Pregenerated sensors for SCRT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048385Ensembl transcript IDs: ENSMUST00000096365.5, ENSMUST00000164703.2
Found 179 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TATGGGGGCGGGAGGGGGCCCATGGCTTTCCACGGCGGCAGGGTGTaGGCGAAGCGGGAGATCCTGGCGGGCCCACAGCCCTTCCAGCCT | + |
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Preference number: 1 (lower is better) Translates to: YGGGRGPMAFHGGRV*AKREILAGPQPFQP Trigger: AGGCTGGAAGGGCTGTGGGCCCGCCAGGATCTCCCGCTTCGCCCACACCCTGCCGCCGTGGAAAGCCATGGGCCCCCTCCCGCCCCCATA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR TCA 90 bp | CGCCTGATATCCTGCTCCTCCTCCGGCCAGCTGCCCGAGTGGAGCTaGCTCCCTGGACGCCGGACTGAAGGCTTGGCCTGGAAGGCTTGG | + |
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Preference number: 1 (lower is better) Translates to: RLISCSSSGQLPEWS*LPGRRTEGLAWKAW Trigger: CCAAGCCTTCCAGGCCAAGCCTTCAGTCCGGCGTCCAGGGAGTCAGCTCCACTCGGGCAGCTGGCCGGAGGAGGAGCAGGATATCAGGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096365.5 |
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| 3UTR GCA 90 bp | GAGCGGGCAGCCCCGGGAAGGGTTGGGAAGAAGGGTGGGACTGCATaGAGTGATGTCACAAAGGCGGCGGCCAATGGAGCGGGGCCCTTG | + |
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Preference number: 1 (lower is better) Translates to: ERAAPGRVGKKGGTA*SDVTKAAANGAGPL Trigger: CAAGGGCCCCGCTCCATTGGCCGCCGCCTTTGTGACATCACTGCATGCAGTCCCACCCTTCTTCCCAACCCTTCCCGGGGCTGCCCGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR CCA 90 bp | TTCCATCCCAGCCTCTGGAACCATGACGCCTGCCGGGCTCTGCCCTaGGGTAGGGTATGGGGAAAGAAAGTCTGCGTGGCCGGCCCCGCG | + |
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Preference number: 1 (lower is better) Translates to: FHPSLWNHDACRALP*GRVWGKKVCVAGPA Trigger: CGCGGGGCCGGCCACGCAGACTTTCTTTCCCCATACCCTACCCCAGGGCAGAGCCCGGCAGGCGTCATGGTTCCAGAGGCTGGGATGGAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR GCA 90 bp | GCAAAGCAAATACAGAGGTGTGTAGAGGGCAGTGGCACGCCAGCCTaGCGGCCCGGGCATCCGTCCTCCAACACCCGAAGCCTGGGGAGC | + |
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Preference number: 1 (lower is better) Translates to: AKQIQRCVEGSGTPA*RPGHPSSNTRSLGS Trigger: GCTCCCCAGGCTTCGGGTGTTGGAGGACGGATGCCCGGGCCGGCAGGCTGGCGTGCCACTGCCCTCTACACACCTCTGTATTTGCTTTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR CCA 90 bp | GGGGGCTTTACCCGCAAAGCAAATACAGAGGTGTGTAGAGGGCAGTaGCACGCCAGCCTGCCGGCCCGGGCATCCGTCCTCCAACACCCG | + |
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Preference number: 1 (lower is better) Translates to: GGFTRKANTEVCRGQ*HASLPARASVLQHP Trigger: CGGGTGTTGGAGGACGGATGCCCGGGCCGGCAGGCTGGCGTGCCACTGCCCTCTACACACCTCTGTATTTGCTTTGCGGGTAAAGCCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR TCA 90 bp | GATTTGGCAGAGGATGCGAGGCGTGGGTTGGAGGGAGGCTCGGACTaGGGCCCTAGAAAGAACCCGAGGAAGAGGGTTGCCGCCGTCCGC | + |
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Preference number: 1 (lower is better) Translates to: DLAEDARRGLEGGSD*GPRKNPRKRVAAVR Trigger: GCGGACGGCGGCAACCCTCTTCCTCGGGTTCTTTCTAGGGCCTCAGTCCGAGCCTCCCTCCAACCCACGCCTCGCATCCTCTGCCAAATC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096365.5 |
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| 3UTR TCA 90 bp | GGCAGCCCCGGGAAGGGTTGGGAAGAAGGGTGGGACTGCATGCAGTaGTGTCACAAAGGCGGCGGCCAATGGAGCGGGGCCCTTGGGATA | + |
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Preference number: 1 (lower is better) Translates to: GSPGKGWEEGWDCMQ*CHKGGGQWSGALGI Trigger: TATCCCAAGGGCCCCGCTCCATTGGCCGCCGCCTTTGTGACATCACTGCATGCAGTCCCACCCTTCTTCCCAACCCTTCCCGGGGCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR CCA 90 bp | GGCCAATGGAGCGGGGCCCTTGGGATAGGGTCACCGCCGAGGCTTTaGCATAGACGGGTGAAAGTTGGCAACCGAGTGGGAGTGGGGCCT | + |
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Preference number: 1 (lower is better) Translates to: GQWSGALGIGSPPRL*HRRVKVGNRVGVGP Trigger: AGGCCCCACTCCCACTCGGTTGCCAACTTTCACCCGTCTATGCCAAAGCCTCGGCGGTGACCCTATCCCAAGGGCCCCGCTCCATTGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR GCA 90 bp | TACCATTCCATCCCAGCCTCTGGAACCATGACGCCTGCCGGGCTCTaGCCTGGGGTAGGGTATGGGGAAAGAAAGTCTGCGTGGCCGGCC | + |
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Preference number: 1 (lower is better) Translates to: YHSIPASGTMTPAGL*PGVGYGERKSAWPA Trigger: GGCCGGCCACGCAGACTTTCTTTCCCCATACCCTACCCCAGGGCAGAGCCCGGCAGGCGTCATGGTTCCAGAGGCTGGGATGGAATGGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR CCA 90 bp | CGGGCTGGAAGAATTAGGATTTGGCAGAGGATGCGAGGCGTGGGTTaGAGGGAGGCTCGGACTGAGGCCCTAGAAAGAACCCGAGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: RAGRIRIWQRMRGVG*REARTEALERTRGR Trigger: TCTTCCTCGGGTTCTTTCTAGGGCCTCAGTCCGAGCCTCCCTCCAACCCACGCCTCGCATCCTCTGCCAAATCCTAATTCTTCCAGCCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096365.5 |
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| 3UTR TCA 90 bp | TCTGCCTTCCACCCTGGCCTACCTATGCGTATTGGGCCCTGTCACTaGTGGGCACCTCCAGAAGGTTGCCACATCTCTGACGGATTCAGG | + |
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Preference number: 1 (lower is better) Translates to: SAFHPGLPMRIGPCH*WAPPEGCHISDGFR Trigger: CCTGAATCCGTCAGAGATGTGGCAACCTTCTGGAGGTGCCCATCAGTGACAGGGCCCAATACGCATAGGTAGGCCAGGGTGGAAGGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR GCA 90 bp | GGCTGCGGCAGCTTCACATGCAGTGCGCATTATTGCTCTATAGTCTaGATCGGACTAACTAAGAGGAAGGGGAGCGGGCAGCCCCGGGAA | + |
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Preference number: 1 (lower is better) Translates to: GCGSFTCSAHYCSIV*IGLTKRKGSGQPRE Trigger: TTCCCGGGGCTGCCCGCTCCCCTTCCTCTTAGTTAGTCCGATGCAGACTATAGAGCAATAATGCGCACTGCATGTGAAGCTGCCGCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR CCA 90 bp | CACCCCCTGTCTTCAGAGACCCAACTAAGAGATGAGGTTCGGTTCTaGGTCTGGTCGACCCTATTGCTGGGAGAAAGCCTGGGGCACCCT | + |
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Preference number: 1 (lower is better) Translates to: HPLSSETQLRDEVRF*VWSTLLLGESLGHP Trigger: AGGGTGCCCCAGGCTTTCTCCCAGCAATAGGGTCGACCAGACCCAGAACCGAACCTCATCTCTTAGTTGGGTCTCTGAAGACAGGGGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR GCA 90 bp | ATGCTAGGCCTGCGGGTCCGCACCAGGAGGGTTAGCCAAGCTTGGTaGTGGGTTGAGACTGGCCATATCATATACTCCAGCATGTTGCAC | + |
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Preference number: 1 (lower is better) Translates to: MLGLRVRTRRVSQAW*WVETGHIIYSSMLH Trigger: GTGCAACATGCTGGAGTATATGATATGGCCAGTCTCAACCCAGCACCAAGCTTGGCTAACCCTCCTGGTGCGGACCCGCAGGCCTAGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR CCA 90 bp | CTAGGCCTGCGGGTCCGCACCAGGAGGGTTAGCCAAGCTTGGTGCTaGGTTGAGACTGGCCATATCATATACTCCAGCATGTTGCACCTT | + |
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Preference number: 1 (lower is better) Translates to: LGLRVRTRRVSQAWC*VETGHIIYSSMLHL Trigger: AAGGTGCAACATGCTGGAGTATATGATATGGCCAGTCTCAACCCAGCACCAAGCTTGGCTAACCCTCCTGGTGCGGACCCGCAGGCCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR TCA 90 bp | ATCCCTGATCTAGGGGCCTATGGGATGGGTAGGGCAGGGGATACCTaGTTCTCAGTAACTCTAGAGGCTGCGGCAGCTTCACATGCAGTG | + |
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Preference number: 1 (lower is better) Translates to: IPDLGAYGMGRAGDT*FSVTLEAAAASHAV Trigger: CACTGCATGTGAAGCTGCCGCAGCCTCTAGAGTTACTGAGAATCAGGTATCCCCTGCCCTACCCATCCCATAGGCCCCTAGATCAGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR TCA 90 bp | TATCTCAGGGAATCAGAAAATGGGTACCTGTATGGGTGGCCCTGGTaGAGCTGGGCCCCAGAGACCCTGGGACCTGTCCAATTTGAGCTG | + |
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Preference number: 1 (lower is better) Translates to: YLRESENGYLYGWPW*SWAPETLGPVQFEL Trigger: CAGCTCAAATTGGACAGGTCCCAGGGTCTCTGGGGCCCAGCTTCACCAGGGCCACCCATACAGGTACCCATTTTCTGATTCCCTGAGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR GCA 90 bp | CCTAAACGTTCCTTCTACCTGAATTCGCTAAGTCGGTTATTGTGCTaGTTAGTTATGGGGGCGGGAGGGGGCCCATGGCTTTCCACGGCG | + |
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Preference number: 1 (lower is better) Translates to: PKRSFYLNSLSRLLC*LVMGAGGGPWLSTA Trigger: CGCCGTGGAAAGCCATGGGCCCCCTCCCGCCCCCATAACTAAGCAGCACAATAACCGACTTAGCGAATTCAGGTAGAAGGAACGTTTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR TCA 90 bp | CCTTACCTCACCTCACCCCCTGTCTTCAGAGACCCAACTAAGAGATaGGGTTCGGTTCTGGGTCTGGTCGACCCTATTGCTGGGAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: PYLTSPPVFRDPTKR*GSVLGLVDPIAGRK Trigger: CTTTCTCCCAGCAATAGGGTCGACCAGACCCAGAACCGAACCTCATCTCTTAGTTGGGTCTCTGAAGACAGGGGGTGAGGTGAGGTAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR TCA 90 bp | TCCAATTTGAGCTGGGAACATAAGGCCCAAGTCAAAGGCAGAGCCTaGCTACACCCAGCGTATTCTAGGACTGAGGTGGGTAGGAGAGGC | + |
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Preference number: 1 (lower is better) Translates to: SNLSWEHKAQVKGRA*LHPAYSRTEVGRRG Trigger: GCCTCTCCTACCCACCTCAGTCCTAGAATACGCTGGGTGTAGTCAGGCTCTGCCTTTGACTTGGGCCTTATGTTCCCAGCTCAAATTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR GCA 90 bp | CTACCTAAACGTTCCTTCTACCTGAATTCGCTAAGTCGGTTATTGTaGTGCTTAGTTATGGGGGCGGGAGGGGGCCCATGGCTTTCCACG | + |
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Preference number: 1 (lower is better) Translates to: LPKRSFYLNSLSRLL*CLVMGAGGGPWLST Trigger: CGTGGAAAGCCATGGGCCCCCTCCCGCCCCCATAACTAAGCAGCACAATAACCGACTTAGCGAATTCAGGTAGAAGGAACGTTTAGGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR GCA 90 bp | AGTAACTCTAGAGGCTGCGGCAGCTTCACATGCAGTGCGCATTATTaGTCTATAGTCTGCATCGGACTAACTAAGAGGAAGGGGAGCGGG | + |
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Preference number: 1 (lower is better) Translates to: SNSRGCGSFTCSAHY*SIVCIGLTKRKGSG Trigger: CCCGCTCCCCTTCCTCTTAGTTAGTCCGATGCAGACTATAGAGCAATAATGCGCACTGCATGTGAAGCTGCCGCAGCCTCTAGAGTTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR GCA 90 bp | GGATACCTGATTCTCAGTAACTCTAGAGGCTGCGGCAGCTTCACATaGAGTGCGCATTATTGCTCTATAGTCTGCATCGGACTAACTAAG | + |
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Preference number: 1 (lower is better) Translates to: GYLILSNSRGCGSFT*SAHYCSIVCIGLTK Trigger: CTTAGTTAGTCCGATGCAGACTATAGAGCAATAATGCGCACTGCATGTGAAGCTGCCGCAGCCTCTAGAGTTACTGAGAATCAGGTATCC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR-3UTR TCA 90 bp | CACGCCAGCCTGCCGGCCCGGGCATCCGTCCTCCAACACCCGAAGCCTGGGGAGGGGGGCCCGTATTGCTaGGAGCCGACCTGGCTGGCG | + |
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Preference number: 2 (lower is better) Translates to: HASLPARASVLQHPKPGEGGPYC*EPTWLA Trigger: CGCCAGCCAGGTCGGCTCTCAGCAATACGGGCCCCC...CTCCCCAGGCTTCGGGTGTTGGAGGACGGATGCCCGGGCCGGCAGGCTGGCGTG 73% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR-3UTR TCA 90 bp | CCCGGGCATCCGTCCTCCAACACCCGAAGCCTGGGGAGCGAGGGAGGGGGCCCGCAGGACCCTATTGCTTaGAGGGGCTGGCAAGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: PGHPSSNTRSLGSEGGGPQDPIA*RGWQGS Trigger: GGAGCCTTGCCAGCCCCTTCAAGCAATAGGGTCCTG...CGGGCCCCCTCCCTCGCTCCCCAGGCTTCGGGTGTTGGAGGACGGATGCCCGGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGCGCCTCTGTGTGCGTGTGCATGCGGCACAGGCTGGCAGGCCCAGGCTAGGGCTCCCTGCCCCTATTaGTGTGAGGAGGGGCCCGCC | + |
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Preference number: 2 (lower is better) Translates to: WAPLCACACGTGWQAQARAPCPY*CEEGPA Trigger: GGCGGGCCCCTCCTCACAGCAATAGGGGCAGGGAGC...CCTAGCCTGGGCCTGCCAGCCTGTGCCGCATGCACACGCACACAGAGGCGCCCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTGGGCCTCCAGGAAAGGGCCGGCCTCGGGGGCAGAGGAAGTGGTCCTGGACGTGGGGCCGGCTCCCTaGCCCTATTGCTGTGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: AWASRKGPASGAEEVVLDVGPAP*PYCCEE Trigger: CTCCTCACAGCAATAGGGGCAGGGAGCCGGCCCCAC...GTCCAGGACCACTTCCTCTGCCCCCGAGGCCGGCCCTTTCCTGGAGGCCCAGGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGCGGAAGAGGGACACGGCCCGAGTAAAAATCCCGGCCTGTTGCGGGCCAGGCTGTGTGCGTGTGCATaGGGCACAGGCTGGCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: GAEEGHGPSKNPGLLRARLCACA*GTGWQA Trigger: GGCCTGCCAGCCTGTGCCGCATGCACACGCACACAG...CCTGGCCCGCAACAGGCCGGGATTTTTACTCGGGCCGTGTCCCTCTTCCGCCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGCGCCTCTGTGTGCGTGTGCATGCGGCACAGGCTGGCAGGCCCAGGCTAGGAAAGGCGGCGGCCAATaGAGCGGGGCCCTTGGGATA | + |
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Preference number: 2 (lower is better) Translates to: WAPLCACACGTGWQAQARKGGGQ*SGALGI Trigger: TATCCCAAGGGCCCCGCTCCATTGGCCGCCGCCTTT...CCTAGCCTGGGCCTGCCAGCCTGTGCCGCATGCACACGCACACAGAGGCGCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGCGCCTCTGTGTGCGTGTGCATGCGGCACAGGCTGGCAGGCCCAGGCTAGGTGGGACTGCATGCAGTaGTGTCACAAAGGCGGCGGC | + |
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Preference number: 2 (lower is better) Translates to: WAPLCACACGTGWQAQARWDCMQ*CHKGGG Trigger: GCCGCCGCCTTTGTGACATCACTGCATGCAGTCCCA...CCTAGCCTGGGCCTGCCAGCCTGTGCCGCATGCACACGCACACAGAGGCGCCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTGTAGAGGGCAGTGGCACGCCAGCCTGCCGGCCCGGGCATCCGTCCTCCAAGAAGACCTGAGTCTCTaGAACGCGATCCAGGGGCGC | + |
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Preference number: 2 (lower is better) Translates to: VCRGQWHASLPARASVLQEDLSL*NAIQGR Trigger: GCGCCCCTGGATCGCGTTGCAGAGACTCAGGTCTTC...TTGGAGGACGGATGCCCGGGCCGGCAGGCTGGCGTGCCACTGCCCTCTACACAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096365.5 |
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| 3UTR-3UTR CCA 90 bp | TGCCGGCCCGGGCATCCGTCCTCCAACACCCGAAGCCTGGGGAGCGAGGGAGGGGTTCGGTTCTGGGTCTaGTCGACCCTATTGCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: CRPGHPSSNTRSLGSEGGVRFWV*STLLLG Trigger: TCCCAGCAATAGGGTCGACCAGACCCAGAACCGAAC...CCCTCCCTCGCTCCCCAGGCTTCGGGTGTTGGAGGACGGATGCCCGGGCCGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCATGCAGTGATGTCACAAAGGCGGCGGCCAATGGAGCGGGGCCCTTGGGATGCTCCCTGCCCCTATTaGTGTGAGGAGGGGCCCGCC | + |
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Preference number: 2 (lower is better) Translates to: LHAVMSQRRRPMERGPWDAPCPY*CEEGPA Trigger: GGCGGGCCCCTCCTCACAGCAATAGGGGCAGGGAGC...ATCCCAAGGGCCCCGCTCCATTGGCCGCCGCCTTTGTGACATCACTGCATGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTGCGGGTCCGCACCAGGAGGGTTAGCCAAGCTTGGTGCTGGGTTGAGACTGTGGGGAAAGAAAGTCTaGGTGGCCGGCCCCGCGCAG | + |
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Preference number: 2 (lower is better) Translates to: ACGSAPGGLAKLGAGLRLWGKKV*VAGPAQ Trigger: CTGCGCGGGGCCGGCCACGCAGACTTTCTTTCCCCA...CAGTCTCAACCCAGCACCAAGCTTGGCTAACCCTCCTGGTGCGGACCCGCAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR-3UTR CCA 90 bp | CGGCGCTCCGAGGAGCTGGTGCTATTGTGCTTAGGAAGGAGGTCTGTCCGTCCGGTGTGTAGAGGGCAGTaGCACGCCAGCCTGCCGGCC | + |
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Preference number: 2 (lower is better) Translates to: RRSEELVLLCLGRRSVRPVCRGQ*HASLPA Trigger: GGCCGGCAGGCTGGCGTGCCACTGCCCTCTACACAC...CGGACGGACAGACCTCCTTCCTAAGCACAATAGCACCAGCTCCTCGGAGCGCCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCATGCAGTGATGTCACAAAGGCGGCGGCCAATGGAGCGGGGCCCTTGGGATGTGTGTAGAGGGCAGTaGCACGCCAGCCTGCCGGCC | + |
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Preference number: 2 (lower is better) Translates to: LHAVMSQRRRPMERGPWDVCRGQ*HASLPA Trigger: GGCCGGCAGGCTGGCGTGCCACTGCCCTCTACACAC...ATCCCAAGGGCCCCGCTCCATTGGCCGCCGCCTTTGTGACATCACTGCATGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGGATTCAGCCCTCTGCATCTGCCTTCCACCCTGGCCTACCTATGCGTATTGAGTGGCACGCCAGCCTaGCGGCCCGGGCATCCGTCC | + |
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Preference number: 2 (lower is better) Translates to: QGFSPLHLPSTLAYLCVLSGTPA*RPGHPS Trigger: GGACGGATGCCCGGGCCGGCAGGCTGGCGTGCCACT...CAATACGCATAGGTAGGCCAGGGTGGAAGGCAGATGCAGAGGGCTGAATCCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR-3UTR TCA 90 bp | CGGCGCTCCGAGGAGCTGGTGCTATTGTGCTTAGGAAGGAGGTCTGTCCGTCCGGGGGTGGGGAAGACCTaGGTCTCTGCAACGCGATCC | + |
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Preference number: 2 (lower is better) Translates to: RRSEELVLLCLGRRSVRPGVGKT*VSATRS Trigger: GGATCGCGTTGCAGAGACTCAGGTCTTCCCCACCCC...CGGACGGACAGACCTCCTTCCTAAGCACAATAGCACCAGCTCCTCGGAGCGCCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096365.5 |
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| 3UTR-3UTR TCA 90 bp | GGATTCAGCCCTCTGCATCTGCCTTCCACCCTGGCCTACCTATGCGTATTGGGCTCGGCGCCCCCTCCCTaGCCCGAGTGCAATCCGTTC | + |
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Preference number: 2 (lower is better) Translates to: GFSPLHLPSTLAYLCVLGSAPPP*PECNPF Trigger: GAACGGATTGCACTCGGGTCAGGGAGGGGGCGCCGA...GCCCAATACGCATAGGTAGGCCAGGGTGGAAGGCAGATGCAGAGGGCTGAATCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGCGCCTCTGTGTGCGTGTGCATGCGGCACAGGCTGGCAGGCCCAGGCTAGGTTTGGCATAGACGGGTaGAAGTTGGCAACCGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: WAPLCACACGTGWQAQARFGIDG*KLATEW Trigger: CCACTCGGTTGCCAACTTTCACCCGTCTATGCCAAA...CCTAGCCTGGGCCTGCCAGCCTGTGCCGCATGCACACGCACACAGAGGCGCCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGCCCTCTGCATCTGCCTTCCACCCTGGCCTACCTATGCGTATTGGGCCCTGTGGGGAAAGAAAGTCTaGGTGGCCGGCCCCGCGCAG | + |
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Preference number: 2 (lower is better) Translates to: SALCICLPPWPTYAYWALWGKKV*VAGPAQ Trigger: CTGCGCGGGGCCGGCCACGCAGACTTTCTTTCCCCA...CAGGGCCCAATACGCATAGGTAGGCCAGGGTGGAAGGCAGATGCAGAGGGCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGCAGAGCCTGACTACACCCAGCGTATTCTAGGACTGAGGTGGGTAGGAGAGGGGGGCCCGTATTGCTaGGAGCCGACCTGGCTGGCG | + |
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Preference number: 2 (lower is better) Translates to: KAEPDYTQRILGLRWVGEGGPYC*EPTWLA Trigger: CGCCAGCCAGGTCGGCTCTCAGCAATACGGGCCCCC...CTCTCCTACCCACCTCAGTCCTAGAATACGCTGGGTGTAGTCAGGCTCTGCCTT 62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGCTGGTGCTATTGTGCTTAGGAAGGAGGTCTGTCCGTCCGTCCGTCTGTCCTATGGGTGGCCCTGGTaGAGCTGGGCCCCAGAGACC | + |
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Preference number: 2 (lower is better) Translates to: GAGAIVLRKEVCPSVRLSYGWPW*SWAPET Trigger: GGTCTCTGGGGCCCAGCTTCACCAGGGCCACCCATA...GGACAGACGGACGGACGGACAGACCTCCTTCCTAAGCACAATAGCACCAGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGCGGAAGAGGGACACGGCCCGAGTAAAAATCCCGGCCTGTTGCGGGCCAGGAAGGGTGGGACTGCATaGAGTGATGTCACAAAGGCG | + |
|
Preference number: 2 (lower is better) Translates to: GAEEGHGPSKNPGLLRARKGGTA*SDVTKA Trigger: CGCCTTTGTGACATCACTGCATGCAGTCCCACCCTT...CCTGGCCCGCAACAGGCCGGGATTTTTACTCGGGCCGTGTCCCTCTTCCGCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCTGCGGGTCCGCACCAGGAGGGTTAGCCAAGCTTGGTGCTGGGTTGAGACTGCAGCGGAGATTTCCCTaGGGGCCCGTATTGCTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: ACGSAPGGLAKLGAGLRLQRRFP*GPVLLR Trigger: TCTCAGCAATACGGGCCCCCAGGGAAATCTCCGCTG...CAGTCTCAACCCAGCACCAAGCTTGGCTAACCCTCCTGGTGCGGACCCGCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTGGTCCTGGACAGCCTAAGCCCCGGGCGTCGGCGGGAAGGATGAGGGTTCGGGATGAGGTTCGGTTCTaGGTCTGGTCGACCCTATTG | + |
|
Preference number: 2 (lower is better) Translates to: SGPGQPKPRASAGRMRVRDEVRF*VWSTLL Trigger: CAATAGGGTCGACCAGACCCAGAACCGAACCTCATC...CCGAACCCTCATCCTTCCCGCCGACGCCCGGGGCTTAGGCTGTCCAGGACCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGGTTGGGAAGAAGGGTGGGACTGCATGCAGTGATGTCACAAAGGCGGCGGCCATGCGAGGCGTGGGTTaGAGGGAGGCTCGGACTGAG | + |
|
Preference number: 2 (lower is better) Translates to: RVGKKGGTACSDVTKAAAMRGVG*REARTE Trigger: CTCAGTCCGAGCCTCCCTCCAACCCACGCCTCGCAT...GGCCGCCGCCTTTGTGACATCACTGCATGCAGTCCCACCCTTCTTCCCAACCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096365.5 |
||
| 3UTR-3UTR CCA 90 bp | AGTGGTCCTGGACAGCCTAAGCCCCGGGCGTCGGCGGGAAGGATGAGGGTTCGGGGAAGAATTAGGATTTaGCAGAGGAGGGAGGAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: SGPGQPKPRASAGRMRVRGRIRI*QRREEG Trigger: GCCCTCCTCCCTCCTCTGCCAAATCCTAATTCTTCC...CCGAACCCTCATCCTTCCCGCCGACGCCCGGGGCTTAGGCTGTCCAGGACCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164703.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGAGGGTTAGCCAAGCTTGGTGCTGGGTTGAGACTGGCCATATCATATACTCCCGTCGGCGGGAAGGATaGGGGTTCGGCGCCCCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: RRVSQAWCWVETGHIIYSRRREG*GFGAPS Trigger: GGAGGGGGCGCCGAACCCTCATCCTTCCCGCCGACG...GGAGTATATGATATGGCCAGTCTCAACCCAGCACCAAGCTTGGCTAACCCTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGGTTGGGAAGAAGGGTGGGACTGCATGCAGTGATGTCACAAAGGCGGCGGCCGGTCGACCCTATTGCTaGGAGAAAGCCTGGGGCACC | + |
|
Preference number: 2 (lower is better) Translates to: RVGKKGGTACSDVTKAAAGRPYC*EKAWGT Trigger: GGTGCCCCAGGCTTTCTCCCAGCAATAGGGTCGACC...GGCCGCCGCCTTTGTGACATCACTGCATGCAGTCCCACCCTTCTTCCCAACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR CCA 90 bp | CGAGGAGCTGGTGCTATTGTGCTTAGGAAGGAGGTCTGTCCGTCCGTCCGTCTGAAGTTGGCAACCGAGTaGGAGTGGGGCCTGGGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: RGAGAIVLRKEVCPSVRLKLATE*EWGLGL Trigger: GAGGCCCAGGCCCCACTCCCACTCGGTTGCCAACTT...CAGACGGACGGACGGACAGACCTCCTTCCTAAGCACAATAGCACCAGCTCCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR CCA 90 bp | GACACGGCCCGAGTAAAAATCCCGGCCTGTTGCGGGCCAGGAGTATGTACAAGGAGCCCCGGGAAGGGTTaGGAAGAAGGGTGGGACTGC | + |
|
Preference number: 2 (lower is better) Translates to: DTARVKIPACCGPGVCTRSPGKG*EEGWDC Trigger: GCAGTCCCACCCTTCTTCCCAACCCTTCCCGGGGCT...CCTTGTACATACTCCTGGCCCGCAACAGGCCGGGATTTTTACTCGGGCCGTGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCTGCATCTGCCTTCCACCCTGGCCTACCTATGCGTATTGGGCCCTGTCACTGGAAAGAAAGTCTGCGTaGCCGGCCCCGCGCAGCATC | + |
|
Preference number: 2 (lower is better) Translates to: LCICLPPWPTYAYWALSLERKSA*PAPRSI Trigger: GATGCTGCGCGGGGCCGGCCACGCAGACTTTCTTTC...CAGTGACAGGGCCCAATACGCATAGGTAGGCCAGGGTGGAAGGCAGATGCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR GCA 90 bp | GACACGGCCCGAGTAAAAATCCCGGCCTGTTGCGGGCCAGGAGTATGTACAAGGTCAGCCCTCTGCATCTaGCTTCCACCCTGGCCTACC | + |
|
Preference number: 2 (lower is better) Translates to: DTARVKIPACCGPGVCTRSALCI*LPPWPT Trigger: GGTAGGCCAGGGTGGAAGGCAGATGCAGAGGGCTGA...CCTTGTACATACTCCTGGCCCGCAACAGGCCGGGATTTTTACTCGGGCCGTGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGCATGCAGTGATGTCACAAAGGCGGCGGCCAATGGAGCGGGGCCCTTGGGATGTTCGGTTCTGGGTCTaGTCGACCCTATTGCTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: LHAVMSQRRRPMERGPWDVRFWV*STLLLG Trigger: TCCCAGCAATAGGGTCGACCAGACCCAGAACCGAAC...ATCCCAAGGGCCCCGCTCCATTGGCCGCCGCCTTTGTGACATCACTGCATGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGGCAGAGCCTGACTACACCCAGCGTATTCTAGGACTGAGGTGGGTAGGAGAGGCAACCGAGTGGGAGTaGGGCCTGGGCCTCCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: KAEPDYTQRILGLRWVGEATEWE*GLGLQE Trigger: TTCCTGGAGGCCCAGGCCCCACTCCCACTCGGTTGC...CTCTCCTACCCACCTCAGTCCTAGAATACGCTGGGTGTAGTCAGGCTCTGCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR TCA 90 bp | CGAGGAGCTGGTGCTATTGTGCTTAGGAAGGAGGTCTGTCCGTCCGTCCGTCTGATTGGGCCCTGTCACTaGTGGGCACCTCCAGAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: RGAGAIVLRKEVCPSVRLIGPCH*WAPPEG Trigger: ACCTTCTGGAGGTGCCCATCAGTGACAGGGCCCAAT...CAGACGGACGGACGGACAGACCTCCTTCCTAAGCACAATAGCACCAGCTCCTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR GCA 90 bp | CGAGGAGCTGGTGCTATTGTGCTTAGGAAGGAGGTCTGTCCGTCCGTCCGTCTGTCTGGTCGACCCTATTaGTGGGAGAAAGCCTGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: RGAGAIVLRKEVCPSVRLSGRPY*WEKAWG Trigger: GCCCCAGGCTTTCTCCCAGCAATAGGGTCGACCAGA...CAGACGGACGGACGGACAGACCTCCTTCCTAAGCACAATAGCACCAGCTCCTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR CAA 90 bp | GCCTGCGGGTCCGCACCAGGAGGGTTAGCCAAGCTTGGTGCTGGGTaGAGACTGGCCATATCATATACTCCAGCATGTTGCACCTTAGCG | + |
|
Preference number: 2 (lower is better) Translates to: ACGSAPGGLAKLGAG*RLAISYTPACCTLA Trigger: CGCTAAGGTGCAACATGCTGGAGTATATGATATGGCCAGTCTCAACCCAGCACCAAGCTTGGCTAACCCTCCTGGTGCGGACCCGCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR GCA 90 bp | TCAGCCCTCTGCATCTGCCTTCCACCCTGGCCTACCTATGCGTATTGGGCCCTGGAGGTTTGCAAAGCCTaGGGAACAGAACGCCTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: SALCICLPPWPTYAYWALEVCKA*GTERLC Trigger: ACAGAGGCGTTCTGTTCCGCAGGCTTTGCAAACCTC...CAGGGCCCAATACGCATAGGTAGGCCAGGGTGGAAGGCAGATGCAGAGGGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096365.5 |
||
| 3UTR-3UTR GCA 90 bp | TCAGCCCTCTGCATCTGCCTTCCACCCTGGCCTACCTATGCGTATTGGGCCCTGAAGGGTGGGACTGCATaGAGTGATGTCACAAAGGCG | + |
|
Preference number: 2 (lower is better) Translates to: SALCICLPPWPTYAYWALKGGTA*SDVTKA Trigger: CGCCTTTGTGACATCACTGCATGCAGTCCCACCCTT...CAGGGCCCAATACGCATAGGTAGGCCAGGGTGGAAGGCAGATGCAGAGGGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGGCGCCTCTGTGTGCGTGTGCATGCGGCACAGGCTGGCAGGCCCAGGCTAGGTATTGCTCTATAGTCTaGATCGGACTAACTAAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: WAPLCACACGTGWQAQARYCSIV*IGLTKR Trigger: CCTCTTAGTTAGTCCGATGCAGACTATAGAGCAATA...CCTAGCCTGGGCCTGCCAGCCTGTGCCGCATGCACACGCACACAGAGGCGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR GCA 90 bp | TGCGGCAGCTTCACATGCAGTGCGCATTATTGCTCTATAGTCTGCATCGGACTAGTGGGGCCGGCTCCCTaGCCCTATTGCTGTGAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: CGSFTCSAHYCSIVCIGLVGPAP*PYCCEE Trigger: CTCCTCACAGCAATAGGGGCAGGGAGCCGGCCCCAC...TAGTCCGATGCAGACTATAGAGCAATAATGCGCACTGCATGTGAAGCTGCCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR CCA 90 bp | CAATGGAGCGGGGCCCTTGGGATAGGGTCACCGCCGAGGCTTTGGCATAGACGGCATTATTATTCGTTATaGAGGACAGAGCCCCGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: QWSGALGIGSPPRLWHRRHYYSL*RTEPRK Trigger: CTTCCGGGGCTCTGTCCTCCATAACGAATAATAATG...CCGTCTATGCCAAAGCCTCGGCGGTGACCCTATCCCAAGGGCCCCGCTCCATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGCATTTTGCCAGGTGGAGTAAGGGGGTTAGATATGGGCACTGTTATGCTAGGCAGGACCCTATTGCTTaGAGGGGCTGGCAAGGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: GHFARWSKGVRYGHCYARQDPIA*RGWQGS Trigger: GGAGCCTTGCCAGCCCCTTCAAGCAATAGGGTCCTG...CCTAGCATAACAGTGCCCATATCTAACCCCCTTACTCCACCTGGCAAAATGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR GCA 90 bp | CGGCGCTCCGAGGAGCTGGTGCTATTGTGCTTAGGAAGGAGGTCTGTCCGTCCGGGTCGGATAAGTTCATaGGATTCCGATATGCGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: RRSEELVLLCLGRRSVRPGRISS*DSDMRH Trigger: ATGACGCATATCGGAATCGCATGAACTTATCCGACC...CGGACGGACAGACCTCCTTCCTAAGCACAATAGCACCAGCTCCTCGGAGCGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR GCA 90 bp | GACACGGCCCGAGTAAAAATCCCGGCCTGTTGCGGGCCAGGAGTATGTACAAGGAGTAACTCTAGAGGCTaGGGCAGCTTCACATGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: DTARVKIPACCGPGVCTRSNSRG*GSFTCS Trigger: ACTGCATGTGAAGCTGCCGCAGCCTCTAGAGTTACT...CCTTGTACATACTCCTGGCCCGCAACAGGCCGGGATTTTTACTCGGGCCGTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR CCA 90 bp | CCAGGAGGGTTAGCCAAGCTTGGTGCTGGGTTGAGACTGGCCATATCATATACTAAGCCTGGGGCACCCTaGAGGAGAGGGGAGGGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: PGGLAKLGAGLRLAISYTKPGAP*RRGEGF Trigger: AAAACCCTCCCCTCTCCTCCAGGGTGCCCCAGGCTT...AGTATATGATATGGCCAGTCTCAACCCAGCACCAAGCTTGGCTAACCCTCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGCATGCAGTGATGTCACAAAGGCGGCGGCCAATGGAGCGGGGCCCTTGGGATCATTATTATTCGTTATaGAGGACAGAGCCCCGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: LHAVMSQRRRPMERGPWDHYYSL*RTEPRK Trigger: CTTCCGGGGCTCTGTCCTCCATAACGAATAATAATG...ATCCCAAGGGCCCCGCTCCATTGGCCGCCGCCTTTGTGACATCACTGCATGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGCATTTTGCCAGGTGGAGTAAGGGGGTTAGATATGGGCACTGTTATGCTAGGCAGCGGAGATTTCCCTaGGGGCCCGTATTGCTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: GHFARWSKGVRYGHCYARQRRFP*GPVLLR Trigger: TCTCAGCAATACGGGCCCCCAGGGAAATCTCCGCTG...CCTAGCATAACAGTGCCCATATCTAACCCCCTTACTCCACCTGGCAAAATGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCGAGGAGCTGGTGCTATTGTGCTTAGGAAGGAGGTCTGTCCGTCCGTCCGTCCTGTCCAATTTGAGCTaGGAACATAAGGCCCAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: SEELVLLCLGRRSVRPSVLSNLS*EHKAQV Trigger: GACTTGGGCCTTATGTTCCCAGCTCAAATTGGACAG...GACGGACGGACGGACAGACCTCCTTCCTAAGCACAATAGCACCAGCTCCTCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR CAA 90 bp | GTGCTACCTAAACGTTCCTTCTACCTGAATTCGCTAAGTCGGTTATaGTGCTGCTTAGTTATGGGGGCGGGAGGGGGCCCATGGCTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: VLPKRSFYLNSLSRL*CCLVMGAGGGPWLS Trigger: GGAAAGCCATGGGCCCCCTCCCGCCCCCATAACTAAGCAGCACAATAACCGACTTAGCGAATTCAGGTAGAAGGAACGTTTAGGTAGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTCTGAGTAGGTCGGATAAGTTCATGCGATTCCGATATGCGTCATTATTATTCCTGCCCCTATTGCTGTaGGGAGGGGCCCGCCCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: GLSRSDKFMRFRYASLLFLPLLL*GGARPP Trigger: TGGAGGGCGGGCCCCTCCTCACAGCAATAGGGGCAG...GAATAATAATGACGCATATCGGAATCGCATGAACTTATCCGACCTACTCAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR TCA 90 bp | CCAGGAGGGTTAGCCAAGCTTGGTGCTGGGTTGAGACTGGCCATATCATATACTGACCCAACTAAGAGATaGGGTTCGGTTCTGGGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: PGGLAKLGAGLRLAISYTDPTKR*GSVLGL Trigger: CAGACCCAGAACCGAACCTCATCTCTTAGTTGGGTC...AGTATATGATATGGCCAGTCTCAACCCAGCACCAAGCTTGGCTAACCCTCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR TCA 90 bp | TGCGGCAGCTTCACATGCAGTGCGCATTATTGCTCTATAGTCTGCATCGGACTAGACCCAACTAAGAGATaGGGTTCGGTTCTGGGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: CGSFTCSAHYCSIVCIGLDPTKR*GSVLGL Trigger: CAGACCCAGAACCGAACCTCATCTCTTAGTTGGGTC...TAGTCCGATGCAGACTATAGAGCAATAATGCGCACTGCATGTGAAGCTGCCGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGCATTTTGCCAGGTGGAGTAAGGGGGTTAGATATGGGCACTGTTATGCTAGGAGGGCAGGGGATACCTaGTTCTCAGTAACTCTAGAG | + |
|
Preference number: 2 (lower is better) Translates to: GHFARWSKGVRYGHCYARRAGDT*FSVTLE Trigger: CTCTAGAGTTACTGAGAATCAGGTATCCCCTGCCCT...CCTAGCATAACAGTGCCCATATCTAACCCCCTTACTCCACCTGGCAAAATGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGTCCGCACCAGGAGGGTTAGCCAAGCTTGGTGCTGGGTTGAGACTGGCCATACATGCGATTCCGATATaGGTCATTATTATTCGTTAT | + |
|
Preference number: 2 (lower is better) Translates to: GSAPGGLAKLGAGLRLAIHAIPI*VIIIRY Trigger: ATAACGAATAATAATGACGCATATCGGAATCGCATG...TATGGCCAGTCTCAACCCAGCACCAAGCTTGGCTAACCCTCCTGGTGCGGACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTAGGTCGGATAAGTTCATGCGATTCCGATATGCGTCATTATTATTCGTTATGAAGCCTGGGGCACCCTaGAGGAGAGGGGAGGGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: SRSDKFMRFRYASLLFVMKPGAP*RRGEGF Trigger: AAAACCCTCCCCTCTCCTCCAGGGTGCCCCAGGCTT...CATAACGAATAATAATGACGCATATCGGAATCGCATGAACTTATCCGACCTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR CCA 72 bp | GGGAGGGGGCCCATGGCTTTCCACGGCGGCAGGGTGTaGGCGAAGCGGGAGATCCTGGCGGGCCCACAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: GRGPMAFHGGRV*AKREILAGPQP Trigger: GGGCTGTGGGCCCGCCAGGATCTCCCGCTTCGCCCACACCCTGCCGCCGTGGAAAGCCATGGGCCCCCTCCC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR CCA 72 bp | CCAGCCCCTCCGCCCGGACGCCAGCGGAGATTTCCCTaGGGGCCCGTATTGCTGAGAGCCGACCTGGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: PAPPPGRQRRFP*GPVLLRADLAG Trigger: GCCAGCCAGGTCGGCTCTCAGCAATACGGGCCCCCAGGGAAATCTCCGCTGGCGTCCGGGCGGAGGGGCTGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR TCA 72 bp | TCCTGCTCCTCCTCCGGCCAGCTGCCCGAGTGGAGCTaGCTCCCTGGACGCCGGACTGAAGGCTTGGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SCSSSGQLPEWS*LPGRRTEGLAW Trigger: CCAGGCCAAGCCTTCAGTCCGGCGTCCAGGGAGTCAGCTCCACTCGGGCAGCTGGCCGGAGGAGGAGCAGGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096365.5 |
||
| 3UTR CCA 72 bp | CATGACGCCTGCCGGGCTCTGCCCTGGGGTAGGGTATaGGGAAAGAAAGTCTGCGTGGCCGGCCCCGCGCAG | + |
|
Preference number: 3 (lower is better) Translates to: HDACRALPWGRV*GKKVCVAGPAQ Trigger: CTGCGCGGGGCCGGCCACGCAGACTTTCTTTCCCCATACCCTACCCCAGGGCAGAGCCCGGCAGGCGTCATG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR CCA 72 bp | TCCACGGCGGCAGGGTGTGGGCGAAGCGGGAGATCCTaGCGGGCCCACAGCCCTTCCAGCCTTCTCCATAGG | + |
|
Preference number: 3 (lower is better) Translates to: STAAGCGRSGRS*RAHSPSSLLHR Trigger: CCTATGGAGAAGGCTGGAAGGGCTGTGGGCCCGCCAGGATCTCCCGCTTCGCCCACACCCTGCCGCCGTGGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR GCA 72 bp | ATACAGAGGTGTGTAGAGGGCAGTGGCACGCCAGCCTaGCGGCCCGGGCATCCGTCCTCCAACACCCGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: IQRCVEGSGTPA*RPGHPSSNTRS Trigger: GCTTCGGGTGTTGGAGGACGGATGCCCGGGCCGGCAGGCTGGCGTGCCACTGCCCTCTACACACCTCTGTAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGTGTAGAGGGCAGTGGCACGCCAGCCTGCCGGCCCGGGCATCCGTCCTCCAATCAGGACCCTATTGCTaGAAGGGGCTGGCAAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: VCRGQWHASLPARASVLQSGPYC*KGLARL Trigger: GAGCCTTGCCAGCCCCTTCAAGCAATAGGGTCCTGA...TTGGAGGACGGATGCCCGGGCCGGCAGGCTGGCGTGCCACTGCCCTCTACACAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR CAA 90 bp | GGATTCAGCCCTCTGCATCTGCCTTCCACCCTGGCCTACCTATGCGTATTGGGCACCCGAGGAAGAGGGTaGCCGCCGTCCGCGCCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: GFSPLHLPSTLAYLCVLGTRGRG*PPSAPL Trigger: GAGGGGCGCGGACGGCGGCAACCCTCTTCCTCGGGT...GCCCAATACGCATAGGTAGGCCAGGGTGGAAGGCAGATGCAGAGGGCTGAATCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096365.5 |
||
| 3UTR TCA 72 bp | CAAAGCCTGCGGAACAGAACGCCTCTGTGGCCCGCCTaGTATCCTGCTCCTCCTCCGGCCAGCTGCCCGAGT | + |
|
Preference number: 3 (lower is better) Translates to: QSLRNRTPLWPA*YPAPPPASCPS Trigger: ACTCGGGCAGCTGGCCGGAGGAGGAGCAGGATATCAGGCGGGCCACAGAGGCGTTCTGTTCCGCAGGCTTTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096365.5 |
||
| 3UTR CCA 72 bp | TGGGCGCCTCTGTGTGCGTGTGCATGCGGCACAGGCTaGCAGGCCCAGGCTAGGAACTGTGGGCATTTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: WAPLCACACGTG*QAQARNCGHFA Trigger: GGCAAAATGCCCACAGTTCCTAGCCTGGGCCTGCCAGCCTGTGCCGCATGCACACGCACACAGAGGCGCCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR TCA 72 bp | GAGGATGCGAGGCGTGGGTTGGAGGGAGGCTCGGACTaGGGCCCTAGAAAGAACCCGAGGAAGAGGGTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: EDARRGLEGGSD*GPRKNPRKRVA Trigger: GGCAACCCTCTTCCTCGGGTTCTTTCTAGGGCCTCAGTCCGAGCCTCCCTCCAACCCACGCCTCGCATCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096365.5 |
||
| 3UTR GCA 72 bp | GCCCCGGGAAGGGTTGGGAAGAAGGGTGGGACTGCATaGAGTGATGTCACAAAGGCGGCGGCCAATGGAGCG | + |
|
Preference number: 3 (lower is better) Translates to: APGRVGKKGGTA*SDVTKAAANGA Trigger: CGCTCCATTGGCCGCCGCCTTTGTGACATCACTGCATGCAGTCCCACCCTTCTTCCCAACCCTTCCCGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGATTCAGCCCTCTGCATCTGCCTTCCACCCTGGCCTACCTATGCGTATTGCCCTGGGGGCCCGTATaGCTGAGAGCCGACCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: QGFSPLHLPSTLAYLCVLPWGPV*LRADLA Trigger: AGCCAGGTCGGCTCTCAGCAATACGGGCCCCCAGGG...CAATACGCATAGGTAGGCCAGGGTGGAAGGCAGATGCAGAGGGCTGAATCCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR GCA 72 bp | ATCCCAGCCTCTGGAACCATGACGCCTGCCGGGCTCTaGCCTGGGGTAGGGTATGGGGAAAGAAAGTCTGCG | + |
|
Preference number: 3 (lower is better) Translates to: IPASGTMTPAGL*PGVGYGERKSA Trigger: CGCAGACTTTCTTTCCCCATACCCTACCCCAGGGCAGAGCCCGGCAGGCGTCATGGTTCCAGAGGCTGGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR CCA 72 bp | AGCGGGGCCCTTGGGATAGGGTCACCGCCGAGGCTTTaGCATAGACGGGTGAAAGTTGGCAACCGAGTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SGALGIGSPPRL*HRRVKVGNRVG Trigger: TCCCACTCGGTTGCCAACTTTCACCCGTCTATGCCAAAGCCTCGGCGGTGACCCTATCCCAAGGGCCCCGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR CCA 72 bp | GAGAGGACTTGGGTGATACCATTCCATCCCAGCCTCTaGAACCATGACGCCTGCCGGGCTCTGCCCTGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: ERTWVIPFHPSL*NHDACRALPWG Trigger: ACCCCAGGGCAGAGCCCGGCAGGCGTCATGGTTCCAGAGGCTGGGATGGAATGGTATCACCCAAGTCCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR CAA 90 bp | CGCAAAGCAAATACAGAGGTGTGTAGAGGGCAGTGGCACGCCAGCCTGCCGGCCTCAGGACCCTATTGCTaGAAGGGGCTGGCAAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: RKANTEVCRGQWHASLPASGPYC*KGLARL Trigger: GAGCCTTGCCAGCCCCTTCAAGCAATAGGGTCCTGA...GGCCGGCAGGCTGGCGTGCCACTGCCCTCTACACACCTCTGTATTTGCTTTGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR GCA 72 bp | GAGATGAGGTTCGGTTCTGGGTCTGGTCGACCCTATTaGTGGGAGAAAGCCTGGGGCACCCTGGAGGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: EMRFGSGSGRPY*WEKAWGTLEER Trigger: CCTCTCCTCCAGGGTGCCCCAGGCTTTCTCCCAGCAATAGGGTCGACCAGACCCAGAACCGAACCTCATCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR GCA 72 bp | GAAGCCGGGCTGGAAGAATTAGGATTTGGCAGAGGATaGGAGGCGTGGGTTGGAGGGAGGCTCGGACTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: EAGLEELGFGRG*EAWVGGRLGLR Trigger: CCTCAGTCCGAGCCTCCCTCCAACCCACGCCTCGCATCCTCTGCCAAATCCTAATTCTTCCAGCCCGGCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096365.5 |
||
| 3UTR GCA 72 bp | AGCCCTCTGCATCTGCCTTCCACCCTGGCCTACCTATaGGTATTGGGCCCTGTCACTGATGGGCACCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SPLHLPSTLAYL*VLGPVTDGHLQ Trigger: CTGGAGGTGCCCATCAGTGACAGGGCCCAATACGCATAGGTAGGCCAGGGTGGAAGGCAGATGCAGAGGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR CCA 72 bp | ATGGGTGGCCCTGGTGAAGCTGGGCCCCAGAGACCCTaGGACCTGTCCAATTTGAGCTGGGAACATAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: MGGPGEAGPQRP*DLSNLSWEHKA Trigger: GGCCTTATGTTCCCAGCTCAAATTGGACAGGTCCCAGGGTCTCTGGGGCCCAGCTTCACCAGGGCCACCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR CAA 90 bp | GACACGGCCCGAGTAAAAATCCCGGCCTGTTGCGGGCCAGGAGTATGTACAAGGGTCTGGTCGACCCTATaGCTGGGAGAAAGCCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: DTARVKIPACCGPGVCTRVWSTL*LGESLG Trigger: CCCCAGGCTTTCTCCCAGCAATAGGGTCGACCAGAC...CCTTGTACATACTCCTGGCCCGCAACAGGCCGGGATTTTTACTCGGGCCGTGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR CCA 72 bp | GAGCCTGACTACACCCAGCGTATTCTAGGACTGAGGTaGGTAGGAGAGGCCATAGGGGCCCAGGGATTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: EPDYTQRILGLR*VGEAIGAQGFS Trigger: GCTGAATCCCTGGGCCCCTATGGCCTCTCCTACCCACCTCAGTCCTAGAATACGCTGGGTGTAGTCAGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR CCA 72 bp | GGCCTGCGGGTCCGCACCAGGAGGGTTAGCCAAGCTTaGTGCTGGGTTGAGACTGGCCATATCATATACTCC | + |
|
Preference number: 3 (lower is better) Translates to: GLRVRTRRVSQA*CWVETGHIIYS Trigger: GGAGTATATGATATGGCCAGTCTCAACCCAGCACCAAGCTTGGCTAACCCTCCTGGTGCGGACCCGCAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR TCA 72 bp | CACCCTGGCCTACCTATGCGTATTGGGCCCTGTCACTaGTGGGCACCTCCAGAAGGTTGCCACATCTCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: HPGLPMRIGPCH*WAPPEGCHISD Trigger: GTCAGAGATGTGGCAACCTTCTGGAGGTGCCCATCAGTGACAGGGCCCAATACGCATAGGTAGGCCAGGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR GCA 72 bp | CTGCGGGTCCGCACCAGGAGGGTTAGCCAAGCTTGGTaGTGGGTTGAGACTGGCCATATCATATACTCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LRVRTRRVSQAW*WVETGHIIYSS Trigger: GCTGGAGTATATGATATGGCCAGTCTCAACCCAGCACCAAGCTTGGCTAACCCTCCTGGTGCGGACCCGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR CCA 72 bp | TGCATCTGCCTTCCACCCTGGCCTACCTATGCGTATTaGGCCCTGTCACTGATGGGCACCTCCAGAAGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: CICLPPWPTYAY*ALSLMGTSRRL Trigger: CAACCTTCTGGAGGTGCCCATCAGTGACAGGGCCCAATACGCATAGGTAGGCCAGGGTGGAAGGCAGATGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGTCCGCACCAGGAGGGTTAGCCAAGCTTGGTGCTGGGTTGAGACTGGCCATACTGACAAGAGAGGACTaGGGTGATACCATTCCATCC | + |
|
Preference number: 3 (lower is better) Translates to: GSAPGGLAKLGAGLRLAILTRED*GDTIPS Trigger: GGATGGAATGGTATCACCCAAGTCCTCTCTTGTCAG...TATGGCCAGTCTCAACCCAGCACCAAGCTTGGCTAACCCTCCTGGTGCGGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAGCCCTCTGCATCTGCCTTCCACCCTGGCCTACCTATGCGTATTGGGCCCTGCTGACAAGAGAGGACTaGGGTGATACCATTCCATCC | + |
|
Preference number: 3 (lower is better) Translates to: SALCICLPPWPTYAYWALLTRED*GDTIPS Trigger: GGATGGAATGGTATCACCCAAGTCCTCTCTTGTCAG...CAGGGCCCAATACGCATAGGTAGGCCAGGGTGGAAGGCAGATGCAGAGGGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR TCA 72 bp | GTCGGCGGGAAGGATGAGGGTTCGGCGCCCCCTCCCTaGCCCGAGTGCAATCCGTTCATAAATAAAACGTAT | + |
|
Preference number: 3 (lower is better) Translates to: VGGKDEGSAPPP*PECNPFINKTY Trigger: ATACGTTTTATTTATGAACGGATTGCACTCGGGTCAGGGAGGGGGCGCCGAACCCTCATCCTTCCCGCCGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR TCA 72 bp | CTAGGGGCCTATGGGATGGGTAGGGCAGGGGATACCTaGTTCTCAGTAACTCTAGAGGCTGCGGCAGCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LGAYGMGRAGDT*FSVTLEAAAAS Trigger: TGAAGCTGCCGCAGCCTCTAGAGTTACTGAGAATCAGGTATCCCCTGCCCTACCCATCCCATAGGCCCCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR TCA 72 bp | AAGCTGGGCCCCAGAGACCCTGGGACCTGTCCAATTTaGGCTGGGAACATAAGGCCCAAGTCAAAGGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: KLGPRDPGTCPI*AGNIRPKSKAE Trigger: CTCTGCCTTTGACTTGGGCCTTATGTTCCCAGCTCAAATTGGACAGGTCCCAGGGTCTCTGGGGCCCAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR CCA 72 bp | GAGACCCAACTAAGAGATGAGGTTCGGTTCTGGGTCTaGTCGACCCTATTGCTGGGAGAAAGCCTGGGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: ETQLRDEVRFWV*STLLLGESLGH Trigger: GTGCCCCAGGCTTTCTCCCAGCAATAGGGTCGACCAGACCCAGAACCGAACCTCATCTCTTAGTTGGGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR CCA 72 bp | AGAATTAGGATTTGGCAGAGGATGCGAGGCGTGGGTTaGAGGGAGGCTCGGACTGAGGCCCTAGAAAGAACC | + |
|
Preference number: 3 (lower is better) Translates to: RIRIWQRMRGVG*REARTEALERT Trigger: GGTTCTTTCTAGGGCCTCAGTCCGAGCCTCCCTCCAACCCACGCCTCGCATCCTCTGCCAAATCCTAATTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096365.5 |
||
| 3UTR CCA 72 bp | CTCGTATCTCAGGGAATCAGAAAATGGGTACCTGTATaGGTGGCCCTGGTGAAGCTGGGCCCCAGAGACCCT | + |
|
Preference number: 3 (lower is better) Translates to: LVSQGIRKWVPV*VALVKLGPRDP Trigger: AGGGTCTCTGGGGCCCAGCTTCACCAGGGCCACCCATACAGGTACCCATTTTCTGATTCCCTGAGATACGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGAGGGTTAGCCAAGCTTGGTGCTGGGTTGAGACTGGCCATATCATATACTGTCTGGTCGACCCTATaGCTGGGAGAAAGCCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: PGGLAKLGAGLRLAISYTVWSTL*LGESLG Trigger: CCCCAGGCTTTCTCCCAGCAATAGGGTCGACCAGAC...AGTATATGATATGGCCAGTCTCAACCCAGCACCAAGCTTGGCTAACCCTCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCGGCAGCTTCACATGCAGTGCGCATTATTGCTCTATAGTCTGCATCGGACTACGCCGGACTGAAGGCTaGGCCTGGAAGGCTTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: CGSFTCSAHYCSIVCIGLRRTEG*AWKAWE Trigger: TTCCCAAGCCTTCCAGGCCAAGCCTTCAGTCCGGCG...TAGTCCGATGCAGACTATAGAGCAATAATGCGCACTGCATGTGAAGCTGCCGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096365.5 |
||
| 3UTR GCA 72 bp | CGTTCCTTCTACCTGAATTCGCTAAGTCGGTTATTGTaGTGCTTAGTTATGGGGGCGGGAGGGGGCCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: RSFYLNSLSRLL*CLVMGAGGGPW Trigger: CCATGGGCCCCCTCCCGCCCCCATAACTAAGCAGCACAATAACCGACTTAGCGAATTCAGGTAGAAGGAACG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCTGGTGCTATTGTGCTTAGGAAGGAGGTCTGTCCGTCCGTCCGTCTGTCCAAGCTTGGTGCTGGGTaGAGACTGGCCATATCATAT | + |
|
Preference number: 3 (lower is better) Translates to: GAGAIVLRKEVCPSVRLSKLGAG*RLAISY Trigger: ATATGATATGGCCAGTCTCAACCCAGCACCAAGCTT...GGACAGACGGACGGACGGACAGACCTCCTTCCTAAGCACAATAGCACCAGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR TCA 72 bp | ACCTCACCCCCTGTCTTCAGAGACCCAACTAAGAGATaGGGTTCGGTTCTGGGTCTGGTCGACCCTATTGCT | + |
|
Preference number: 3 (lower is better) Translates to: TSPPVFRDPTKR*GSVLGLVDPIA Trigger: AGCAATAGGGTCGACCAGACCCAGAACCGAACCTCATCTCTTAGTTGGGTCTCTGAAGACAGGGGGTGAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR TCA 72 bp | AGCTGGGAACATAAGGCCCAAGTCAAAGGCAGAGCCTaGCTACACCCAGCGTATTCTAGGACTGAGGTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SWEHKAQVKGRA*LHPAYSRTEVG Trigger: ACCCACCTCAGTCCTAGAATACGCTGGGTGTAGTCAGGCTCTGCCTTTGACTTGGGCCTTATGTTCCCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR GCA 72 bp | TCCTTCTACCTGAATTCGCTAAGTCGGTTATTGTGCTaGTTAGTTATGGGGGCGGGAGGGGGCCCATGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SFYLNSLSRLLC*LVMGAGGGPWL Trigger: AAGCCATGGGCCCCCTCCCGCCCCCATAACTAAGCAGCACAATAACCGACTTAGCGAATTCAGGTAGAAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR GCA 72 bp | GGCAGGGGATACCTGATTCTCAGTAACTCTAGAGGCTaGGGCAGCTTCACATGCAGTGCGCATTATTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: GRGYLILSNSRG*GSFTCSAHYCS Trigger: AGAGCAATAATGCGCACTGCATGTGAAGCTGCCGCAGCCTCTAGAGTTACTGAGAATCAGGTATCCCCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR CCA 72 bp | TCTTCAGAGACCCAACTAAGAGATGAGGTTCGGTTCTaGGTCTGGTCGACCCTATTGCTGGGAGAAAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SSETQLRDEVRF*VWSTLLLGESL Trigger: CAGGCTTTCTCCCAGCAATAGGGTCGACCAGACCCAGAACCGAACCTCATCTCTTAGTTGGGTCTCTGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTAGGTCGGATAAGTTCATGCGATTCCGATATGCGTCATTATTATTCGTTATGCCCTGGGGGCCCGTATaGCTGAGAGCCGACCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SRSDKFMRFRYASLLFVMPWGPV*LRADLA Trigger: AGCCAGGTCGGCTCTCAGCAATACGGGCCCCCAGGG...CATAACGAATAATAATGACGCATATCGGAATCGCATGAACTTATCCGACCTACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR GCA 72 bp | AGCTTCACATGCAGTGCGCATTATTGCTCTATAGTCTaGATCGGACTAACTAAGAGGAAGGGGAGCGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SFTCSAHYCSIV*IGLTKRKGSGQ Trigger: CTGCCCGCTCCCCTTCCTCTTAGTTAGTCCGATGCAGACTATAGAGCAATAATGCGCACTGCATGTGAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGTTCATGCGATTCCGATATGCGTCATTATTATTCGTTATGGAGGACAGAGCCCCCCTCAGGACCCTATaGCTTGAAGGGGCTGGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: KFMRFRYASLLFVMEDRAPLRTL*LEGAGK Trigger: CTTGCCAGCCCCTTCAAGCAATAGGGTCCTGAGGGG...GGCTCTGTCCTCCATAACGAATAATAATGACGCATATCGGAATCGCATGAACTT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR CCA 72 bp | TCATGCGATTCCGATATGCGTCATTATTATTCGTTATaGAGGACAGAGCCCCGGAAGCCGGGCTGGAAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: SCDSDMRHYYSL*RTEPRKPGWKN Trigger: ATTCTTCCAGCCCGGCTTCCGGGGCTCTGTCCTCCATAACGAATAATAATGACGCATATCGGAATCGCATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR GCA 72 bp | ATTCTCAGTAACTCTAGAGGCTGCGGCAGCTTCACATaGAGTGCGCATTATTGCTCTATAGTCTGCATCGGA | + |
|
Preference number: 3 (lower is better) Translates to: ILSNSRGCGSFT*SAHYCSIVCIG Trigger: TCCGATGCAGACTATAGAGCAATAATGCGCACTGCATGTGAAGCTGCCGCAGCCTCTAGAGTTACTGAGAAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR TCA 90 bp | TGCCGGCCCGGGCATCCGTCCTCCAACACCCGAAGCCTGGGGAGCGAGGGAGGGAGGCTTGAACCGGGCTaGGCTGCGGCGGCGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CRPGHPSSNTRSLGSEGGRLEPG*AAAAQG Trigger: CCCCTGCGCCGCCGCAGCTCAGCCCGGTTCAAGCCT...CCCTCCCTCGCTCCCCAGGCTTCGGGTGTTGGAGGACGGATGCCCGGGCCGGCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR GCA 90 bp | GCCTGGGCCTCCAGGAAAGGGCCGGCCTCGGGGGCAGAGGAAGTGGTCCTGGACATCCAGAGCCTCGCGTaGCCGGCCCGCCCCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: AWASRKGPASGAEEVVLDIQSLA*PARPHL Trigger: GAGGTGGGGGCGGGCCGGGCACGCGAGGCTCTGGAT...GTCCAGGACCACTTCCTCTGCCCCCGAGGCCGGCCCTTTCCTGGAGGCCCAGGC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR CAA 72 bp | CCCGGACGCCAGCGGAGATTTCCCTGGGGGCCCGTATaGCTGAGAGCCGACCTGGCTGGCGGAGGCCCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGRQRRFPWGPV*LRADLAGGGPA Trigger: AGCGGGGCCTCCGCCAGCCAGGTCGGCTCTCAGCAATACGGGCCCCCAGGGAAATCTCCGCTGGCGTCCGGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR GCA 90 bp | TGCTGCTTAGTTATGGGGGCGGGAGGGGGCCCATGGCTTTCCACGGCGGCAGGGGTCGCTGTCGGGGGCTaGCACCGAGGCTGTCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CCLVMGAGGGPWLSTAAGVAVGG*HRGCRG Trigger: CCCTCGACAGCCTCGGTGGCAGCCCCCGACAGCGAC...CCCTGCCGCCGTGGAAAGCCATGGGCCCCCTCCCGCCCCCATAACTAAGCAGCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR GCA 90 bp | CCCGGGCATCCGTCCTCCAACACCCGAAGCCTGGGGAGCGAGGGAGGGGGCCCGTGGACACGTACACCTTaGCACACGTTGGGCAACGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGHPSSNTRSLGSEGGGPWTRTP*HTLGNA Trigger: GGCGTTGCCCAACGTGTGGCAAGGTGTACGTGTCCA...CGGGCCCCCTCCCTCGCTCCCCAGGCTTCGGGTGTTGGAGGACGGATGCCCGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR TCA 90 bp | GCCTGCGGGTCCGCACCAGGAGGGTTAGCCAAGCTTGGTGCTGGGTTGAGACTGCCGCCGCGTCGCCGTTaGTGTAGCCGCCAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ACGSAPGGLAKLGAGLRLPPRRR*CSRQQQ Trigger: CTGCTGCTGGCGGCTACATCAACGGCGACGCGGCGG...CAGTCTCAACCCAGCACCAAGCTTGGCTAACCCTCCTGGTGCGGACCCGCAGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCGCCTCTGTGTGCGTGTGCATGCGGCACAGGCTGGCAGGCCCAGGCTAGGCATAGGCTCCGGGGATaGCCCTTTGAGCAACGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: WAPLCACACGTGWQAQARHRLRG*PFEQRR Trigger: GCGGCGTTGCTCAAAGGGCCATCCCCGGAGCCTATG...CCTAGCCTGGGCCTGCCAGCCTGTGCCGCATGCACACGCACACAGAGGCGCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGGCAGTGGCACGCCAGCCTGCCGGCCCGGGCATCCGTCCTCCAACACCCGGCCCTTGAAGCAGGCTaGCTCGTAGTGCTTGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RGQWHASLPARASVLQHPALEAG*LVVLVE Trigger: CTCAACAAGCACTACGAGTCAGCCTGCTTCAAGGGC...CGGGTGTTGGAGGACGGATGCCCGGGCCGGCAGGCTGGCGTGCCACTGCCCTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR GCA 90 bp | GGGGCGGAAGAGGGACACGGCCCGAGTAAAAATCCCGGCCTGTTGCGGGCCAGGGGTTTCTCGCCCGTGTaGGAGCGCATATGGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GAEEGHGPSKNPGLLRARGFSPV*ERIWPC Trigger: GCAGGGCCATATGCGCTCGCACACGGGCGAGAAACC...CCTGGCCCGCAACAGGCCGGGATTTTTACTCGGGCCGTGTCCCTCTTCCGCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR GCA 90 bp | GGCAGTGGCACGCCAGCCTGCCGGCCCGGGCATCCGTCCTCCAACACCCGAAGCGCGCGAAGCTCTTCTTaGAGCGCTTGCACTGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GSGTPACRPGHPSSNTRSARSSS*SACTGS Trigger: ACTTCCAGTGCAAGCGCTGCAAGAAGAGCTTCGCGC...GCTTCGGGTGTTGGAGGACGGATGCCCGGGCCGGCAGGCTGGCGTGCCACTGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR GCA 90 bp | TGGGCGCCTCTGTGTGCGTGTGCATGCGGCACAGGCTGGCAGGCCCAGGCTAGGTGGACACGTACACCTTaGCACACGTTGGGCAACGCC | + |
|
Preference number: 4 (lower is better) Translates to: WAPLCACACGTGWQAQARWTRTP*HTLGNA Trigger: GGCGTTGCCCAACGTGTGGCAAGGTGTACGTGTCCA...CCTAGCCTGGGCCTGCCAGCCTGTGCCGCATGCACACGCACACAGAGGCGCCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR TCA 90 bp | CTCTGCATCTGCCTTCCACCCTGGCCTACCTATGCGTATTGGGCCCTGTCACTGCCGCCGCGTCGCCGTTaGTGTAGCCGCCAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LCICLPPWPTYAYWALSLPPRRR*CSRQQQ Trigger: CTGCTGCTGGCGGCTACATCAACGGCGACGCGGCGG...CAGTGACAGGGCCCAATACGCATAGGTAGGCCAGGGTGGAAGGCAGATGCAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGATTCAGCCCTCTGCATCTGCCTTCCACCCTGGCCTACCTATGCGTATTGATCCAGAGCCTCGCGTaGCCGGCCCGCCCCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: QGFSPLHLPSTLAYLCVLIQSLA*PARPHL Trigger: GAGGTGGGGGCGGGCCGGGCACGCGAGGCTCTGGAT...CAATACGCATAGGTAGGCCAGGGTGGAAGGCAGATGCAGAGGGCTGAATCCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR CAA 72 bp | GAAGAGGGACACGGCCCGAGTAAAAATCCCGGCCTGTaGCGGGCCAGGAGTATGTACAAGGTGGCGGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: EEGHGPSKNPGL*RARSMYKVAGR Trigger: GCGCCCCGCCACCTTGTACATACTCCTGGCCCGCAACAGGCCGGGATTTTTACTCGGGCCGTGTCCCTCTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR CCA 90 bp | GGGGCGGAAGAGGGACACGGCCCGAGTAAAAATCCCGGCCTGTTGCGGGCCAGGTTGCAGCGCTTGCACTaGAAGTGCTTGAAGGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GAEEGHGPSKNPGLLRARLQRLH*KCLKAE Trigger: CTCCGCCTTCAAGCACTTCCAGTGCAAGCGCTGCAA...CCTGGCCCGCAACAGGCCGGGATTTTTACTCGGGCCGTGTCCCTCTTCCGCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR CCA 90 bp | GGGTCCGCACCAGGAGGGTTAGCCAAGCTTGGTGCTGGGTTGAGACTGGCCATACATAGGCTCCGGGGATaGCCCTTTGAGCAACGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GSAPGGLAKLGAGLRLAIHRLRG*PFEQRR Trigger: GCGGCGTTGCTCAAAGGGCCATCCCCGGAGCCTATG...TATGGCCAGTCTCAACCCAGCACCAAGCTTGGCTAACCCTCCTGGTGCGGACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR CCA 90 bp | AAGGCAGAGCCTGACTACACCCAGCGTATTCTAGGACTGAGGTGGGTAGGAGAGAGCAGTAGCCAGCTCTaGGCGAGGGGTGGGCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KAEPDYTQRILGLRWVGESSSQL*ARGGRR Trigger: CCGCCGCCCACCCCTCGCCCAGAGCTGGCTACTGCT...CTCTCCTACCCACCTCAGTCCTAGAATACGCTGGGTGTAGTCAGGCTCTGCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR GCA 90 bp | TCCGAGGAGCTGGTGCTATTGTGCTTAGGAAGGAGGTCTGTCCGTCCGTCCGTCGGTCTGCAAAGGCCTTaGCGCAGTGCGCACAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SEELVLLCLGRRSVRPSVGLQRP*RSAHSR Trigger: TCGGCTGTGCGCACTGCGGCAAGGCCTTTGCAGACC...GACGGACGGACGGACAGACCTCCTTCCTAAGCACAATAGCACCAGCTCCTCGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR CCA 90 bp | AGGAGGGTTAGCCAAGCTTGGTGCTGGGTTGAGACTGGCCATATCATATACTCCGCTCTGGGCGAGGGGTaGGCGGCGGTGCTGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RRVSQAWCWVETGHIIYSALGEG*AAVLSQ Trigger: CTGGCTCAGCACCGCCGCCCACCCCTCGCCCAGAGC...GGAGTATATGATATGGCCAGTCTCAACCCAGCACCAAGCTTGGCTAACCCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGAGGGTTAGCCAAGCTTGGTGCTGGGTTGAGACTGGCCATATCATATACTGCTCTGGGCGAGGGGTaGGCGGCGGTGCTGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGGLAKLGAGLRLAISYTALGEG*AAVLSQ Trigger: CTGGCTCAGCACCGCCGCCCACCCCTCGCCCAGAGC...AGTATATGATATGGCCAGTCTCAACCCAGCACCAAGCTTGGCTAACCCTCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGAGGGTTAGCCAAGCTTGGTGCTGGGTTGAGACTGGCCATATCATATACTGTCGCTGTCGGGGGCTaGCACCGAGGCTGTCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGGLAKLGAGLRLAISYTVAVGG*HRGCRG Trigger: CCCTCGACAGCCTCGGTGGCAGCCCCCGACAGCGAC...AGTATATGATATGGCCAGTCTCAACCCAGCACCAAGCTTGGCTAACCCTCCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR GCA 90 bp | CCAGCGTATTCTAGGACTGAGGTGGGTAGGAGAGGCCATAGGGGCCCAGGGATTCGTTGGGCAACGCCTTaGCAGCTGGCTGTCCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PAYSRTEVGRRGHRGPGIRWATP*QLAVQA Trigger: AGCTTGGACAGCCAGCTGGCAAGGCGTTGCCCAACG...AATCCCTGGGCCCCTATGGCCTCTCCTACCCACCTCAGTCCTAGAATACGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGCATCTGCCTTCCACCCTGGCCTACCTATGCGTATTGGGCCCTGTCACTGTCGTGCGTGAGCAGGTaGATAGCCATGGCCGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LCICLPPWPTYAYWALSLSCVSR*IAMAGM Trigger: CATGCCGGCCATGGCTATGCACCTGCTCACGCACGA...CAGTGACAGGGCCCAATACGCATAGGTAGGCCAGGGTGGAAGGCAGATGCAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR GCA 90 bp | CGGCGCTCCGAGGAGCTGGTGCTATTGTGCTTAGGAAGGAGGTCTGTCCGTCCGGCGCGAAGCTCTTCTTaGAGCGCTTGCACTGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RRSEELVLLCLGRRSVRPARSSS*SACTGS Trigger: ACTTCCAGTGCAAGCGCTGCAAGAAGAGCTTCGCGC...CGGACGGACAGACCTCCTTCCTAAGCACAATAGCACCAGCTCCTCGGAGCGCCG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR CAA 72 bp | AGAGATGAGGTTCGGTTCTGGGTCTGGTCGACCCTATaGCTGGGAGAAAGCCTGGGGCACCCTGGAGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RDEVRFWVWSTL*LGESLGHPGGE Trigger: CTCTCCTCCAGGGTGCCCCAGGCTTTCTCCCAGCAATAGGGTCGACCAGACCCAGAACCGAACCTCATCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR GCA 90 bp | CGAGGAGCTGGTGCTATTGTGCTTAGGAAGGAGGTCTGTCCGTCCGTCCGTCTGCGCTTGCACTGGAAGTaGTTGAAGGCGGAGTGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: RGAGAIVLRKEVCPSVRLRLHWK*LKAECV Trigger: GACGCACTCCGCCTTCAAGCACTTCCAGTGCAAGCG...CAGACGGACGGACGGACAGACCTCCTTCCTAAGCACAATAGCACCAGCTCCTCG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR TCA 90 bp | GACACGGCCCGAGTAAAAATCCCGGCCTGTTGCGGGCCAGGAGTATGTACAAGGGCCCTTGAAGCAGGCTaGCTCGTAGTGCTTGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DTARVKIPACCGPGVCTRALEAG*LVVLVE Trigger: CTCAACAAGCACTACGAGTCAGCCTGCTTCAAGGGC...CCTTGTACATACTCCTGGCCCGCAACAGGCCGGGATTTTTACTCGGGCCGTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGATTCAGCCCTCTGCATCTGCCTTCCACCCTGGCCTACCTATGCGTATTGCGCTTGCACTGGAAGTaGTTGAAGGCGGAGTGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QGFSPLHLPSTLAYLCVLRLHWK*LKAECV Trigger: GACGCACTCCGCCTTCAAGCACTTCCAGTGCAAGCG...CAATACGCATAGGTAGGCCAGGGTGGAAGGCAGATGCAGAGGGCTGAATCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGCATCTGCCTTCCACCCTGGCCTACCTATGCGTATTGGGCCCTGTCACTGTTGCAGCGCTTGCACTaGAAGTGCTTGAAGGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LCICLPPWPTYAYWALSLLQRLH*KCLKAE Trigger: CTCCGCCTTCAAGCACTTCCAGTGCAAGCGCTGCAA...CAGTGACAGGGCCCAATACGCATAGGTAGGCCAGGGTGGAAGGCAGATGCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR CAA 72 bp | CTGCATCTGCCTTCCACCCTGGCCTACCTATGCGTATaGGGCCCTGTCACTGATGGGCACCTCCAGAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LHLPSTLAYLCV*GPVTDGHLQKV Trigger: AACCTTCTGGAGGTGCCCATCAGTGACAGGGCCCAATACGCATAGGTAGGCCAGGGTGGAAGGCAGATGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR CAA 72 bp | CAGGCTGGCAGGCCCAGGCTAGGAACTGTGGGCATTTaGCCAGGTGGAGTAAGGGGGTTAGATATGGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: QAGRPRLGTVGI*PGGVRGLDMGT Trigger: AGTGCCCATATCTAACCCCCTTACTCCACCTGGCAAAATGCCCACAGTTCCTAGCCTGGGCCTGCCAGCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR GCA 90 bp | ACCCAACTAAGAGATGAGGTTCGGTTCTGGGTCTGGTCGACCCTATTGCTGGGATCGTGCGTGAGCAGGTaGATAGCCATGGCCGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: TQLRDEVRFWVWSTLLLGSCVSR*IAMAGM Trigger: CATGCCGGCCATGGCTATGCACCTGCTCACGCACGA...TCCCAGCAATAGGGTCGACCAGACCCAGAACCGAACCTCATCTCTTAGTTGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR GCA 90 bp | AGGAGGGTTAGCCAAGCTTGGTGCTGGGTTGAGACTGGCCATATCATATACTCCGGTTTCTCGCCCGTGTaGGAGCGCATATGGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RRVSQAWCWVETGHIIYSGFSPV*ERIWPC Trigger: GCAGGGCCATATGCGCTCGCACACGGGCGAGAAACC...GGAGTATATGATATGGCCAGTCTCAACCCAGCACCAAGCTTGGCTAACCCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR CAA 72 bp | GGGTCGGTGAGTGATGAAGGACTGACAAGAGAGGACTaGGGTGATACCATTCCATCCCAGCCTCTGGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: GSVSDEGLTRED*GDTIPSQPLEP Trigger: TGGTTCCAGAGGCTGGGATGGAATGGTATCACCCAAGTCCTCTCTTGTCAGTCCTTCATCACTCACCGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| 3UTR CAA 72 bp | AAACGTTCCTTCTACCTGAATTCGCTAAGTCGGTTATaGTGCTGCTTAGTTATGGGGGCGGGAGGGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KRSFYLNSLSRL*CCLVMGAGGGP Trigger: TGGGCCCCCTCCCGCCCCCATAACTAAGCAGCACAATAACCGACTTAGCGAATTCAGGTAGAAGGAACGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR GCA 90 bp | GGTCTGAGTAGGTCGGATAAGTTCATGCGATTCCGATATGCGTCATTATTATTCGGTCTGCAAAGGCCTTaGCGCAGTGCGCACAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GLSRSDKFMRFRYASLLFGLQRP*RSAHSR Trigger: TCGGCTGTGCGCACTGCGGCAAGGCCTTTGCAGACC...GAATAATAATGACGCATATCGGAATCGCATGAACTTATCCGACCTACTCAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR CAA 90 bp | GGCAGTGGCACGCCAGCCTGCCGGCCCGGGCATCCGTCCTCCAACACCCGAAGCACGTTGGGCAACGCCTaGCCAGCTGGCTGTCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GSGTPACRPGHPSSNTRSTLGNA*PAGCPS Trigger: GCTTGGACAGCCAGCTGGCAAGGCGTTGCCCAACGT...GCTTCGGGTGTTGGAGGACGGATGCCCGGGCCGGCAGGCTGGCGTGCCACTGCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR CAA 90 bp | TGGGCGCCTCTGTGTGCGTGTGCATGCGGCACAGGCTGGCAGGCCCAGGCTAGGCCGCACACGCCGCACTaGTGGCGCAGATCGTGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: WAPLCACACGTGWQAQARPHTPH*WRRSCV Trigger: CACGCACGATCTGCGCCACAAGTGCGGCGTGTGCGG...CCTAGCCTGGGCCTGCCAGCCTGTGCCGCATGCACACGCACACAGAGGCGCCCA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR CAA 90 bp | CCCGGGCATCCGTCCTCCAACACCCGAAGCCTGGGGAGCGAGGGAGGGGGCCCGCTCTTCTTGCAGCGCTaGCACTGGAAGTGCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PGHPSSNTRSLGSEGGGPLFLQR*HWKCLK Trigger: CTTCAAGCACTTCCAGTGCAAGCGCTGCAAGAAGAG...CGGGCCCCCTCCCTCGCTCCCCAGGCTTCGGGTGTTGGAGGACGGATGCCCGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS CCA 90 bp | ACCCAGCTCTCCCCGCACAGCCGCAGCATACATAGGCTCCGGGGATaGCCCTTTGAGCAACGCCGCCTCAGCGTCGCCATCGTAGACCGA | + |
|
Preference number: 5 (lower is better) Translates to: TQLSPHSRSIHRLRG*PFEQRRLSVAIVDR Trigger: TCGGTCTACGATGGCGACGCTGAGGCGGCGTTGCTCAAAGGGCCATCCCCGGAGCCTATGTATGCTGCGGCTGTGCGGGGAGAGCTGGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR CAA 90 bp | CGCAAAGCAAATACAGAGGTGTGTAGAGGGCAGTGGCACGCCAGCCTGCCGGCCCCGCACACGCCGCACTaGTGGCGCAGATCGTGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: RKANTEVCRGQWHASLPAPHTPH*WRRSCV Trigger: CACGCACGATCTGCGCCACAAGTGCGGCGTGTGCGG...GGCCGGCAGGCTGGCGTGCCACTGCCCTCTACACACCTCTGTATTTGCTTTGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS TCA 90 bp | CCTCAGCGTCGCCATCGTAGACCGACGCAGGCCCCACGTAGTCACTaGGGTATCCTTTATCTTGCAGTCGCACTCCGAGATCGCTGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: PQRRHRRPTQAPRSH*GILYLAVALRDRCG Trigger: CCCGCAGCGATCTCGGAGTGCGACTGCAAGATAAAGGATACCTCAGTGACTACGTGGGGCCTGCGTCGGTCTACGATGGCGACGCTGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR CAA 90 bp | CTCTGCATCTGCCTTCCACCCTGGCCTACCTATGCGTATTGGGCCCTGTCACTGACGTTGGGCAACGCCTaGCCAGCTGGCTGTCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LCICLPPWPTYAYWALSLTLGNA*PAGCPS Trigger: GCTTGGACAGCCAGCTGGCAAGGCGTTGCCCAACGT...CAGTGACAGGGCCCAATACGCATAGGTAGGCCAGGGTGGAAGGCAGATGCAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR CAA 90 bp | GACACGGCCCGAGTAAAAATCCCGGCCTGTTGCGGGCCAGGAGTATGTACAAGGAGCGCGAAGCTCTTCTaGCAGCGCTTGCACTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: DTARVKIPACCGPGVCTRSAKLF*QRLHWK Trigger: CTTCCAGTGCAAGCGCTGCAAGAAGAGCTTCGCGCT...CCTTGTACATACTCCTGGCCCGCAACAGGCCGGGATTTTTACTCGGGCCGTGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS GCA 90 bp | CACTCCGAGATCGCTGCGGGCGCGCCCGTAGGAGCTGTCGAGGTCTaGCGAAGAGAATGTGTCAAGTTTGACCTTCTTAACCAGGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: HSEIAAGAPVGAVEV*RRECVKFDLLNQEG Trigger: TCCTTCCTGGTTAAGAAGGTCAAACTTGACACATTCTCTTCGGCAGACCTCGACAGCTCCTACGGGCGCGCCCGCAGCGATCTCGGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS-3UTR CAA 90 bp | GGTCTGAGTAGGTCGGATAAGTTCATGCGATTCCGATATGCGTCATTATTATTCAGCGCGAAGCTCTTCTaGCAGCGCTTGCACTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GLSRSDKFMRFRYASLLFSAKLF*QRLHWK Trigger: CTTCCAGTGCAAGCGCTGCAAGAAGAGCTTCGCGCT...GAATAATAATGACGCATATCGGAATCGCATGAACTTATCCGACCTACTCAGACC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS CAA 72 bp | GCTGCCACCGAGGCTGTCGAGGGGGCCGCGGCAGCGTaGGCATTAGCAGCCTTACGGCGTGAGCGCCCGTCA | + |
|
Preference number: 6 (lower is better) Translates to: AATEAVEGAAAA*ALAALRRERPS Trigger: TGACGGGCGCTCACGCCGTAAGGCTGCTAATGCCAACGCTGCCGCGGCCCCCTCGACAGCCTCGGTGGCAGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS CAA 90 bp | CTGTCGGGGGCTGCCACCGAGGCTGTCGAGGGGGCCGCGGCAGCGTaGGCATTAGCAGCCTTACGGCGTGAGCGCCCGTCAGTGATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LSGAATEAVEGAAAA*ALAALRRERPSVMK Trigger: CTTCATCACTGACGGGCGCTCACGCCGTAAGGCTGCTAATGCCAACGCTGCCGCGGCCCCCTCGACAGCCTCGGTGGCAGCCCCCGACAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS CCA 72 bp | TCCCCGCACAGCCGCAGCATACATAGGCTCCGGGGATaGCCCTTTGAGCAACGCCGCCTCAGCGTCGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: SPHSRSIHRLRG*PFEQRRLSVAI Trigger: GATGGCGACGCTGAGGCGGCGTTGCTCAAAGGGCCATCCCCGGAGCCTATGTATGCTGCGGCTGTGCGGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS TCA 72 bp | CGCCATCGTAGACCGACGCAGGCCCCACGTAGTCACTaGGGTATCCTTTATCTTGCAGTCGCACTCCGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: RHRRPTQAPRSH*GILYLAVALRD Trigger: ATCTCGGAGTGCGACTGCAAGATAAAGGATACCTCAGTGACTACGTGGGGCCTGCGTCGGTCTACGATGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||
| CDS GCA 72 bp | ATCGCTGCGGGCGCGCCCGTAGGAGCTGTCGAGGTCTaGCGAAGAGAATGTGTCAAGTTTGACCTTCTTAAC | + |
|
Preference number: 6 (lower is better) Translates to: IAAGAPVGAVEV*RRECVKFDLLN Trigger: GTTAAGAAGGTCAAACTTGACACATTCTCTTCGGCAGACCTCGACAGCTCCTACGGGCGCGCCCGCAGCGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096365.5 ENSMUST00000164703.2 |
||