Pregenerated sensors for SCYL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069539Ensembl transcript IDs: ENSMUST00000092227.12, ENSMUST00000174252.8
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCCAGCGCCACTGTCTTACAAAAGCACCCAAACTAGCACAGCATTaGGGCTCTTCCCTTTCAATGAAGACAAATGAACAGGAAGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: CQRHCLTKAPKLAQH*GSSLSMKTNEQEGR Trigger: CCTGCCTTCCTGTTCATTTGTCTTCATTGAAAGGGAAGAGCCTCAATGCTGTGCTAGTTTGGGTGCTTTTGTAAGACAGTGGCGCTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| 3UTR TCA 90 bp | TCTTCCCTCCCTCCCTCCCTTCCTCCTTTCCTTTCTAACAGTGACTaGTTACAGATACTAAAATGTCTGAACACAAAGTTTCTGGGACTT | + |
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Preference number: 1 (lower is better) Translates to: SSLPPSLPPFLSNSD*LQILKCLNTKFLGL Trigger: AAGTCCCAGAAACTTTGTGTTCAGACATTTTAGTATCTGTAATCAGTCACTGTTAGAAAGGAAAGGAGGAAGGGAGGGAGGGAGGGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174252.8 |
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| 3UTR-3UTR GCA 90 bp | AATGACCCAATCCTTCCCGTGCCAGCGCCACTGTCTTACAAAAGCACCCAAACTTGGCAGGGAAGCAGGTaGTCTCTGTCACAGAAACAA | + |
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Preference number: 2 (lower is better) Translates to: NDPILPVPAPLSYKSTQTWQGSR*SLSQKQ Trigger: TTGTTTCTGTGACAGAGAGCACCTGCTTCCCTGCCA...AGTTTGGGTGCTTTTGTAAGACAGTGGCGCTGGCACGGGAAGGATTGGGTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| 3UTR-3UTR GCA 90 bp | ATGAACAGGAAGGCAGGTACCAGGTGGACTTCCAGTTATCATCAACTCAAGATTTCCACACACCTCCTATaGGGGCTGGCAGGGAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: MNRKAGTRWTSSYHQLKISTHLL*GLAGKQ Trigger: CTGCTTCCCTGCCAGCCCGCATAGGAGGTGTGTGGA...AATCTTGAGTTGATGATAACTGGAAGTCCACCTGGTACCTGCCTTCCTGTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGGAAGGCAGGTACCAGGTGGACTTCCAGTTATCATCAACTCAAGATTTTTAACCTCCTATGCGGGCTaGCAGGGAAGCAGGTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: TGRQVPGGLPVIINSRFLTSYAG*QGSRCS Trigger: AGAGCACCTGCTTCCCTGCCAGCCCGCATAGGAGGT...TAAAAATCTTGAGTTGATGATAACTGGAAGTCCACCTGGTACCTGCCTTCCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| 3UTR-3UTR TCA 90 bp | AATGACCCAATCCTTCCCGTGCCAGCGCCACTGTCTTACAAAAGCACCCAAACTTTCAATGAAGACAAATaGACAGGAAGGCAGGTACCA | + |
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Preference number: 2 (lower is better) Translates to: NDPILPVPAPLSYKSTQTFNEDK*TGRQVP Trigger: TGGTACCTGCCTTCCTGTTCATTTGTCTTCATTGAA...AGTTTGGGTGCTTTTGTAAGACAGTGGCGCTGGCACGGGAAGGATTGGGTCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| 3UTR-3UTR TCA 90 bp | GTTTTTACAAGTGTGCTTTATCTGGATGCTATCAGCACTGGTATCAGCACGAACGACCGGAAAAGCAAATaGCCCAATCCTTCCCGTGCC | + |
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Preference number: 2 (lower is better) Translates to: VFTSVLYLDAISTGISTNDRKSK*PNPSRA Trigger: GGCACGGGAAGGATTGGGTCATTTGCTTTTCCGGTC...GTTCGTGCTGATACCAGTGCTGATAGCATCCAGATAAAGCACACTTGTAAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174252.8 |
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| 3UTR-3UTR TCA 90 bp | ATGAACAGGAAGGCAGGTACCAGGTGGACTTCCAGTTATCATCAACTCAAGATTCAGCTTTCTCATGATTaGAACTGCAGTGACCGCCCA | + |
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Preference number: 2 (lower is better) Translates to: MNRKAGTRWTSSYHQLKIQLSHD*NCSDRP Trigger: TGGGCGGTCACTGCAGTTTCAATCATGAGAAAGCTG...AATCTTGAGTTGATGATAACTGGAAGTCCACCTGGTACCTGCCTTCCTGTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| 3UTR-3UTR GCA 90 bp | AATGACCCAATCCTTCCCGTGCCAGCGCCACTGTCTTACAAAAGCACCCAAACTGGAGAAAATCCTCCATaGTTTAAAAACTTCAACCTA | + |
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Preference number: 2 (lower is better) Translates to: NDPILPVPAPLSYKSTQTGENPP*FKNFNL Trigger: TAGGTTGAAGTTTTTAAAGCATGGAGGATTTTCTCC...AGTTTGGGTGCTTTTGTAAGACAGTGGCGCTGGCACGGGAAGGATTGGGTCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| 3UTR-3UTR TCA 90 bp | CACAGTTTTTACAAGTGTGCTTTATCTGGATGCTATCAGCACTGGTATCAGCACGCTCTTCCCTTTCAATaGAGACAAATGAACAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: HSFYKCALSGCYQHWYQHALPFQ*RQMNRK Trigger: CTTCCTGTTCATTTGTCTTCATTGAAAGGGAAGAGC...GTGCTGATACCAGTGCTGATAGCATCCAGATAAAGCACACTTGTAAAAACTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174252.8 |
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| 3UTR-3UTR TCA 90 bp | ATAATTCAGTTGTCCTTTCGCACTTTGAGACTAGTAAGGACTGGATCTTTAAAACAGCTTTCTCATGATTaGAACTGCAGTGACCGCCCA | + |
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Preference number: 2 (lower is better) Translates to: IIQLSFRTLRLVRTGSLKQLSHD*NCSDRP Trigger: TGGGCGGTCACTGCAGTTTCAATCATGAGAAAGCTG...TTTTAAAGATCCAGTCCTTACTAGTCTCAAAGTGCGAAAGGACAACTGAATTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| 3UTR-3UTR GCA 90 bp | TTAGTTTTTCGTTTCTTGAGTGACTTCTTTGCATTCTGCAGTCCTTTTGAAGTCAGTACACAGCTCTTCTaGGATACAACAGGGAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: LVFRFLSDFFAFCSPFEVSTQLF*DTTGKK Trigger: TTTCTTCCCTGTTGTATCGCAGAAGAGCTGTGTACT...GACTTCAAAAGGACTGCAGAATGCAAAGAAGTCACTCAAGAAACGAAAAACTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174252.8 |
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| 3UTR-3UTR GCA 90 bp | ATAATTCAGTTGTCCTTTCGCACTTTGAGACTAGTAAGGACTGGATCTTTAAAAGGAGAAAATCCTCCATaGTTTAAAAACTTCAACCTA | + |
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Preference number: 2 (lower is better) Translates to: IIQLSFRTLRLVRTGSLKGENPP*FKNFNL Trigger: TAGGTTGAAGTTTTTAAAGCATGGAGGATTTTCTCC...TTTTAAAGATCCAGTCCTTACTAGTCTCAAAGTGCGAAAGGACAACTGAATTAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| 3UTR GCA 72 bp | ATAAGACCGGAAAAGCAAATGACCCAATCCTTCCCGTaGCAGCGCCACTGTCTTACAAAAGCACCCAAACTA | + |
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Preference number: 3 (lower is better) Translates to: IRPEKQMTQSFP*QRHCLTKAPKL Trigger: TAGTTTGGGTGCTTTTGTAAGACAGTGGCGCTGGCACGGGAAGGATTGGGTCATTTGCTTTTCCGGTCTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| 3UTR TCA 72 bp | ACAGCATTGAGGCTCTTCCCTTTCAATGAAGACAAATaGACAGGAAGGCAGGTACCAGGTGGACTTCCAGTT | + |
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Preference number: 3 (lower is better) Translates to: TALRLFPFNEDK*TGRQVPGGLPV Trigger: AACTGGAAGTCCACCTGGTACCTGCCTTCCTGTTCATTTGTCTTCATTGAAAGGGAAGAGCCTCAATGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| 3UTR TCA 72 bp | CCGCTATACACTGATGAAAATCAGCTTTCTCATGATTaGAACTGCAGTGACCGCCCAAAAAGAAGCACACGA | + |
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Preference number: 3 (lower is better) Translates to: PLYTDENQLSHD*NCSDRPKRSTR Trigger: TCGTGTGCTTCTTTTTGGGCGGTCACTGCAGTTTCAATCATGAGAAAGCTGATTTTCATCAGTGTATAGCGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| 3UTR CCA 72 bp | ACTGCTGTCTCACAGTTTTTACAAGTGTGCTTTATCTaGATGCTATCAGCACTGGTATCAGCACGAACTGTA | + |
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Preference number: 3 (lower is better) Translates to: TAVSQFLQVCFI*MLSALVSARTV Trigger: TACAGTTCGTGCTGATACCAGTGCTGATAGCATCCAGATAAAGCACACTTGTAAAAACTGTGAGACAGCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174252.8 |
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| 3UTR GCA 72 bp | AGTCTGTCTTCTGTACAGATCAGTACACAGCTCTTCTaGGATACAACAGGGAAGAAAGTGAGCCTAAATATA | + |
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Preference number: 3 (lower is better) Translates to: SLSSVQISTQLF*DTTGKKVSLNI Trigger: TATATTTAGGCTCACTTTCTTCCCTGTTGTATCGCAGAAGAGCTGTGTACTGATCTGTACAGAAGACAGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174252.8 |
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| 3UTR GCA 72 bp | CTGTCTCACAGTTTTTACAAGTGTGCTTTATCTGGATaGTATCAGCACTGGTATCAGCACGAACTGTACTTT | + |
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Preference number: 3 (lower is better) Translates to: LSHSFYKCALSG*YQHWYQHELYF Trigger: AAAGTACAGTTCGTGCTGATACCAGTGCTGATAGCATCCAGATAAAGCACACTTGTAAAAACTGTGAGACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174252.8 |
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| 3UTR TCA 72 bp | AAGTTTGAACTGAAAGTCAAGTATGAAGGCAGTAGTTaGGAATACCATGTCAGAGTGCTCAGTCTGTCTTCT | + |
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Preference number: 3 (lower is better) Translates to: KFELKVKYEGSS*EYHVRVLSLSS Trigger: AGAAGACAGACTGAGCACTCTGACATGGTATTCTCAACTACTGCCTTCATACTTGACTTTCAGTTCAAACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174252.8 |
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| 3UTR-3UTR CAA 90 bp | GAACACAAAGTTTCTGGGACTTCTAGAAAAGAAACTGTAGTAGTAGTAACGAGCTTGGTACCCAATGGCTaGCTCATTTTTAGACTTTAC | + |
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Preference number: 3 (lower is better) Translates to: EHKVSGTSRKETVVVVTSLVPNG*LIFRLY Trigger: GTAAAGTCTAAAAATGAGCAAGCCATTGGGTACCAA...GCTCGTTACTACTACTACAGTTTCTTTTCTAGAAGTCCCAGAAACTTTGTGTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174252.8 |
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| CDS-3UTR TCA 90 bp | CCTATTAGGATCCACACACCTCCTATGCGGGCTGGCAGGGAAGCAGGTGCTCTCTGGCTGCGCTGCCCATaGCAGGAGAGCCTTGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: PIRIHTPPMRAGREAGALWLRCP*QESLEE Trigger: CTCCTCAAGGCTCTCCTGTCATGGGCAGCGCAGCCA...GAGAGCACCTGCTTCCCTGCCAGCCCGCATAGGAGGTGTGTGGATCCTAATAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| CDS-3UTR GCA 90 bp | CCTATTAGGATCCACACACCTCCTATGCGGGCTGGCAGGGAAGCAGGTGCTCTCCTGTGTGCCCATGGCTaGGCTGCCCATGACAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: PIRIHTPPMRAGREAGALLCAHG*AAHDRR Trigger: TCTCCTGTCATGGGCAGCGCAGCCATGGGCACACAG...GAGAGCACCTGCTTCCCTGCCAGCCCGCATAGGAGGTGTGTGGATCCTAATAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| CDS-3UTR CCA 90 bp | CCTATTAGGATCCACACACCTCCTATGCGGGCTGGCAGGGAAGCAGGTGCTCTCACCCATTGCCACCACTaGCAATGTGTCGACCAACAT | + |
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Preference number: 4 (lower is better) Translates to: PIRIHTPPMRAGREAGALTHCHH*QCVDQH Trigger: ATGTTGGTCGACACATTGCCAGTGGTGGCAATGGGT...GAGAGCACCTGCTTCCCTGCCAGCCCGCATAGGAGGTGTGTGGATCCTAATAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| CDS-3UTR GCA 90 bp | CCTATTAGGATCCACACACCTCCTATGCGGGCTGGCAGGGAAGCAGGTGCTCTCTTCAGCTTCTGTGCCTaGTCCTGTTCTTTCGCTAAT | + |
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Preference number: 4 (lower is better) Translates to: PIRIHTPPMRAGREAGALFSFCA*SCSFAN Trigger: ATTAGCGAAAGAACAGGAGCAGGCACAGAAGCTGAA...GAGAGCACCTGCTTCCCTGCCAGCCCGCATAGGAGGTGTGTGGATCCTAATAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| CDS-3UTR TCA 90 bp | CCTATTAGGATCCACACACCTCCTATGCGGGCTGGCAGGGAAGCAGGTGCTCTCATGAAGGAGCTGAACTaGTTGAGGTTGAGGTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: PIRIHTPPMRAGREAGALMKELN*LRLRLF Trigger: AAACAACCTCAACCTCAATCAGTTCAGCTCCTTCAT...GAGAGCACCTGCTTCCCTGCCAGCCCGCATAGGAGGTGTGTGGATCCTAATAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| CDS-3UTR CCA 90 bp | AATGACCCAATCCTTCCCGTGCCAGCGCCACTGTCTTACAAAAGCACCCAAACTCATAGTGGTGGGTGGTaGCTGTGCAAAGTTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: NDPILPVPAPLSYKSTQTHSGGW*LCKVLW Trigger: CCACAGAACTTTGCACAGCCACCACCCACCACTATG...AGTTTGGGTGCTTTTGTAAGACAGTGGCGCTGGCACGGGAAGGATTGGGTCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| CDS-3UTR TCA 90 bp | AATGACCCAATCCTTCCCGTGCCAGCGCCACTGTCTTACAAAAGCACCCAAACTCAAAGGGCTAAAGTTTaGCATAGTGGGAGGTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: NDPILPVPAPLSYKSTQTQRAKV*HSGRCS Trigger: GGAGCACCTCCCACTATGTCAAACTTTAGCCCTTTG...AGTTTGGGTGCTTTTGTAAGACAGTGGCGCTGGCACGGGAAGGATTGGGTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| CDS-3UTR TCA 90 bp | ACAGGAAGGCAGGTACCAGGTGGACTTCCAGTTATCATCAACTCAAGATTTTTATGGCTGCGCTGCCCATaGCAGGAGAGCCTTGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: TGRQVPGGLPVIINSRFLWLRCP*QESLEE Trigger: CTCCTCAAGGCTCTCCTGTCATGGGCAGCGCAGCCA...TAAAAATCTTGAGTTGATGATAACTGGAAGTCCACCTGGTACCTGCCTTCCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| CDS-3UTR CCA 90 bp | CCATCTCCCACAGAAGCAGTTTCTTCAAGCCCGCTATACACTGATGAAAATCAGATGGGAGTGTGGACCTaGGGCTTAAGAGGCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: PSPTEAVSSSPLYTDENQMGVWT*GLRGCW Trigger: CCAGCAGCCTCTTAAGCCCCAGGTCCACACTCCCAT...CTGATTTTCATCAGTGTATAGCGGGCTTGAAGAAACTGCTTCTGTGGGAGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| CDS-3UTR CCA 90 bp | AACAATCCATCTCCCACAGAAGCAGTTTCTTCAAGCCCGCTATACACTGATGAAGGAGCGATGGGAGTGTaGACCTGGGGCTTAAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: NNPSPTEAVSSSPLYTDEGAMGV*TWGLRG Trigger: GCCTCTTAAGCCCCAGGTCCACACTCCCATCGCTCC...TTCATCAGTGTATAGCGGGCTTGAAGAAACTGCTTCTGTGGGAGATGGATTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| CDS-3UTR TCA 90 bp | CACAGAAACAATCCATCTCCCACAGAAGCAGTTTCTTCAAGCCCGCTATACACTCAGAGCTCCTGGATCTaGATGGAAGGAGCCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: HRNNPSPTEAVSSSPLYTQSSWI*MEGASR Trigger: TCTGGAGGCTCCTTCCATTCAGATCCAGGAGCTCTG...AGTGTATAGCGGGCTTGAAGAAACTGCTTCTGTGGGAGATGGATTGTTTCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| CDS-3UTR TCA 90 bp | ACAGGAAGGCAGGTACCAGGTGGACTTCCAGTTATCATCAACTCAAGATTTTTACTCAGGGGGATGAGATaGGGCAGGACTTTCCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: TGRQVPGGLPVIINSRFLLRGMR*GRTFPA Trigger: GGCTGGGAAAGTCCTGCCTCATCTCATCCCCCTGAG...TAAAAATCTTGAGTTGATGATAACTGGAAGTCCACCTGGTACCTGCCTTCCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| CDS-3UTR GCA 90 bp | AATGACCCAATCCTTCCCGTGCCAGCGCCACTGTCTTACAAAAGCACCCAAACTATCTGGATTGGCTCCTaGTGTTTGAATACAGGACCG | + |
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Preference number: 4 (lower is better) Translates to: NDPILPVPAPLSYKSTQTIWIGS*CLNTGP Trigger: CGGTCCTGTATTCAAACAGCAGGAGCCAATCCAGAT...AGTTTGGGTGCTTTTGTAAGACAGTGGCGCTGGCACGGGAAGGATTGGGTCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| CDS-3UTR CCA 90 bp | CCATCTCCCACAGAAGCAGTTTCTTCAAGCCCGCTATACACTGATGAAAATCAGGCTCCTGGATCTGAATaGAAGGAGCCTCCAGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: PSPTEAVSSSPLYTDENQAPGSE*KEPPEL Trigger: GAGCTCTGGAGGCTCCTTCCATTCAGATCCAGGAGC...CTGATTTTCATCAGTGTATAGCGGGCTTGAAGAAACTGCTTCTGTGGGAGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| CDS-3UTR CCA 90 bp | ATGAACAGGAAGGCAGGTACCAGGTGGACTTCCAGTTATCATCAACTCAAGATTATGGGAGTGTGGACCTaGGGCTTAAGAGGCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: MNRKAGTRWTSSYHQLKIMGVWT*GLRGCW Trigger: CCAGCAGCCTCTTAAGCCCCAGGTCCACACTCCCAT...AATCTTGAGTTGATGATAACTGGAAGTCCACCTGGTACCTGCCTTCCTGTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| CDS-3UTR CCA 90 bp | ACAGGAAGGCAGGTACCAGGTGGACTTCCAGTTATCATCAACTCAAGATTTTTAGGAGCGATGGGAGTGTaGACCTGGGGCTTAAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: TGRQVPGGLPVIINSRFLGAMGV*TWGLRG Trigger: GCCTCTTAAGCCCCAGGTCCACACTCCCATCGCTCC...TAAAAATCTTGAGTTGATGATAACTGGAAGTCCACCTGGTACCTGCCTTCCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| CDS-3UTR TCA 90 bp | CACAGAAACAATCCATCTCCCACAGAAGCAGTTTCTTCAAGCCCGCTATACACTTACCTAAAATCCCCATaGGGACTGCAGGCTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: HRNNPSPTEAVSSSPLYTYLKSP*GLQAPW Trigger: CCAAGGAGCCTGCAGTCCTCATGGGGATTTTAGGTA...AGTGTATAGCGGGCTTGAAGAAACTGCTTCTGTGGGAGATGGATTGTTTCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| CDS-3UTR TCA 90 bp | ATGAACAGGAAGGCAGGTACCAGGTGGACTTCCAGTTATCATCAACTCAAGATTCAATGCTCAGGGGGATaGGATGAGGCAGGACTTTCC | + |
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Preference number: 4 (lower is better) Translates to: MNRKAGTRWTSSYHQLKIQCSGG*DEAGLS Trigger: GGAAAGTCCTGCCTCATCTCATCCCCCTGAGCATTG...AATCTTGAGTTGATGATAACTGGAAGTCCACCTGGTACCTGCCTTCCTGTTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| CDS-3UTR CCA 90 bp | CACAGAAACAATCCATCTCCCACAGAAGCAGTTTCTTCAAGCCCGCTATACACTACGAGTACATGTCACTaGCAGTCTCACAGCTCACGG | + |
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Preference number: 4 (lower is better) Translates to: HRNNPSPTEAVSSSPLYTTSTCH*QSHSSR Trigger: CCGTGAGCTGTGAGACTGCCAGTGACATGTACTCGT...AGTGTATAGCGGGCTTGAAGAAACTGCTTCTGTGGGAGATGGATTGTTTCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| CDS-3UTR CCA 90 bp | CCATCTCCCACAGAAGCAGTTTCTTCAAGCCCGCTATACACTGATGAAAATCAGGGACTGCAGGCTCCTTaGAGGGAATCTGCTGTAAGA | + |
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Preference number: 4 (lower is better) Translates to: PSPTEAVSSSPLYTDENQGLQAP*RESAVR Trigger: TCTTACAGCAGATTCCCTCCAAGGAGCCTGCAGTCC...CTGATTTTCATCAGTGTATAGCGGGCTTGAAGAAACTGCTTCTGTGGGAGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| CDS-3UTR TCA 90 bp | AACAATCCATCTCCCACAGAAGCAGTTTCTTCAAGCCCGCTATACACTGATGAATACCTAAAATCCCCATaGGGACTGCAGGCTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: NNPSPTEAVSSSPLYTDEYLKSP*GLQAPW Trigger: CCAAGGAGCCTGCAGTCCTCATGGGGATTTTAGGTA...TTCATCAGTGTATAGCGGGCTTGAAGAAACTGCTTCTGTGGGAGATGGATTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| CDS-3UTR TCA 90 bp | ATCTGGATGCTATCAGCACTGGTATCAGCACGAACTGTACTTTGTAATCAAGTCCAATGCTCAGGGGGATaGGATGAGGCAGGACTTTCC | + |
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Preference number: 4 (lower is better) Translates to: IWMLSALVSARTVLCNQVQCSGG*DEAGLS Trigger: GGAAAGTCCTGCCTCATCTCATCCCCCTGAGCATTG...GACTTGATTACAAAGTACAGTTCGTGCTGATACCAGTGCTGATAGCATCCAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174252.8 |
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| CDS-3UTR TCA 90 bp | AATGACCCAATCCTTCCCGTGCCAGCGCCACTGTCTTACAAAAGCACCCAAACTATGAAGGAGCTGAACTaGTTGAGGTTGAGGTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: NDPILPVPAPLSYKSTQTMKELN*LRLRLF Trigger: AAACAACCTCAACCTCAATCAGTTCAGCTCCTTCAT...AGTTTGGGTGCTTTTGTAAGACAGTGGCGCTGGCACGGGAAGGATTGGGTCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| CDS-3UTR CCA 90 bp | ATGAACAGGAAGGCAGGTACCAGGTGGACTTCCAGTTATCATCAACTCAAGATTCATAGTGGTGGGTGGTaGCTGTGCAAAGTTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: MNRKAGTRWTSSYHQLKIHSGGW*LCKVLW Trigger: CCACAGAACTTTGCACAGCCACCACCCACCACTATG...AATCTTGAGTTGATGATAACTGGAAGTCCACCTGGTACCTGCCTTCCTGTTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR CCA 90 bp | ATGAACAGGAAGGCAGGTACCAGGTGGACTTCCAGTTATCATCAACTCAAGATTGGTCATAGTGGTGGGTaGTGGCTGTGCAAAGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MNRKAGTRWTSSYHQLKIGHSGG*WLCKVL Trigger: CAGAACTTTGCACAGCCACCACCCACCACTATGACC...AATCTTGAGTTGATGATAACTGGAAGTCCACCTGGTACCTGCCTTCCTGTTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR TCA 90 bp | AACAATCCATCTCCCACAGAAGCAGTTTCTTCAAGCCCGCTATACACTGATGAACTGAACCCTGAAGTCTaGAAGCCCATGTTGGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: NNPSPTEAVSSSPLYTDELNPEV*KPMLAF Trigger: GAATGCCAACATGGGCTTTCAGACTTCAGGGTTCAG...TTCATCAGTGTATAGCGGGCTTGAAGAAACTGCTTCTGTGGGAGATGGATTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR GCA 90 bp | AACAATCCATCTCCCACAGAAGCAGTTTCTTCAAGCCCGCTATACACTGATGAACAGGGTAAAATCCTCTaGACAATGACACGCTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NNPSPTEAVSSSPLYTDEQGKIL*TMTRLG Trigger: GCCCAAGCGTGTCATTGTGCAGAGGATTTTACCCTG...TTCATCAGTGTATAGCGGGCTTGAAGAAACTGCTTCTGTGGGAGATGGATTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR GCA 90 bp | CCATCTCCCACAGAAGCAGTTTCTTCAAGCCCGCTATACACTGATGAAAATCAGATCTGGATTGGCTCCTaGTGTTTGAATACAGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: PSPTEAVSSSPLYTDENQIWIGS*CLNTGP Trigger: CGGTCCTGTATTCAAACAGCAGGAGCCAATCCAGAT...CTGATTTTCATCAGTGTATAGCGGGCTTGAAGAAACTGCTTCTGTGGGAGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR CCA 90 bp | AACAATCCATCTCCCACAGAAGCAGTTTCTTCAAGCCCGCTATACACTGATGAAACCCATTGCCACCACTaGCAATGTGTCGACCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: NNPSPTEAVSSSPLYTDETHCHH*QCVDQH Trigger: ATGTTGGTCGACACATTGCCAGTGGTGGCAATGGGT...TTCATCAGTGTATAGCGGGCTTGAAGAAACTGCTTCTGTGGGAGATGGATTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR CCA 90 bp | ATGAACAGGAAGGCAGGTACCAGGTGGACTTCCAGTTATCATCAACTCAAGATTGGCAGACATATCGGTTaGTCTCTGTTGAGGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: MNRKAGTRWTSSYHQLKIGRHIG*SLLRLL Trigger: AAGCAGCCTCAACAGAGACCAACCGATATGTCTGCC...AATCTTGAGTTGATGATAACTGGAAGTCCACCTGGTACCTGCCTTCCTGTTCAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR TCA 90 bp | GAACACAAAGTTTCTGGGACTTCTAGAAAAGAAACTGTAGTAGTAGTAACGAGCCAGAGCTCCTGGATCTaGATGGAAGGAGCCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EHKVSGTSRKETVVVVTSQSSWI*MEGASR Trigger: TCTGGAGGCTCCTTCCATTCAGATCCAGGAGCTCTG...GCTCGTTACTACTACTACAGTTTCTTTTCTAGAAGTCCCAGAAACTTTGTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174252.8 |
||
| CDS-3UTR TCA 90 bp | CCATCTCCCACAGAAGCAGTTTCTTCAAGCCCGCTATACACTGATGAAAATCAGTGGGGTGAAGGTACTTaGAGCAGAAATCTTAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSPTEAVSSSPLYTDENQWGEGT*SRNLRS Trigger: ACTCCTAAGATTTCTGCTTCAAGTACCTTCACCCCA...CTGATTTTCATCAGTGTATAGCGGGCTTGAAGAAACTGCTTCTGTGGGAGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGAAGGCAGGTACCAGGTGGACTTCCAGTTATCATCAACTCAAGATTTTTACAGGGTAAAATCCTCTaGACAATGACACGCTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TGRQVPGGLPVIINSRFLQGKIL*TMTRLG Trigger: GCCCAAGCGTGTCATTGTGCAGAGGATTTTACCCTG...TAAAAATCTTGAGTTGATGATAACTGGAAGTCCACCTGGTACCTGCCTTCCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR GCA 90 bp | ATAATTCAGTTGTCCTTTCGCACTTTGAGACTAGTAAGGACTGGATCTTTAAAACTGTGTGCCCATGGCTaGGCTGCCCATGACAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IIQLSFRTLRLVRTGSLKLCAHG*AAHDRR Trigger: TCTCCTGTCATGGGCAGCGCAGCCATGGGCACACAG...TTTTAAAGATCCAGTCCTTACTAGTCTCAAAGTGCGAAAGGACAACTGAATTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGAAGGCAGGTACCAGGTGGACTTCCAGTTATCATCAACTCAAGATTTTTAGGCAGACATATCGGTTaGTCTCTGTTGAGGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGRQVPGGLPVIINSRFLGRHIG*SLLRLL Trigger: AAGCAGCCTCAACAGAGACCAACCGATATGTCTGCC...TAAAAATCTTGAGTTGATGATAACTGGAAGTCCACCTGGTACCTGCCTTCCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR TCA 90 bp | ATGAACAGGAAGGCAGGTACCAGGTGGACTTCCAGTTATCATCAACTCAAGATTATTATCAATGGGTGTTaGAAACATCATGCCGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: MNRKAGTRWTSSYHQLKIIINGC*KHHAEA Trigger: GGCCTCGGCATGATGTTTTCAACACCCATTGATAAT...AATCTTGAGTTGATGATAACTGGAAGTCCACCTGGTACCTGCCTTCCTGTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR GCA 90 bp | AACAATCCATCTCCCACAGAAGCAGTTTCTTCAAGCCCGCTATACACTGATGAATTCAGCTTCTGTGCCTaGTCCTGTTCTTTCGCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: NNPSPTEAVSSSPLYTDEFSFCA*SCSFAN Trigger: ATTAGCGAAAGAACAGGAGCAGGCACAGAAGCTGAA...TTCATCAGTGTATAGCGGGCTTGAAGAAACTGCTTCTGTGGGAGATGGATTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR CCA 90 bp | ATGAACAGGAAGGCAGGTACCAGGTGGACTTCCAGTTATCATCAACTCAAGATTCCACTGAAGAAGTTCTaGTTTGGATTGACTGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: MNRKAGTRWTSSYHQLKIPLKKF*FGLTGM Trigger: CATGCCAGTCAATCCAAACCAGAACTTCTTCAGTGG...AATCTTGAGTTGATGATAACTGGAAGTCCACCTGGTACCTGCCTTCCTGTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR TCA 90 bp | ATCTGGATGCTATCAGCACTGGTATCAGCACGAACTGTACTTTGTAATCAAGTCATTATCAATGGGTGTTaGAAACATCATGCCGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IWMLSALVSARTVLCNQVIINGC*KHHAEA Trigger: GGCCTCGGCATGATGTTTTCAACACCCATTGATAAT...GACTTGATTACAAAGTACAGTTCGTGCTGATACCAGTGCTGATAGCATCCAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174252.8 |
||
| CDS-3UTR GCA 90 bp | AACAATCCATCTCCCACAGAAGCAGTTTCTTCAAGCCCGCTATACACTGATGAATATTTTCTGATTCACTaGCACTTAGAAGGTCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NNPSPTEAVSSSPLYTDEYFLIH*HLEGPL Trigger: GAGCGGACCTTCTAAGTGGCAGTGAATCAGAAAATA...TTCATCAGTGTATAGCGGGCTTGAAGAAACTGCTTCTGTGGGAGATGGATTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR CCA 90 bp | GTTTTTACAAGTGTGCTTTATCTGGATGCTATCAGCACTGGTATCAGCACGAACCCACTGAAGAAGTTCTaGTTTGGATTGACTGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: VFTSVLYLDAISTGISTNPLKKF*FGLTGM Trigger: CATGCCAGTCAATCCAAACCAGAACTTCTTCAGTGG...GTTCGTGCTGATACCAGTGCTGATAGCATCCAGATAAAGCACACTTGTAAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174252.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGAAGGCAGGTACCAGGTGGACTTCCAGTTATCATCAACTCAAGATTTTTATCAGAAGTGCTCATTTaGTTCCCTATGTCCAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TGRQVPGGLPVIINSRFLSEVLI*FPMSKD Trigger: GTCTTTGGACATAGGGAATCAAATGAGCACTTCTGA...TAAAAATCTTGAGTTGATGATAACTGGAAGTCCACCTGGTACCTGCCTTCCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR TCA 90 bp | GTTTTTACAAGTGTGCTTTATCTGGATGCTATCAGCACTGGTATCAGCACGAACTCAGAAGTGCTCATTTaGTTCCCTATGTCCAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VFTSVLYLDAISTGISTNSEVLI*FPMSKD Trigger: GTCTTTGGACATAGGGAATCAAATGAGCACTTCTGA...GTTCGTGCTGATACCAGTGCTGATAGCATCCAGATAAAGCACACTTGTAAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174252.8 |
||
| CDS-3UTR GCA 90 bp | CACAGAAACAATCCATCTCCCACAGAAGCAGTTTCTTCAAGCCCGCTATACACTCTTTTCTGTTTTCCCTaGATCCCATCTTCTCTATTT | + |
|
Preference number: 4 (lower is better) Translates to: HRNNPSPTEAVSSSPLYTLFCFP*IPSSLF Trigger: AAATAGAGAAGATGGGATGCAGGGAAAACAGAAAAG...AGTGTATAGCGGGCTTGAAGAAACTGCTTCTGTGGGAGATGGATTGTTTCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR CCA 90 bp | ATAATTCAGTTGTCCTTTCGCACTTTGAGACTAGTAAGGACTGGATCTTTAAAAACGAGTACATGTCACTaGCAGTCTCACAGCTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: IIQLSFRTLRLVRTGSLKTSTCH*QSHSSR Trigger: CCGTGAGCTGTGAGACTGCCAGTGACATGTACTCGT...TTTTAAAGATCCAGTCCTTACTAGTCTCAAAGTGCGAAAGGACAACTGAATTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR CCA 90 bp | ATAATTCAGTTGTCCTTTCGCACTTTGAGACTAGTAAGGACTGGATCTTTAAAAGGACTGCAGGCTCCTTaGAGGGAATCTGCTGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: IIQLSFRTLRLVRTGSLKGLQAP*RESAVR Trigger: TCTTACAGCAGATTCCCTCCAAGGAGCCTGCAGTCC...TTTTAAAGATCCAGTCCTTACTAGTCTCAAAGTGCGAAAGGACAACTGAATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR CCA 90 bp | ATAATTCAGTTGTCCTTTCGCACTTTGAGACTAGTAAGGACTGGATCTTTAAAAGGTCATAGTGGTGGGTaGTGGCTGTGCAAAGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IIQLSFRTLRLVRTGSLKGHSGG*WLCKVL Trigger: CAGAACTTTGCACAGCCACCACCCACCACTATGACC...TTTTAAAGATCCAGTCCTTACTAGTCTCAAAGTGCGAAAGGACAACTGAATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR TCA 90 bp | ATAATTCAGTTGTCCTTTCGCACTTTGAGACTAGTAAGGACTGGATCTTTAAAACTGAACCCTGAAGTCTaGAAGCCCATGTTGGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: IIQLSFRTLRLVRTGSLKLNPEV*KPMLAF Trigger: GAATGCCAACATGGGCTTTCAGACTTCAGGGTTCAG...TTTTAAAGATCCAGTCCTTACTAGTCTCAAAGTGCGAAAGGACAACTGAATTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR TCA 90 bp | TTAGTTTTTCGTTTCTTGAGTGACTTCTTTGCATTCTGCAGTCCTTTTGAAGTCTGGGGTGAAGGTACTTaGAGCAGAAATCTTAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LVFRFLSDFFAFCSPFEVWGEGT*SRNLRS Trigger: ACTCCTAAGATTTCTGCTTCAAGTACCTTCACCCCA...GACTTCAAAAGGACTGCAGAATGCAAAGAAGTCACTCAAGAAACGAAAAACTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000174252.8 |
||
| CDS-3UTR GCA 90 bp | GAACACAAAGTTTCTGGGACTTCTAGAAAAGAAACTGTAGTAGTAGTAACGAGCCTTTTCTGTTTTCCCTaGATCCCATCTTCTCTATTT | + |
|
Preference number: 4 (lower is better) Translates to: EHKVSGTSRKETVVVVTSLFCFP*IPSSLF Trigger: AAATAGAGAAGATGGGATGCAGGGAAAACAGAAAAG...GCTCGTTACTACTACTACAGTTTCTTTTCTAGAAGTCCCAGAAACTTTGTGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174252.8 |
||
| CDS-3UTR CAA 90 bp | CCTATTAGGATCCACACACCTCCTATGCGGGCTGGCAGGGAAGCAGGTGCTCTCCACGCTTGGGCAGCTTaGGTAGAACCTTTGGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: PIRIHTPPMRAGREAGALHAWAA*VEPLAI Trigger: GATTGCCAAAGGTTCTACCAAAGCTGCCCAAGCGTG...GAGAGCACCTGCTTCCCTGCCAGCCCGCATAGGAGGTGTGTGGATCCTAATAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR CAA 90 bp | CCTATTAGGATCCACACACCTCCTATGCGGGCTGGCAGGGAAGCAGGTGCTCTCCATGACAGGAGAGCCTaGAGGAGGTGCAAACTGATT | + |
|
Preference number: 5 (lower is better) Translates to: PIRIHTPPMRAGREAGALHDRRA*RRCKLI Trigger: AATCAGTTTGCACCTCCTCAAGGCTCTCCTGTCATG...GAGAGCACCTGCTTCCCTGCCAGCCCGCATAGGAGGTGTGTGGATCCTAATAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR CAA 90 bp | CCTATTAGGATCCACACACCTCCTATGCGGGCTGGCAGGGAAGCAGGTGCTCTCAAGTTCTGGTTTGGATaGACTGGCATGCTGAACCCT | + |
|
Preference number: 5 (lower is better) Translates to: PIRIHTPPMRAGREAGALKFWFG*TGMLNP Trigger: AGGGTTCAGCATGCCAGTCAATCCAAACCAGAACTT...GAGAGCACCTGCTTCCCTGCCAGCCCGCATAGGAGGTGTGTGGATCCTAATAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR CAA 90 bp | AATGACCCAATCCTTCCCGTGCCAGCGCCACTGTCTTACAAAAGCACCCAAACTCAGAATGTGCAACTTTaGTCTCCTCAGAAGTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NDPILPVPAPLSYKSTQTQNVQL*SPQKCS Trigger: TGAGCACTTCTGAGGAGACAAAAGTTGCACATTCTG...AGTTTGGGTGCTTTTGTAAGACAGTGGCGCTGGCACGGGAAGGATTGGGTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR CAA 90 bp | AATGACCCAATCCTTCCCGTGCCAGCGCCACTGTCTTACAAAAGCACCCAAACTCTCAGAAGTGCTCATTaGATTCCCTATGTCCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: NDPILPVPAPLSYKSTQTLRSAH*IPYVQR Trigger: TCTTTGGACATAGGGAATCAAATGAGCACTTCTGAG...AGTTTGGGTGCTTTTGTAAGACAGTGGCGCTGGCACGGGAAGGATTGGGTCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR CAA 90 bp | CACAGTTTTTACAAGTGTGCTTTATCTGGATGCTATCAGCACTGGTATCAGCACCACGCTTGGGCAGCTTaGGTAGAACCTTTGGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: HSFYKCALSGCYQHWYQHHAWAA*VEPLAI Trigger: GATTGCCAAAGGTTCTACCAAAGCTGCCCAAGCGTG...GTGCTGATACCAGTGCTGATAGCATCCAGATAAAGCACACTTGTAAAAACTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174252.8 |
||
| CDS-3UTR CAA 90 bp | CACAGAAACAATCCATCTCCCACAGAAGCAGTTTCTTCAAGCCCGCTATACACTAAGTTCTGGTTTGGATaGACTGGCATGCTGAACCCT | + |
|
Preference number: 5 (lower is better) Translates to: HRNNPSPTEAVSSSPLYTKFWFG*TGMLNP Trigger: AGGGTTCAGCATGCCAGTCAATCCAAACCAGAACTT...AGTGTATAGCGGGCTTGAAGAAACTGCTTCTGTGGGAGATGGATTGTTTCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR CAA 90 bp | AACAATCCATCTCCCACAGAAGCAGTTTCTTCAAGCCCGCTATACACTGATGAACATGACAGGAGAGCCTaGAGGAGGTGCAAACTGATT | + |
|
Preference number: 5 (lower is better) Translates to: NNPSPTEAVSSSPLYTDEHDRRA*RRCKLI Trigger: AATCAGTTTGCACCTCCTCAAGGCTCTCCTGTCATG...TTCATCAGTGTATAGCGGGCTTGAAGAAACTGCTTCTGTGGGAGATGGATTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR CAA 90 bp | CACAGAAACAATCCATCTCCCACAGAAGCAGTTTCTTCAAGCCCGCTATACACTGTTCAGAAGGGTTGCTaGATGACACACAGAAGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: HRNNPSPTEAVSSSPLYTVQKGC*MTHRSQ Trigger: TTGACTTCTGTGTGTCATCAAGCAACCCTTCTGAAC...AGTGTATAGCGGGCTTGAAGAAACTGCTTCTGTGGGAGATGGATTGTTTCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR CAA 90 bp | ATGAACAGGAAGGCAGGTACCAGGTGGACTTCCAGTTATCATCAACTCAAGATTCAGAATGTGCAACTTTaGTCTCCTCAGAAGTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: MNRKAGTRWTSSYHQLKIQNVQL*SPQKCS Trigger: TGAGCACTTCTGAGGAGACAAAAGTTGCACATTCTG...AATCTTGAGTTGATGATAACTGGAAGTCCACCTGGTACCTGCCTTCCTGTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR CAA 90 bp | CACAGTTTTTACAAGTGTGCTTTATCTGGATGCTATCAGCACTGGTATCAGCACATGCCAAGCAATCCCTaGACTCTTCTAAAGGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: HSFYKCALSGCYQHWYQHMPSNP*TLLKDA Trigger: AGCATCCTTTAGAAGAGTCAAGGGATTGCTTGGCAT...GTGCTGATACCAGTGCTGATAGCATCCAGATAAAGCACACTTGTAAAAACTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174252.8 |
||
| CDS-3UTR CAA 90 bp | CACAGTTTTTACAAGTGTGCTTTATCTGGATGCTATCAGCACTGGTATCAGCACGTTCAGAAGGGTTGCTaGATGACACACAGAAGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: HSFYKCALSGCYQHWYQHVQKGC*MTHRSQ Trigger: TTGACTTCTGTGTGTCATCAAGCAACCCTTCTGAAC...GTGCTGATACCAGTGCTGATAGCATCCAGATAAAGCACACTTGTAAAAACTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174252.8 |
||
| CDS-3UTR CAA 90 bp | ATGAACAGGAAGGCAGGTACCAGGTGGACTTCCAGTTATCATCAACTCAAGATTACTCAACTGATCCAGTaGTCTACTGAAGCTCTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: MNRKAGTRWTSSYHQLKITQLIQ*STEALV Trigger: TACAAGAGCTTCAGTAGACAACTGGATCAGTTGAGT...AATCTTGAGTTGATGATAACTGGAAGTCCACCTGGTACCTGCCTTCCTGTTCAT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR CAA 90 bp | ACTGCTATTCAGGATAATTCAGTTGTCCTTTCGCACTTTGAGACTAGTAAGGACATGCCAAGCAATCCCTaGACTCTTCTAAAGGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: TAIQDNSVVLSHFETSKDMPSNP*TLLKDA Trigger: AGCATCCTTTAGAAGAGTCAAGGGATTGCTTGGCAT...GTCCTTACTAGTCTCAAAGTGCGAAAGGACAACTGAATTATCCTGAATAGCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGAAGGCAGGTACCAGGTGGACTTCCAGTTATCATCAACTCAAGATTTTTAACTCAACTGATCCAGTaGTCTACTGAAGCTCTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: TGRQVPGGLPVIINSRFLTQLIQ*STEALV Trigger: TACAAGAGCTTCAGTAGACAACTGGATCAGTTGAGT...TAAAAATCTTGAGTTGATGATAACTGGAAGTCCACCTGGTACCTGCCTTCCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR CAA 90 bp | ACTGCTATTCAGGATAATTCAGTTGTCCTTTCGCACTTTGAGACTAGTAAGGACAAATATAGGTCTCCCTaGATTAAACACGGCGTACAT | + |
|
Preference number: 5 (lower is better) Translates to: TAIQDNSVVLSHFETSKDKYRSP*IKHGVH Trigger: ATGTACGCCGTGTTTAATCAAGGGAGACCTATATTT...GTCCTTACTAGTCTCAAAGTGCGAAAGGACAACTGAATTATCCTGAATAGCAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
||
| CDS-3UTR CAA 90 bp | ATAATTCAGTTGTCCTTTCGCACTTTGAGACTAGTAAGGACTGGATCTTTAAAACTCAGAAGTGCTCATTaGATTCCCTATGTCCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: IIQLSFRTLRLVRTGSLKLRSAH*IPYVQR Trigger: TCTTTGGACATAGGGAATCAAATGAGCACTTCTGAG...TTTTAAAGATCCAGTCCTTACTAGTCTCAAAGTGCGAAAGGACAACTGAATTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| CDS TCA 72 bp | CCTATGTCCAAAGACCTCTGCTGCTCCTGCATCACGTaGAGCTGCTCTAGCTTCGTCCTATGCTCAGACTCC | + |
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Preference number: 6 (lower is better) Translates to: PMSKDLCCSCIT*SCSSFVLCSDS Trigger: GGAGTCTGAGCATAGGACGAAGCTAGAGCAGCTTCACGTGATGCAGGAGCAGCAGAGGTCTTTGGACATAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| CDS TCA 72 bp | AGCATCTCCTTTATGACGGCAATGAAGGAGCTGAACTaGTTGAGGTTGAGGTTGTTTTCAATGCTCAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: SISFMTAMKELN*LRLRLFSMLRG Trigger: CCCCCTGAGCATTGAAAACAACCTCAACCTCAATCAGTTCAGCTCCTTCATTGCCGTCATAAAGGAGATGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092227.12 ENSMUST00000174252.8 |
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| CDS GCA 72 bp | GTTAAAGACCTTATCAATCTGCTGACTTCCAGAATGTaGAACTTTTGTCTCCTCAGAAGTGCTCATTTGATT | + |
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Preference number: 6 (lower is better) Translates to: VKDLINLLTSRM*NFCLLRSAHLI Trigger: AATCAAATGAGCACTTCTGAGGAGACAAAAGTTGCACATTCTGGAAGTCAGCAGATTGATAAGGTCTTTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174252.8 |
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| CDS GCA 72 bp | GTTGTTAAAGACCTTATCAATCTGACTTCCAGAATGTaGAACTTTTGTCTCCTCAGAAGTGCTCATTTGATT | + |
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Preference number: 6 (lower is better) Translates to: VVKDLINLTSRM*NFCLLRSAHLI Trigger: AATCAAATGAGCACTTCTGAGGAGACAAAAGTTGCACATTCTGGAAGTCAGATTGATAAGGTCTTTAACAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092227.12 |
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