Pregenerated sensors for SCRN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019124Ensembl transcript IDs: ENSMUST00000019268.11, ENSMUST00000129744.2, ENSMUST00000203800.2, ENSMUST00000205108.2
Found 188 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCGGCTGCGGGAGGCATGGGAGAGCCAGGATGCTCGAGCAATGCCTaGCACACCTCTCCCACCATGGTGTGCTTTCTCCCAAGGCTGAAC | + |
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Preference number: 1 (lower is better) Translates to: AAAGGMGEPGCSSNA*HTSPTMVCFLPRLN Trigger: GTTCAGCCTTGGGAGAAAGCACACCATGGTGGGAGAGGTGTGGCAGGCATTGCTCGAGCATCCTGGCTCTCCCATGCCTCCCGCAGCCGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR TCA 90 bp | GACACACACCACAGGACAGGAGTTGGGGCTCAGCGCCATGTAGAATaGAATGCCGCGGCTGCGGGAGGCATGGGAGAGCCAGGATGCTCG | + |
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Preference number: 1 (lower is better) Translates to: DTHHRTGVGAQRHVE*NAAAAGGMGEPGCS Trigger: CGAGCATCCTGGCTCTCCCATGCCTCCCGCAGCCGCGGCATTTCATTCTACATGGCGCTGAGCCCCAACTCCTGTCCTGTGGTGTGTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR CCA 90 bp | AGAGAGGGACCAGGCCCTTCACAGCTCTTGTCTTTCCCACCAGCGTaGCCCTGCAGCCCTGTCCAAGGCGGAGGGAACTCAAGTTCCTCA | + |
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Preference number: 1 (lower is better) Translates to: REGPGPSQLLSFPPA*PCSPVQGGGNSSSS Trigger: TGAGGAACTTGAGTTCCCTCCGCCTTGGACAGGGCTGCAGGGCCACGCTGGTGGGAAAGACAAGAGCTGTGAAGGGCCTGGTCCCTCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR CCA 90 bp | CACAGGGCCAGGTCCTCAGGTGGGAGCACTGTGGATGAGGAACTGTaGCTAACATGGATGCCCAGCTCTCCTCCAGGCGGAAGCAGGTCT | + |
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Preference number: 1 (lower is better) Translates to: HRARSSGGSTVDEEL*LTWMPSSPPGGSRS Trigger: AGACCTGCTTCCGCCTGGAGGAGAGCTGGGCATCCATGTTAGCCACAGTTCCTCATCCACAGTGCTCCCACCTGAGGACCTGGCCCTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR CCA 90 bp | AGGTCCTCAGGTGGGAGCACTGTGGATGAGGAACTGTGGCTAACATaGATGCCCAGCTCTCCTCCAGGCGGAAGCAGGTCTGCTCCACTG | + |
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Preference number: 1 (lower is better) Translates to: RSSGGSTVDEELWLT*MPSSPPGGSRSAPL Trigger: CAGTGGAGCAGACCTGCTTCCGCCTGGAGGAGAGCTGGGCATCCATGTTAGCCACAGTTCCTCATCCACAGTGCTCCCACCTGAGGACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR TCA 90 bp | TCAATTTCCACACAGGGCCAGGTCCTCAGGTGGGAGCACTGTGGATaGGGAACTGTGGCTAACATGGATGCCCAGCTCTCCTCCAGGCGG | + |
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Preference number: 1 (lower is better) Translates to: SISTQGQVLRWEHCG*GTVANMDAQLSSRR Trigger: CCGCCTGGAGGAGAGCTGGGCATCCATGTTAGCCACAGTTCCTCATCCACAGTGCTCCCACCTGAGGACCTGGCCCTGTGTGGAAATTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR CCA 90 bp | TGGGTTGTCTCAGGCAGGTCAGATCTGATGAGCTGGCCTCAGAGGTaGAGGGCAGACCACACAGGGAAAGCACAGCACGGCTTTCTGCAC | + |
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Preference number: 1 (lower is better) Translates to: WVVSGRSDLMSWPQR*RADHTGKAQHGFLH Trigger: GTGCAGAAAGCCGTGCTGTGCTTTCCCTGTGTGGTCTGCCCTCCACCTCTGAGGCCAGCTCATCAGATCTGACCTGCCTGAGACAACCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR CCA 90 bp | GATCTAGTTAACGAGGCAGTGGGTGGGACGAGGGAGACTGTTCTGTaGATAAATGTCTCACTGCCTTCTGCCCTCAGCCCGCCCTGTCTT | + |
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Preference number: 1 (lower is better) Translates to: DLVNEAVGGTRETVL*INVSLPSALSPPCL Trigger: AAGACAGGGCGGGCTGAGGGCAGAAGGCAGTGAGACATTTATCCACAGAACAGTCTCCCTCGTCCCACCCACTGCCTCGTTAACTAGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR GCA 90 bp | TCCATCCCAGTAAGCAAAGCTTTCATAGCTGGGCTCCTTATCCATTaGCGGAGGAGAAAACCCTTAGAGGGCTGCTGTGCCCTCTGGTGG | + |
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Preference number: 1 (lower is better) Translates to: SIPVSKAFIAGLLIH*RRRKPLEGCCALWW Trigger: CCACCAGAGGGCACAGCAGCCCTCTAAGGGTTTTCTCCTCCGGCAATGGATAAGGAGCCCAGCTATGAAAGCTTTGCTTACTGGGATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR CCA 90 bp | CTGCCTTCTGCCCTCAGCCCGCCCTGTCTTCCTCACACACTCCTGTaGCGTCAAATCCTTTGTGCAAACACACGGATGCTGGAAACAAAT | + |
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Preference number: 1 (lower is better) Translates to: LPSALSPPCLPHTLL*RQILCANTRMLETN Trigger: ATTTGTTTCCAGCATCCGTGTGTTTGCACAAAGGATTTGACGCCACAGGAGTGTGTGAGGAAGACAGGGCGGGCTGAGGGCAGAAGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR GCA 90 bp | TCACATTGTGAAATGAGGGCTCAGGTCCCTGCCAGCCCTAAGCCATaGTTGAGATCACTGGTGGACAGTTTCTGTTTGCTCAGCCCTGTC | + |
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Preference number: 1 (lower is better) Translates to: SHCEMRAQVPASPKP*LRSLVDSFCLLSPV Trigger: GACAGGGCTGAGCAAACAGAAACTGTCCACCAGTGATCTCAAGCATGGCTTAGGGCTGGCAGGGACCTGAGCCCTCATTTCACAATGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR CCA 90 bp | CAGCATCCAAAGGAATCTGTTGGGCAGTGGGGTGTGAGAACAAAGTaGAGGAGATCCTGGAGGTCAGGTACTCAGCACACTGATGTGGGA | + |
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Preference number: 1 (lower is better) Translates to: QHPKESVGQWGVRTK*RRSWRSGTQHTDVG Trigger: TCCCACATCAGTGTGCTGAGTACCTGACCTCCAGGATCTCCTCCACTTTGTTCTCACACCCCACTGCCCAACAGATTCCTTTGGATGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR TCA 90 bp | GAGATCACTGGTGGACAGTTTCTGTTTGCTCAGCCCTGTCAAGAGTaGGGACCTATAATTAGGCCCCGCAGCACATGCTCTCTAGCCTCT | + |
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Preference number: 1 (lower is better) Translates to: EITGGQFLFAQPCQE*GPIIRPRSTCSLAS Trigger: AGAGGCTAGAGAGCATGTGCTGCGGGGCCTAATTATAGGTCCTCACTCTTGACAGGGCTGAGCAAACAGAAACTGTCCACCAGTGATCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR GCA 90 bp | CCAGGATGCTCGAGCAATGCCTGCCACACCTCTCCCACCATGGTGTaGTTTCTCCCAAGGCTGAACTCTCAGCTGAAATTAGTTGTGATA | + |
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Preference number: 1 (lower is better) Translates to: PGCSSNACHTSPTMV*FLPRLNSQLKLVVI Trigger: TATCACAACTAATTTCAGCTGAGAGTTCAGCCTTGGGAGAAAGCACACCATGGTGGGAGAGGTGTGGCAGGCATTGCTCGAGCATCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR CCA 90 bp | AGCTATGCTCTCAGCAGTCAAGAGCGACCCTTTCCTTTCCCTCTTTaGCTGAGATTTGCAGCTGTGTGTGGCTGTATGCCAGGGCCATTT | + |
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Preference number: 1 (lower is better) Translates to: SYALSSQERPFPFPL*LRFAAVCGCMPGPF Trigger: AAATGGCCCTGGCATACAGCCACACACAGCTGCAAATCTCAGCCAAAGAGGGAAAGGAAAGGGTCGCTCTTGACTGCTGAGAGCATAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR TCA 90 bp | ATGCTCTCAGCAGTCAAGAGCGACCCTTTCCTTTCCCTCTTTGGCTaGGATTTGCAGCTGTGTGTGGCTGTATGCCAGGGCCATTTAATG | + |
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Preference number: 1 (lower is better) Translates to: MLSAVKSDPFLSLFG*DLQLCVAVCQGHLM Trigger: CATTAAATGGCCCTGGCATACAGCCACACACAGCTGCAAATCTCAGCCAAAGAGGGAAAGGAAAGGGTCGCTCTTGACTGCTGAGAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR TCA 90 bp | CACAGCACGGCTTTCTGCACCACCTTCCTTAAAGAGCTCAGCAGATaGGGCTGGGACAGGCAACTACTTCCTCCTCAAACCTTGTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: HSTAFCTTFLKELSR*GWDRQLLPPQTLFF Trigger: AAAGAACAAGGTTTGAGGAGGAAGTAGTTGCCTGTCCCAGCCTCATCTGCTGAGCTCTTTAAGGAAGGTGGTGCAGAAAGCCGTGCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR GCA 90 bp | AGGCAGTCCATCCTTCATGATCGTGACTTATTTCTGCCCAAAGTGTaGTCAGGATCCCCTGCCCTCAGGCTTAATAGACATAGGGTGGTC | + |
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Preference number: 1 (lower is better) Translates to: RQSILHDRDLFLPKV*SGSPALRLNRHRVV Trigger: GACCACCCTATGTCTATTAAGCCTGAGGGCAGGGGATCCTGAGCACACTTTGGGCAGAAATAAGTCACGATCATGAAGGATGGACTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR CCA 90 bp | CACAGAAGACAGGTCTTTCAAAAATCGCATACACCAGAGCAGAGCTaGGACTGTACCAGTCCTCTGTTCCTTCCCAGGACATTGTGGGGA | + |
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Preference number: 1 (lower is better) Translates to: HRRQVFQKSHTPEQS*DCTSPLFLPRTLWG Trigger: TCCCCACAATGTCCTGGGAAGGAACAGAGGACTGGTACAGTCCCAGCTCTGCTCTGGTGTATGCGATTTTTGAAAGACCTGTCTTCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR CCA 90 bp | ACCTATACCTCTTTCCTGTTCCAGACAGCATCCAAAGGAATCTGTTaGGCAGTGGGGTGTGAGAACAAAGTGGAGGAGATCCTGGAGGTC | + |
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Preference number: 1 (lower is better) Translates to: TYTSFLFQTASKGIC*AVGCENKVEEILEV Trigger: GACCTCCAGGATCTCCTCCACTTTGTTCTCACACCCCACTGCCCAACAGATTCCTTTGGATGCTGTCTGGAACAGGAAAGAGGTATAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR CCA 90 bp | ACACACTCCTGTGGCGTCAAATCCTTTGTGCAAACACACGGATGCTaGAAACAAATGAGTTTAATTTCAGGCTCTGCTGAGACCAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: THSCGVKSFVQTHGC*KQMSLISGSAETRA Trigger: AGCCCTGGTCTCAGCAGAGCCTGAAATTAAACTCATTTGTTTCCAGCATCCGTGTGTTTGCACAAAGGATTTGACGCCACAGGAGTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR TCA 90 bp | AACACACGGATGCTGGAAACAAATGAGTTTAATTTCAGGCTCTGCTaGGACCAGGGCTGCTCAGATTCCAGGTACATTAGCTATGCTCTC | + |
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Preference number: 1 (lower is better) Translates to: NTRMLETNEFNFRLC*DQGCSDSRYISYAL Trigger: GAGAGCATAGCTAATGTACCTGGAATCTGAGCAGCCCTGGTCTCAGCAGAGCCTGAAATTAAACTCATTTGTTTCCAGCATCCGTGTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR TCA 90 bp | TGTGGCTGTATGCCAGGGCCATTTAATGAATCTCATACAAGTTGCTaGCAATCAAATCCCAATCAATTTCCACACAGGGCCAGGTCCTCA | + |
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Preference number: 1 (lower is better) Translates to: CGCMPGPFNESHTSC*QSNPNQFPHRARSS Trigger: TGAGGACCTGGCCCTGTGTGGAAATTGATTGGGATTTGATTGTCAGCAACTTGTATGAGATTCATTAAATGGCCCTGGCATACAGCCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR TCA 90 bp | ATGGTTGAGCTGTCCAATGCTCCTAAGAGGATTGGCCTTTCTCCGTaGTGCTGGACTACAGTCAATAATAAAAACAACCACTGGGTTTTC | + |
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Preference number: 1 (lower is better) Translates to: MVELSNAPKRIGLSP*CWTTVNNKNNHWVF Trigger: GAAAACCCAGTGGTTGTTTTTATTATTGACTGTAGTCCAGCATCACGGAGAAAGGCCAATCCTCTTAGGAGCATTGGACAGCTCAACCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR TCA 90 bp | ACAGCGTTTATCAGATGCTTAGCTAGCGTTCAGGCATCCCAAGAATaGGCAAAGACTATTTCCACTTTACTACCTTACGTAGACACTCGG | + |
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Preference number: 1 (lower is better) Translates to: TAFIRCLASVQASQE*AKTISTLLPYVDTR Trigger: CCGAGTGTCTACGTAAGGTAGTAAAGTGGAAATAGTCTTTGCTCATTCTTGGGATGCCTGAACGCTAGCTAAGCATCTGATAAACGCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR GCA 90 bp | AAAGACTATTTCCACTTTACTACCTTACGTAGACACTCGGGTGTCTaGCCCCAGCTAGGCTGCCATTTTCATTTACTGCAAATCTCATCT | + |
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Preference number: 1 (lower is better) Translates to: KDYFHFTTLRRHSGV*PQLGCHFHLLQISS Trigger: AGATGAGATTTGCAGTAAATGAAAATGGCAGCCTAGCTGGGGGCAGACACCCGAGTGTCTACGTAAGGTAGTAAAGTGGAAATAGTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR CCA 90 bp | CTAAGTCTGCTTACTCAAAATCCAGTATTATTTCTGCTGTTAGTTTaGCTAAACTCACTAAAGTACGTGCGGGCACCTCGGCAGATTCCC | + |
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Preference number: 1 (lower is better) Translates to: LSLLTQNPVLFLLLV*LNSLKYVRAPRQIP Trigger: GGGAATCTGCCGAGGTGCCCGCACGTACTTTAGTGAGTTTAGCCAAACTAACAGCAGAAATAATACTGGATTTTGAGTAAGCAGACTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR-3UTR CCA 90 bp | GAGCTGGCCTCAGAGGTGGAGGGCAGACCACACAGGGAAAGCACAGCACGGCTTTCTGTGGCAGGAAGCTaGGGGGCTCTCCCCCATCCA | + |
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Preference number: 2 (lower is better) Translates to: ELASEVEGRPHRESTARLSVAGS*GALPHP Trigger: TGGATGGGGGAGAGCCCCCCAGCTTCCTGCCACAGA...AAGCCGTGCTGTGCTTTCCCTGTGTGGTCTGCCCTCCACCTCTGAGGCCAGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR-3UTR GCA 90 bp | GAGAGCCAGGATGCTCGAGCAATGCCTGCCACACCTCTCCCACCATGGTGTGCTAGGCGGAAGCAGGTCTaGTCCACTGCACATGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: ESQDARAMPATPLPPWCARRKQV*STAHEH Trigger: GTGCTCATGTGCAGTGGAGCAGACCTGCTTCCGCCT...AGCACACCATGGTGGGAGAGGTGTGGCAGGCATTGCTCGAGCATCCTGGCTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR-3UTR TCA 90 bp | GAGCTGGCCTCAGAGGTGGAGGGCAGACCACACAGGGAAAGCACAGCACGGCTTAATTTCAGGCTCTGCTaGGACCAGGGCTGCTCAGAT | + |
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Preference number: 2 (lower is better) Translates to: ELASEVEGRPHRESTARLNFRLC*DQGCSD Trigger: ATCTGAGCAGCCCTGGTCTCAGCAGAGCCTGAAATT...AAGCCGTGCTGTGCTTTCCCTGTGTGGTCTGCCCTCCACCTCTGAGGCCAGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR CAA 90 bp | CTAAAGAAACCACTATCTAGAGAGGGACCAGGCCCTTCACAGCTCTaGTCTTTCCCACCAGCGTGGCCCTGCAGCCCTGTCCAAGGCGGA | + |
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Preference number: 2 (lower is better) Translates to: LKKPLSREGPGPSQL*SFPPAWPCSPVQGG Trigger: TCCGCCTTGGACAGGGCTGCAGGGCCACGCTGGTGGGAAAGACAAGAGCTGTGAAGGGCCTGGTCCCTCTCTAGATAGTGGTTTCTTTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR-3UTR GCA 90 bp | CCCAAAGTGTGCTCAGGATCCCCTGCCCTCAGGCTTAATAGACATAGGGTGGTCCTGGCCCTTCAGTCGTaGAGAGTGGCAGTGGATAGG | + |
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Preference number: 2 (lower is better) Translates to: PKVCSGSPALRLNRHRVVLALQS*RVAVDR Trigger: CCTATCCACTGCCACTCTGCACGACTGAAGGGCCAG...GACCACCCTATGTCTATTAAGCCTGAGGGCAGGGGATCCTGAGCACACTTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR CAA 90 bp | CATTGTGAAATGAGGGCTCAGGTCCCTGCCAGCCCTAAGCCATGCTaGAGATCACTGGTGGACAGTTTCTGTTTGCTCAGCCCTGTCAAG | + |
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Preference number: 2 (lower is better) Translates to: HCEMRAQVPASPKPC*RSLVDSFCLLSPVK Trigger: CTTGACAGGGCTGAGCAAACAGAAACTGTCCACCAGTGATCTCAAGCATGGCTTAGGGCTGGCAGGGACCTGAGCCCTCATTTCACAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR CAA 90 bp | ATCCATCCCAGTAAGCAAAGCTTTCATAGCTGGGCTCCTTATCCATaGCCGGAGGAGAAAACCCTTAGAGGGCTGCTGTGCCCTCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: IHPSKQSFHSWAPYP*PEEKTLRGLLCPLV Trigger: CACCAGAGGGCACAGCAGCCCTCTAAGGGTTTTCTCCTCCGGCAATGGATAAGGAGCCCAGCTATGAAAGCTTTGCTTACTGGGATGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR-3UTR TCA 90 bp | ATGATCGTGACTTATTTCTGCCCAAAGTGTGCTCAGGATCCCCTGCCCTCAGGCTTGGGCAGTGGGGTGTaGGAACAAAGTGGAGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: MIVTYFCPKCAQDPLPSGLGSGV*EQSGGD Trigger: ATCTCCTCCACTTTGTTCTCACACCCCACTGCCCAA...GCCTGAGGGCAGGGGATCCTGAGCACACTTTGGGCAGAAATAAGTCACGATCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR-3UTR TCA 90 bp | ATGATCGTGACTTATTTCTGCCCAAAGTGTGCTCAGGATCCCCTGCCCTCAGGCAAAGAGCTCAGCAGATaGGGCTGGGACAGGCAACTA | + |
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Preference number: 2 (lower is better) Translates to: MIVTYFCPKCAQDPLPSGKELSR*GWDRQL Trigger: TAGTTGCCTGTCCCAGCCTCATCTGCTGAGCTCTTT...GCCTGAGGGCAGGGGATCCTGAGCACACTTTGGGCAGAAATAAGTCACGATCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR CAA 90 bp | GGGACAGGCAACTACTTCCTCCTCAAACCTTGTTCTTTTTCCCCTTaGCACCTGCTGGGCACTTTCAGCTTAGCTGCTCTACCTGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: GTGNYFLLKPCSFSP*HLLGTFSLAALPVS Trigger: GGACACAGGTAGAGCAGCTAAGCTGAAAGTGCCCAGCAGGTGCAAAGGGGAAAAAGAACAAGGTTTGAGGAGGAAGTAGTTGCCTGTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR CAA 90 bp | TGCCCTATCCCACCCTGTGGTGTCCACTGTGTCTATAGCACATGCTaGCAGGCTGGTCCTCCTGAAACCTTTTCCAGAGCATCCTTAGTT | + |
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Preference number: 2 (lower is better) Translates to: CPIPPCGVHCVYSTC*QAGPPETFSRASLV Trigger: AACTAAGGATGCTCTGGAAAAGGTTTCAGGAGGACCAGCCTGCAAGCATGTGCTATAGACACAGTGGACACCACAGGGTGGGATAGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205108.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGCTCAGATTCCAGGTACATTAGCTATGCTCTCAGCAGTCAAGAGCGACCCTTCGGGTGGGAAGTTTTaGGTAAGGGTGAGGGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: AAQIPGTLAMLSAVKSDPSGGKF*VRVRVL Trigger: AAGCACCCTCACCCTTACTCAAAACTTCCCACCCGA...AGGGTCGCTCTTGACTGCTGAGAGCATAGCTAATGTACCTGGAATCTGAGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR-3UTR GCA 90 bp | CCCAAAGTGTGCTCAGGATCCCCTGCCCTCAGGCTTAATAGACATAGGGTGGTCTGGACAGTTTCTGTTTaGTCAGCCCTGTCAAGAGTG | + |
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Preference number: 2 (lower is better) Translates to: PKVCSGSPALRLNRHRVVWTVSV*SALSRV Trigger: CACTCTTGACAGGGCTGAGCAAACAGAAACTGTCCA...GACCACCCTATGTCTATTAAGCCTGAGGGCAGGGGATCCTGAGCACACTTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR-3UTR CCA 90 bp | TGCTCTCAGCAGTCAAGAGCGACCCTTTCCTTTCCCTCTTTGGCTGAGATTTGCGAACTGTGGCTAACATaGATGCCCAGCTCTCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: CSQQSRATLSFPSLAEICELWLT*MPSSPP Trigger: TGGAGGAGAGCTGGGCATCCATGTTAGCCACAGTTC...GCAAATCTCAGCCAAAGAGGGAAAGGAAAGGGTCGCTCTTGACTGCTGAGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR-3UTR GCA 90 bp | CTGTCCATCAGCAAGAGATACCAGTTTGTCATGAGTTTGTCCCATCTCTTGTGTTGTCTCACTGCCTTCTaGCCTCAGCCCGCCCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: LSISKRYQFVMSLSHLLCCLTAF*PQPALS Trigger: AGACAGGGCGGGCTGAGGGCAGAAGGCAGTGAGACA...ACACAAGAGATGGGACAAACTCATGACAAACTGGTATCTCTTGCTGATGGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR-3UTR TCA 90 bp | TATCCATTGCCGGAGGAGAAAACCCTTAGAGGGCTGCTGTGCCCTCTGGTGGTAGATACCAGTTTGTCATaGGTTTGTCCCATCTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: YPLPEEKTLRGLLCPLVVDTSLS*VCPISC Trigger: ACAAGAGATGGGACAAACTCATGACAAACTGGTATC...TACCACCAGAGGGCACAGCAGCCCTCTAAGGGTTTTCTCCTCCGGCAATGGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR-3UTR CCA 90 bp | TGGTGCCCTATCCCACCCTGTGGTGTCCACTGTGTCTATAGCACATGCTTGCAGACAACAGCTTCTTATTaGCATGACTCTCATCACACC | + |
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Preference number: 2 (lower is better) Translates to: WCPIPPCGVHCVYSTCLQTTASY*HDSHHT Trigger: GGTGTGATGAGAGTCATGCCAATAAGAAGCTGTTGT...CTGCAAGCATGTGCTATAGACACAGTGGACACCACAGGGTGGGATAGGGCACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205108.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCTGCCCTCAGGCTTAATAGACATAGGGTGGTCTTCTGGGAAGTTATTTACTGGTGTGAGAACAAAGTaGAGGAGATCCTGGAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: PLPSGLIDIGWSSGKLFTGVRTK*RRSWRS Trigger: TGACCTCCAGGATCTCCTCCACTTTGTTCTCACACC...AGTAAATAACTTCCCAGAAGACCACCCTATGTCTATTAAGCCTGAGGGCAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR-3UTR GCA 90 bp | CCCCTGCCCTCAGGCTTAATAGACATAGGGTGGTCTTCTGGGAAGTTATTTACTGCGTCAAATCCTTTGTaGAAACACACGGATGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: PLPSGLIDIGWSSGKLFTASNPL*KHTDAG Trigger: TCCAGCATCCGTGTGTTTGCACAAAGGATTTGACGC...AGTAAATAACTTCCCAGAAGACCACCCTATGTCTATTAAGCCTGAGGGCAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| 3UTR-3UTR CCA 90 bp | AAATTAGTTGTGATACAAGAACTCAAGTCAGTAATTTCAAGACACGCACACCTGTCTTTCCCACCAGCGTaGCCCTGCAGCCCTGTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: KLVVIQELKSVISRHAHLSFPPA*PCSPVQ Trigger: TTGGACAGGGCTGCAGGGCCACGCTGGTGGGAAAGA...CAGGTGTGCGTGTCTTGAAATTACTGACTTGAGTTCTTGTATCACAACTAATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR-3UTR CCA 90 bp | CCCCTGCCCTCAGGCTTAATAGACATAGGGTGGTCTTCTGGGAAGTTATTTACTAGGGAGACTGTTCTGTaGATAAATGTCTCACTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: PLPSGLIDIGWSSGKLFTRETVL*INVSLP Trigger: AGGCAGTGAGACATTTATCCACAGAACAGTCTCCCT...AGTAAATAACTTCCCAGAAGACCACCCTATGTCTATTAAGCCTGAGGGCAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR-3UTR TCA 90 bp | CCAGGTACATTAGCTATGCTCTCAGCAGTCAAGAGCGACCCTTTCCTTTCCCTCGGTGTCCATTGTCACTaGAATATAAGAACATCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: PGTLAMLSAVKSDPFLSLGVHCH*NIRTSS Trigger: TGAAGATGTTCTTATATTTCAGTGACAATGGACACC...GAGGGAAAGGAAAGGGTCGCTCTTGACTGCTGAGAGCATAGCTAATGTACCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR CAA 90 bp | GCTATGACATTTCAGTTCGCACACGTGATTAGAGACACGTCCTTATaGATTCCTGCAAGAATTCTCTGCATGACAGTTCAGGATGGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: AMTFQFAHVIRDTSL*IPARILCMTVQDGW Trigger: CCAACCATCCTGAACTGTCATGCAGAGAATTCTTGCAGGAATCAATAAGGACGTGTCTCTAATCACGTGTGCGAACTGAAATGTCATAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR-3UTR GCA 90 bp | AAATTAGTTGTGATACAAGAACTCAAGTCAGTAATTTCAAGACACGCACACCTGCTACATACAGGCCTGTaGTCTGTGGCAGGAAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: KLVVIQELKSVISRHAHLLHTGL*SVAGSW Trigger: CCAGCTTCCTGCCACAGAGCACAGGCCTGTATGTAG...CAGGTGTGCGTGTCTTGAAATTACTGACTTGAGTTCTTGTATCACAACTAATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR CAA 90 bp | TGTGTCCCTCTGTCCATCAGCAAGAGATACCAGTTTGTCATGAGTTaGTCCCATCTCTTGTGTTTTGCCATTTGTTTATACATGGAACCC | + |
|
Preference number: 2 (lower is better) Translates to: CVPLSISKRYQFVMS*SHLLCFAICLYMEP Trigger: GGGTTCCATGTATAAACAAATGGCAAAACACAAGAGATGGGACAAACTCATGACAAACTGGTATCTCTTGCTGATGGACAGAGGGACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR CAA 90 bp | AAGGCGGAGGGAACTCAAGTTCCTCATAAGAAGCTAAGGTGTCCATaGTCACTGAAATATAAGAACATCTTCAAGCCCATAGCTTATCAC | + |
|
Preference number: 2 (lower is better) Translates to: KAEGTQVPHKKLRCP*SLKYKNIFKPIAYH Trigger: GTGATAAGCTATGGGCTTGAAGATGTTCTTATATTTCAGTGACAATGGACACCTTAGCTTCTTATGAGGAACTTGAGTTCCCTCCGCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR-3UTR GCA 90 bp | CTCCTAAGTCTGCTTACTCAAAATCCAGTATTATTTCTGCTGTTAGTTTGGCTAGTTCTTTTTCCCCTTTaGACCTGCTGGGCACTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: LLSLLTQNPVLFLLLVWLVLFPL*TCWALS Trigger: TGAAAGTGCCCAGCAGGTGCAAAGGGGAAAAAGAAC...TAGCCAAACTAACAGCAGAAATAATACTGGATTTTGAGTAAGCAGACTTAGGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR-3UTR GCA 90 bp | AAATTAGTTGTGATACAAGAACTCAAGTCAGTAATTTCAAGACACGCACACCTGTGCCCCCAGCTAGGCTaGCATTTTCATTTACTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: KLVVIQELKSVISRHAHLCPQLG*HFHLLQ Trigger: TTGCAGTAAATGAAAATGGCAGCCTAGCTGGGGGCA...CAGGTGTGCGTGTCTTGAAATTACTGACTTGAGTTCTTGTATCACAACTAATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR CAA 90 bp | ATACCAGTTTGTCATGAGTTTGTCCCATCTCTTGTGTTTTGCCATTaGTTTATACATGGAACCCACAAACCAATCAAGGAAAGAGCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: IPVCHEFVPSLVFCH*FIHGTHKPIKERAH Trigger: GTGAGCTCTTTCCTTGATTGGTTTGTGGGTTCCATGTATAAACAAATGGCAAAACACAAGAGATGGGACAAACTCATGACAAACTGGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR-3UTR CCA 90 bp | TACCAGTTTGTCATGAGTTTGTCCCATCTCTTGTGTTTTGCCATTTGTTTATACCAAACACACGGATGCTaGAAACAAATGAGTTTAATT | + |
|
Preference number: 2 (lower is better) Translates to: YQFVMSLSHLLCFAICLYQTHGC*KQMSLI Trigger: AATTAAACTCATTTGTTTCCAGCATCCGTGTGTTTG...GTATAAACAAATGGCAAAACACAAGAGATGGGACAAACTCATGACAAACTGGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR TCA 72 bp | CACAGGACAGGAGTTGGGGCTCAGCGCCATGTAGAATaGAATGCCGCGGCTGCGGGAGGCATGGGAGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: HRTGVGAQRHVE*NAAAAGGMGEP Trigger: TGGCTCTCCCATGCCTCCCGCAGCCGCGGCATTTCATTCTACATGGCGCTGAGCCCCAACTCCTGTCCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR GCA 72 bp | CCTTCACAGCTCTTGTCTTTCCCACCAGCGTGGCCCTaGAGCCCTGTCCAAGGCGGAGGGAACTCAAGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: PSQLLSFPPAWP*SPVQGGGNSSS Trigger: GGAACTTGAGTTCCCTCCGCCTTGGACAGGGCTGCAGGGCCACGCTGGTGGGAAAGACAAGAGCTGTGAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR GCA 72 bp | GGAGGCATGGGAGAGCCAGGATGCTCGAGCAATGCCTaGCACACCTCTCCCACCATGGTGTGCTTTCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: GGMGEPGCSSNA*HTSPTMVCFLP Trigger: TGGGAGAAAGCACACCATGGTGGGAGAGGTGTGGCAGGCATTGCTCGAGCATCCTGGCTCTCCCATGCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR GCA 72 bp | TGCGGGAGGCATGGGAGAGCCAGGATGCTCGAGCAATaGCTGCCACACCTCTCCCACCATGGTGTGCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: CGRHGRARMLEQ*LPHLSHHGVLS Trigger: AGAAAGCACACCATGGTGGGAGAGGTGTGGCAGGCATTGCTCGAGCATCCTGGCTCTCCCATGCCTCCCGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR CCA 72 bp | TCAGGCAGGTCAGATCTGATGAGCTGGCCTCAGAGGTaGAGGGCAGACCACACAGGGAAAGCACAGCACGGC | + |
|
Preference number: 3 (lower is better) Translates to: SGRSDLMSWPQR*RADHTGKAQHG Trigger: GCCGTGCTGTGCTTTCCCTGTGTGGTCTGCCCTCCACCTCTGAGGCCAGCTCATCAGATCTGACCTGCCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR TCA 72 bp | ACACAGGGCCAGGTCCTCAGGTGGGAGCACTGTGGATaGGGAACTGTGGCTAACATGGATGCCCAGCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: TQGQVLRWEHCG*GTVANMDAQLS Trigger: GGAGAGCTGGGCATCCATGTTAGCCACAGTTCCTCATCCACAGTGCTCCCACCTGAGGACCTGGCCCTGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR CCA 72 bp | GGTGGGAGCACTGTGGATGAGGAACTGTGGCTAACATaGATGCCCAGCTCTCCTCCAGGCGGAAGCAGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: GGSTVDEELWLT*MPSSPPGGSRS Trigger: AGACCTGCTTCCGCCTGGAGGAGAGCTGGGCATCCATGTTAGCCACAGTTCCTCATCCACAGTGCTCCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR CCA 72 bp | AGGTCCTCAGGTGGGAGCACTGTGGATGAGGAACTGTaGCTAACATGGATGCCCAGCTCTCCTCCAGGCGGA | + |
|
Preference number: 3 (lower is better) Translates to: RSSGGSTVDEEL*LTWMPSSPPGG Trigger: TCCGCCTGGAGGAGAGCTGGGCATCCATGTTAGCCACAGTTCCTCATCCACAGTGCTCCCACCTGAGGACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR CCA 72 bp | GCCCTCAGCCCGCCCTGTCTTCCTCACACACTCCTGTaGCGTCAAATCCTTTGTGCAAACACACGGATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: ALSPPCLPHTLL*RQILCANTRML Trigger: CAGCATCCGTGTGTTTGCACAAAGGATTTGACGCCACAGGAGTGTGTGAGGAAGACAGGGCGGGCTGAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR CCA 72 bp | ACCTGGGTTGTCTCAGGCAGGTCAGATCTGATGAGCTaGCCTCAGAGGTGGAGGGCAGACCACACAGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: TWVVSGRSDLMS*PQRWRADHTGK Trigger: TTTCCCTGTGTGGTCTGCCCTCCACCTCTGAGGCCAGCTCATCAGATCTGACCTGCCTGAGACAACCCAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGCATTTGTCTGTCTAGTACAGGTGGTGCCCTATCCCACCCTGTGGTGTCCGTCTATAGCACATGCTaGCAGGCTGGTCCTCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: PGICLSSTGGALSHPVVSVYSTC*QAGPPE Trigger: TTCAGGAGGACCAGCCTGCAAGCATGTGCTATAGAC...GGACACCACAGGGTGGGATAGGGCACCACCTGTACTAGACAGACAAATGCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205108.2 |
||
| 3UTR TCA 72 bp | GCAGTCAAGAGCGACCCTTTCCTTTCCCTCTTTGGCTaGGATTTGCAGCTGTGTGTGGCTGTATGCCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: AVKSDPFLSLFG*DLQLCVAVCQG Trigger: GCCCTGGCATACAGCCACACACAGCTGCAAATCTCAGCCAAAGAGGGAAAGGAAAGGGTCGCTCTTGACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR GCA 72 bp | GGAGACTGTTCTGTGGATAAATGTCTCACTGCCTTCTaGCCTCAGCCCGCCCTGTCTTCCTCACACACTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GDCSVDKCLTAF*PQPALSSSHTP Trigger: AGGAGTGTGTGAGGAAGACAGGGCGGGCTGAGGGCAGAAGGCAGTGAGACATTTATCCACAGAACAGTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR-3UTR CAA 90 bp | GAGAGCCAGGATGCTCGAGCAATGCCTGCCACACCTCTCCCACCATGGTGTGCTCTTCCTCCTCAAACCTaGTTCTTTTTCCCCTTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: ESQDARAMPATPLPPWCALPPQT*FFFPFA Trigger: TGCAAAGGGGAAAAAGAACAAGGTTTGAGGAGGAAG...AGCACACCATGGTGGGAGAGGTGTGGCAGGCATTGCTCGAGCATCCTGGCTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR TCA 72 bp | AGTCCTCTGTTCCTTCCCAGGACATTGTGGGGACTATaGGCTACATACAGGCCTGTGCTCTGTGGCAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SPLFLPRTLWGL*ATYRPVLCGRK Trigger: CTTCCTGCCACAGAGCACAGGCCTGTATGTAGCTCATAGTCCCCACAATGTCCTGGGAAGGAACAGAGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR GCA 72 bp | GAAATGAGGGCTCAGGTCCCTGCCAGCCCTAAGCCATaGTTGAGATCACTGGTGGACAGTTTCTGTTTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: EMRAQVPASPKP*LRSLVDSFCLL Trigger: GAGCAAACAGAAACTGTCCACCAGTGATCTCAAGCATGGCTTAGGGCTGGCAGGGACCTGAGCCCTCATTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR GCA 72 bp | TTCCCCTTTGCACCTGCTGGGCACTTTCAGCTTAGCTaGTCTACCTGTGTCCCTCTGTCCATCAGCAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: FPFAPAGHFQLS*STCVPLSISKR Trigger: TCTCTTGCTGATGGACAGAGGGACACAGGTAGAGCAGCTAAGCTGAAAGTGCCCAGCAGGTGCAAAGGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR GCA 72 bp | ACAGGCAGTCCATCCTTCATGATCGTGACTTATTTCTaGCCAAAGTGTGCTCAGGATCCCCTGCCCTCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: TGSPSFMIVTYF*PKCAQDPLPSG Trigger: GCCTGAGGGCAGGGGATCCTGAGCACACTTTGGGCAGAAATAAGTCACGATCATGAAGGATGGACTGCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR CCA 72 bp | AGGGCTGCTGTGCCCTCTGGTGGTAAGATGACAACATaGTTGAGCTGTCCAATGCTCCTAAGAGGATTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: RAAVPSGGKMTT*LSCPMLLRGLA Trigger: GGCCAATCCTCTTAGGAGCATTGGACAGCTCAACCATGTTGTCATCTTACCACCAGAGGGCACAGCAGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR TCA 72 bp | GGTGGACAGTTTCTGTTTGCTCAGCCCTGTCAAGAGTaGGGACCTATAATTAGGCCCCGCAGCACATGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: GGQFLFAQPCQE*GPIIRPRSTCS Trigger: AGAGCATGTGCTGCGGGGCCTAATTATAGGTCCTCACTCTTGACAGGGCTGAGCAAACAGAAACTGTCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR TCA 72 bp | GCTTTCTGCACCACCTTCCTTAAAGAGCTCAGCAGATaGGGCTGGGACAGGCAACTACTTCCTCCTCAAACC | + |
|
Preference number: 3 (lower is better) Translates to: AFCTTFLKELSR*GWDRQLLPPQT Trigger: GGTTTGAGGAGGAAGTAGTTGCCTGTCCCAGCCTCATCTGCTGAGCTCTTTAAGGAAGGTGGTGCAGAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR GCA 72 bp | GTAAGCAAAGCTTTCATAGCTGGGCTCCTTATCCATTaGCGGAGGAGAAAACCCTTAGAGGGCTGCTGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: VSKAFIAGLLIH*RRRKPLEGCCA Trigger: GGCACAGCAGCCCTCTAAGGGTTTTCTCCTCCGGCAATGGATAAGGAGCCCAGCTATGAAAGCTTTGCTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR GCA 72 bp | TCGAGCAATGCCTGCCACACCTCTCCCACCATGGTGTaGTTTCTCCCAAGGCTGAACTCTCAGCTGAAATTA | + |
|
Preference number: 3 (lower is better) Translates to: SSNACHTSPTMV*FLPRLNSQLKL Trigger: TAATTTCAGCTGAGAGTTCAGCCTTGGGAGAAAGCACACCATGGTGGGAGAGGTGTGGCAGGCATTGCTCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR GCA 72 bp | CACCCTGTGGTGTCCACTGTGTCTATAGCACATGCTTaGAGGCTGGTCCTCCTGAAACCTTTTCCAGAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: HPVVSTVSIAHA*RLVLLKPFPEH Trigger: ATGCTCTGGAAAAGGTTTCAGGAGGACCAGCCTGCAAGCATGTGCTATAGACACAGTGGACACCACAGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205108.2 |
||
| 3UTR GCA 72 bp | ATCCCACCCTGTGGTGTCCACTGTGTCTATAGCACATaGTTGCAGGCTGGTCCTCCTGAAACCTTTTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: IPPCGVHCVYST*LQAGPPETFSR Trigger: TCTGGAAAAGGTTTCAGGAGGACCAGCCTGCAAGCATGTGCTATAGACACAGTGGACACCACAGGGTGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205108.2 |
||
| 3UTR CCA 72 bp | AAGGAATCTGTTGGGCAGTGGGGTGTGAGAACAAAGTaGAGGAGATCCTGGAGGTCAGGTACTCAGCACACT | + |
|
Preference number: 3 (lower is better) Translates to: KESVGQWGVRTK*RRSWRSGTQHT Trigger: AGTGTGCTGAGTACCTGACCTCCAGGATCTCCTCCACTTTGTTCTCACACCCCACTGCCCAACAGATTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR CCA 72 bp | GCCCCCATCCATCCCAGTAAGCAAAGCTTTCATAGCTaGGCTCCTTATCCATTGCCGGAGGAGAAAACCCTT | + |
|
Preference number: 3 (lower is better) Translates to: APIHPSKQSFHS*APYPLPEEKTL Trigger: AAGGGTTTTCTCCTCCGGCAATGGATAAGGAGCCCAGCTATGAAAGCTTTGCTTACTGGGATGGATGGGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR CCA 72 bp | CAGGTCTTTCAAAAATCGCATACACCAGAGCAGAGCTaGGACTGTACCAGTCCTCTGTTCCTTCCCAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: QVFQKSHTPEQS*DCTSPLFLPRT Trigger: TGTCCTGGGAAGGAACAGAGGACTGGTACAGTCCCAGCTCTGCTCTGGTGTATGCGATTTTTGAAAGACCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR CCA 72 bp | TCTTTCCTGTTCCAGACAGCATCCAAAGGAATCTGTTaGGCAGTGGGGTGTGAGAACAAAGTGGAGGAGATC | + |
|
Preference number: 3 (lower is better) Translates to: SFLFQTASKGIC*AVGCENKVEEI Trigger: GATCTCCTCCACTTTGTTCTCACACCCCACTGCCCAACAGATTCCTTTGGATGCTGTCTGGAACAGGAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR-3UTR CAA 90 bp | CCCCTGCCCTCAGGCTTAATAGACATAGGGTGGTCTTCTGGGAAGTTATTTACTGTGGACAGTTTCTGTTaGCTCAGCCCTGTCAAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: PLPSGLIDIGWSSGKLFTVDSFC*LSPVKS Trigger: ACTCTTGACAGGGCTGAGCAAACAGAAACTGTCCAC...AGTAAATAACTTCCCAGAAGACCACCCTATGTCTATTAAGCCTGAGGGCAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR TCA 72 bp | AGAAGGTCGCTGTGTCGTTTGCTACCATTAGACCTCTaGTCAAACCCCAAATTACCTGGGTTGTCTCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: RRSLCRLLPLDL*SNPKLPGLSQA Trigger: TGCCTGAGACAACCCAGGTAATTTGGGGTTTGATCAGAGGTCTAATGGTAGCAAACGACACAGCGACCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR GCA 72 bp | TTACGTAGACACTCGGGTGTCTGCCCCCAGCTAGGCTaGCATTTTCATTTACTGCAAATCTCATCTCCACAA | + |
|
Preference number: 3 (lower is better) Translates to: LRRHSGVCPQLG*HFHLLQISSPQ Trigger: TTGTGGAGATGAGATTTGCAGTAAATGAAAATGGCAGCCTAGCTGGGGGCAGACACCCGAGTGTCTACGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR GCA 72 bp | TTCCACTTTACTACCTTACGTAGACACTCGGGTGTCTaGCCCCAGCTAGGCTGCCATTTTCATTTACTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: FHFTTLRRHSGV*PQLGCHFHLLQ Trigger: TTGCAGTAAATGAAAATGGCAGCCTAGCTGGGGGCAGACACCCGAGTGTCTACGTAAGGTAGTAAAGTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR-3UTR CAA 90 bp | AAATTAGTTGTGATACAAGAACTCAAGTCAGTAATTTCAAGACACGCACACCTGGGCCCTTCACAGCTCTaGTCTTTCCCACCAGCGTGG | + |
|
Preference number: 3 (lower is better) Translates to: KLVVIQELKSVISRHAHLGPSQL*SFPPAW Trigger: CCACGCTGGTGGGAAAGACAAGAGCTGTGAAGGGCC...CAGGTGTGCGTGTCTTGAAATTACTGACTTGAGTTCTTGTATCACAACTAATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTCCTCTTGTCTGCCCCCATCCATCCCAGTAAGCAAAGCTTTCATAGCTGGCTTGTGTTTTGCCATTaGTTTATACATGGAACCCAC | + |
|
Preference number: 3 (lower is better) Translates to: TVLLSAPIHPSKQSFHSWLVFCH*FIHGTH Trigger: GTGGGTTCCATGTATAAACAAATGGCAAAACACAAG...CCAGCTATGAAAGCTTTGCTTACTGGGATGGATGGGGGCAGACAAGAGGACAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR-3UTR CAA 90 bp | CCCCTGCCCTCAGGCTTAATAGACATAGGGTGGTCTTCTGGGAAGTTATTTACTCAGCCATCTTCAACCTaGGCCAAAGTAATGAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: PLPSGLIDIGWSSGKLFTQPSST*AKVMKK Trigger: CTTCTTCATTACTTTGGCCAAGGTTGAAGATGGCTG...AGTAAATAACTTCCCAGAAGACCACCCTATGTCTATTAAGCCTGAGGGCAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR GCA 72 bp | ATCCTTCATGATCGTGACTTATTTCTGCCCAAAGTGTaGTCAGGATCCCCTGCCCTCAGGCTTAATAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: ILHDRDLFLPKV*SGSPALRLNRH Trigger: ATGTCTATTAAGCCTGAGGGCAGGGGATCCTGAGCACACTTTGGGCAGAAATAAGTCACGATCATGAAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR-3UTR CAA 90 bp | TGCTCTCAGCAGTCAAGAGCGACCCTTTCCTTTCCCTCTTTGGCTGAGATTTGCAAGCTAAGGTGTCCATaGTCACTGAAATATAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: CSQQSRATLSFPSLAEICKLRCP*SLKYKN Trigger: GTTCTTATATTTCAGTGACAATGGACACCTTAGCTT...GCAAATCTCAGCCAAAGAGGGAAAGGAAAGGGTCGCTCTTGACTGCTGAGAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR TCA 72 bp | ATGCTGGAAACAAATGAGTTTAATTTCAGGCTCTGCTaGGACCAGGGCTGCTCAGATTCCAGGTACATTAGC | + |
|
Preference number: 3 (lower is better) Translates to: MLETNEFNFRLC*DQGCSDSRYIS Trigger: GCTAATGTACCTGGAATCTGAGCAGCCCTGGTCTCAGCAGAGCCTGAAATTAAACTCATTTGTTTCCAGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR-3UTR CAA 90 bp | AAATTAGTTGTGATACAAGAACTCAAGTCAGTAATTTCAAGACACGCACACCTGGTCGGGTGGGAAGTTTaGAGTAAGGGTGAGGGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: KLVVIQELKSVISRHAHLVGWEV*SKGEGA Trigger: AGCACCCTCACCCTTACTCAAAACTTCCCACCCGAC...CAGGTGTGCGTGTCTTGAAATTACTGACTTGAGTTCTTGTATCACAACTAATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR TCA 72 bp | CTGTCCAATGCTCCTAAGAGGATTGGCCTTTCTCCGTaGTGCTGGACTACAGTCAATAATAAAAACAACCAC | + |
|
Preference number: 3 (lower is better) Translates to: LSNAPKRIGLSP*CWTTVNNKNNH Trigger: GTGGTTGTTTTTATTATTGACTGTAGTCCAGCATCACGGAGAAAGGCCAATCCTCTTAGGAGCATTGGACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR CCA 72 bp | TGTGGCGTCAAATCCTTTGTGCAAACACACGGATGCTaGAAACAAATGAGTTTAATTTCAGGCTCTGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: CGVKSFVQTHGC*KQMSLISGSAE Trigger: CTCAGCAGAGCCTGAAATTAAACTCATTTGTTTCCAGCATCCGTGTGTTTGCACAAAGGATTTGACGCCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR TCA 72 bp | ATGCCAGGGCCATTTAATGAATCTCATACAAGTTGCTaGCAATCAAATCCCAATCAATTTCCACACAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: MPGPFNESHTSC*QSNPNQFPHRA Trigger: GGCCCTGTGTGGAAATTGATTGGGATTTGATTGTCAGCAACTTGTATGAGATTCATTAAATGGCCCTGGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR TCA 72 bp | ATCAGATGCTTAGCTAGCGTTCAGGCATCCCAAGAATaGGCAAAGACTATTTCCACTTTACTACCTTACGTA | + |
|
Preference number: 3 (lower is better) Translates to: IRCLASVQASQE*AKTISTLLPYV Trigger: TACGTAAGGTAGTAAAGTGGAAATAGTCTTTGCTCATTCTTGGGATGCCTGAACGCTAGCTAAGCATCTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR-3UTR CAA 90 bp | AAATTAGTTGTGATACAAGAACTCAAGTCAGTAATTTCAAGACACGCACACCTGCTTTCCTTTCCCTCTTaGGCTGAGATTTGCAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: KLVVIQELKSVISRHAHLLSFPS*AEICSC Trigger: ACAGCTGCAAATCTCAGCCAAAGAGGGAAAGGAAAG...CAGGTGTGCGTGTCTTGAAATTACTGACTTGAGTTCTTGTATCACAACTAATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR-3UTR CAA 90 bp | TACCAGTTTGTCATGAGTTTGTCCCATCTCTTGTGTTTTGCCATTTGTTTATACTCTCTCTCTCTCGGGTaGGAAGAGAAACAAGATTTG | + |
|
Preference number: 3 (lower is better) Translates to: YQFVMSLSHLLCFAICLYSLSLG*EEKQDL Trigger: CAAATCTTGTTTCTCTTCCAACCCGAGAGAGAGAGA...GTATAAACAAATGGCAAAACACAAGAGATGGGACAAACTCATGACAAACTGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR CAA 72 bp | CCACTATCTAGAGAGGGACCAGGCCCTTCACAGCTCTaGTCTTTCCCACCAGCGTGGCCCTGCAGCCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PLSREGPGPSQL*SFPPAWPCSPV Trigger: GACAGGGCTGCAGGGCCACGCTGGTGGGAAAGACAAGAGCTGTGAAGGGCCTGGTCCCTCTCTAGATAGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| CDS-3UTR CCA 90 bp | CAGAGCAGAGCTGGGACTGTACCAGTCCTCTGTTCCTTCCCAGGACATTGTGGGCTTATCACGATGGCGTaGGTCCTGGGGACTTGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: QSRAGTVPVLCSFPGHCGLITMA*VLGTWS Trigger: CGACCAAGTCCCCAGGACCCACGCCATCGTGATAAG...CCCACAATGTCCTGGGAAGGAACAGAGGACTGGTACAGTCCCAGCTCTGCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| CDS-3UTR CCA 90 bp | GAGAGCCAGGATGCTCGAGCAATGCCTGCCACACCTCTCCCACCATGGTGTGCTCCTGGACTTCATCTCTaGGCCGAGCTGAATTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ESQDARAMPATPLPPWCAPGLHL*AELNFS Trigger: GGAAAAATTCAGCTCGGCCCAGAGATGAAGTCCAGG...AGCACACCATGGTGGGAGAGGTGTGGCAGGCATTGCTCGAGCATCCTGGCTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| CDS-3UTR CCA 90 bp | GAGCTGGCCTCAGAGGTGGAGGGCAGACCACACAGGGAAAGCACAGCACGGCTTGTCATGGTCAACAGCTaGGAAATACACAACCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELASEVEGRPHRESTARLVMVNS*EIHNLL Trigger: CAGGAGGTTGTGTATTTCCCAGCTGTTGACCATGAC...AAGCCGTGCTGTGCTTTCCCTGTGTGGTCTGCCCTCCACCTCTGAGGCCAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| CDS-3UTR CCA 90 bp | CAGAGCAGAGCTGGGACTGTACCAGTCCTCTGTTCCTTCCCAGGACATTGTGGGTCTCCAACTCCAGCATaGTCTTCCTCAGGGTGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: QSRAGTVPVLCSFPGHCGSPTPA*SSSGCD Trigger: GTCGCACCCTGAGGAAGACCATGCTGGAGTTGGAGA...CCCACAATGTCCTGGGAAGGAACAGAGGACTGGTACAGTCCCAGCTCTGCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| CDS-3UTR CCA 90 bp | GGTGCCCTATCCCACCCTGTGGTGTCCACTGTGTCTATAGCACATGCTTGCAGGTCTCCAACTCCAGCATaGTCTTCCTCAGGGTGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: GALSHPVVSTVSIAHACRSPTPA*SSSGCD Trigger: GTCGCACCCTGAGGAAGACCATGCTGGAGTTGGAGA...CCTGCAAGCATGTGCTATAGACACAGTGGACACCACAGGGTGGGATAGGGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205108.2 |
||
| 3UTR CAA 72 bp | ACGTGCGGGCACCTCGGCAGATTCCCTACTGTCCTCTaGTCTGCCCCCATCCATCCCAGTAAGCAAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TCGHLGRFPTVL*SAPIHPSKQSF Trigger: AAAGCTTTGCTTACTGGGATGGATGGGGGCAGACAAGAGGACAGTAGGGAATCTGCCGAGGTGCCCGCACGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| CDS-3UTR TCA 90 bp | CAGAGCAGAGCTGGGACTGTACCAGTCCTCTGTTCCTTCCCAGGACATTGTGGGGTCACCAAAACAGGGTaGCTGTGCTTTGGGGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: QSRAGTVPVLCSFPGHCGVTKTG*LCFGDK Trigger: CTTGTCCCCAAAGCACAGTCACCCTGTTTTGGTGAC...CCCACAATGTCCTGGGAAGGAACAGAGGACTGGTACAGTCCCAGCTCTGCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| CDS-3UTR CCA 90 bp | GAGCTGGCCTCAGAGGTGGAGGGCAGACCACACAGGGAAAGCACAGCACGGCTTAGGTTCCTTTTTGGCTaGGTCATCGTCACCAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: ELASEVEGRPHRESTARLRFLFG*VIVTKT Trigger: TGTTTTGGTGACGATGACCCAGCCAAAAAGGAACCT...AAGCCGTGCTGTGCTTTCCCTGTGTGGTCTGCCCTCCACCTCTGAGGCCAGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| CDS-3UTR CCA 90 bp | TGCTCTCAGCAGTCAAGAGCGACCCTTTCCTTTCCCTCTTTGGCTGAGATTTGCCTCATGTCGGCGGTCTaGCTTCTCCTGGAACCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CSQQSRATLSFPSLAEICLMSAV*LLLEPR Trigger: CCTCGGTTCCAGGAGAAGCCAGACCGCCGACATGAG...GCAAATCTCAGCCAAAGAGGGAAAGGAAAGGGTCGCTCTTGACTGCTGAGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR CAA 72 bp | ATGAGGGCTCAGGTCCCTGCCAGCCCTAAGCCATGCTaGAGATCACTGGTGGACAGTTTCTGTTTGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MRAQVPASPKPC*RSLVDSFCLLS Trigger: GCTGAGCAAACAGAAACTGTCCACCAGTGATCTCAAGCATGGCTTAGGGCTGGCAGGGACCTGAGCCCTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| CDS-3UTR TCA 90 bp | GCATACACCAGAGCAGAGCTGGGACTGTACCAGTCCTCTGTTCCTTCCCAGGACGGGGACTTGGTCGATTaGGATGTAAGTGCACTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: AYTRAELGLYQSSVPSQDGDLVD*DVSALN Trigger: GTTGAGTGCACTTACATCTCAATCGACCAAGTCCCC...GTCCTGGGAAGGAACAGAGGACTGGTACAGTCCCAGCTCTGCTCTGGTGTATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| CDS-3UTR CCA 90 bp | GCTGCTCAGATTCCAGGTACATTAGCTATGCTCTCAGCAGTCAAGAGCGACCCTGGACCTGGAAGGATCTaGGGTCCCGGTGAAGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AAQIPGTLAMLSAVKSDPGPGRI*GPGEVV Trigger: CACTACTTCACCGGGACCCCAGATCCTTCCAGGTCC...AGGGTCGCTCTTGACTGCTGAGAGCATAGCTAATGTACCTGGAATCTGAGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| CDS-3UTR CCA 90 bp | GGCATTTGTCTGTCTAGTACAGGTGGTGCCCTATCCCACCCTGTGGTGTCCACTTCAGAATCTCGTCCATaGCCTCCAGGCCTTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GICLSSTGGALSHPVVSTSESRP*PPGLAS Trigger: AGAAGCAAGGCCTGGAGGCCATGGACGAGATTCTGA...AGTGGACACCACAGGGTGGGATAGGGCACCACCTGTACTAGACAGACAAATGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205108.2 |
||
| 3UTR CAA 72 bp | CCACCCTGTGGTGTCCACTGTGTCTATAGCACATGCTaGCAGGCTGGTCCTCCTGAAACCTTTTCCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPCGVHCVYSTC*QAGPPETFSRA Trigger: TGCTCTGGAAAAGGTTTCAGGAGGACCAGCCTGCAAGCATGTGCTATAGACACAGTGGACACCACAGGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205108.2 |
||
| CDS-3UTR TCA 90 bp | GCATACACCAGAGCAGAGCTGGGACTGTACCAGTCCTCTGTTCCTTCCCAGGACATCTCTGGGCCGAGCTaGATTTTTCCCAAATACCAC | + |
|
Preference number: 4 (lower is better) Translates to: AYTRAELGLYQSSVPSQDISGPS*IFPKYH Trigger: GTGGTATTTGGGAAAAATTCAGCTCGGCCCAGAGAT...GTCCTGGGAAGGAACAGAGGACTGGTACAGTCCCAGCTCTGCTCTGGTGTATGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| CDS-3UTR CCA 90 bp | CAGATTCCAGGTACATTAGCTATGCTCTCAGCAGTCAAGAGCGACCCTTTCCTTCGATGGCGTGGGTCCTaGGGACTTGGTCGATTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QIPGTLAMLSAVKSDPFLRWRGS*GLGRLR Trigger: TCTCAATCGACCAAGTCCCCAGGACCCACGCCATCG...AAGGAAAGGGTCGCTCTTGACTGCTGAGAGCATAGCTAATGTACCTGGAATCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| CDS-3UTR GCA 90 bp | CCAGGTACATTAGCTATGCTCTCAGCAGTCAAGAGCGACCCTTTCCTTTCCCTCGTCCTGAGTTCTGGGTaGTCTTCATCCAGCTTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGTLAMLSAVKSDPFLSLVLSSG*SSSSLV Trigger: GACTAAGCTGGATGAAGAGCACCCAGAACTCAGGAC...GAGGGAAAGGAAAGGGTCGCTCTTGACTGCTGAGAGCATAGCTAATGTACCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| CDS-3UTR GCA 90 bp | GAGAGCCAGGATGCTCGAGCAATGCCTGCCACACCTCTCCCACCATGGTGTGCTATGTTAATCATCGTCTaGACAGTGATGCTTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ESQDARAMPATPLPPWCAMLIIV*TVMLSS Trigger: AGAAGAAAGCATCACTGTGCAGACGATGATTAACAT...AGCACACCATGGTGGGAGAGGTGTGGCAGGCATTGCTCGAGCATCCTGGCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| CDS-3UTR CCA 90 bp | CCAGGTACATTAGCTATGCTCTCAGCAGTCAAGAGCGACCCTTTCCTTTCCCTCGTCGCGAGGGAAAGATaGTTGCAAATGCACCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: PGTLAMLSAVKSDPFLSLVARER*LQMHLT Trigger: AGTGAGGTGCATTTGCAACCATCTTTCCCTCGCGAC...GAGGGAAAGGAAAGGGTCGCTCTTGACTGCTGAGAGCATAGCTAATGTACCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR CAA 72 bp | GCTGCTGTGCCCTCTGGTGGTAAGATGACAACATGGTaGAGCTGTCCAATGCTCCTAAGAGGATTGGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AAVPSGGKMTTW*SCPMLLRGLAF Trigger: AAAGGCCAATCCTCTTAGGAGCATTGGACAGCTCAACCATGTTGTCATCTTACCACCAGAGGGCACAGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR CAA 72 bp | AGTAAGCAAAGCTTTCATAGCTGGGCTCCTTATCCATaGCCGGAGGAGAAAACCCTTAGAGGGCTGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SKQSFHSWAPYP*PEEKTLRGLLC Trigger: GCACAGCAGCCCTCTAAGGGTTTTCTCCTCCGGCAATGGATAAGGAGCCCAGCTATGAAAGCTTTGCTTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR CAA 72 bp | TCAGCTTGTGAGGCCGACTCCTACAGACACTGGAGCTaGTGTTGGGCTAAGTCTCCACAGCGTTTATCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SACEADSYRHWS*CWAKSPQRLSD Trigger: ATCTGATAAACGCTGTGGAGACTTAGCCCAACACAAGCTCCAGTGTCTGTAGGAGTCGGCCTCACAAGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| CDS-3UTR TCA 90 bp | AACTCTCGGTTTACTCACACAGAAGAGTGTTTATCTGCTGGTAATTTAGTCGGGCCTCGTCACTCTCGATaGCAGCACGTGCCCACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: NSRFTHTEECLSAGNLVGPRHSR*QHVPTR Trigger: ACGAGTGGGCACGTGCTGTCATCGAGAGTGACGAGG...CCCGACTAAATTACCAGCAGATAAACACTCTTCTGTGTGAGTAAACCGAGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| CDS-3UTR GCA 90 bp | TGCTCTCAGCAGTCAAGAGCGACCCTTTCCTTTCCCTCTTTGGCTGAGATTTGCTGGCTTCGTTGGCTATaGATACCCCATGTTCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: CSQQSRATLSFPSLAEICWLRWL*IPHVHW Trigger: CCAATGAACATGGGGTATGCATAGCCAACGAAGCCA...GCAAATCTCAGCCAAAGAGGGAAAGGAAAGGGTCGCTCTTGACTGCTGAGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| CDS-3UTR GCA 90 bp | ACTGTCCTCTTGTCTGCCCCCATCCATCCCAGTAAGCAAAGCTTTCATAGCTGGGTCCACCAGCAGATATaGACTTTGGAAGCTATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TVLLSAPIHPSKQSFHSWVHQQI*TLEAMA Trigger: TGCCATAGCTTCCAAAGTGCATATCTGCTGGTGGAC...CCAGCTATGAAAGCTTTGCTTACTGGGATGGATGGGGGCAGACAAGAGGACAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| CDS-3UTR TCA 90 bp | CCCCTGCCCTCAGGCTTAATAGACATAGGGTGGTCTTCTGGGAAGTTATTTACTGGTGAACTTCTGTTCTaGGGCAAGACAGACACTATA | + |
|
Preference number: 4 (lower is better) Translates to: PLPSGLIDIGWSSGKLFTGELLF*GKTDTI Trigger: TATAGTGTCTGTCTTGCCTCAGAACAGAAGTTCACC...AGTAAATAACTTCCCAGAAGACCACCCTATGTCTATTAAGCCTGAGGGCAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| CDS-3UTR GCA 90 bp | CTCCTAAGTCTGCTTACTCAAAATCCAGTATTATTTCTGCTGTTAGTTTGGCTATGGTCTTCCTCAGGGTaGGACCTTGCTCCTCGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLSLLTQNPVLFLLLVWLWSSSG*DLAPRH Trigger: GTGACGAGGAGCAAGGTCGCACCCTGAGGAAGACCA...TAGCCAAACTAACAGCAGAAATAATACTGGATTTTGAGTAAGCAGACTTAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| CDS-3UTR CCA 90 bp | AACTCTCGGTTTACTCACACAGAAGAGTGTTTATCTGCTGGTAATTTAGTCGGGACCGAGGTTCCTTTTTaGCTGGGTCATCGTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: NSRFTHTEECLSAGNLVGTEVPF*LGHRHQ Trigger: TTGGTGACGATGACCCAGCCAAAAAGGAACCTCGGT...CCCGACTAAATTACCAGCAGATAAACACTCTTCTGTGTGAGTAAACCGAGAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR CAA 72 bp | TCCTGCAAGAATTCTCTGCATGACAGTTCAGGATGGTaGGCTTCAGTCAGTAAAAACACGTGTGACACACAC | + |
|
Preference number: 4 (lower is better) Translates to: SCKNSLHDSSGW*ASVSKNTCDTH Trigger: GTGTGTGTCACACGTGTTTTTACTGACTGAAGCCAACCATCCTGAACTGTCATGCAGAGAATTCTTGCAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| CDS-3UTR GCA 90 bp | TTTGGTATGAACAAAAGCCTTTTGTTAACCCTAAAGAAACCACTATCTAGAGAGACGTGCCCACTCGTGTaGCTTGTACAGCTCATGTCG | + |
|
Preference number: 4 (lower is better) Translates to: FGMNKSLLLTLKKPLSRETCPLV*LVQLMS Trigger: CGACATGAGCTGTACAAGGCACACGAGTGGGCACGT...CTCTCTAGATAGTGGTTTCTTTAGGGTTAACAAAAGGCTTTTGTTCATACCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR CAA 72 bp | GCTTACTCAAAATCCAGTATTATTTCTGCTGTTAGTTaGGCTAAACTCACTAAAGTACGTGCGGGCACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: AYSKSSIISAVS*AKLTKVRAGTS Trigger: CGAGGTGCCCGCACGTACTTTAGTGAGTTTAGCCAAACTAACAGCAGAAATAATACTGGATTTTGAGTAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR CAA 72 bp | TTTCAGTTCGCACACGTGATTAGAGACACGTCCTTATaGATTCCTGCAAGAATTCTCTGCATGACAGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FQFAHVIRDTSL*IPARILCMTVQ Trigger: CTGAACTGTCATGCAGAGAATTCTTGCAGGAATCAATAAGGACGTGTCTCTAATCACGTGTGCGAACTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| CDS-3UTR CCA 90 bp | AAATTAGTTGTGATACAAGAACTCAAGTCAGTAATTTCAAGACACGCACACCTGGTCCTTAGCTCGAGGTaGCAGAGCCACAAAAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KLVVIQELKSVISRHAHLVLSSR*QSHKRV Trigger: TACTCTTTTGTGGCTCTGCCACCTCGAGCTAAGGAC...CAGGTGTGCGTGTCTTGAAATTACTGACTTGAGTTCTTGTATCACAACTAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| CDS-3UTR CCA 90 bp | TTTGGTATGAACAAAAGCCTTTTGTTAACCCTAAAGAAACCACTATCTAGAGAGTCAGAATCTCGTCCATaGCCTCCAGGCCTTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FGMNKSLLLTLKKPLSRESESRP*PPGLAS Trigger: AGAAGCAAGGCCTGGAGGCCATGGACGAGATTCTGA...CTCTCTAGATAGTGGTTTCTTTAGGGTTAACAAAAGGCTTTTGTTCATACCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| CDS-3UTR TCA 90 bp | TTTGGTATGAACAAAAGCCTTTTGTTAACCCTAAAGAAACCACTATCTAGAGAGGTTCTAAGCCAAGCCTaGCCAGATCCATTCCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FGMNKSLLLTLKKPLSREVLSQA*PDPFPV Trigger: TACTGGGAATGGATCTGGTCAGGCTTGGCTTAGAAC...CTCTCTAGATAGTGGTTTCTTTAGGGTTAACAAAAGGCTTTTGTTCATACCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| CDS-3UTR CCA 90 bp | AAATTAGTTGTGATACAAGAACTCAAGTCAGTAATTTCAAGACACGCACACCTGAAATACACAACCTCCTaGACTTCATCTCTGGGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: KLVVIQELKSVISRHAHLKYTTS*TSSLGR Trigger: TCGGCCCAGAGATGAAGTCCAGGAGGTTGTGTATTT...CAGGTGTGCGTGTCTTGAAATTACTGACTTGAGTTCTTGTATCACAACTAATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR CAA 72 bp | CCACACACAAAAGCCTTTGGTATGAACAAAAGCCTTTaGTTAACCCTAAAGAAACCACTATCTAGAGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PHTKAFGMNKSL*LTLKKPLSREG Trigger: TCCCTCTCTAGATAGTGGTTTCTTTAGGGTTAACAAAAGGCTTTTGTTCATACCAAAGGCTTTTGTGTGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR CAA 72 bp | CTGTCCATCAGCAAGAGATACCAGTTTGTCATGAGTTaGTCCCATCTCTTGTGTTTTGCCATTTGTTTATAC | + |
|
Preference number: 4 (lower is better) Translates to: LSISKRYQFVMS*SHLLCFAICLY Trigger: GTATAAACAAATGGCAAAACACAAGAGATGGGACAAACTCATGACAAACTGGTATCTCTTGCTGATGGACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR CAA 72 bp | GGAACTCAAGTTCCTCATAAGAAGCTAAGGTGTCCATaGTCACTGAAATATAAGAACATCTTCAAGCCCATA | + |
|
Preference number: 4 (lower is better) Translates to: GTQVPHKKLRCP*SLKYKNIFKPI Trigger: TATGGGCTTGAAGATGTTCTTATATTTCAGTGACAATGGACACCTTAGCTTCTTATGAGGAACTTGAGTTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| 3UTR CAA 72 bp | TGTCATGAGTTTGTCCCATCTCTTGTGTTTTGCCATTaGTTTATACATGGAACCCACAAACCAATCAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CHEFVPSLVFCH*FIHGTHKPIKE Trigger: TTCCTTGATTGGTTTGTGGGTTCCATGTATAAACAAATGGCAAAACACAAGAGATGGGACAAACTCATGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
||
| CDS-3UTR GCA 90 bp | TACCAGTTTGTCATGAGTTTGTCCCATCTCTTGTGTTTTGCCATTTGTTTATACAAGACTCAGAATCTATaGAAACACCACTGGCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YQFVMSLSHLLCFAICLYKTQNL*KHHWLC Trigger: ACAAAGCCAGTGGTGTTTGCATAGATTCTGAGTCTT...GTATAAACAAATGGCAAAACACAAGAGATGGGACAAACTCATGACAAACTGGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| CDS GCA 90 bp | CCTCAGGGTGCGACCTTGCTCCTCGTCACTCTCGATGACAGCACGTaGCCACTCGTGTGCCTTGTACAGCTCATGTCGGCGGTCTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: PQGATLLLVTLDDST*PLVCLVQLMSAVWL Trigger: AAGCCAGACCGCCGACATGAGCTGTACAAGGCACACGAGTGGGCACGTGCTGTCATCGAGAGTGACGAGGAGCAAGGTCGCACCCTGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019268.11 ENSMUST00000203800.2 |
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| CDS GCA 90 bp | ACCTTGCTCCTCGTCACTCTCGATGACAGCACGTGCCCACTCGTGTaGCTTGTACAGCTCATGTCGGCGGTCTGGCTTCTCCTGGAACCG | + |
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Preference number: 5 (lower is better) Translates to: TLLLVTLDDSTCPLV*LVQLMSAVWLLLEP Trigger: CGGTTCCAGGAGAAGCCAGACCGCCGACATGAGCTGTACAAGGCACACGAGTGGGCACGTGCTGTCATCGAGAGTGACGAGGAGCAAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019268.11 ENSMUST00000203800.2 |
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| CDS CCA 90 bp | AGCACGTGCCCACTCGTGTGCCTTGTACAGCTCATGTCGGCGGTCTaGCTTCTCCTGGAACCGAGGTTCCTTTTTGGCTGGGTCATCGTC | + |
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Preference number: 5 (lower is better) Translates to: STCPLVCLVQLMSAV*LLLEPRFLFGWVIV Trigger: GACGATGACCCAGCCAAAAAGGAACCTCGGTTCCAGGAGAAGCCAGACCGCCGACATGAGCTGTACAAGGCACACGAGTGGGCACGTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019268.11 ENSMUST00000203800.2 |
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| CDS-3UTR CAA 90 bp | GAGAGCCAGGATGCTCGAGCAATGCCTGCCACACCTCTCCCACCATGGTGTGCTAACCGAGGTTCCTTTTaGGCTGGGTCATCGTCACCA | + |
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Preference number: 5 (lower is better) Translates to: ESQDARAMPATPLPPWCANRGSF*AGSSSP Trigger: TGGTGACGATGACCCAGCCAAAAAGGAACCTCGGTT...AGCACACCATGGTGGGAGAGGTGTGGCAGGCATTGCTCGAGCATCCTGGCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| CDS-3UTR CAA 90 bp | GCATTTGTCTGTCTAGTACAGGTGGTGCCCTATCCCACCCTGTGGTGTCCACTGCATGGCCTCCAGGCCTaGCTTCTCCAACTCCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: AFVCLVQVVPYPTLWCPLHGLQA*LLQLQH Trigger: ATGCTGGAGTTGGAGAAGCAAGGCCTGGAGGCCATG...CAGTGGACACCACAGGGTGGGATAGGGCACCACCTGTACTAGACAGACAAATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205108.2 |
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| CDS CCA 90 bp | CACTCGTGTGCCTTGTACAGCTCATGTCGGCGGTCTGGCTTCTCCTaGAACCGAGGTTCCTTTTTGGCTGGGTCATCGTCACCAAAACAG | + |
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Preference number: 5 (lower is better) Translates to: HSCALYSSCRRSGFS*NRGSFLAGSSSPKQ Trigger: CTGTTTTGGTGACGATGACCCAGCCAAAAAGGAACCTCGGTTCCAGGAGAAGCCAGACCGCCGACATGAGCTGTACAAGGCACACGAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019268.11 ENSMUST00000203800.2 |
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| CDS TCA 90 bp | GGACCTGGAAGGATCTGGGGTCCCGGTGAAGTAGTGGATACACGGTaGACTTCTGTTCTGAGGCAAGACAGACACTATACTGGCTGTGGT | + |
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Preference number: 5 (lower is better) Translates to: GPGRIWGPGEVVDTR*TSVLRQDRHYTGCG Trigger: ACCACAGCCAGTATAGTGTCTGTCTTGCCTCAGAACAGAAGTTCACCGTGTATCCACTACTTCACCGGGACCCCAGATCCTTCCAGGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019268.11 ENSMUST00000203800.2 |
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| CDS CCA 90 bp | CTGAGTTCTGGGTGCTCTTCATCCAGCTTAGTCGCGAGGGAAAGATaGTTGCAAATGCACCTCACTCCCTCTGTGATTCTCTCAGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: LSSGCSSSSLVARER*LQMHLTPSVILSAA Trigger: GGCTGCTGAGAGAATCACAGAGGGAGTGAGGTGCATTTGCAACCATCTTTCCCTCGCGACTAAGCTGGATGAAGAGCACCCAGAACTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| CDS-3UTR CAA 90 bp | TGCTCTCAGCAGTCAAGAGCGACCCTTTCCTTTCCCTCTTTGGCTGAGATTTGCTCCCGTCCACCAGCCTaGACTCTGAGCATAAGTCCT | + |
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Preference number: 5 (lower is better) Translates to: CSQQSRATLSFPSLAEICSRPPA*TLSISP Trigger: AGGACTTATGCTCAGAGTCAAGGCTGGTGGACGGGA...GCAAATCTCAGCCAAAGAGGGAAAGGAAAGGGTCGCTCTTGACTGCTGAGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| CDS TCA 90 bp | AGCTGGGAAATACACAACCTCCTGGACTTCATCTCTGGGCCGAGCTaGATTTTTCCCAAATACCACCAGACCGTCCTTAGCTCGAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: SWEIHNLLDFISGPS*IFPKYHQTVLSSRW Trigger: CCACCTCGAGCTAAGGACGGTCTGGTGGTATTTGGGAAAAATTCAGCTCGGCCCAGAGATGAAGTCCAGGAGGTTGTGTATTTCCCAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019268.11 ENSMUST00000129744.2 |
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| CDS-3UTR CAA 90 bp | CAGATTCCAGGTACATTAGCTATGCTCTCAGCAGTCAAGAGCGACCCTTTCCTTCATGGCCTCCAGGCCTaGCTTCTCCAACTCCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: QIPGTLAMLSAVKSDPFLHGLQA*LLQLQH Trigger: ATGCTGGAGTTGGAGAAGCAAGGCCTGGAGGCCATG...AAGGAAAGGGTCGCTCTTGACTGCTGAGAGCATAGCTAATGTACCTGGAATCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| CDS-3UTR CAA 90 bp | GCATACACCAGAGCAGAGCTGGGACTGTACCAGTCCTCTGTTCCTTCCCAGGACACAAAGATGAAAGGCTaGAATATGGACCTGGAAGGA | + |
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Preference number: 5 (lower is better) Translates to: AYTRAELGLYQSSVPSQDTKMKG*NMDLEG Trigger: TCCTTCCAGGTCCATATTCAAGCCTTTCATCTTTGT...GTCCTGGGAAGGAACAGAGGACTGGTACAGTCCCAGCTCTGCTCTGGTGTATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| CDS CCA 90 bp | TTGCTCTCAGCGTCATGGTCAACAGCTGGGAAATACACAACCTCCTaGACTTCATCTCTGGGCCGAGCTGAATTTTTCCCAAATACCACC | + |
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Preference number: 5 (lower is better) Translates to: LLSASWSTAGKYTTS*TSSLGRAEFFPNTT Trigger: GGTGGTATTTGGGAAAAATTCAGCTCGGCCCAGAGATGAAGTCCAGGAGGTTGTGTATTTCCCAGCTGTTGACCATGACGCTGAGAGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019268.11 ENSMUST00000129744.2 |
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| CDS GCA 90 bp | TACAGTCTCCAGCACCCAGGCTTCATCTCGGTCCACCAGCAGATATaGACTTTGGAAGCTATGGCAGGAGTGGGCATCTTCATAATAATT | + |
|
Preference number: 5 (lower is better) Translates to: YSLQHPGFISVHQQI*TLEAMAGVGIFIII Trigger: AATTATTATGAAGATGCCCACTCCTGCCATAGCTTCCAAAGTGCATATCTGCTGGTGGACCGAGATGAAGCCTGGGTGCTGGAGACTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| CDS-3UTR CAA 90 bp | AAATTAGTTGTGATACAAGAACTCAAGTCAGTAATTTCAAGACACGCACACCTGGCCCACTCGTGTGCCTaGTACAGCTCATGTCGGCGG | + |
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Preference number: 5 (lower is better) Translates to: KLVVIQELKSVISRHAHLAHSCA*YSSCRR Trigger: CCGCCGACATGAGCTGTACAAGGCACACGAGTGGGC...CAGGTGTGCGTGTCTTGAAATTACTGACTTGAGTTCTTGTATCACAACTAATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| CDS-3UTR CAA 90 bp | CTGTCCATCAGCAAGAGATACCAGTTTGTCATGAGTTTGTCCCATCTCTTGTGTCAGCAGATATGCACTTaGGAAGCTATGGCAGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSISKRYQFVMSLSHLLCQQICT*EAMAGV Trigger: CACTCCTGCCATAGCTTCCAAAGTGCATATCTGCTG...ACACAAGAGATGGGACAAACTCATGACAAACTGGTATCTCTTGCTGATGGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| CDS-3UTR CAA 90 bp | AACTCTCGGTTTACTCACACAGAAGAGTGTTTATCTGCTGGTAATTTAGTCGGGGCATTGATGGCTTCGTaGGCTATGCATACCCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: NSRFTHTEECLSAGNLVGALMAS*AMHTPC Trigger: ACATGGGGTATGCATAGCCAACGAAGCCATCAATGC...CCCGACTAAATTACCAGCAGATAAACACTCTTCTGTGTGAGTAAACCGAGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| CDS-3UTR CAA 90 bp | CTCCTAAGTCTGCTTACTCAAAATCCAGTATTATTTCTGCTGTTAGTTTGGCTAGCGAGGGAAAGATGGTaGCAAATGCACCTCACTCCC | + |
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Preference number: 5 (lower is better) Translates to: LLSLLTQNPVLFLLLVWLARERW*QMHLTP Trigger: GGGAGTGAGGTGCATTTGCAACCATCTTTCCCTCGC...TAGCCAAACTAACAGCAGAAATAATACTGGATTTTGAGTAAGCAGACTTAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| CDS-3UTR CAA 90 bp | TACCAGTTTGTCATGAGTTTGTCCCATCTCTTGTGTTTTGCCATTTGTTTATACTGGGGACTTGGTCGATaGAGATGTAAGTGCACTCAA | + |
|
Preference number: 5 (lower is better) Translates to: YQFVMSLSHLLCFAICLYWGLGR*RCKCTQ Trigger: TTGAGTGCACTTACATCTCAATCGACCAAGTCCCCA...GTATAAACAAATGGCAAAACACAAGAGATGGGACAAACTCATGACAAACTGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| CDS-3UTR CAA 90 bp | TACCAGTTTGTCATGAGTTTGTCCCATCTCTTGTGTTTTGCCATTTGTTTATACCAAACACCACTGGCTTaGTCTCGTAAGATGTTAATC | + |
|
Preference number: 5 (lower is better) Translates to: YQFVMSLSHLLCFAICLYQTPLA*SRKMLI Trigger: GATTAACATCTTACGAGACAAAGCCAGTGGTGTTTG...GTATAAACAAATGGCAAAACACAAGAGATGGGACAAACTCATGACAAACTGGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| CDS GCA 72 bp | GCGACCTTGCTCCTCGTCACTCTCGATGACAGCACGTaGCCACTCGTGTGCCTTGTACAGCTCATGTCGGCG | + |
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Preference number: 6 (lower is better) Translates to: ATLLLVTLDDST*PLVCLVQLMSA Trigger: CGCCGACATGAGCTGTACAAGGCACACGAGTGGGCACGTGCTGTCATCGAGAGTGACGAGGAGCAAGGTCGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019268.11 ENSMUST00000203800.2 |
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| CDS CAA 90 bp | TGCTCCTCGTCACTCTCGATGACAGCACGTGCCCACTCGTGTGCCTaGTACAGCTCATGTCGGCGGTCTGGCTTCTCCTGGAACCGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: CSSSLSMTARAHSCA*YSSCRRSGFSWNRG Trigger: ACCTCGGTTCCAGGAGAAGCCAGACCGCCGACATGAGCTGTACAAGGCACACGAGTGGGCACGTGCTGTCATCGAGAGTGACGAGGAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019268.11 ENSMUST00000203800.2 |
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| CDS TCA 72 bp | TCCTCAGGGTGCGACCTTGCTCCTCGTCACTCTCGATaGCAGCACGTGCCCACTCGTGTGCCTTGTACAGCT | + |
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Preference number: 6 (lower is better) Translates to: SSGCDLAPRHSR*QHVPTRVPCTA Trigger: AGCTGTACAAGGCACACGAGTGGGCACGTGCTGTCATCGAGAGTGACGAGGAGCAAGGTCGCACCCTGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019268.11 ENSMUST00000203800.2 |
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| CDS GCA 72 bp | CTCGTCACTCTCGATGACAGCACGTGCCCACTCGTGTaGCTTGTACAGCTCATGTCGGCGGTCTGGCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LVTLDDSTCPLV*LVQLMSAVWLL Trigger: GAGAAGCCAGACCGCCGACATGAGCTGTACAAGGCACACGAGTGGGCACGTGCTGTCATCGAGAGTGACGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019268.11 ENSMUST00000203800.2 |
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| CDS CAA 72 bp | TCACTCTCGATGACAGCACGTGCCCACTCGTGTGCCTaGTACAGCTCATGTCGGCGGTCTGGCTTCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SLSMTARAHSCA*YSSCRRSGFSW Trigger: CCAGGAGAAGCCAGACCGCCGACATGAGCTGTACAAGGCACACGAGTGGGCACGTGCTGTCATCGAGAGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019268.11 ENSMUST00000203800.2 |
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| CDS CAA 72 bp | GGGGCTGCTCAGAATCTCGTCCATGGCCTCCAGGCCTaGCTTCTCCAACTCCAGCATGGTCTTCCTCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: GAAQNLVHGLQA*LLQLQHGLPQG Trigger: ACCCTGAGGAAGACCATGCTGGAGTTGGAGAAGCAAGGCCTGGAGGCCATGGACGAGATTCTGAGCAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019268.11 ENSMUST00000203800.2 ENSMUST00000205108.2 |
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| CDS CCA 72 bp | CCACTCGTGTGCCTTGTACAGCTCATGTCGGCGGTCTaGCTTCTCCTGGAACCGAGGTTCCTTTTTGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PLVCLVQLMSAV*LLLEPRFLFGW Trigger: CCAGCCAAAAAGGAACCTCGGTTCCAGGAGAAGCCAGACCGCCGACATGAGCTGTACAAGGCACACGAGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019268.11 ENSMUST00000203800.2 |
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| CDS CAA 90 bp | AGCTCATGTCGGCGGTCTGGCTTCTCCTGGAACCGAGGTTCCTTTTaGGCTGGGTCATCGTCACCAAAACAGGGTGACTGTGCTTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSCRRSGFSWNRGSF*AGSSSPKQGDCALG Trigger: CCCCAAAGCACAGTCACCCTGTTTTGGTGACGATGACCCAGCCAAAAAGGAACCTCGGTTCCAGGAGAAGCCAGACCGCCGACATGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019268.11 ENSMUST00000203800.2 |
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| CDS CCA 72 bp | GGCGGTCTGGCTTCTCCTGGAACCGAGGTTCCTTTTTaGCTGGGTCATCGTCACCAAAACAGGGTGACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GGLASPGTEVPF*LGHRHQNRVTV Trigger: CACAGTCACCCTGTTTTGGTGACGATGACCCAGCCAAAAAGGAACCTCGGTTCCAGGAGAAGCCAGACCGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019268.11 ENSMUST00000203800.2 |
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| CDS CCA 72 bp | GCCTTGTACAGCTCATGTCGGCGGTCTGGCTTCTCCTaGAACCGAGGTTCCTTTTTGGCTGGGTCATCGTCA | + |
|
Preference number: 6 (lower is better) Translates to: ALYSSCRRSGFS*NRGSFLAGSSS Trigger: TGACGATGACCCAGCCAAAAAGGAACCTCGGTTCCAGGAGAAGCCAGACCGCCGACATGAGCTGTACAAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019268.11 ENSMUST00000203800.2 |
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| CDS GCA 72 bp | CAGCACCCAGGCTTCATCTCGGTCCACCAGCAGATATaGACTTTGGAAGCTATGGCAGGAGTGGGCATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: QHPGFISVHQQI*TLEAMAGVGIF Trigger: GAAGATGCCCACTCCTGCCATAGCTTCCAAAGTGCATATCTGCTGGTGGACCGAGATGAAGCCTGGGTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| CDS CCA 72 bp | TTTCCCAAATACCACCAGACCGTCCTTAGCTCGAGGTaGCAGAGCCACAAAAGAGTAACTTGGAGGCGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: FPKYHQTVLSSR*QSHKRVTWRRA Trigger: GGCGCGCCTCCAAGTTACTCTTTTGTGGCTCTGCCACCTCGAGCTAAGGACGGTCTGGTGGTATTTGGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019268.11 ENSMUST00000129744.2 |
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| CDS CCA 72 bp | GCCAGGCAGGTCTGCTTATCACGATGGCGTGGGTCCTaGGGACTTGGTCGATTGAGATGTAAGTGCACTCAA | + |
|
Preference number: 6 (lower is better) Translates to: ARQVCLSRWRGS*GLGRLRCKCTQ Trigger: TTGAGTGCACTTACATCTCAATCGACCAAGTCCCCAGGACCCACGCCATCGTGATAAGCAGACCTGCCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019268.11 ENSMUST00000129744.2 |
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| CDS CAA 90 bp | CAGGTCTGCTTATCACGATGGCGTGGGTCCTGGGGACTTGGTCGATaGAGATGTAAGTGCACTCAACTTTGCTCTCAGCGTCATGGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: QVCLSRWRGSWGLGR*RCKCTQLCSQRHGQ Trigger: TTGACCATGACGCTGAGAGCAAAGTTGAGTGCACTTACATCTCAATCGACCAAGTCCCCAGGACCCACGCCATCGTGATAAGCAGACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019268.11 ENSMUST00000129744.2 |
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| CDS CAA 90 bp | CTCCAGCACCCAGGCTTCATCTCGGTCCACCAGCAGATATGCACTTaGGAAGCTATGGCAGGAGTGGGCATCTTCATAATAATTTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: LQHPGFISVHQQICT*EAMAGVGIFIIIST Trigger: GGTGGAAATTATTATGAAGATGCCCACTCCTGCCATAGCTTCCAAAGTGCATATCTGCTGGTGGACCGAGATGAAGCCTGGGTGCTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| CDS CCA 72 bp | GCGTCATGGTCAACAGCTGGGAAATACACAACCTCCTaGACTTCATCTCTGGGCCGAGCTGAATTTTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: ASWSTAGKYTTS*TSSLGRAEFFP Trigger: TGGGAAAAATTCAGCTCGGCCCAGAGATGAAGTCCAGGAGGTTGTGTATTTCCCAGCTGTTGACCATGACGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019268.11 ENSMUST00000129744.2 |
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| CDS CCA 72 bp | GCACTCAACTTTGCTCTCAGCGTCATGGTCAACAGCTaGGAAATACACAACCTCCTGGACTTCATCTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: ALNFALSVMVNS*EIHNLLDFISG Trigger: CCCAGAGATGAAGTCCAGGAGGTTGTGTATTTCCCAGCTGTTGACCATGACGCTGAGAGCAAAGTTGAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019268.11 ENSMUST00000129744.2 |
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| CDS CAA 72 bp | TTATCACGATGGCGTGGGTCCTGGGGACTTGGTCGATaGAGATGTAAGTGCACTCAACTTTGCTCTCAGCGT | + |
|
Preference number: 6 (lower is better) Translates to: LSRWRGSWGLGR*RCKCTQLCSQR Trigger: ACGCTGAGAGCAAAGTTGAGTGCACTTACATCTCAATCGACCAAGTCCCCAGGACCCACGCCATCGTGATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019268.11 ENSMUST00000129744.2 |
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| CDS TCA 72 bp | ATACACAACCTCCTGGACTTCATCTCTGGGCCGAGCTaGATTTTTCCCAAATACCACCAGACCGTCCTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: IHNLLDFISGPS*IFPKYHQTVLS Trigger: GCTAAGGACGGTCTGGTGGTATTTGGGAAAAATTCAGCTCGGCCCAGAGATGAAGTCCAGGAGGTTGTGTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019268.11 ENSMUST00000129744.2 |
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| CDS CCA 72 bp | CAGCTGGGAAATACACAACCTCCTGGACTTCATCTCTaGGCCGAGCTGAATTTTTCCCAAATACCACCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: QLGNTQPPGLHL*AELNFSQIPPD Trigger: GTCTGGTGGTATTTGGGAAAAATTCAGCTCGGCCCAGAGATGAAGTCCAGGAGGTTGTGTATTTCCCAGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019268.11 ENSMUST00000129744.2 |
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| CDS CAA 72 bp | CCAGGCTTCATCTCGGTCCACCAGCAGATATGCACTTaGGAAGCTATGGCAGGAGTGGGCATCTTCATAATA | + |
|
Preference number: 6 (lower is better) Translates to: PGFISVHQQICT*EAMAGVGIFII Trigger: TATTATGAAGATGCCCACTCCTGCCATAGCTTCCAAAGTGCATATCTGCTGGTGGACCGAGATGAAGCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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| CDS GCA 72 bp | GGACTTGGTCGATTGAGATGTAAGTGCACTCAACTTTaGTCTCAGCGTCATGGTCAACAGCTGGGAAATACA | + |
|
Preference number: 6 (lower is better) Translates to: GLGRLRCKCTQL*SQRHGQQLGNT Trigger: TGTATTTCCCAGCTGTTGACCATGACGCTGAGAGCAAAGTTGAGTGCACTTACATCTCAATCGACCAAGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019268.11 ENSMUST00000129744.2 |
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| CDS CAA 72 bp | AGGAAAGACTCAGAATCTATGCAAACACCACTGGCTTaGTCTCGTAAGATGTTAATCATCGTCTGCACAGTG | + |
|
Preference number: 6 (lower is better) Translates to: RKDSESMQTPLA*SRKMLIIVCTV Trigger: CACTGTGCAGACGATGATTAACATCTTACGAGACAAAGCCAGTGGTGTTTGCATAGATTCTGAGTCTTTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019268.11 |
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