTCATCCTCATCAGAAGAGTaGTGCACGTCAACCCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: AHTREEHRKKAKGRLQVSSSSEE*CTSTHS Trigger: TGAGTGGGTTGACGTGCACCACTCTTCTGATGAGGA...TGAGACCTGAAGCCGTCCCTTGGCCTTCTTCCTGTGTTCCTCACGGGTGTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
||
| CDS-3UTR TCA 90 bp | AGTCGACCTCAGAAGCTGAACAGAGCCATCGATGGAGAGGAAGGCAACCAGCAGATCCTCCTCGGATTCTaGGTCACTGTCCTGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRPQKLNRAIDGEEGNQQILLGF*VTVLLL Trigger: GAGAAGCAGGACAGTGACTCAGAATCCGAGGAGGAT...CTGCTGGTTGCCTTCCTCTCCATCGATGGCTCTGTTCAGCTTCTGAGGTCGACT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
||
| CDS-3UTR TCA 90 bp | GCACACACCCGTGAGGAACACAGGAAGAAGGCCAAGGGACGGCTTCAGGTCTCACAAAAGGGTAGAAGTTaGAGAGGAAAAGCTCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: AHTREEHRKKAKGRLQVSQKGRS*RGKARE Trigger: TTCACGAGCTTTTCCTCTTCAACTTCTACCCTTTTG...TGAGACCTGAAGCCGTCCCTTGGCCTTCTTCCTGTGTTCCTCACGGGTGTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
||
| CDS-3UTR TCA 90 bp | AGGAAGTCTGAGGCAAAAGGCATCAAACTGCTTCTAAAGCCAGCAGCCTGCATGGTCACAAGCAACGACTaGATAATCTCTGGGGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: RKSEAKGIKLLLKPAACMVTSND*IISGGT Trigger: GGTGCCCCCAGAGATTATTCAGTCGTTGCTTGTGAC...CATGCAGGCTGCTGGCTTTAGAAGCAGTTTGATGCCTTTTGCCTCAGACTTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
||
| 3UTR CAA 72 bp | AGCTCAGGCTGCCCTGAACTAACTCAGGATGTCAAGTaGGTTCTAAACTCACGAGCCTCCTGCCTTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSGCPELTQDVK*VLNSRASCLDF Trigger: GAAGTCAAGGCAGGAGGCTCGTGAGTTTAGAACCAACTTGACATCCTGAGTTAGTTCAGGGCAGCCTGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
||
| CDS-3UTR GCA 90 bp | CCAGCTGCTGCAAGCTTTCTTCTTTTGGTCAAGCTCTCTCTACTCTTCCCCCATTTACAGCTCTCCAGCTaGTTCAGAAGCTTCTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PAAASFLLLVKLSLLFPHLQLSS*FRSFSA Trigger: CGCAGAGAAGCTTCTGAAGCAGCTGGAGAGCTGTAA...ATGGGGGAAGAGTAGAGAGAGCTTGACCAAAAGAAGAAAGCTTGCAGCAGCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
||
| 3UTR CAA 72 bp | GAGAACCAGCCACCCAACGATAGCTCAAAGATAGCTTaGCTTCTCAATTACGTAGCTCAGGCTGCCCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ENQPPNDSSKIA*LLNYVAQAALN Trigger: GTTCAGGGCAGCCTGAGCTACGTAATTGAGAAGCAAAGCTATCTTTGAGCTATCGTTGGGTGGCTGGTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
||
| CDS-3UTR TCA 90 bp | GTAAACAAATGTTTACTAATTTTTGGCATGCTGATACACACAGCATGGGGCAGGCCTGCGGGAAGTTACTaGGATGCTCCGGGTAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: VNKCLLIFGMLIHTAWGRPAGSY*DAPGST Trigger: AGTGCTACCCGGAGCATCTCAGTAACTTCCCGCAGG...CCTGCCCCATGCTGTGTGTATCAGCATGCCAAAAATTAGTAAACATTTGTTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
||
| CDS-3UTR TCA 90 bp | TGTAAACAAATGTTTACTAATTTTTGGCATGCTGATACACACAGCATGGGGCAGCCTGCGGGAAGTTACTaGGATGCTCCGGGTAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: CKQMFTNFWHADTHSMGQPAGSY*DAPGST Trigger: AGTGCTACCCGGAGCATCTCAGTAACTTCCCGCAGG...CTGCCCCATGCTGTGTGTATCAGCATGCCAAAAATTAGTAAACATTTGTTTACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
||
| CDS-3UTR TCA 90 bp | CAAATGTTTACTAATTTTTGGCATGCTGATACACACAGCATGGGGCAGGAAATGATCCTCCTCGGATTCTaGGTCACTGTCCTGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QMFTNFWHADTHSMGQEMILLGF*VTVLLL Trigger: GAGAAGCAGGACAGTGACTCAGAATCCGAGGAGGAT...CATTTCCTGCCCCATGCTGTGTGTATCAGCATGCCAAAAATTAGTAAACATTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
||
| CDS-3UTR TCA 90 bp | AAATGTTTACTAATTTTTGGCATGCTGATACACACAGCATGGGGCAGGAAATGGACAGAAGGATCTTCGTaGCTTCTCTCTGGTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KCLLIFGMLIHTAWGRKWTEGSS*LLSGGA Trigger: AGCCCCACCAGAGAGAAGTCACGAAGATCCTTCTGT...CCATTTCCTGCCCCATGCTGTGTGTATCAGCATGCCAAAAATTAGTAAACATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
||
| CDS-3UTR TCA 90 bp | CAAATGTTTACTAATTTTTGGCATGCTGATACACACAGCATGGGGCAGGAAATGGTCACAAGCAACGACTaGATAATCTCTGGGGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: QMFTNFWHADTHSMGQEMVTSND*IISGGT Trigger: GGTGCCCCCAGAGATTATTCAGTCGTTGCTTGTGAC...CATTTCCTGCCCCATGCTGTGTGTATCAGCATGCCAAAAATTAGTAAACATTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
||
| CDS-3UTR TCA 90 bp | AACAAATGTTTACTAATTTTTGGCATGCTGATACACACAGCATGGGGCAGGAAAAAACTCGACTGGTGCTaGTGGCTGCAGCCTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NKCLLIFGMLIHTAWGRKKLDWC*WLQPWL Trigger: AAGCCAAGGCTGCAGCCATCAGCACCAGTCGAGTTT...TTTCCTGCCCCATGCTGTGTGTATCAGCATGCCAAAAATTAGTAAACATTTGTT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
||
| CDS-3UTR CCA 90 bp | GTAAACAAATGTTTACTAATTTTTGGCATGCTGATACACACAGCATGGGGCAGGCGATGGAGGCTTCAGTaGGTTTACCCCGGAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VNKCLLIFGMLIHTAWGRRWRLQ*VYPGTS Trigger: AGAAGTTCCGGGGTAAACCCACTGAAGCCTCCATCG...CCTGCCCCATGCTGTGTGTATCAGCATGCCAAAAATTAGTAAACATTTGTTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
||
| CDS-3UTR CCA 90 bp | AAGTCGACCTCAGAAGCTGAACAGAGCCATCGATGGAGAGGAAGGCAACCAGCACTTTGTTTGTGGAACTaGAAAATGGGTTTATTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSTSEAEQSHRWRGRQPALCLWN*KMGLFW Trigger: CCAAAATAAACCCATTTTCCAGTTCCACAAACAAAG...TGCTGGTTGCCTTCCTCTCCATCGATGGCTCTGTTCAGCTTCTGAGGTCGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
||
| CDS-3UTR TCA 90 bp | TGTAAACAAATGTTTACTAATTTTTGGCATGCTGATACACACAGCATGGGGCAGACAGAAGGATCTTCGTaGCTTCTCTCTGGTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CKQMFTNFWHADTHSMGQTEGSS*LLSGGA Trigger: AGCCCCACCAGAGAGAAGTCACGAAGATCCTTCTGT...CTGCCCCATGCTGTGTGTATCAGCATGCCAAAAATTAGTAAACATTTGTTTACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
||
| CDS-3UTR TCA 90 bp | CAAATGTTTACTAATTTTTGGCATGCTGATACACACAGCATGGGGCAGGAAATGGGACCGTGCTGTTTTTaGCCGGACATTCTGGCTATA | + |
|
Preference number: 4 (lower is better) Translates to: QMFTNFWHADTHSMGQEMGPCCF*PDILAI Trigger: TATAGCCAGAATGTCCGGTCAAAAACAGCACGGTCC...CATTTCCTGCCCCATGCTGTGTGTATCAGCATGCCAAAAATTAGTAAACATTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
||
| CDS-3UTR GCA 90 bp | AAATGTTTACTAATTTTTGGCATGCTGATACACACAGCATGGGGCAGGAAATGGCTTCAGAAGCTTCTCTaGGAAGTCTTGGGGATCATG | + |
|
Preference number: 4 (lower is better) Translates to: KCLLIFGMLIHTAWGRKWLQKLL*EVLGIM Trigger: CATGATCCCCAAGACTTCGCAGAGAAGCTTCTGAAG...CCATTTCCTGCCCCATGCTGTGTGTATCAGCATGCCAAAAATTAGTAAACATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
||
| CDS-3UTR GCA 90 bp | CAAATGTTTACTAATTTTTGGCATGCTGATACACACAGCATGGGGCAGGAAATGTTCGTGGCAATTGCTTaGTGCTCCTCATCAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QMFTNFWHADTHSMGQEMFVAIA*CSSSEE Trigger: CTCTTCTGATGAGGAGCAGCAAGCAATTGCCACGAA...CATTTCCTGCCCCATGCTGTGTGTATCAGCATGCCAAAAATTAGTAAACATTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
||
| CDS-3UTR CCA 90 bp | TGTAAACAAATGTTTACTAATTTTTGGCATGCTGATACACACAGCATGGGGCAGTCCTCATCAGAAGAGTaGTGCACGTCAACCCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: CKQMFTNFWHADTHSMGQSSSEE*CTSTHS Trigger: TGAGTGGGTTGACGTGCACCACTCTTCTGATGAGGA...CTGCCCCATGCTGTGTGTATCAGCATGCCAAAAATTAGTAAACATTTGTTTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
||
| CDS-3UTR CCA 90 bp | GTAAACAAATGTTTACTAATTTTTGGCATGCTGATACACACAGCATGGGGCAGGAAGTATTTCCTTTTCTaGGCTTTCCCCGGAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VNKCLLIFGMLIHTAWGRKYFLF*AFPGAA Trigger: TGCTGCTCCGGGGAAAGCCCAGAAAAGGAAATACTT...CCTGCCCCATGCTGTGTGTATCAGCATGCCAAAAATTAGTAAACATTTGTTTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
||
| CDS-3UTR GCA 90 bp | AACAAATGTTTACTAATTTTTGGCATGCTGATACACACAGCATGGGGCAGGAAACTTCAGAAGCTTCTCTaGGAAGTCTTGGGGATCATG | + |
|
Preference number: 4 (lower is better) Translates to: NKCLLIFGMLIHTAWGRKLQKLL*EVLGIM Trigger: CATGATCCCCAAGACTTCGCAGAGAAGCTTCTGAAG...TTTCCTGCCCCATGCTGTGTGTATCAGCATGCCAAAAATTAGTAAACATTTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
||
| CDS-3UTR GCA 90 bp | TGTAAACAAATGTTTACTAATTTTTGGCATGCTGATACACACAGCATGGGGCAGTTCGTGGCAATTGCTTaGTGCTCCTCATCAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CKQMFTNFWHADTHSMGQFVAIA*CSSSEE Trigger: CTCTTCTGATGAGGAGCAGCAAGCAATTGCCACGAA...CTGCCCCATGCTGTGTGTATCAGCATGCCAAAAATTAGTAAACATTTGTTTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
||
| CDS-3UTR GCA 90 bp | AACAAATGTTTACTAATTTTTGGCATGCTGATACACACAGCATGGGGCAGGAAACTTTGCAAAACGTCATaGGGAGATCTGGGTCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NKCLLIFGMLIHTAWGRKLCKTS*GDLGLR Trigger: TCTTAGACCCAGATCTCCGCATGACGTTTTGCAAAG...TTTCCTGCCCCATGCTGTGTGTATCAGCATGCCAAAAATTAGTAAACATTTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
||
| CDS-3UTR CCA 90 bp | AACAAATGTTTACTAATTTTTGGCATGCTGATACACACAGCATGGGGCAGGAAACTTTGTTTGTGGAACTaGAAAATGGGTTTATTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NKCLLIFGMLIHTAWGRKLCLWN*KMGLFW Trigger: CCAAAATAAACCCATTTTCCAGTTCCACAAACAAAG...TTTCCTGCCCCATGCTGTGTGTATCAGCATGCCAAAAATTAGTAAACATTTGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
||
| CDS-3UTR CAA 90 bp | GAGAGGAAGGCAACCAGCAGCAGTTGCTCTCCAGCCCAGGGGCAGAGACTGCCCAGTAAGATCAAGGCTTaGCAAAACGTCATGCGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ERKATSSSCSPAQGQRLPSKIKA*QNVMRR Trigger: TCTCCGCATGACGTTTTGCAAAGCCTTGATCTTACT...GGGCAGTCTCTGCCCCTGGGCTGGAGAGCAACTGCTGCTGGTTGCCTTCCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
||
| CDS-3UTR CAA 90 bp | CAGCAGCCTGCATGCAGACTGGGTCCTGCAATGCATTCACGTGTGGCAACAGCAGCAGCAACCAATATCTaGGTGATCTTGGAGAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: QQPACRLGPAMHSRVATAAATNI*VILEKH Trigger: GTGTTTCTCCAAGATCACCAAGATATTGGTTGCTGC...TGCTGTTGCCACACGTGAATGCATTGCAGGACCCAGTCTGCATGCAGGCTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
||
| CDS-3UTR CAA 90 bp | AAGTCGACCTCAGAAGCTGAACAGAGCCATCGATGGAGAGGAAGGCAACCAGCAAGCACCACGTTCACTTaGTTGTTCTTGTGTTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: KSTSEAEQSHRWRGRQPASTTFT*LFLCLA Trigger: CGCCAAACACAAGAACAACAAAGTGAACGTGGTGCT...TGCTGGTTGCCTTCCTCTCCATCGATGGCTCTGTTCAGCTTCTGAGGTCGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
||
| CDS-3UTR CAA 90 bp | AAGTCGACCTCAGAAGCTGAACAGAGCCATCGATGGAGAGGAAGGCAACCAGCATTGTCAGTAACAAAATaGTTGGCCACCGTCACAAGC | + |
|
Preference number: 5 (lower is better) Translates to: KSTSEAEQSHRWRGRQPALSVTK*LATVTS Trigger: GCTTGTGACGGTGGCCAACAATTTTGTTACTGACAA...TGCTGGTTGCCTTCCTCTCCATCGATGGCTCTGTTCAGCTTCTGAGGTCGACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| CDS-3UTR CAA 90 bp | AGTCGACCTCAGAAGCTGAACAGAGCCATCGATGGAGAGGAAGGCAACCAGCAGTTCACTTTGTTGTTCTaGTGTTTGGCGTTGATGTTC | + |
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Preference number: 5 (lower is better) Translates to: SRPQKLNRAIDGEEGNQQFTLLF*CLALMF Trigger: GAACATCAACGCCAAACACAAGAACAACAAAGTGAA...CTGCTGGTTGCCTTCCTCTCCATCGATGGCTCTGTTCAGCTTCTGAGGTCGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| CDS-3UTR CAA 90 bp | CAGAGTTCCAGCTGCTGCAAGCTTTCTTCTTTTGGTCAAGCTCTCTCTACTCTTAGGACCGTGCTGTTTTaGACCGGACATTCTGGCTAT | + |
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Preference number: 5 (lower is better) Translates to: QSSSCCKLSSFGQALSTLRTVLF*TGHSGY Trigger: ATAGCCAGAATGTCCGGTCAAAAACAGCACGGTCCT...AAGAGTAGAGAGAGCTTGACCAAAAGAAGAAAGCTTGCAGCAGCTGGAACTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| CDS-3UTR CAA 90 bp | TGTATCTTCACATGGGTGAGAAGCAGAGACGACAGGAAAGGCTTAATCCCGGAGTTGGCGTTGATGTTCTaGATGTCAGTCACAATGTGT | + |
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Preference number: 5 (lower is better) Translates to: CIFTWVRSRDDRKGLIPELALMF*MSVTMC Trigger: ACACATTGTGACTGACATCAAGAACATCAACGCCAA...CTCCGGGATTAAGCCTTTCCTGTCGTCTCTGCTTCTCACCCATGTGAAGATACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| CDS-3UTR CAA 90 bp | CCAGCTGCTGCAAGCTTTCTTCTTTTGGTCAAGCTCTCTCTACTCTTCCCCCATTTTATAGTGGTTATATaGCTGAAGGAACTCCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: PAAASFLLLVKLSLLFPHFIVVI*LKELLH Trigger: GTGGAGGAGTTCCTTCAGCAATATAACCACTATAAA...ATGGGGGAAGAGTAGAGAGAGCTTGACCAAAAGAAGAAAGCTTGCAGCAGCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| CDS-3UTR CAA 90 bp | AGGAAGTCTGAGGCAAAAGGCATCAAACTGCTTCTAAAGCCAGCAGCCTGCATGTTGTTGTTCTTGTGTTaGGCGTTGATGTTCTTGATG | + |
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Preference number: 5 (lower is better) Translates to: RKSEAKGIKLLLKPAACMLLFLC*ALMFLM Trigger: CATCAAGAACATCAACGCCAAACACAAGAACAACAA...CATGCAGGCTGCTGGCTTTAGAAGCAGTTTGATGCCTTTTGCCTCAGACTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| CDS-3UTR CAA 90 bp | CAGAGTTCCAGCTGCTGCAAGCTTTCTTCTTTTGGTCAAGCTCTCTCTACTCTTACCACGTTCACTTTGTaGTTCTTGTGTTTGGCGTTG | + |
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Preference number: 5 (lower is better) Translates to: QSSSCCKLSSFGQALSTLTTFTL*FLCLAL Trigger: CAACGCCAAACACAAGAACAACAAAGTGAACGTGGT...AAGAGTAGAGAGAGCTTGACCAAAAGAAGAAAGCTTGCAGCAGCTGGAACTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031364.5 |
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| CDS-3UTR CAA 90 bp | CAAATGTTTACTAATTTTTGGCATGCTGATACACACAGCATGGGGCAGGAAATGCTTCGTGGCAATTGCTaGCTGCTCCTCATCAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: QMFTNFWHADTHSMGQEMLRGNC*LLLIRR Trigger: TCTTCTGATGAGGAGCAGCAAGCAATTGCCACGAAG...CATTTCCTGCCCCATGCTGTGTGTATCAGCATGCCAAAAATTAGTAAACATTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
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| CDS-3UTR CAA 90 bp | GTAAACAAATGTTTACTAATTTTTGGCATGCTGATACACACAGCATGGGGCAGGAGGACCGTGCTGTTTTaGACCGGACATTCTGGCTAT | + |
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Preference number: 5 (lower is better) Translates to: VNKCLLIFGMLIHTAWGRRTVLF*TGHSGY Trigger: ATAGCCAGAATGTCCGGTCAAAAACAGCACGGTCCT...CCTGCCCCATGCTGTGTGTATCAGCATGCCAAAAATTAGTAAACATTTGTTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
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| CDS-3UTR CAA 90 bp | AAATGTTTACTAATTTTTGGCATGCTGATACACACAGCATGGGGCAGGAAATGGAGCACCACGTTCACTTaGTTGTTCTTGTGTTTGGCG | + |
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Preference number: 5 (lower is better) Translates to: KCLLIFGMLIHTAWGRKWSTTFT*LFLCLA Trigger: CGCCAAACACAAGAACAACAAAGTGAACGTGGTGCT...CCATTTCCTGCCCCATGCTGTGTGTATCAGCATGCCAAAAATTAGTAAACATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
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| CDS-3UTR CAA 90 bp | AACAAATGTTTACTAATTTTTGGCATGCTGATACACACAGCATGGGGCAGGAAACTTCGTGGCAATTGCTaGCTGCTCCTCATCAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: NKCLLIFGMLIHTAWGRKLRGNC*LLLIRR Trigger: TCTTCTGATGAGGAGCAGCAAGCAATTGCCACGAAG...TTTCCTGCCCCATGCTGTGTGTATCAGCATGCCAAAAATTAGTAAACATTTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
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| CDS-3UTR CAA 90 bp | GTAAACAAATGTTTACTAATTTTTGGCATGCTGATACACACAGCATGGGGCAGGTTGTCAGTAACAAAATaGTTGGCCACCGTCACAAGC | + |
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Preference number: 5 (lower is better) Translates to: VNKCLLIFGMLIHTAWGRLSVTK*LATVTS Trigger: GCTTGTGACGGTGGCCAACAATTTTGTTACTGACAA...CCTGCCCCATGCTGTGTGTATCAGCATGCCAAAAATTAGTAAACATTTGTTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
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| CDS-3UTR CAA 90 bp | AACAAATGTTTACTAATTTTTGGCATGCTGATACACACAGCATGGGGCAGGAAAAGTAAGATCAAGGCTTaGCAAAACGTCATGCGGAGA | + |
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Preference number: 5 (lower is better) Translates to: NKCLLIFGMLIHTAWGRKSKIKA*QNVMRR Trigger: TCTCCGCATGACGTTTTGCAAAGCCTTGATCTTACT...TTTCCTGCCCCATGCTGTGTGTATCAGCATGCCAAAAATTAGTAAACATTTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
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| CDS-3UTR CAA 90 bp | TGTAAACAAATGTTTACTAATTTTTGGCATGCTGATACACACAGCATGGGGCAGACCACGTTCACTTTGTaGTTCTTGTGTTTGGCGTTG | + |
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Preference number: 5 (lower is better) Translates to: CKQMFTNFWHADTHSMGQTTFTL*FLCLAL Trigger: CAACGCCAAACACAAGAACAACAAAGTGAACGTGGT...CTGCCCCATGCTGTGTGTATCAGCATGCCAAAAATTAGTAAACATTTGTTTACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
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| CDS-3UTR CAA 90 bp | TGTAAACAAATGTTTACTAATTTTTGGCATGCTGATACACACAGCATGGGGCAGGCAGCAACCAATATCTaGGTGATCTTGGAGAAACAC | + |
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Preference number: 5 (lower is better) Translates to: CKQMFTNFWHADTHSMGQAATNI*VILEKH Trigger: GTGTTTCTCCAAGATCACCAAGATATTGGTTGCTGC...CTGCCCCATGCTGTGTGTATCAGCATGCCAAAAATTAGTAAACATTTGTTTACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
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| CDS-3UTR CAA 90 bp | AAATGTTTACTAATTTTTGGCATGCTGATACACACAGCATGGGGCAGGAAATGGTTGTTGTTCTTGTGTTaGGCGTTGATGTTCTTGATG | + |
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Preference number: 5 (lower is better) Translates to: KCLLIFGMLIHTAWGRKWLLFLC*ALMFLM Trigger: CATCAAGAACATCAACGCCAAACACAAGAACAACAA...CCATTTCCTGCCCCATGCTGTGTGTATCAGCATGCCAAAAATTAGTAAACATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
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| CDS-3UTR CAA 90 bp | TGTAAACAAATGTTTACTAATTTTTGGCATGCTGATACACACAGCATGGGGCAGTTTATAGTGGTTATATaGCTGAAGGAACTCCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: CKQMFTNFWHADTHSMGQFIVVI*LKELLH Trigger: GTGGAGGAGTTCCTTCAGCAATATAACCACTATAAA...CTGCCCCATGCTGTGTGTATCAGCATGCCAAAAATTAGTAAACATTTGTTTACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
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| CDS-3UTR CAA 90 bp | AACAAATGTTTACTAATTTTTGGCATGCTGATACACACAGCATGGGGCAGGAAATTCACTTTGTTGTTCTaGTGTTTGGCGTTGATGTTC | + |
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Preference number: 5 (lower is better) Translates to: NKCLLIFGMLIHTAWGRKFTLLF*CLALMF Trigger: GAACATCAACGCCAAACACAAGAACAACAAAGTGAA...TTTCCTGCCCCATGCTGTGTGTATCAGCATGCCAAAAATTAGTAAACATTTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
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| CDS-3UTR CAA 90 bp | CAAATGTTTACTAATTTTTGGCATGCTGATACACACAGCATGGGGCAGGAAATGTTTTCCAGCTTCTTCTaGTTTTTGGAGCCTTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: QMFTNFWHADTHSMGQEMFSSFF*FLEPFF Trigger: AAAGAAAGGCTCCAAAAACAAGAAGAAGCTGGAAAA...CATTTCCTGCCCCATGCTGTGTGTATCAGCATGCCAAAAATTAGTAAACATTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
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| CDS-3UTR CAA 90 bp | AAATGTTTACTAATTTTTGGCATGCTGATACACACAGCATGGGGCAGGAAATGGTTTTCCAGCTTCTTCTaGTTTTTGGAGCCTTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: KCLLIFGMLIHTAWGRKWFSSFF*FLEPFF Trigger: AAAGAAAGGCTCCAAAAACAAGAAGAAGCTGGAAAA...CCATTTCCTGCCCCATGCTGTGTGTATCAGCATGCCAAAAATTAGTAAACATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
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| CDS TCA 72 bp | AGGAGAGCAGGTCCTTCAGCTCCTGCGGGAAGTTACTaGGATGCTCCGGGTAGCACTGGCCAATCTGCGCCA | + |
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Preference number: 6 (lower is better) Translates to: RRAGPSAPAGSY*DAPGSTGQSAP Trigger: TGGCGCAGATTGGCCAGTGCTACCCGGAGCATCTCAGTAACTTCCCGCAGGAGCTGAAGGACCTGCTCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
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| CDS CCA 72 bp | TTCGTGGCAATTGCTTGCTGCTCCTCATCAGAAGAGTaGTGCACGTCAACCCACTCACCATCCTCTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: FVAIACCSSSEE*CTSTHSPSSSS Trigger: GGAGGAAGAGGATGGTGAGTGGGTTGACGTGCACCACTCTTCTGATGAGGAGCAGCAAGCAATTGCCACGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
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| CDS CCA 72 bp | TCCTCGTCACTGTCAATTTCTAAGTATTTCCTTTTCTaGGCTTTCCCCGGAGCAGCATCCATTTCCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SSSLSISKYFLF*AFPGAASISFF Trigger: GAAGAAGGAAATGGATGCTGCTCCGGGGAAAGCCCAGAAAAGGAAATACTTAGAAATTGACAGTGACGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031364.5 ENSMUST00000201143.2 |
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