Pregenerated sensors for SCRT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060257Ensembl transcript IDs: ENSMUST00000064061.4
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AATAGGCGCCTGGCTGGCAGTCCCGGCCCCTCTGCCCGGGAGAGTTaGATAGTCGTGGCCGGGAGAGAGCACTCCTCCCGGGAGCAGGCC | + |
|
Preference number: 1 (lower is better) Translates to: NRRLAGSPGPSARES*IVVAGREHSSREQA Trigger: GGCCTGCTCCCGGGAGGAGTGCTCTCTCCCGGCCACGACTATGCAACTCTCCCGGGCAGAGGGGCCGGGACTGCCAGCCAGGCGCCTATT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR GCA 90 bp | GGGCAGGTGGGCGCGGAGGTGTGTGCTTCGGTCCTCGCCCGGGCATaGAAAAGCGCGGTGGAGGAGGTAGTGGTGGCCAATAGGCGCCTG | + |
|
Preference number: 1 (lower is better) Translates to: GQVGAEVCASVLARA*KSAVEEVVVANRRL Trigger: CAGGCGCCTATTGGCCACCACTACCTCCTCCACCGCGCTTTTGCATGCCCGGGCGAGGACCGAAGCACACACCTCCGCGCCCACCTGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR CCA 90 bp | GACGTGGAAAGAGGCGTGTGCTTAAAGCAGAGGGGGCCGGGCAGGTaGGCGCGGAGGTGTGTGCTTCGGTCCTCGCCCGGGCATGCAAAA | + |
|
Preference number: 1 (lower is better) Translates to: DVERGVCLKQRGPGR*ARRCVLRSSPGHAK Trigger: TTTTGCATGCCCGGGCGAGGACCGAAGCACACACCTCCGCGCCCACCTGCCCGGCCCCCTCTGCTTTAAGCACACGCCTCTTTCCACGTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR TCA 90 bp | CCCAGACCCATAAGGGGAGGAGCAGCCAGCGACGGACGGCCTTGCTaGCTCTACCCTTTGACTTCCCAGTCCAGCTGGGGAAGCCAGACA | + |
|
Preference number: 1 (lower is better) Translates to: PRPIRGGAASDGRPC*LYPLTSQSSWGSQT Trigger: TGTCTGGCTTCCCCAGCTGGACTGGGAAGTCAAAGGGTAGAGTCAGCAAGGCCGTCCGTCGCTGGCTGCTCCTCCCCTTATGGGTCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR TCA 90 bp | CGGGACATGGAAGAGGTACGGACCTGGTGCCTGAGTTGGGAGCCTTaGAGGCCAGACATGGGGGTCAAGGTCCGAGTGGTGGCCAGAATG | + |
|
Preference number: 1 (lower is better) Translates to: RDMEEVRTWCLSWEP*RPDMGVKVRVVARM Trigger: CATTCTGGCCACCACTCGGACCTTGACCCCCATGTCTGGCCTTCAAGGCTCCCAACTCAGGCACCAGGTCCGTACCTCTTCCATGTCCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR TCA 90 bp | GAAACTTCCAGCGCCGGGACATGGAAGAGGTACGGACCTGGTGCCTaGGTTGGGAGCCTTGAAGGCCAGACATGGGGGTCAAGGTCCGAG | + |
|
Preference number: 1 (lower is better) Translates to: ETSSAGTWKRYGPGA*VGSLEGQTWGSRSE Trigger: CTCGGACCTTGACCCCCATGTCTGGCCTTCAAGGCTCCCAACTCAGGCACCAGGTCCGTACCTCTTCCATGTCCCGGCGCTGGAAGTTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR CCA 90 bp | GCCAGAGGCCCCAGCGGGTCCGGGGCTCAGTCGGTCCCTGGAACCTaGGGTCCCTCTGAAAGAGGAATAAATACGAAACAAAGGGAGAGG | + |
|
Preference number: 1 (lower is better) Translates to: ARGPSGSGAQSVPGT*GPSERGINTKQRER Trigger: CCTCTCCCTTTGTTTCGTATTTATTCCTCTTTCAGAGGGACCCCAGGTTCCAGGGACCGACTGAGCCCCGGACCCGCTGGGGCCTCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR CCA 90 bp | GTTGGGAGCCTTGAAGGCCAGACATGGGGGTCAAGGTCCGAGTGGTaGCCAGAATGGACAAAGTGGGTGGGTGCGAAGGGAGATCCGATG | + |
|
Preference number: 1 (lower is better) Translates to: VGSLEGQTWGSRSEW*PEWTKWVGAKGDPM Trigger: CATCGGATCTCCCTTCGCACCCACCCACTTTGTCCATTCTGGCCACCACTCGGACCTTGACCCCCATGTCTGGCCTTCAAGGCTCCCAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR TCA 90 bp | CAGCGGGTCCGGGGCTCAGTCGGTCCCTGGAACCTGGGGTCCCTCTaGAAGAGGAATAAATACGAAACAAAGGGAGAGGCTCCAGAAGGG | + |
|
Preference number: 1 (lower is better) Translates to: QRVRGSVGPWNLGSL*KRNKYETKGEAPEG Trigger: CCCTTCTGGAGCCTCTCCCTTTGTTTCGTATTTATTCCTCTTTCAGAGGGACCCCAGGTTCCAGGGACCGACTGAGCCCCGGACCCGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR CCA 90 bp | CAGACATGGGGGTCAAGGTCCGAGTGGTGGCCAGAATGGACAAAGTaGGTGGGTGCGAAGGGAGATCCGATGCAGGAAATGAGTGGTGGG | + |
|
Preference number: 1 (lower is better) Translates to: QTWGSRSEWWPEWTK*VGAKGDPMQEMSGG Trigger: CCCACCACTCATTTCCTGCATCGGATCTCCCTTCGCACCCACCCACTTTGTCCATTCTGGCCACCACTCGGACCTTGACCCCCATGTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR CCA 90 bp | AGGCGAACCTGTAGTCCTGGGGCGAGGGAAAGTGCTCAGATAGTCTaGGAAATCGCAGCTCCAGGCCTGAGGCCTAGACAGGAACTTTCC | + |
|
Preference number: 1 (lower is better) Translates to: RRTCSPGARESAQIV*EIAAPGLRPRQELS Trigger: GGAAAGTTCCTGTCTAGGCCTCAGGCCTGGAGCTGCGATTTCCCAGACTATCTGAGCACTTTCCCTCGCCCCAGGACTACAGGTTCGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR TCA 90 bp | CATGGAGGGGCTCAGGAATGGACAGGCAGAGGACTCCAAGAGTGGTaGAGATTAGATTACGGTATGGGGACACACACACACATACACACA | + |
|
Preference number: 1 (lower is better) Translates to: HGGAQEWTGRGLQEW*RLDYGMGTHTHIHT Trigger: TGTGTGTATGTGTGTGTGTGTCCCCATACCGTAATCTAATCTTCACCACTCTTGGAGTCCTCTGCCTGTCCATTCCTGAGCCCCTCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR CCA 90 bp | CATACACACACACACACACGGAAATTCAGCAGAGACCCAAGGGATTaGACTGTGTGGACAGGGAAACTGAGGCAGATAGGAAATCAAGGG | + |
|
Preference number: 1 (lower is better) Translates to: HTHTHTRKFSRDPRD*TVWTGKLRQIGNQG Trigger: CCCTTGATTTCCTATCTGCCTCAGTTTCCCTGTCCACACAGTCCAATCCCTTGGGTCTCTGCTGAATTTCCGTGTGTGTGTGTGTGTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR CCA 90 bp | ACACACACACGGAAATTCAGCAGAGACCCAAGGGATTGGACTGTGTaGACAGGGAAACTGAGGCAGATAGGAAATCAAGGGTACATTTGG | + |
|
Preference number: 1 (lower is better) Translates to: THTRKFSRDPRDWTV*TGKLRQIGNQGYIW Trigger: CCAAATGTACCCTTGATTTCCTATCTGCCTCAGTTTCCCTGTCCACACAGTCCAATCCCTTGGGTCTCTGCTGAATTTCCGTGTGTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR CCA 90 bp | ACAGGGAAACTGAGGCAGATAGGAAATCAAGGGTACATTTGGGTTTaGATTGAGGGCTCCAATAGAGGAATGGCCAATGACTCTGCTGAG | + |
|
Preference number: 1 (lower is better) Translates to: TGKLRQIGNQGYIWV*IEGSNRGMANDSAE Trigger: CTCAGCAGAGTCATTGGCCATTCCTCTATTGGAGCCCTCAATCCAAACCCAAATGTACCCTTGATTTCCTATCTGCCTCAGTTTCCCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR CCA 90 bp | GTGTGGACAGGGAAACTGAGGCAGATAGGAAATCAAGGGTACATTTaGGTTTGGATTGAGGGCTCCAATAGAGGAATGGCCAATGACTCT | + |
|
Preference number: 1 (lower is better) Translates to: VWTGKLRQIGNQGYI*VWIEGSNRGMANDS Trigger: AGAGTCATTGGCCATTCCTCTATTGGAGCCCTCAATCCAAACCCAAATGTACCCTTGATTTCCTATCTGCCTCAGTTTCCCTGTCCACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR GCA 90 bp | ACGGCAAGGGAGGGTCCAAAAGATTTAGCATGCATGGGAAATTATTaGTGTCAGAAGTTCCTATTTACAGGGTCAGCACCCTCCAAAATT | + |
|
Preference number: 1 (lower is better) Translates to: TAREGPKDLACMGNY*CQKFLFTGSAPSKI Trigger: AATTTTGGAGGGTGCTGACCCTGTAAATAGGAACTTCTGACAGCAATAATTTCCCATGCATGCTAAATCTTTTGGACCCTCCCTTGCCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR-3UTR CCA 90 bp | CGGAGGTGTGTGCTTCGGTCCTCGCCCGGGCATGCAAAAGCGCGGTGGAGGAGGGAGAGGGCAGAGCCTTaGGCTGCCTCCCAAGTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: RRCVLRSSPGHAKARWRRERAEP*AASQVC Trigger: ACAGACTTGGGAGGCAGCCCAAGGCTCTGCCCTCTC...CCTCCTCCACCGCGCTTTTGCATGCCCGGGCGAGGACCGAAGCACACACCTCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR-3UTR TCA 90 bp | CGGAGGTGTGTGCTTCGGTCCTCGCCCGGGCATGCAAAAGCGCGGTGGAGGAGGTCGCAGCTCCAGGCCTaGGGCCTAGACAGGAACTTT | + |
|
Preference number: 2 (lower is better) Translates to: RRCVLRSSPGHAKARWRRSQLQA*GLDRNF Trigger: AAAGTTCCTGTCTAGGCCTCAGGCCTGGAGCTGCGA...CCTCCTCCACCGCGCTTTTGCATGCCCGGGCGAGGACCGAAGCACACACCTCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR-3UTR CCA 90 bp | CTTAAAGCAGAGGGGGCCGGGCAGGTGGGCGCGGAGGTGTGTGCTTCGGTCCTCCTTGAAGGCCAGACATaGGGGTCAAGGTCCGAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: LKAEGAGQVGAEVCASVLLEGQT*GSRSEW Trigger: CCACTCGGACCTTGACCCCCATGTCTGGCCTTCAAG...GAGGACCGAAGCACACACCTCCGCGCCCACCTGCCCGGCCCCCTCTGCTTTAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR-3UTR CCA 90 bp | CGGAGGTGTGTGCTTCGGTCCTCGCCCGGGCATGCAAAAGCGCGGTGGAGGAGGGGAGGGGCTCAGGAATaGACAGGCAGAGGACTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: RRCVLRSSPGHAKARWRRGGAQE*TGRGLQ Trigger: TTGGAGTCCTCTGCCTGTCCATTCCTGAGCCCCTCC...CCTCCTCCACCGCGCTTTTGCATGCCCGGGCGAGGACCGAAGCACACACCTCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR-3UTR CCA 90 bp | CTTAAAGCAGAGGGGGCCGGGCAGGTGGGCGCGGAGGTGTGTGCTTCGGTCCTCACTTCCCAGTCCAGCTaGGGAAGCCAGACAGTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: LKAEGAGQVGAEVCASVLTSQSS*GSQTVP Trigger: AGGGACTGTCTGGCTTCCCCAGCTGGACTGGGAAGT...GAGGACCGAAGCACACACCTCCGCGCCCACCTGCCCGGCCCCCTCTGCTTTAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR-3UTR TCA 90 bp | TCGGTCCTCGCCCGGGCATGCAAAAGCGCGGTGGAGGAGGTAGTGGTGGCCAATTACGGACCTGGTGCCTaGGTTGGGAGCCTTGAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: SVLARACKSAVEEVVVANYGPGA*VGSLEG Trigger: GCCTTCAAGGCTCCCAACTCAGGCACCAGGTCCGTA...ATTGGCCACCACTACCTCCTCCACCGCGCTTTTGCATGCCCGGGCGAGGACCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR-3UTR CCA 90 bp | GGGAACGCAGAGGGACGTGGAAAGAGGCGTGTGCTTAAAGCAGAGGGGGCCGGGTCCAGAAGGGCTTCCTaGGACAGGAGTGGAAGGCGC | + |
|
Preference number: 2 (lower is better) Translates to: GNAEGRGKRRVLKAEGAGSRRAS*DRSGRR Trigger: GCGCCTTCCACTCCTGTCCCAGGAAGCCCTTCTGGA...CCCGGCCCCCTCTGCTTTAAGCACACGCCTCTTTCCACGTCCCTCTGCGTTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR-3UTR TCA 90 bp | TCGGTCCTCGCCCGGGCATGCAAAAGCGCGGTGGAGGAGGTAGTGGTGGCCAATGGATGTGTCCATGGGTaGGGTGCTCCAGGCTGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: SVLARACKSAVEEVVVANGCVHG*GAPGCS Trigger: AGAACAGCCTGGAGCACCTCACCCATGGACACATCC...ATTGGCCACCACTACCTCCTCCACCGCGCTTTTGCATGCCCGGGCGAGGACCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR-3UTR CCA 90 bp | TCGGTCCTCGCCCGGGCATGCAAAAGCGCGGTGGAGGAGGTAGTGGTGGCCAATGAAGAGGTACGGACCTaGTGCCTGAGTTGGGAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: SVLARACKSAVEEVVVANEEVRT*CLSWEP Trigger: AGGCTCCCAACTCAGGCACCAGGTCCGTACCTCTTC...ATTGGCCACCACTACCTCCTCCACCGCGCTTTTGCATGCCCGGGCGAGGACCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR-3UTR CCA 90 bp | GGTGGGCGCGGAGGTGTGTGCTTCGGTCCTCGCCCGGGCATGCAAAAGCGCGGTCTACTAGTGGGAAGATaGAGCTGGAGAGAGCAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: GGRGGVCFGPRPGMQKRGLLVGR*SWREQD Trigger: ATCCTGCTCTCTCCAGCTCCATCTTCCCACTAGTAG...ACCGCGCTTTTGCATGCCCGGGCGAGGACCGAAGCACACACCTCCGCGCCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR CAA 90 bp | CCGGGACATGGAAGAGGTACGGACCTGGTGCCTGAGTTGGGAGCCTaGAAGGCCAGACATGGGGGTCAAGGTCCGAGTGGTGGCCAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: PGHGRGTDLVPELGA*KARHGGQGPSGGQN Trigger: ATTCTGGCCACCACTCGGACCTTGACCCCCATGTCTGGCCTTCAAGGCTCCCAACTCAGGCACCAGGTCCGTACCTCTTCCATGTCCCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR-3UTR CCA 90 bp | AAGCAGAGGGGGCCGGGCAGGTGGGCGCGGAGGTGTGTGCTTCGGTCCTCGCCCACTGATAATGTCAGGTaGAATCGTGTGTGTAAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: KQRGPGRWARRCVLRSSPTDNVR*NRVCKR Trigger: CCTCTTACACACACGATTCCACCTGACATTATCAGT...GGGCGAGGACCGAAGCACACACCTCCGCGCCCACCTGCCCGGCCCCCTCTGCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR-3UTR GCA 90 bp | TTACAGGGTCAGCACCCTCCAAAATTGCTTCTGGTGACCCCTCTCTCTCCCACCGTCCTCGCCCGGGCATaGAAAAGCGCGGTGGAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: LQGQHPPKLLLVTPLSPTVLARA*KSAVEE Trigger: CTCCTCCACCGCGCTTTTGCATGCCCGGGCGAGGAC...GGTGGGAGAGAGAGGGGTCACCAGAAGCAATTTTGGAGGGTGCTGACCCTGTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR-3UTR CCA 90 bp | CTTAAAGCAGAGGGGGCCGGGCAGGTGGGCGCGGAGGTGTGTGCTTCGGTCCTCGCTCCAATAGAGGAATaGCCAATGACTCTGCTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: LKAEGAGQVGAEVCASVLAPIEE*PMTLLR Trigger: TCTCAGCAGAGTCATTGGCCATTCCTCTATTGGAGC...GAGGACCGAAGCACACACCTCCGCGCCCACCTGCCCGGCCCCCTCTGCTTTAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGGGACGTGGAAAGAGGCGTGTGCTTAAAGCAGAGGGGGCCGGGCAGGTGGAGGGATTGGACTGTGTaGACAGGGAAACTGAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: QRDVERGVCLKQRGPGRWRDWTV*TGKLRQ Trigger: CTGCCTCAGTTTCCCTGTCCACACAGTCCAATCCCT...CCACCTGCCCGGCCCCCTCTGCTTTAAGCACACGCCTCTTTCCACGTCCCTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR CAA 90 bp | TTTGTGGCTAGGGGGAGGGGAAGGAGGTCTGAGTGTCCAGGACTTTaGCCCACAAAGGGAACGCAGAGGGACGTGGAAAGAGGCGTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: FVARGRGRRSECPGL*PTKGTQRDVERGVC Trigger: GCACACGCCTCTTTCCACGTCCCTCTGCGTTCCCTTTGTGGGCAAAAGTCCTGGACACTCAGACCTCCTTCCCCTCCCCCTAGCCACAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGGGACGTGGAAAGAGGCGTGTGCTTAAAGCAGAGGGGGCCGGGCAGGTGGAGAGACCCAAGGGATTaGACTGTGTGGACAGGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: QRDVERGVCLKQRGPGRWRDPRD*TVWTGK Trigger: TTTCCCTGTCCACACAGTCCAATCCCTTGGGTCTCT...CCACCTGCCCGGCCCCCTCTGCTTTAAGCACACGCCTCTTTCCACGTCCCTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGGGACGTGGAAAGAGGCGTGTGCTTAAAGCAGAGGGGGCCGGGCAGGTGGAGGAAAACTGAGGACTaGGAGCTACTAGTGGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: QRDVERGVCLKQRGPGRWRKTED*ELLVGR Trigger: TCTTCCCACTAGTAGCTCCCAGTCCTCAGTTTTCCT...CCACCTGCCCGGCCCCCTCTGCTTTAAGCACACGCCTCTTTCCACGTCCCTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR-3UTR CCA 90 bp | TTACAGGGTCAGCACCCTCCAAAATTGCTTCTGGTGACCCCTCTCTCTCCCACCCTTCCTCCTGGAGCCTaGGGCCTAACGAAGCTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: LQGQHPPKLLLVTPLSPTLPPGA*GLTKLH Trigger: GTGGAGCTTCGTTAGGCCCCAGGCTCCAGGAGGAAG...GGTGGGAGAGAGAGGGGTCACCAGAAGCAATTTTGGAGGGTGCTGACCCTGTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR CAA 90 bp | AACCCTAGAGAGCAACCTGGAGCGGTCTGCAATCTCCACCCTCTTTaGTGGCTAGGGGGAGGGGAAGGAGGTCTGAGTGTCCAGGACTTT | + |
|
Preference number: 2 (lower is better) Translates to: NPREQPGAVCNLHPL*WLGGGEGGLSVQDF Trigger: AAAGTCCTGGACACTCAGACCTCCTTCCCCTCCCCCTAGCCACAAAAGAGGGTGGAGATTGCAGACCGCTCCAGGTTGCTCTCTAGGGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR-3UTR GCA 90 bp | TTACAGGGTCAGCACCCTCCAAAATTGCTTCTGGTGACCCCTCTCTCTCCCACCTGTCCATGGGTGAGGTaGTCCAGGCTGTTCTCTAGC | + |
|
Preference number: 2 (lower is better) Translates to: LQGQHPPKLLLVTPLSPTCPWVR*SRLFSS Trigger: GCTAGAGAACAGCCTGGAGCACCTCACCCATGGACA...GGTGGGAGAGAGAGGGGTCACCAGAAGCAATTTTGGAGGGTGCTGACCCTGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR-3UTR CCA 90 bp | AAAGATCTAGTTAAGGAGCACAGCCTAGAGTCGGGGCCGGAGAAACTTCCAGCGAATGGACAAAGTGGGTaGGTGCGAAGGGAGATCCGA | + |
|
Preference number: 2 (lower is better) Translates to: KDLVKEHSLESGPEKLPANGQSG*VRREIR Trigger: TCGGATCTCCCTTCGCACCCACCCACTTTGTCCATT...CGCTGGAAGTTTCTCCGGCCCCGACTCTAGGCTGTGCTCCTTAACTAGATCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR-3UTR CCA 90 bp | AAAGATCTAGTTAAGGAGCACAGCCTAGAGTCGGGGCCGGAGAAACTTCCAGCGTCAAGGTCCGAGTGGTaGCCAGAATGGACAAAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: KDLVKEHSLESGPEKLPASRSEW*PEWTKW Trigger: CCACTTTGTCCATTCTGGCCACCACTCGGACCTTGA...CGCTGGAAGTTTCTCCGGCCCCGACTCTAGGCTGTGCTCCTTAACTAGATCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR-3UTR CCA 90 bp | AGGGGCTCAGGAATGGACAGGCAGAGGACTCCAAGAGTGGTGAAGATTAGATTACCAGAATGGACAAAGTaGGTGGGTGCGAAGGGAGAT | + |
|
Preference number: 2 (lower is better) Translates to: RGSGMDRQRTPRVVKIRLPEWTK*VGAKGD Trigger: ATCTCCCTTCGCACCCACCCACTTTGTCCATTCTGG...TAATCTAATCTTCACCACTCTTGGAGTCCTCTGCCTGTCCATTCCTGAGCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR CAA 90 bp | ATTGCTGTCAGAAGTTCCTATTTACAGGGTCAGCACCCTCCAAAATaGCTTCTGGTGACCCCTCTCTCTCCCACCATCTCTGCAGACTTC | + |
|
Preference number: 2 (lower is better) Translates to: IAVRSSYLQGQHPPK*LLVTPLSPTISADF Trigger: GAAGTCTGCAGAGATGGTGGGAGAGAGAGGGGTCACCAGAAGCAATTTTGGAGGGTGCTGACCCTGTAAATAGGAACTTCTGACAGCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR-3UTR TCA 90 bp | AGACCCAAGGGATTGGACTGTGTGGACAGGGAAACTGAGGCAGATAGGAAATCAGGTTCAGTCGGGGGTTaGAAAGAAAGTTCTAGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: RPKGLDCVDRETEADRKSGSVGG*KESSRP Trigger: TGGCCTAGAACTTTCTTTTCAACCCCCGACTGAACC...TGATTTCCTATCTGCCTCAGTTTCCCTGTCCACACAGTCCAATCCCTTGGGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR CAA 90 bp | ACATACACACACACACACACGGAAATTCAGCAGAGACCCAAGGGATaGGACTGTGTGGACAGGGAAACTGAGGCAGATAGGAAATCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: TYTHTHTEIQQRPKG*DCVDRETEADRKSR Trigger: CCTTGATTTCCTATCTGCCTCAGTTTCCCTGTCCACACAGTCCAATCCCTTGGGTCTCTGCTGAATTTCCGTGTGTGTGTGTGTGTATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR-3UTR TCA 90 bp | ATAGAGGAATGGCCAATGACTCTGCTGAGAAATGAAAAGAAAGATCTAGTTAAGCTGAGTTGGGAGCCTTaGAGGCCAGACATGGGGGTC | + |
|
Preference number: 2 (lower is better) Translates to: IEEWPMTLLRNEKKDLVKLSWEP*RPDMGV Trigger: GACCCCCATGTCTGGCCTTCAAGGCTCCCAACTCAG...CTTAACTAGATCTTTCTTTTCATTTCTCAGCAGAGTCATTGGCCATTCCTCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR-3UTR CCA 90 bp | ATAGAGGAATGGCCAATGACTCTGCTGAGAAATGAAAAGAAAGATCTAGTTAAGGCAGGAAATGAGTGGTaGGTTCAGTCGGGGGTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: IEEWPMTLLRNEKKDLVKAGNEW*VQSGVE Trigger: TTCAACCCCCGACTGAACCCACCACTCATTTCCTGC...CTTAACTAGATCTTTCTTTTCATTTCTCAGCAGAGTCATTGGCCATTCCTCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR GCA 72 bp | AGCAGAGGGGGCCGGGCAGGTGGGCGCGGAGGTGTGTaGTTCGGTCCTCGCCCGGGCATGCAAAAGCGCGGT | + |
|
Preference number: 3 (lower is better) Translates to: SRGGRAGGRGGV*FGPRPGMQKRG Trigger: ACCGCGCTTTTGCATGCCCGGGCGAGGACCGAAGCACACACCTCCGCGCCCACCTGCCCGGCCCCCTCTGCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR CCA 72 bp | CCGAGGGCGCAGGCAGGGGAGACGCAGACTGAGGGGTaGGAGAGAAGCCTCGGCGGGCATCCCGCATGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: PRAQAGETQTEG*ERSLGGHPAWQ Trigger: CTGCCATGCGGGATGCCCGCCGAGGCTTCTCTCCCACCCCTCAGTCTGCGTCTCCCCTGCCTGCGCCCTCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR GCA 72 bp | CTGGCTGGCAGTCCCGGCCCCTCTGCCCGGGAGAGTTaGATAGTCGTGGCCGGGAGAGAGCACTCCTCCCGG | + |
|
Preference number: 3 (lower is better) Translates to: LAGSPGPSARES*IVVAGREHSSR Trigger: CCGGGAGGAGTGCTCTCTCCCGGCCACGACTATGCAACTCTCCCGGGCAGAGGGGCCGGGACTGCCAGCCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR GCA 72 bp | GGCGCGGAGGTGTGTGCTTCGGTCCTCGCCCGGGCATaGAAAAGCGCGGTGGAGGAGGTAGTGGTGGCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: GAEVCASVLARA*KSAVEEVVVAN Trigger: ATTGGCCACCACTACCTCCTCCACCGCGCTTTTGCATGCCCGGGCGAGGACCGAAGCACACACCTCCGCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR-3UTR CAA 90 bp | CGTGGAAAGAGGCGTGTGCTTAAAGCAGAGGGGGCCGGGCAGGTGGGCGCGGAGCAGCGACGGACGGCCTaGCTGACTCTACCCTTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: RGKRRVLKAEGAGQVGAEQRRTA*LTLPFD Trigger: GTCAAAGGGTAGAGTCAGCAAGGCCGTCCGTCGCTG...CTCCGCGCCCACCTGCCCGGCCCCCTCTGCTTTAAGCACACGCCTCTTTCCACG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR GCA 72 bp | ACAAAGGGAACGCAGAGGGACGTGGAAAGAGGCGTGTaGTTAAAGCAGAGGGGGCCGGGCAGGTGGGCGCGG | + |
|
Preference number: 3 (lower is better) Translates to: TKGTQRDVERGV*LKQRGPGRWAR Trigger: CCGCGCCCACCTGCCCGGCCCCCTCTGCTTTAAGCACACGCCTCTTTCCACGTCCCTCTGCGTTCCCTTTGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR CCA 72 bp | GCGGAAGGGGCCCTGCCGGACGAGGGGATGTGTCCATaGGTGAGGTGCTCCAGGCTGTTCTCTAGCAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: AEGALPDEGMCP*VRCSRLFSSKG Trigger: GCCTTTGCTAGAGAACAGCCTGGAGCACCTCACCCATGGACACATCCCCTCGTCCGGCAGGGCCCCTTCCGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR TCA 72 bp | AAGGGGCCCTGCCGGACGAGGGGATGTGTCCATGGGTaGGGTGCTCCAGGCTGTTCTCTAGCAAAGGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: KGPCRTRGCVHG*GAPGCSLAKAE Trigger: CTCTGCCTTTGCTAGAGAACAGCCTGGAGCACCTCACCCATGGACACATCCCCTCGTCCGGCAGGGCCCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR TCA 72 bp | GAAGAGGTACGGACCTGGTGCCTGAGTTGGGAGCCTTaGAGGCCAGACATGGGGGTCAAGGTCCGAGTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: EEVRTWCLSWEP*RPDMGVKVRVV Trigger: CACCACTCGGACCTTGACCCCCATGTCTGGCCTTCAAGGCTCCCAACTCAGGCACCAGGTCCGTACCTCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR TCA 72 bp | ATAAGGGGAGGAGCAGCCAGCGACGGACGGCCTTGCTaGCTCTACCCTTTGACTTCCCAGTCCAGCTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: IRGGAASDGRPC*LYPLTSQSSWG Trigger: TCCCCAGCTGGACTGGGAAGTCAAAGGGTAGAGTCAGCAAGGCCGTCCGTCGCTGGCTGCTCCTCCCCTTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR CCA 72 bp | CTCTCCCACCATCTCTGCAGACTTCCTCCTGGAGCCTaGGGCCTAACGAAGCTCCACCCCTCCGAAACCCTA | + |
|
Preference number: 3 (lower is better) Translates to: LSHHLCRLPPGA*GLTKLHPSETL Trigger: TAGGGTTTCGGAGGGGTGGAGCTTCGTTAGGCCCCAGGCTCCAGGAGGAAGTCTGCAGAGATGGTGGGAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR CCA 72 bp | TGTAGTCCTGGGGCGAGGGAAAGTGCTCAGATAGTCTaGGAAATCGCAGCTCCAGGCCTGAGGCCTAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: CSPGARESAQIV*EIAAPGLRPRQ Trigger: CTGTCTAGGCCTCAGGCCTGGAGCTGCGATTTCCCAGACTATCTGAGCACTTTCCCTCGCCCCAGGACTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR CCA 72 bp | CCCAGCGGGTCCGGGGCTCAGTCGGTCCCTGGAACCTaGGGTCCCTCTGAAAGAGGAATAAATACGAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: PSGSGAQSVPGT*GPSERGINTKQ Trigger: TTGTTTCGTATTTATTCCTCTTTCAGAGGGACCCCAGGTTCCAGGGACCGACTGAGCCCCGGACCCGCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR TCA 72 bp | CGGGGCTCAGTCGGTCCCTGGAACCTGGGGTCCCTCTaGAAGAGGAATAAATACGAAACAAAGGGAGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RGSVGPWNLGSL*KRNKYETKGEA Trigger: AGCCTCTCCCTTTGTTTCGTATTTATTCCTCTTTCAGAGGGACCCCAGGTTCCAGGGACCGACTGAGCCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR CCA 72 bp | GGGTGCGAAGGGAGATCCGATGCAGGAAATGAGTGGTaGGTTCAGTCGGGGGTTGAAAAGAAAGTTCTAGGC | + |
|
Preference number: 3 (lower is better) Translates to: GCEGRSDAGNEW*VQSGVEKKVLG Trigger: GCCTAGAACTTTCTTTTCAACCCCCGACTGAACCCACCACTCATTTCCTGCATCGGATCTCCCTTCGCACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR CCA 72 bp | CTCCCAAGTCTGTTCCCAGCTAGGAAAACTGAGGACTaGGAGCTACTAGTGGGAAGATGGAGCTGGAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LPSLFPARKTED*ELLVGRWSWRE Trigger: CTCTCTCCAGCTCCATCTTCCCACTAGTAGCTCCCAGTCCTCAGTTTTCCTAGCTGGGAACAGACTTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR CCA 72 bp | TGTCTGATGAGATCCGGGAGGACTGATAATGTCAGGTaGAATCGTGTGTGTAAGAGGCTGGACCTAAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: CLMRSGRTDNVR*NRVCKRLDLRP Trigger: GGGCCTTAGGTCCAGCCTCTTACACACACGATTCCACCTGACATTATCAGTCCTCCCGGATCTCATCAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR TCA 72 bp | GCTCAGGAATGGACAGGCAGAGGACTCCAAGAGTGGTaGAGATTAGATTACGGTATGGGGACACACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: AQEWTGRGLQEW*RLDYGMGTHTH Trigger: GTGTGTGTGTGTCCCCATACCGTAATCTAATCTTCACCACTCTTGGAGTCCTCTGCCTGTCCATTCCTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR CCA 72 bp | ACACACACACGGAAATTCAGCAGAGACCCAAGGGATTaGACTGTGTGGACAGGGAAACTGAGGCAGATAGGA | + |
|
Preference number: 3 (lower is better) Translates to: THTRKFSRDPRD*TVWTGKLRQIG Trigger: TCCTATCTGCCTCAGTTTCCCTGTCCACACAGTCCAATCCCTTGGGTCTCTGCTGAATTTCCGTGTGTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR GCA 72 bp | GAGGGTCCAAAAGATTTAGCATGCATGGGAAATTATTaGTGTCAGAAGTTCCTATTTACAGGGTCAGCACCC | + |
|
Preference number: 3 (lower is better) Translates to: EGPKDLACMGNY*CQKFLFTGSAP Trigger: GGGTGCTGACCCTGTAAATAGGAACTTCTGACAGCAATAATTTCCCATGCATGCTAAATCTTTTGGACCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| CDS-3UTR GCA 90 bp | CAGGCAGGGGAGACGCAGACTGAGGGGTGGGAGAGAAGCCTCGGCGGGCATCCCGCCGCACTCTGCGCATaGGTGCCGGTGCCCGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QAGETQTEGWERSLGGHPAALCA*VPVPAS Trigger: GGAGGCGGGCACCGGCACGCATGCGCAGAGTGCGGC...GGGATGCCCGCCGAGGCTTCTCTCCCACCCCTCAGTCTGCGTCTCCCCTGCCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR CAA 72 bp | CCTGGCTGGCAGTCCCGGCCCCTCTGCCCGGGAGAGTaGCATAGTCGTGGCCGGGAGAGAGCACTCCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PGWQSRPLCPGE*HSRGRERALLP Trigger: CGGGAGGAGTGCTCTCTCCCGGCCACGACTATGCAACTCTCCCGGGCAGAGGGGCCGGGACTGCCAGCCAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| CDS-3UTR TCA 90 bp | GTGGAAAGAGGCGTGTGCTTAAAGCAGAGGGGGCCGGGCAGGTGGGCGCGGAGGGGCAGCGGTAGTGCTTaGAGGCCGAGTGCGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VERGVCLKQRGPGRWARRGSGSA*RPSASA Trigger: TGCAGACGCACTCGGCCTTCAAGCACTACCGCTGCC...CCTCCGCGCCCACCTGCCCGGCCCCCTCTGCTTTAAGCACACGCCTCTTTCCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| CDS-3UTR GCA 90 bp | GTGGGTGCGAAGGGAGATCCGATGCAGGAAATGAGTGGTGGGTTCAGTCGGGGGCGTCTTGCCGCACTCTaGGCATGCGTGCCGGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VGAKGDPMQEMSGGFSRGRLAAL*ACVPVP Trigger: GGGCACCGGCACGCATGCGCAGAGTGCGGCAAGACG...CCCCCGACTGAACCCACCACTCATTTCCTGCATCGGATCTCCCTTCGCACCCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| CDS-3UTR TCA 90 bp | CTTAAAGCAGAGGGGGCCGGGCAGGTGGGCGCGGAGGTGTGTGCTTCGGTCCTCAACGCCCGTCAGAGATaGAGAAGGCGTCCATGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LKAEGAGQVGAEVCASVLNARQR*RRRPWS Trigger: ACTCCATGGACGCCTTCTTCATCTCTGACGGGCGTT...GAGGACCGAAGCACACACCTCCGCGCCCACCTGCCCGGCCCCCTCTGCTTTAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| CDS-3UTR GCA 90 bp | AAAGATCTAGTTAAGGAGCACAGCCTAGAGTCGGGGCCGGAGAAACTTCCAGCGCACTCTGCGCATGCGTaGCGGTGCCCGCCTCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: KDLVKEHSLESGPEKLPAHSAHA*RCPPPA Trigger: GGCGGGAGGCGGGCACCGGCACGCATGCGCAGAGTG...CGCTGGAAGTTTCTCCGGCCCCGACTCTAGGCTGTGCTCCTTAACTAGATCTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| CDS-3UTR CCA 90 bp | TTACAGGGTCAGCACCCTCCAAAATTGCTTCTGGTGACCCCTCTCTCTCCCACCAGCGCGCCGACAGGCTaGACTGTGGGCTCTCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LQGQHPPKLLLVTPLSPTSAPTG*TVGSRG Trigger: ACCCCGAGAGCCCACAGTCCAGCCTGTCGGCGCGCT...GGTGGGAGAGAGAGGGGTCACCAGAAGCAATTTTGGAGGGTGCTGACCCTGTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR CAA 72 bp | ACCCATAAGGGGAGGAGCAGCCAGCGACGGACGGCCTaGCTGACTCTACCCTTTGACTTCCCAGTCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: THKGRSSQRRTA*LTLPFDFPVQL Trigger: CAGCTGGACTGGGAAGTCAAAGGGTAGAGTCAGCAAGGCCGTCCGTCGCTGGCTGCTCCTCCCCTTATGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| CDS-3UTR TCA 90 bp | AAAGATCTAGTTAAGGAGCACAGCCTAGAGTCGGGGCCGGAGAAACTTCCAGCGGGCGCAGGTTGTGCGTaGGCACGTGCATGGCGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: KDLVKEHSLESGPEKLPAGAGCA*ARAWRA Trigger: CGCTCGCCATGCACGTGCTCACGCACAACCTGCGCC...CGCTGGAAGTTTCTCCGGCCCCGACTCTAGGCTGTGCTCCTTAACTAGATCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| CDS-3UTR GCA 90 bp | TGGGGGTACGGCAAGGGAGGGTCCAAAAGATTTAGCATGCATGGGAAATTATTGCCGGAGGCCCGCGGGTaGCAGGCAGCACGTAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WGYGKGGSKRFSMHGKLLPEARG*QAARRQ Trigger: CTGCCTACGTGCTGCCTGGCACCCGCGGGCCTCCGG...CAATAATTTCCCATGCATGCTAAATCTTTTGGACCCTCCCTTGCCGTACCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| CDS-3UTR GCA 90 bp | TTACAGGGTCAGCACCCTCCAAAATTGCTTCTGGTGACCCCTCTCTCTCCCACCTTGTGCGTGAGCACGTaGATGGCGAGCGCGGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LQGQHPPKLLLVTPLSPTLCVST*MASAGM Trigger: CATGCCCGCGCTCGCCATGCACGTGCTCACGCACAA...GGTGGGAGAGAGAGGGGTCACCAGAAGCAATTTTGGAGGGTGCTGACCCTGTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR CAA 72 bp | AGGGGGAGGGGAAGGAGGTCTGAGTGTCCAGGACTTTaGCCCACAAAGGGAACGCAGAGGGACGTGGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RGRGRRSECPGL*PTKGTQRDVER Trigger: TCTTTCCACGTCCCTCTGCGTTCCCTTTGTGGGCAAAAGTCCTGGACACTCAGACCTCCTTCCCCTCCCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| CDS-3UTR CCA 90 bp | AAAGATCTAGTTAAGGAGCACAGCCTAGAGTCGGGGCCGGAGAAACTTCCAGCGGACACCCCGCTGCACTaGAAGCCATCCGCTTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: KDLVKEHSLESGPEKLPADTPLH*KPSALI Trigger: GATCAAAGCGGATGGCTTCCAGTGCAGCGGGGTGTC...CGCTGGAAGTTTCTCCGGCCCCGACTCTAGGCTGTGCTCCTTAACTAGATCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| CDS-3UTR CCA 90 bp | AGACCCAAGGGATTGGACTGTGTGGACAGGGAAACTGAGGCAGATAGGAAATCACGACAGGCTGGACTGTaGGCTCTCGGGGTCGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RPKGLDCVDRETEADRKSRQAGL*ALGVAV Trigger: TACAGCGACCCCGAGAGCCCACAGTCCAGCCTGTCG...TGATTTCCTATCTGCCTCAGTTTCCCTGTCCACACAGTCCAATCCCTTGGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| 3UTR CAA 72 bp | CACACACACACGGAAATTCAGCAGAGACCCAAGGGATaGGACTGTGTGGACAGGGAAACTGAGGCAGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: HTHTEIQQRPKG*DCVDRETEADR Trigger: CCTATCTGCCTCAGTTTCCCTGTCCACACAGTCCAATCCCTTGGGTCTCTGCTGAATTTCCGTGTGTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| CDS-3UTR CCA 90 bp | ATAGAGGAATGGCCAATGACTCTGCTGAGAAATGAAAAGAAAGATCTAGTTAAGTGGCGAGCGCGGGCATaGACACGTAGGCCTTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: IEEWPMTLLRNEKKDLVKWRARA*TRRPCR Trigger: GCGGCAAGGCCTACGTGTCCATGCCCGCGCTCGCCA...CTTAACTAGATCTTTCTTTTCATTTCTCAGCAGAGTCATTGGCCATTCCTCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| CDS CCA 90 bp | CACGGCCGCCTCCCCGCGGAAGTAGCGCGCCGACAGGCTGGACTGTaGGCTCTCGGGGTCGCTGTACTCTTCGGACGCCGCGGCCGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: HGRLPAEVARRQAGL*ALGVAVLFGRRGRV Trigger: TACCCGGCCGCGGCGTCCGAAGAGTACAGCGACCCCGAGAGCCCACAGTCCAGCCTGTCGGCGCGCTACTTCCGCGGGGAGGCGGCCGTG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| CDS CCA 90 bp | TGTCGGTCACGGCCGCCTCCCCGCGGAAGTAGCGCGCCGACAGGCTaGACTGTGGGCTCTCGGGGTCGCTGTACTCTTCGGACGCCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: CRSRPPPRGSSAPTG*TVGSRGRCTLRTPR Trigger: CCGCGGCGTCCGAAGAGTACAGCGACCCCGAGAGCCCACAGTCCAGCCTGTCGGCGCGCTACTTCCGCGGGGAGGCGGCCGTGACCGACA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| CDS GCA 90 bp | GCAGACAGTGCGCCACATAACCGTTGTCCCCCGGAGGCCCGCGGGTaGCAGGCAGCACGTAGGCAGTCTCCAGGGGGTGGTAGGTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ADSAPHNRCPPEARG*QAARRQSPGGGRWG Trigger: CCCCCACCTACCACCCCCTGGAGACTGCCTACGTGCTGCCTGGCACCCGCGGGCCTCCGGGGGACAACGGTTATGTGGCGCACTGTCTGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| CDS CCA 90 bp | CGGGCGCCAGCTCCAGCCCAGGCTTCTGCTCGCCATCGTAACCGCTaGGGGGCAGACAGTGCGCCACATAACCGTTGTCCCCCGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RAPAPAQASARHRNR*GADSAPHNRCPPEA Trigger: GGCCTCCGGGGGACAACGGTTATGTGGCGCACTGTCTGCCCCCCAGCGGTTACGATGGCGAGCAGAAGCCTGGGCTGGAGCTGGCGCCCG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| CDS-3UTR CAA 90 bp | TGGGGGTACGGCAAGGGAGGGTCCAAAAGATTTAGCATGCATGGGAAATTATTGTTGAGCGCGAAGCTCTaGTCGCACTGGCGGCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: WGYGKGGSKRFSMHGKLLLSAKL*SHWRQR Trigger: CCGCTGCCGCCAGTGCGACAAGAGCTTCGCGCTCAA...CAATAATTTCCCATGCATGCTAAATCTTTTGGACCCTCCCTTGCCGTACCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| CDS CCA 72 bp | CGGCCGCCTCCCCGCGGAAGTAGCGCGCCGACAGGCTaGACTGTGGGCTCTCGGGGTCGCTGTACTCTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: RPPPRGSSAPTG*TVGSRGRCTLR Trigger: CCGAAGAGTACAGCGACCCCGAGAGCCCACAGTCCAGCCTGTCGGCGCGCTACTTCCGCGGGGAGGCGGCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| CDS GCA 72 bp | GCGCCACATAACCGTTGTCCCCCGGAGGCCCGCGGGTaGCAGGCAGCACGTAGGCAGTCTCCAGGGGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: APHNRCPPEARG*QAARRQSPGGG Trigger: ACCACCCCCTGGAGACTGCCTACGTGCTGCCTGGCACCCGCGGGCCTCCGGGGGACAACGGTTATGTGGCGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||
| CDS CCA 72 bp | CTCCCCGCGGAAGTAGCGCGCCGACAGGCTGGACTGTaGGCTCTCGGGGTCGCTGTACTCTTCGGACGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LPAEVARRQAGL*ALGVAVLFGRR Trigger: GCGGCGTCCGAAGAGTACAGCGACCCCGAGAGCCCACAGTCCAGCCTGTCGGCGCGCTACTTCCGCGGGGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064061.4 |
||