Pregenerated sensors for SCTR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026387Ensembl transcript IDs: ENSMUST00000072886.11, ENSMUST00000189037.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAATCCCAGGCCTGTTTCCTGCTCCAGGATGACCTAGTCTCCTCTTaGTTGATCTCTGAGGAAGCTCAGACCTCGGGGACAGGCCTGTGC | + |
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Preference number: 1 (lower is better) Translates to: KSQACFLLQDDLVSS*LISEEAQTSGTGLC Trigger: GCACAGGCCTGTCCCCGAGGTCTGAGCTTCCTCAGAGATCAAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAAACAGGCCTGGGATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| 3UTR CAA 90 bp | TCCCAGGCCTGTTTCCTGCTCCAGGATGACCTAGTCTCCTCTTGCTaGATCTCTGAGGAAGCTCAGACCTCGGGGACAGGCCTGTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: SQACFLLQDDLVSSC*ISEEAQTSGTGLCS Trigger: GCTGCACAGGCCTGTCCCCGAGGTCTGAGCTTCCTCAGAGATCAAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAAACAGGCCTGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTCTGGGGCCGCTGAAGTGCTCTTCTTAGAAGAACTAGAAAGACCAAATCCCTTTCCTGCTCCAGGATaGCCTAGTCTCCTCTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: PSGAAEVLFLEELERPNPFPAPG*PSLLLL Trigger: AAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAAA...GGGATTTGGTCTTTCTAGTTCTTCTAAGAAGAGCACTTCAGCGGCCCCAGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| 3UTR GCA 72 bp | GCCTGTTTCCTGCTCCAGGATGACCTAGTCTCCTCTTaGTTGATCTCTGAGGAAGCTCAGACCTCGGGGACA | + |
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Preference number: 3 (lower is better) Translates to: ACFLLQDDLVSS*LISEEAQTSGT Trigger: TGTCCCCGAGGTCTGAGCTTCCTCAGAGATCAAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAAACAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR CCA 90 bp | GACCTAGTCTCCTCTTGCTTGATCTCTGAGGAAGCTCAGACCTCGGGGACAGGCCCTTGGTGCTGTGGGTaGGGCCGTTGGTGGCGTTGC | + |
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Preference number: 4 (lower is better) Translates to: DLVSSCLISEEAQTSGTGPWCCG*GRWWRC Trigger: GCAACGCCACCAACGGCCCCACCCACAGCACCAAGG...GCCTGTCCCCGAGGTCTGAGCTTCCTCAGAGATCAAGCAAGAGGAGACTAGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR CCA 90 bp | CTAGTCTCCTCTTGCTTGATCTCTGAGGAAGCTCAGACCTCGGGGACAGGCCTGCAGAGGTGCCAGCCTTaGTGCTGTGGGTGGGGCCGT | + |
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Preference number: 4 (lower is better) Translates to: LVSSCLISEEAQTSGTGLQRCQP*CCGWGR Trigger: ACGGCCCCACCCACAGCACCAAGGCTGGCACCTCTG...CAGGCCTGTCCCCGAGGTCTGAGCTTCCTCAGAGATCAAGCAAGAGGAGACTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR GCA 90 bp | CAGGCCTGTTTCCTGCTCCAGGATGACCTAGTCTCCTCTTGCTTGATCTCTGAGAGGTGCCAGCCTTGGTaGTGTGGGTGGGGCCGTTGG | + |
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Preference number: 4 (lower is better) Translates to: QACFLLQDDLVSSCLISERCQPW*CGWGRW Trigger: CCAACGGCCCCACCCACAGCACCAAGGCTGGCACCT...CTCAGAGATCAAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAAACAGGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR CCA 90 bp | CTAGTCTCCTCTTGCTTGATCTCTGAGGAAGCTCAGACCTCGGGGACAGGCCTGGGGCGACCAGGAGCATaGCCAAGGAGGAACTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LVSSCLISEEAQTSGTGLGRPGA*PRRNCS Trigger: GCTACAGTTCCTCCTTGGCCATGCTCCTGGTCGCCC...CAGGCCTGTCCCCGAGGTCTGAGCTTCCTCAGAGATCAAGCAAGAGGAGACTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR CCA 90 bp | CAGGCCTGTTTCCTGCTCCAGGATGACCTAGTCTCCTCTTGCTTGATCTCTGAGCCTTGGTGCTGTGGGTaGGGCCGTTGGTGGCGTTGC | + |
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Preference number: 4 (lower is better) Translates to: QACFLLQDDLVSSCLISEPWCCG*GRWWRC Trigger: GCAACGCCACCAACGGCCCCACCCACAGCACCAAGG...CTCAGAGATCAAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAAACAGGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR CCA 90 bp | AGAAAGACCAAATCCCAGGCCTGTTTCCTGCTCCAGGATGACCTAGTCTCCTCTCCAGCCTTGGTGCTGTaGGTGGGGCCGTTGGTGGCG | + |
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Preference number: 4 (lower is better) Translates to: RKTKSQACFLLQDDLVSSPALVL*VGPLVA Trigger: CGCCACCAACGGCCCCACCCACAGCACCAAGGCTGG...AGAGGAGACTAGGTCATCCTGGAGCAGGAAACAGGCCTGGGATTTGGTCTTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR TCA 90 bp | GATGTCCATCCTACCGAGCATCCAACCCTTTGTCTGCTGCTGGCTTGCTGCAGCTCACAGGCCCTCGAATaGCCCACCAGATGGAAGCGT | + |
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Preference number: 4 (lower is better) Translates to: DVHPTEHPTLCLLLACCSSQALE*PTRWKR Trigger: ACGCTTCCATCTGGTGGGTCATTCGAGGGCCTGTGA...GCTGCAGCAAGCCAGCAGCAGACAAAGGGTTGGATGCTCGGTAGGATGGACATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR GCA 90 bp | ACTAGAAAGACCAAATCCCAGGCCTGTTTCCTGCTCCAGGATGACCTAGTCTCCAGGTGCCAGCCTTGGTaGTGTGGGTGGGGCCGTTGG | + |
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Preference number: 4 (lower is better) Translates to: TRKTKSQACFLLQDDLVSRCQPW*CGWGRW Trigger: CCAACGGCCCCACCCACAGCACCAAGGCTGGCACCT...GGAGACTAGGTCATCCTGGAGCAGGAAACAGGCCTGGGATTTGGTCTTTCTAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR CCA 90 bp | TGTTTCCTGCTCCAGGATGACCTAGTCTCCTCTTGCTTGATCTCTGAGGAAGCTCCAGCCTTGGTGCTGTaGGTGGGGCCGTTGGTGGCG | + |
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Preference number: 4 (lower is better) Translates to: CFLLQDDLVSSCLISEEAPALVL*VGPLVA Trigger: CGCCACCAACGGCCCCACCCACAGCACCAAGGCTGG...AGCTTCCTCAGAGATCAAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR CCA 90 bp | AGAAAGACCAAATCCCAGGCCTGTTTCCTGCTCCAGGATGACCTAGTCTCCTCTCAGAGGTGCCAGCCTTaGTGCTGTGGGTGGGGCCGT | + |
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Preference number: 4 (lower is better) Translates to: RKTKSQACFLLQDDLVSSQRCQP*CCGWGR Trigger: ACGGCCCCACCCACAGCACCAAGGCTGGCACCTCTG...AGAGGAGACTAGGTCATCCTGGAGCAGGAAACAGGCCTGGGATTTGGTCTTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR TCA 90 bp | ACTAGAAAGACCAAATCCCAGGCCTGTTTCCTGCTCCAGGATGACCTAGTCTCCCCACAGCAGAAGCAGTaGCAGCCGGGGGCTCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: TRKTKSQACFLLQDDLVSPQQKQ*QPGAHG Trigger: ACCATGAGCCCCCGGCTGTCACTGCTTCTGCTGTGG...GGAGACTAGGTCATCCTGGAGCAGGAAACAGGCCTGGGATTTGGTCTTTCTAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR TCA 90 bp | TTCCTGCTCCAGGATGACCTAGTCTCCTCTTGCTTGATCTCTGAGGAAGCTCAGCCACAGCAGAAGCAGTaGCAGCCGGGGGCTCATGGT | + |
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Preference number: 4 (lower is better) Translates to: FLLQDDLVSSCLISEEAQPQQKQ*QPGAHG Trigger: ACCATGAGCCCCCGGCTGTCACTGCTTCTGCTGTGG...CTGAGCTTCCTCAGAGATCAAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR TCA 90 bp | CTAGTCTCCTCTTGCTTGATCTCTGAGGAAGCTCAGACCTCGGGGACAGGCCTGCCTGGGGAAGGTTTCTaGCCAGCCATCCTTTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: LVSSCLISEEAQTSGTGLPGEGF*PAILCA Trigger: TGCACAAAGGATGGCTGGTCAGAAACCTTCCCCAGG...CAGGCCTGTCCCCGAGGTCTGAGCTTCCTCAGAGATCAAGCAAGAGGAGACTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR TCA 90 bp | CAGGCCTGTTTCCTGCTCCAGGATGACCTAGTCTCCTCTTGCTTGATCTCTGAGAAGAGCACAGGATGCTaGGGGCGACCAGGAGCATGG | + |
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Preference number: 4 (lower is better) Translates to: QACFLLQDDLVSSCLISEKSTGC*GRPGAW Trigger: CCATGCTCCTGGTCGCCCTCAGCATCCTGTGCTCTT...CTCAGAGATCAAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAAACAGGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR TCA 90 bp | CTAGTCTCCTCTTGCTTGATCTCTGAGGAAGCTCAGACCTCGGGGACAGGCCTGACAGGGCGCGAAGGATaGAGGACACAAACAGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: LVSSCLISEEAQTSGTGLTGREG*RTQTGA Trigger: TGCACCTGTTTGTGTCCTTCATCCTTCGCGCCCTGT...CAGGCCTGTCCCCGAGGTCTGAGCTTCCTCAGAGATCAAGCAAGAGGAGACTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR TCA 90 bp | CTAGTCTCCTCTTGCTTGATCTCTGAGGAAGCTCAGACCTCGGGGACAGGCCTGACTGGAAGAAGATCATaGCCAGCTTGCAGCCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: LVSSCLISEEAQTSGTGLTGRRS*PACSLP Trigger: GGGCAGGCTGCAAGCTGGTCATGATCTTCTTCCAGT...CAGGCCTGTCCCCGAGGTCTGAGCTTCCTCAGAGATCAAGCAAGAGGAGACTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR GCA 90 bp | TTCCTGCTCCAGGATGACCTAGTCTCCTCTTGCTTGATCTCTGAGGAAGCTCAGCACTGTCTGTGCCAGTaGCGAGGAGGGCCAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: FLLQDDLVSSCLISEEAQHCLCQ*RGGPAA Trigger: AGCTGCTGGCCCTCCTCGGCACTGGCACAGACAGTG...CTGAGCTTCCTCAGAGATCAAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR CCA 90 bp | CAGGCCTGTTTCCTGCTCCAGGATGACCTAGTCTCCTCTTGCTTGATCTCTGAGAGGCCAGGTCAGGCCTaGGGAAGGTTTCTGACCAGC | + |
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Preference number: 4 (lower is better) Translates to: QACFLLQDDLVSSCLISERPGQA*GRFLTS Trigger: GCTGGTCAGAAACCTTCCCCAGGCCTGACCTGGCCT...CTCAGAGATCAAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAAACAGGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR CCA 90 bp | GACCTAGTCTCCTCTTGCTTGATCTCTGAGGAAGCTCAGACCTCGGGGACAGGCGCAGGAGGGTGGACTTaGCCAGGCGCTTATAATGGT | + |
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Preference number: 4 (lower is better) Translates to: DLVSSCLISEEAQTSGTGAGGWT*PGAYNG Trigger: ACCATTATAAGCGCCTGGCCAAGTCCACCCTCCTGC...GCCTGTCCCCGAGGTCTGAGCTTCCTCAGAGATCAAGCAAGAGGAGACTAGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR TCA 90 bp | AGAAAGACCAAATCCCAGGCCTGTTTCCTGCTCCAGGATGACCTAGTCTCCTCTAAGAGCACAGGATGCTaGGGGCGACCAGGAGCATGG | + |
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Preference number: 4 (lower is better) Translates to: RKTKSQACFLLQDDLVSSKSTGC*GRPGAW Trigger: CCATGCTCCTGGTCGCCCTCAGCATCCTGTGCTCTT...AGAGGAGACTAGGTCATCCTGGAGCAGGAAACAGGCCTGGGATTTGGTCTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR GCA 90 bp | TGTTTCCTGCTCCAGGATGACCTAGTCTCCTCTTGCTTGATCTCTGAGGAAGCTCACTGTCTGTGCCAGTaGCGAGGAGGGCCAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: CFLLQDDLVSSCLISEEAHCLCQ*RGGPAA Trigger: AGCTGCTGGCCCTCCTCGGCACTGGCACAGACAGTG...AGCTTCCTCAGAGATCAAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR CCA 90 bp | TTCCTGCTCCAGGATGACCTAGTCTCCTCTTGCTTGATCTCTGAGGAAGCTCAGAGGCCAGGTCAGGCCTaGGGAAGGTTTCTGACCAGC | + |
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Preference number: 4 (lower is better) Translates to: FLLQDDLVSSCLISEEAQRPGQA*GRFLTS Trigger: GCTGGTCAGAAACCTTCCCCAGGCCTGACCTGGCCT...CTGAGCTTCCTCAGAGATCAAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR CCA 90 bp | TTCCTGCTCCAGGATGACCTAGTCTCCTCTTGCTTGATCTCTGAGGAAGCTCAGACAGCTGGACCTCCATaGCACCCTCTGGGGAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: FLLQDDLVSSCLISEEAQTAGPP*HPLGRR Trigger: CCTTCTCCCCAGAGGGTGCCATGGAGGTCCAGCTGT...CTGAGCTTCCTCAGAGATCAAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| 3UTR CAA 72 bp | TGTTTCCTGCTCCAGGATGACCTAGTCTCCTCTTGCTaGATCTCTGAGGAAGCTCAGACCTCGGGGACAGGC | + |
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Preference number: 4 (lower is better) Translates to: CFLLQDDLVSSC*ISEEAQTSGTG Trigger: GCCTGTCCCCGAGGTCTGAGCTTCCTCAGAGATCAAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR TCA 90 bp | GACCTAGTCTCCTCTTGCTTGATCTCTGAGGAAGCTCAGACCTCGGGGACAGGCTGGAAGCGTTGGAGTTaGTGTCCCAGCATCCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: DLVSSCLISEEAQTSGTGWKRWS*CPSIQS Trigger: ACTTTGGATGCTGGGACATCAACTCCAACGCTTCCA...GCCTGTCCCCGAGGTCTGAGCTTCCTCAGAGATCAAGCAAGAGGAGACTAGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR TCA 90 bp | ACTAGAAAGACCAAATCCCAGGCCTGTTTCCTGCTCCAGGATGACCTAGTCTCCTCACAGGCCCTCGAATaGCCCACCAGATGGAAGCGT | + |
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Preference number: 4 (lower is better) Translates to: TRKTKSQACFLLQDDLVSSQALE*PTRWKR Trigger: ACGCTTCCATCTGGTGGGTCATTCGAGGGCCTGTGA...GGAGACTAGGTCATCCTGGAGCAGGAAACAGGCCTGGGATTTGGTCTTTCTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR CCA 90 bp | CCTTCTGGGGCCGCTGAAGTGCTCTTCTTAGAAGAACTAGAAAGACCAAATCCCGGGCGACCAGGAGCATaGCCAAGGAGGAACTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: PSGAAEVLFLEELERPNPGRPGA*PRRNCS Trigger: GCTACAGTTCCTCCTTGGCCATGCTCCTGGTCGCCC...GGGATTTGGTCTTTCTAGTTCTTCTAAGAAGAGCACTTCAGCGGCCCCAGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR CCA 90 bp | CCTTCTGGGGCCGCTGAAGTGCTCTTCTTAGAAGAACTAGAAAGACCAAATCCCACAGCTGGACCTCCATaGCACCCTCTGGGGAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: PSGAAEVLFLEELERPNPTAGPP*HPLGRR Trigger: CCTTCTCCCCAGAGGGTGCCATGGAGGTCCAGCTGT...GGGATTTGGTCTTTCTAGTTCTTCTAAGAAGAGCACTTCAGCGGCCCCAGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR TCA 90 bp | CCTTCTGGGGCCGCTGAAGTGCTCTTCTTAGAAGAACTAGAAAGACCAAATCCCAGGAGCCATTCATGTTaGCCCCACAGGCCAGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: PSGAAEVLFLEELERPNPRSHSC*PHRPGQ Trigger: CTGACCTGGCCTGTGGGGTCAACATGAATGGCTCCT...GGGATTTGGTCTTTCTAGTTCTTCTAAGAAGAGCACTTCAGCGGCCCCAGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR TCA 90 bp | AGAAAGACCAAATCCCAGGCCTGTTTCCTGCTCCAGGATGACCTAGTCTCCTCTACAGGGCGCGAAGGATaGAGGACACAAACAGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: RKTKSQACFLLQDDLVSSTGREG*RTQTGA Trigger: TGCACCTGTTTGTGTCCTTCATCCTTCGCGCCCTGT...AGAGGAGACTAGGTCATCCTGGAGCAGGAAACAGGCCTGGGATTTGGTCTTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR TCA 90 bp | CAGGCCTGTTTCCTGCTCCAGGATGACCTAGTCTCCTCTTGCTTGATCTCTGAGGCTGCACCTCACCATTaGGGAAGCAGTAAAGGACAG | + |
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Preference number: 4 (lower is better) Translates to: QACFLLQDDLVSSCLISEAAPHH*GSSKGQ Trigger: CTGTCCTTTACTGCTTCCTCAATGGTGAGGTGCAGC...CTCAGAGATCAAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAAACAGGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072886.11 |
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| CDS-3UTR GCA 90 bp | TTCCTGCTCCAGGATGACCTAGTCTCCTCTTGCTTGATCTCTGAGGAAGCTCAGAGAGCTCCAACAGGGTaGGCTGCATTGATGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: FLLQDDLVSSCLISEEAQRAPTG*AALMSS Trigger: GCTGCTCATCAATGCAGCGCACCCTGTTGGAGCTCT...CTGAGCTTCCTCAGAGATCAAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR GCA 90 bp | CAGGCCTGTTTCCTGCTCCAGGATGACCTAGTCTCCTCTTGCTTGATCTCTGAGACCAGCCATCCTTTGTaGAGTTCCGGAACAGAGACC | + |
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Preference number: 4 (lower is better) Translates to: QACFLLQDDLVSSCLISETSHPL*SSGTET Trigger: GGTCTCTGTTCCGGAACTGCACAAAGGATGGCTGGT...CTCAGAGATCAAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAAACAGGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR GCA 90 bp | GACCTAGTCTCCTCTTGCTTGATCTCTGAGGAAGCTCAGACCTCGGGGACAGGCAAGAGCACAAATGCCTaGAGGCACTTCCTTTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: DLVSSCLISEEAQTSGTGKSTNA*RHFLSE Trigger: CTCAGAAAGGAAGTGCCTGCAGGCATTTGTGCTCTT...GCCTGTCCCCGAGGTCTGAGCTTCCTCAGAGATCAAGCAAGAGGAGACTAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR CCA 90 bp | GATGTCCATCCTACCGAGCATCCAACCCTTTGTCTGCTGCTGGCTTGCTGCAGCGCCATGATGCAGTACTaGAAGAAGATCATGACCAGC | + |
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Preference number: 4 (lower is better) Translates to: DVHPTEHPTLCLLLACCSAMMQY*KKIMTS Trigger: GCTGGTCATGATCTTCTTCCAGTACTGCATCATGGC...GCTGCAGCAAGCCAGCAGCAGACAAAGGGTTGGATGCTCGGTAGGATGGACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR CCA 90 bp | GACCTAGTCTCCTCTTGCTTGATCTCTGAGGAAGCTCAGACCTCGGGGACAGGCAGCAACAAAAATGGCTaGAGAACCCCATCCGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: DLVSSCLISEEAQTSGTGSNKNG*RTPSEE Trigger: CTCTTCGGATGGGGTTCTCCAGCCATTTTTGTTGCT...GCCTGTCCCCGAGGTCTGAGCTTCCTCAGAGATCAAGCAAGAGGAGACTAGGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR CCA 90 bp | AGAAAGACCAAATCCCAGGCCTGTTTCCTGCTCCAGGATGACCTAGTCTCCTCTGCAGGAGGGTGGACTTaGCCAGGCGCTTATAATGGT | + |
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Preference number: 4 (lower is better) Translates to: RKTKSQACFLLQDDLVSSAGGWT*PGAYNG Trigger: ACCATTATAAGCGCCTGGCCAAGTCCACCCTCCTGC...AGAGGAGACTAGGTCATCCTGGAGCAGGAAACAGGCCTGGGATTTGGTCTTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR CCA 90 bp | AGAAAGACCAAATCCCAGGCCTGTTTCCTGCTCCAGGATGACCTAGTCTCCTCTCTCCATGGCACCCTCTaGGGAGAAGGCGAAGACAAT | + |
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Preference number: 4 (lower is better) Translates to: RKTKSQACFLLQDDLVSSLHGTL*GEGEDN Trigger: ATTGTCTTCGCCTTCTCCCCAGAGGGTGCCATGGAG...AGAGGAGACTAGGTCATCCTGGAGCAGGAAACAGGCCTGGGATTTGGTCTTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR CCA 90 bp | ACTAGAAAGACCAAATCCCAGGCCTGTTTCCTGCTCCAGGATGACCTAGTCTCCCTCCATGGCACCCTCTaGGGAGAAGGCGAAGACAAT | + |
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Preference number: 4 (lower is better) Translates to: TRKTKSQACFLLQDDLVSLHGTL*GEGEDN Trigger: ATTGTCTTCGCCTTCTCCCCAGAGGGTGCCATGGAG...GGAGACTAGGTCATCCTGGAGCAGGAAACAGGCCTGGGATTTGGTCTTTCTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS-3UTR TCA 90 bp | CCTTCTGGGGCCGCTGAAGTGCTCTTCTTAGAAGAACTAGAAAGACCAAATCCCCCTGGGGAAGGTTTCTaGCCAGCCATCCTTTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSGAAEVLFLEELERPNPPGEGF*PAILCA Trigger: TGCACAAAGGATGGCTGGTCAGAAACCTTCCCCAGG...GGGATTTGGTCTTTCTAGTTCTTCTAAGAAGAGCACTTCAGCGGCCCCAGAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS-3UTR TCA 90 bp | TGTTTCCTGCTCCAGGATGACCTAGTCTCCTCTTGCTTGATCTCTGAGGAAGCTACTGGAAGAAGATCATaGCCAGCTTGCAGCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CFLLQDDLVSSCLISEEATGRRS*PACSLP Trigger: GGGCAGGCTGCAAGCTGGTCATGATCTTCTTCCAGT...AGCTTCCTCAGAGATCAAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCCTGTTTCCTGCTCCAGGATGACCTAGTCTCCTCTTGCTTGATCTCTGAGACGCGTAGTTGGCCATaGTGCAGTACTGGAAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QACFLLQDDLVSSCLISETRSWP*CSTGRR Trigger: TCTTCTTCCAGTACTGCATCATGGCCAACTACGCGT...CTCAGAGATCAAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAAACAGGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS-3UTR TCA 90 bp | TTCCTGCTCCAGGATGACCTAGTCTCCTCTTGCTTGATCTCTGAGGAAGCTCAGCAGGCACTTCCTTTCTaGGAAGAAGGAGATGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLLQDDLVSSCLISEEAQQALPF*EEGDGQ Trigger: CTGGCCATCTCCTTCTTCTCAGAAAGGAAGTGCCTG...CTGAGCTTCCTCAGAGATCAAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAGACCAAATCCCAGGCCTGTTTCCTGCTCCAGGATGACCTAGTCTCCTCTCAGGCACTTCCTTTCTaGGAAGAAGGAGATGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RKTKSQACFLLQDDLVSSQALPF*EEGDGQ Trigger: CTGGCCATCTCCTTCTTCTCAGAAAGGAAGTGCCTG...AGAGGAGACTAGGTCATCCTGGAGCAGGAAACAGGCCTGGGATTTGGTCTTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS-3UTR GCA 90 bp | ACTAGAAAGACCAAATCCCAGGCCTGTTTCCTGCTCCAGGATGACCTAGTCTCCACCAGCCATCCTTTGTaGAGTTCCGGAACAGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: TRKTKSQACFLLQDDLVSTSHPL*SSGTET Trigger: GGTCTCTGTTCCGGAACTGCACAAAGGATGGCTGGT...GGAGACTAGGTCATCCTGGAGCAGGAAACAGGCCTGGGATTTGGTCTTTCTAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS-3UTR TCA 90 bp | ACTAGAAAGACCAAATCCCAGGCCTGTTTCCTGCTCCAGGATGACCTAGTCTCCACGCGTAGTTGGCCATaGTGCAGTACTGGAAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TRKTKSQACFLLQDDLVSTRSWP*CSTGRR Trigger: TCTTCTTCCAGTACTGCATCATGGCCAACTACGCGT...GGAGACTAGGTCATCCTGGAGCAGGAAACAGGCCTGGGATTTGGTCTTTCTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS-3UTR TCA 90 bp | TTCCTGCTCCAGGATGACCTAGTCTCCTCTTGCTTGATCTCTGAGGAAGCTCAGCCAGAAAGTGTCTGGTaGCAGCCCACAAAGCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: FLLQDDLVSSCLISEEAQPESVW*QPTKQQ Trigger: TTGTTGCTTTGTGGGCTGTCACCAGACACTTTCTGG...CTGAGCTTCCTCAGAGATCAAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAGACCAAATCCCAGGCCTGTTTCCTGCTCCAGGATGACCTAGTCTCCTCTCCAGAAAGTGTCTGGTaGCAGCCCACAAAGCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: RKTKSQACFLLQDDLVSSPESVW*QPTKQQ Trigger: TTGTTGCTTTGTGGGCTGTCACCAGACACTTTCTGG...AGAGGAGACTAGGTCATCCTGGAGCAGGAAACAGGCCTGGGATTTGGTCTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAGACCAAATCCCAGGCCTGTTTCCTGCTCCAGGATGACCTAGTCTCCTCTTGGAAGCGTTGGAGTTaGTGTCCCAGCATCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RKTKSQACFLLQDDLVSSWKRWS*CPSIQS Trigger: ACTTTGGATGCTGGGACATCAACTCCAACGCTTCCA...AGAGGAGACTAGGTCATCCTGGAGCAGGAAACAGGCCTGGGATTTGGTCTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS-3UTR GCA 90 bp | CAGGCCTGTTTCCTGCTCCAGGATGACCTAGTCTCCTCTTGCTTGATCTCTGAGACAGAGACCCATTTCTaGCAGAGAACATCCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QACFLLQDDLVSSCLISETETHF*QRTSSG Trigger: TCCTGAGGATGTTCTCTGGCAGAAATGGGTCTCTGT...CTCAGAGATCAAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAAACAGGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS-3UTR GCA 90 bp | TTCCTGCTCCAGGATGACCTAGTCTCCTCTTGCTTGATCTCTGAGGAAGCTCAGTCCGAAGAGCACAAATaGCTGCAGGCACTTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLLQDDLVSSCLISEEAQSEEHK*LQALPF Trigger: GAAAGGAAGTGCCTGCAGGCATTTGTGCTCTTCGGA...CTGAGCTTCCTCAGAGATCAAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTGCTCCAGGATGACCTAGTCTCCTCTTGCTTGATCTCTGAGGAAGCTCAGCTGAGAAGAAGGAGATaGCCAGGAGCGTGTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FLLQDDLVSSCLISEEAQLRRRR*PGACED Trigger: ATCTTCACACGCTCCTGGCCATCTCCTTCTTCTCAG...CTGAGCTTCCTCAGAGATCAAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS-3UTR GCA 90 bp | ACTAGAAAGACCAAATCCCAGGCCTGTTTCCTGCTCCAGGATGACCTAGTCTCCACAGAGACCCATTTCTaGCAGAGAACATCCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TRKTKSQACFLLQDDLVSTETHF*QRTSSG Trigger: TCCTGAGGATGTTCTCTGGCAGAAATGGGTCTCTGT...GGAGACTAGGTCATCCTGGAGCAGGAAACAGGCCTGGGATTTGGTCTTTCTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS-3UTR GCA 90 bp | TTCCTGCTCCAGGATGACCTAGTCTCCTCTTGCTTGATCTCTGAGGAAGCTCAGAAGAGCACAAATGCCTaGAGGCACTTCCTTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLLQDDLVSSCLISEEAQKSTNA*RHFLSE Trigger: CTCAGAAAGGAAGTGCCTGCAGGCATTTGTGCTCTT...CTGAGCTTCCTCAGAGATCAAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS-3UTR GCA 90 bp | TGTTTCCTGCTCCAGGATGACCTAGTCTCCTCTTGCTTGATCTCTGAGGAAGCTTCCGAAGAGCACAAATaGCTGCAGGCACTTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CFLLQDDLVSSCLISEEASEEHK*LQALPF Trigger: GAAAGGAAGTGCCTGCAGGCATTTGTGCTCTTCGGA...AGCTTCCTCAGAGATCAAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCTGGGGCCGCTGAAGTGCTCTTCTTAGAAGAACTAGAAAGACCAAATCCCCTGAGAAGAAGGAGATaGCCAGGAGCGTGTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PSGAAEVLFLEELERPNPLRRRR*PGACED Trigger: ATCTTCACACGCTCCTGGCCATCTCCTTCTTCTCAG...GGGATTTGGTCTTTCTAGTTCTTCTAAGAAGAGCACTTCAGCGGCCCCAGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTCCTGCTCCAGGATGACCTAGTCTCCTCTTGCTTGATCTCTGAGGAAGCTAGCAACAAAAATGGCTaGAGAACCCCATCCGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CFLLQDDLVSSCLISEEASNKNG*RTPSEE Trigger: CTCTTCGGATGGGGTTCTCCAGCCATTTTTGTTGCT...AGCTTCCTCAGAGATCAAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS-3UTR CAA 90 bp | GATGTCCATCCTACCGAGCATCCAACCCTTTGTCTGCTGCTGGCTTGCTGCAGCCTGTGGGTGGGGCCGTaGGTGGCGTTGCTGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: DVHPTEHPTLCLLLACCSLWVGP*VALLKE Trigger: CTCCTTCAGCAACGCCACCAACGGCCCCACCCACAG...GCTGCAGCAAGCCAGCAGCAGACAAAGGGTTGGATGCTCGGTAGGATGGACATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS TCA 90 bp | CGAGGAGGGCCAGCAGCTCATGTTGTCCCAAAACCTCTCACAGCCTaGTGCTGTCTTCGGGCCCAGCGCCTTCTTCTCTTCGGAGAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RGGPAAHVVPKPLTA*CCLRAQRLLLFGEF Trigger: GAACTCTCCGAAGAGAAGAAGGCGCTGGGCCCGAAGACAGCATCAGGCTGTGAGAGGTTTTGGGACAACATGAGCTGCTGGCCCTCCTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189037.2 |
||
| CDS GCA 90 bp | AGCACACGCCGCACATCACACAATCTGGGCAGAGCTCCAACAGGGTaGGCTGCATTGATGAGCAGCAGCAGCCACAGCAGAAGCAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: STRRTSHNLGRAPTG*AALMSSSSHSRSSD Trigger: GTCACTGCTTCTGCTGTGGCTGCTGCTGCTCATCAATGCAGCGCACCCTGTTGGAGCTCTGCCCAGATTGTGTGATGTGCGGCGTGTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS-3UTR CAA 90 bp | TTCCTGCTCCAGGATGACCTAGTCTCCTCTTGCTTGATCTCTGAGGAAGCTCAGTCAGAGGTGCCAGCCTaGGTGCTGTGGGTGGGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: FLLQDDLVSSCLISEEAQSEVPA*VLWVGP Trigger: CGGCCCCACCCACAGCACCAAGGCTGGCACCTCTGA...CTGAGCTTCCTCAGAGATCAAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS-3UTR CAA 90 bp | ACTAGAAAGACCAAATCCCAGGCCTGTTTCCTGCTCCAGGATGACCTAGTCTCCCTGTGGGTGGGGCCGTaGGTGGCGTTGCTGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TRKTKSQACFLLQDDLVSLWVGP*VALLKE Trigger: CTCCTTCAGCAACGCCACCAACGGCCCCACCCACAG...GGAGACTAGGTCATCCTGGAGCAGGAAACAGGCCTGGGATTTGGTCTTTCTAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS-3UTR CAA 90 bp | CCTTCTGGGGCCGCTGAAGTGCTCTTCTTAGAAGAACTAGAAAGACCAAATCCCTCAGAGGTGCCAGCCTaGGTGCTGTGGGTGGGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PSGAAEVLFLEELERPNPSEVPA*VLWVGP Trigger: CGGCCCCACCCACAGCACCAAGGCTGGCACCTCTGA...GGGATTTGGTCTTTCTAGTTCTTCTAAGAAGAGCACTTCAGCGGCCCCAGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS-3UTR CAA 90 bp | GATGTCCATCCTACCGAGCATCCAACCCTTTGTCTGCTGCTGGCTTGCTGCAGCCACCAGATGGAAGCGTaGGAGTTGATGTCCCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: DVHPTEHPTLCLLLACCSHQMEA*ELMSQH Trigger: ATGCTGGGACATCAACTCCAACGCTTCCATCTGGTG...GCTGCAGCAAGCCAGCAGCAGACAAAGGGTTGGATGCTCGGTAGGATGGACATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS-3UTR CAA 90 bp | ACTAGAAAGACCAAATCCCAGGCCTGTTTCCTGCTCCAGGATGACCTAGTCTCCAAGATCATGACCAGCTaGCAGCCTGCCCTGTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TRKTKSQACFLLQDDLVSKIMTS*QPALWA Trigger: TGCCCACAGGGCAGGCTGCAAGCTGGTCATGATCTT...GGAGACTAGGTCATCCTGGAGCAGGAAACAGGCCTGGGATTTGGTCTTTCTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS-3UTR CAA 90 bp | ACTAGAAAGACCAAATCCCAGGCCTGTTTCCTGCTCCAGGATGACCTAGTCTCCAAGGAGCCATTCATGTaGACCCCACAGGCCAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TRKTKSQACFLLQDDLVSKEPFM*TPQARS Trigger: TGACCTGGCCTGTGGGGTCAACATGAATGGCTCCTT...GGAGACTAGGTCATCCTGGAGCAGGAAACAGGCCTGGGATTTGGTCTTTCTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS-3UTR CAA 90 bp | GATGTCCATCCTACCGAGCATCCAACCCTTTGTCTGCTGCTGGCTTGCTGCAGCACAGTGTACATGACCTaGAGCTTCAGCAGGTATGCA | + |
|
Preference number: 5 (lower is better) Translates to: DVHPTEHPTLCLLLACCSTVYMT*SFSRYA Trigger: TGCATACCTGCTGAAGCTCAAGGTCATGTACACTGT...GCTGCAGCAAGCCAGCAGCAGACAAAGGGTTGGATGCTCGGTAGGATGGACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS-3UTR CAA 90 bp | TTCCTGCTCCAGGATGACCTAGTCTCCTCTTGCTTGATCTCTGAGGAAGCTCAGAAGAGTACGGCGTCCTaGATGAAGTTGGACAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: FLLQDDLVSSCLISEEAQKSTAS*MKLDRA Trigger: CGCCCTGTCCAACTTCATCAAGGACGCCGTACTCTT...CTGAGCTTCCTCAGAGATCAAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS-3UTR CAA 90 bp | TGTTTCCTGCTCCAGGATGACCTAGTCTCCTCTTGCTTGATCTCTGAGGAAGCTAAGATCATGACCAGCTaGCAGCCTGCCCTGTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CFLLQDDLVSSCLISEEAKIMTS*QPALWA Trigger: TGCCCACAGGGCAGGCTGCAAGCTGGTCATGATCTT...AGCTTCCTCAGAGATCAAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS-3UTR CAA 90 bp | TGTTTCCTGCTCCAGGATGACCTAGTCTCCTCTTGCTTGATCTCTGAGGAAGCTAAGGAGCCATTCATGTaGACCCCACAGGCCAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: CFLLQDDLVSSCLISEEAKEPFM*TPQARS Trigger: TGACCTGGCCTGTGGGGTCAACATGAATGGCTCCTT...AGCTTCCTCAGAGATCAAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAGACCAAATCCCAGGCCTGTTTCCTGCTCCAGGATGACCTAGTCTCCTCTCACCAGATGGAAGCGTaGGAGTTGATGTCCCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: RKTKSQACFLLQDDLVSSHQMEA*ELMSQH Trigger: ATGCTGGGACATCAACTCCAACGCTTCCATCTGGTG...AGAGGAGACTAGGTCATCCTGGAGCAGGAAACAGGCCTGGGATTTGGTCTTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS-3UTR CAA 90 bp | TTCCTGCTCCAGGATGACCTAGTCTCCTCTTGCTTGATCTCTGAGGAAGCTCAGACAGTGTACATGACCTaGAGCTTCAGCAGGTATGCA | + |
|
Preference number: 5 (lower is better) Translates to: FLLQDDLVSSCLISEEAQTVYMT*SFSRYA Trigger: TGCATACCTGCTGAAGCTCAAGGTCATGTACACTGT...CTGAGCTTCCTCAGAGATCAAGCAAGAGGAGACTAGGTCATCCTGGAGCAGGAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS GCA 90 bp | GGAACTGTAGCCTACAGTGTACATGACCTTGAGCTTCAGCAGGTATaGATGCCGTCTCTCATTAAAGGAGCCATTCATGTTGACCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: GTVAYSVHDLELQQV*MPSLIKGAIHVDPT Trigger: TGTGGGGTCAACATGAATGGCTCCTTTAATGAGAGACGGCATGCATACCTGCTGAAGCTCAAGGTCATGTACACTGTAGGCTACAGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS CAA 72 bp | CCGGGGATGCTCCGGCTCTGCTCAGAGGTGCCAGCCTaGGTGCTGTGGGTGGGGCCGTTGGTGGCGTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PGMLRLCSEVPA*VLWVGPLVALL Trigger: CAGCAACGCCACCAACGGCCCCACCCACAGCACCAAGGCTGGCACCTCTGAGCAGAGCCGGAGCATCCCCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS CAA 90 bp | TCAGAGGTGCCAGCCTTGGTGCTGTGGGTGGGGCCGTTGGTGGCGTaGCTGAAGGAGTTGCTGAGGGCCACAGGGCGCAGCGGGAACTCT | + |
|
Preference number: 6 (lower is better) Translates to: SEVPALVLWVGPLVA*LKELLRATGRSGNS Trigger: AGAGTTCCCGCTGCGCCCTGTGGCCCTCAGCAACTCCTTCAGCAACGCCACCAACGGCCCCACCCACAGCACCAAGGCTGGCACCTCTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS CCA 72 bp | CTCCGGCTCTGCTCAGAGGTGCCAGCCTTGGTGCTGTaGGTGGGGCCGTTGGTGGCGTTGCTGAAGGAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LRLCSEVPALVL*VGPLVALLKEL Trigger: CAACTCCTTCAGCAACGCCACCAACGGCCCCACCCACAGCACCAAGGCTGGCACCTCTGAGCAGAGCCGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS CAA 90 bp | CGCACATCACACAATCTGGGCAGAGCTCCAACAGGGTGCGCTGCATaGATGAGCAGCAGCAGCCACAGCAGAAGCAGTGACAGCCGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RTSHNLGRAPTGCAA*MSSSSHSRSSDSRG Trigger: CCCCCGGCTGTCACTGCTTCTGCTGTGGCTGCTGCTGCTCATCAATGCAGCGCACCCTGTTGGAGCTCTGCCCAGATTGTGTGATGTGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS CCA 72 bp | CCCTGGAAGGAGCCCAGGGCCAATTCAAAGAACAGCTaGACCTCCATGGCACCCTCTGGGGAGAAGGCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PWKEPRANSKNS*TSMAPSGEKAK Trigger: CTTCGCCTTCTCCCCAGAGGGTGCCATGGAGGTCCAGCTGTTCTTTGAATTGGCCCTGGGCTCCTTCCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS GCA 72 bp | CGCACATCACACAATCTGGGCAGAGCTCCAACAGGGTaGGCTGCATTGATGAGCAGCAGCAGCCACAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RTSHNLGRAPTG*AALMSSSSHSR Trigger: TCTGCTGTGGCTGCTGCTGCTCATCAATGCAGCGCACCCTGTTGGAGCTCTGCCCAGATTGTGTGATGTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS GCA 72 bp | GCCTGCCCTGTGGGCATCACAGTAGGTGACGTCATCTaGGGGGAAGAGTACGGCGTCCTTGATGAAGTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: ACPVGITVGDVI*GEEYGVLDEVG Trigger: TCCAACTTCATCAAGGACGCCGTACTCTTCCCCGCAGATGACGTCACCTACTGTGATGCCCACAGGGCAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS TCA 72 bp | CCAGCAGCTCATGTTGTCCCAAAACCTCTCACAGCCTaGTGCTGTCTTCGGGCCCAGCGCCTTCTTCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PAAHVVPKPLTA*CCLRAQRLLLF Trigger: GAAGAGAAGAAGGCGCTGGGCCCGAAGACAGCATCAGGCTGTGAGAGGTTTTGGGACAACATGAGCTGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189037.2 |
||
| CDS CCA 72 bp | ATTTCTGCCAGAGAACATCCTCAGGAACTTCGGACATaGCACTTCCACTGTCTGTGCCAGTGCCGAGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: ISAREHPQELRT*HFHCLCQCRGG Trigger: CCCTCCTCGGCACTGGCACAGACAGTGGAAGTGCCATGTCCGAAGTTCCTGAGGATGTTCTCTGGCAGAAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS CCA 72 bp | AGCCCAGGGCCAATTCAAAGAACAGCTGGACCTCCATaGCACCCTCTGGGGAGAAGGCGAAGACAATGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: SPGPIQRTAGPP*HPLGRRRRQCS Trigger: ACTACATTGTCTTCGCCTTCTCCCCAGAGGGTGCCATGGAGGTCCAGCTGTTCTTTGAATTGGCCCTGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
||
| CDS CAA 72 bp | GGCCCTCGAATGACCCACCAGATGGAAGCGTTGGAGTaGATGTCCCAGCATCCAAAGTCCTCCAGAAAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: GPRMTHQMEALE*MSQHPKSSRKC Trigger: ACACTTTCTGGAGGACTTTGGATGCTGGGACATCAACTCCAACGCTTCCATCTGGTGGGTCATTCGAGGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS CAA 72 bp | ATCACAGGCCCTCGAATGACCCACCAGATGGAAGCGTaGGAGTTGATGTCCCAGCATCCAAAGTCCTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: ITGPRMTHQMEA*ELMSQHPKSSR Trigger: TCTGGAGGACTTTGGATGCTGGGACATCAACTCCAACGCTTCCATCTGGTGGGTCATTCGAGGGCCTGTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS CCA 72 bp | GTGTCTGGTGACAGCCCACAAAGCAACAAAAATGGCTaGAGAACCCCATCCGAAGAGCACAAATGCCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: VSGDSPQSNKNG*RTPSEEHKCLQ Trigger: CTGCAGGCATTTGTGCTCTTCGGATGGGGTTCTCCAGCCATTTTTGTTGCTTTGTGGGCTGTCACCAGACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS CAA 90 bp | AGAATCACAGGCCCTCGAATGACCCACCAGATGGAAGCGTTGGAGTaGATGTCCCAGCATCCAAAGTCCTCCAGAAAGTGTCTGGTGACA | + |
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Preference number: 6 (lower is better) Translates to: RITGPRMTHQMEALE*MSQHPKSSRKCLVT Trigger: TGTCACCAGACACTTTCTGGAGGACTTTGGATGCTGGGACATCAACTCCAACGCTTCCATCTGGTGGGTCATTCGAGGGCCTGTGATTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS CAA 90 bp | ATGGACAGAATCACAGGCCCTCGAATGACCCACCAGATGGAAGCGTaGGAGTTGATGTCCCAGCATCCAAAGTCCTCCAGAAAGTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: MDRITGPRMTHQMEA*ELMSQHPKSSRKCL Trigger: CAGACACTTTCTGGAGGACTTTGGATGCTGGGACATCAACTCCAACGCTTCCATCTGGTGGGTCATTCGAGGGCCTGTGATTCTGTCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS TCA 72 bp | TCCGAAGAGCACAAATGCCTGCAGGCACTTCCTTTCTaGGAAGAAGGAGATGGCCAGGAGCGTGTGAAGATA | + |
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Preference number: 6 (lower is better) Translates to: SEEHKCLQALPF*EEGDGQERVKI Trigger: TATCTTCACACGCTCCTGGCCATCTCCTTCTTCTCAGAAAGGAAGTGCCTGCAGGCATTTGTGCTCTTCGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS CCA 72 bp | CAATTCAAAGAACAGCTGGACCTCCATGGCACCCTCTaGGGAGAAGGCGAAGACAATGTAGTGGATGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: QFKEQLDLHGTL*GEGEDNVVDAK Trigger: TTTGGCATCCACTACATTGTCTTCGCCTTCTCCCCAGAGGGTGCCATGGAGGTCCAGCTGTTCTTTGAATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS TCA 72 bp | TGTCCCAGCATCCAAAGTCCTCCAGAAAGTGTCTGGTaGCAGCCCACAAAGCAACAAAAATGGCTGGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: CPSIQSPPESVW*QPTKQQKWLEN Trigger: GTTCTCCAGCCATTTTTGTTGCTTTGTGGGCTGTCACCAGACACTTTCTGGAGGACTTTGGATGCTGGGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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| CDS GCA 72 bp | GCCTACAGTGTACATGACCTTGAGCTTCAGCAGGTATaGATGCCGTCTCTCATTAAAGGAGCCATTCATGTT | + |
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Preference number: 6 (lower is better) Translates to: AYSVHDLELQQV*MPSLIKGAIHV Trigger: AACATGAATGGCTCCTTTAATGAGAGACGGCATGCATACCTGCTGAAGCTCAAGGTCATGTACACTGTAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072886.11 ENSMUST00000189037.2 |
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