Pregenerated sensors for SCPEP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000278Ensembl transcript IDs: ENSMUST00000000287.9
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGCATAGGCTGCTTTTGAACTTTCGATGTAGCTGCGGATGCGTTTaGACCTCTCATCCATCCTCTTGCTTCTTCTACCTCTCAAGTGCT | + |
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Preference number: 1 (lower is better) Translates to: WHRLLLNFRCSCGCV*TSHPSSCFFYLSSA Trigger: AGCACTTGAGAGGTAGAAGAAGCAAGAGGATGGATGAGAGGTTCAAACGCATCCGCAGCTACATCGAAAGTTCAAAAGCAGCCTATGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| 3UTR GCA 90 bp | CGTTTGAACCTCTCATCCATCCTCTTGCTTCTTCTACCTCTCAAGTaGTTGGATTTACATGTGCTATCAACTGCTTTTGTAGTAAGAGAC | + |
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Preference number: 1 (lower is better) Translates to: RLNLSSILLLLLPLK*LDLHVLSTAFVVRD Trigger: GTCTCTTACTACAAAAGCAGTTGATAGCACATGTAAATCCAAGCACTTGAGAGGTAGAAGAAGCAAGAGGATGGATGAGAGGTTCAAACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| 3UTR CCA 90 bp | ACAACACATTTATTGATGGGAAAAGAAGTGCGGGTCATGTCGACATaGGAACGAAGCAGACAGCAAAATAGCGTACAATATGGATTTCAT | + |
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Preference number: 1 (lower is better) Translates to: TTHLLMGKEVRVMST*ERSRQQNSVQYGFH Trigger: ATGAAATCCATATTGTACGCTATTTTGCTGTCTGCTTCGTTCCCATGTCGACATGACCCGCACTTCTTTTCCCATCAATAAATGTGTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| 3UTR TCA 90 bp | AACTGCTTTTGTAGTAAGAGACCAATCGATTGCAACCCTTCACTTTaGTTAAATGAGTCTGGTTTTAAATACTCTTTGGGAAGCAGAACT | + |
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Preference number: 1 (lower is better) Translates to: NCFCSKRPIDCNPSL*LNESGFKYSLGSRT Trigger: AGTTCTGCTTCCCAAAGAGTATTTAAAACCAGACTCATTTAATCAAAGTGAAGGGTTGCAATCGATTGGTCTCTTACTACAAAAGCAGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| 3UTR-3UTR CCA 90 bp | AAGAAGTGCGGGTCATGTCGACATGGGAACGAAGCAGACAGCAAAATAGCGTACTTAGCACCTGCATCCTaGGCTCTGCTCTTAGCGCCT | + |
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Preference number: 2 (lower is better) Translates to: KKCGSCRHGNEADSKIAYLAPAS*ALLLAP Trigger: AGGCGCTAAGAGCAGAGCCCAGGATGCAGGTGCTAA...GTACGCTATTTTGCTGTCTGCTTCGTTCCCATGTCGACATGACCCGCACTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| 3UTR-3UTR CCA 90 bp | TGGGAAAAGAAGTGCGGGTCATGTCGACATGGGAACGAAGCAGACAGCAAAATAGGGACTCTCCCTGTTTaGCATAGGCTGCTTTTGAAC | + |
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Preference number: 2 (lower is better) Translates to: WEKKCGSCRHGNEADSKIGTLPV*HRLLLN Trigger: GTTCAAAAGCAGCCTATGCCAAACAGGGAGAGTCCC...TATTTTGCTGTCTGCTTCGTTCCCATGTCGACATGACCCGCACTTCTTTTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| 3UTR-3UTR GCA 90 bp | ATCCTCTTGCTTCTTCTACCTCTCAAGTGCTTGGATTTACATGTGCTATCAACTACGGGAGAGAGCAGGTaGTCCCAGAGTCATATCCCA | + |
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Preference number: 2 (lower is better) Translates to: ILLLLLPLKCLDLHVLSTTGESR*SQSHIP Trigger: TGGGATATGACTCTGGGAGCACCTGCTCTCTCCCGT...AGTTGATAGCACATGTAAATCCAAGCACTTGAGAGGTAGAAGAAGCAAGAGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| 3UTR-3UTR CCA 90 bp | AAGAAGTGCGGGTCATGTCGACATGGGAACGAAGCAGACAGCAAAATAGCGTACTACCTCTCAAGTGCTTaGATTTACATGTGCTATCAA | + |
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Preference number: 2 (lower is better) Translates to: KKCGSCRHGNEADSKIAYYLSSA*IYMCYQ Trigger: TTGATAGCACATGTAAATCCAAGCACTTGAGAGGTA...GTACGCTATTTTGCTGTCTGCTTCGTTCCCATGTCGACATGACCCGCACTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| 3UTR CAA 90 bp | TTGAACCTCTCATCCATCCTCTTGCTTCTTCTACCTCTCAAGTGCTaGGATTTACATGTGCTATCAACTGCTTTTGTAGTAAGAGACCAA | + |
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Preference number: 2 (lower is better) Translates to: LNLSSILLLLLPLKC*DLHVLSTAFVVRDQ Trigger: TTGGTCTCTTACTACAAAAGCAGTTGATAGCACATGTAAATCCAAGCACTTGAGAGGTAGAAGAAGCAAGAGGATGGATGAGAGGTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| 3UTR GCA 72 bp | CAGGGGAGAAGAGCACCAGGGATAGACATTAGCACCTaGATCCTGGGCTCTGCTCTTAGCGCCTCCAGGGCC | + |
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Preference number: 3 (lower is better) Translates to: QGRRAPGIDIST*ILGSALSASRA Trigger: GGCCCTGGAGGCGCTAAGAGCAGAGCCCAGGATGCAGGTGCTAATGTCTATCCCTGGTGCTCTTCTCCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| 3UTR GCA 72 bp | AGAAGGCCACAGTCTTTCGGTACGGGAGAGAGCAGGTaGTCCCAGAGTCATATCCCATGGCAGAGCAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: RRPQSFGTGESR*SQSHIPWQSRG Trigger: TCCCCTGCTCTGCCATGGGATATGACTCTGGGAGCACCTGCTCTCTCCCGTACCGAAAGACTGTGGCCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| 3UTR TCA 72 bp | GGACAGGGACTCTCCCTGTTTGGCATAGGCTGCTTTTaGACTTTCGATGTAGCTGCGGATGCGTTTGAACCT | + |
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Preference number: 3 (lower is better) Translates to: GQGLSLFGIGCF*TFDVAADAFEP Trigger: AGGTTCAAACGCATCCGCAGCTACATCGAAAGTTCAAAAGCAGCCTATGCCAAACAGGGAGAGTCCCTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| 3UTR-3UTR CAA 90 bp | TTGTCTCTCCCACTGCTTTTGTCTATAAATCATGTGGTTTGCTTTTGCTCTTTTGGTTTTAAATACTCTTaGGGAAGCAGAACTGATTTC | + |
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Preference number: 3 (lower is better) Translates to: LSLPLLLSINHVVCFCSFGFKYS*GSRTDF Trigger: GAAATCAGTTCTGCTTCCCAAAGAGTATTTAAAACC...AAAAGAGCAAAAGCAAACCACATGATTTATAGACAAAAGCAGTGGGAGAGACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| 3UTR TCA 72 bp | TGTAGTAAGAGACCAATCGATTGCAACCCTTCACTTTaGTTAAATGAGTCTGGTTTTAAATACTCTTTGGGA | + |
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Preference number: 3 (lower is better) Translates to: CSKRPIDCNPSL*LNESGFKYSLG Trigger: TCCCAAAGAGTATTTAAAACCAGACTCATTTAATCAAAGTGAAGGGTTGCAATCGATTGGTCTCTTACTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS-3UTR TCA 90 bp | CAGGTGCTCCCAGAGTCATATCCCATGGCAGAGCAGGGGAGAAGAGCACCAGGGTGTACACGGTCACATTaGCCCCAGCTGCCAGCAACT | + |
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Preference number: 4 (lower is better) Translates to: QVLPESYPMAEQGRRAPGCTRSH*PQLPAT Trigger: AGTTGCTGGCAGCTGGGGTCAATGTGACCGTGTACA...CCCTGGTGCTCTTCTCCCCTGCTCTGCCATGGGATATGACTCTGGGAGCACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS-3UTR CCA 90 bp | CAGGTGCTCCCAGAGTCATATCCCATGGCAGAGCAGGGGAGAAGAGCACCAGGGGAATTTGGACAGCTGTaGCCACTTGAGCTTCTGAAC | + |
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Preference number: 4 (lower is better) Translates to: QVLPESYPMAEQGRRAPGEFGQL*PLELLN Trigger: GTTCAGAAGCTCAAGTGGCCACAGCTGTCCAAATTC...CCCTGGTGCTCTTCTCCCCTGCTCTGCCATGGGATATGACTCTGGGAGCACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS-3UTR TCA 90 bp | AAGAAGTGCGGGTCATGTCGACATGGGAACGAAGCAGACAGCAAAATAGCGTACCACCCTGAAGCCACATaGCCAGGGGCAGCTCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: KKCGSCRHGNEADSKIAYHPEAT*PGAALK Trigger: TTTCAGAGCTGCCCCTGGTCATGTGGCTTCAGGGTG...GTACGCTATTTTGCTGTCTGCTTCGTTCCCATGTCGACATGACCCGCACTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS-3UTR GCA 90 bp | TTGATGGGAAAAGAAGTGCGGGTCATGTCGACATGGGAACGAAGCAGACAGCAACTTAAGGCGTCTCCTTaGAGGTGTCTCACATGGCGC | + |
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Preference number: 4 (lower is better) Translates to: LMGKEVRVMSTWERSRQQLKASP*RCLTWR Trigger: GCGCCATGTGAGACACCTGCAAGGAGACGCCTTAAG...TTGCTGTCTGCTTCGTTCCCATGTCGACATGACCCGCACTTCTTTTCCCATCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS-3UTR TCA 90 bp | ATTGATGGGAAAAGAAGTGCGGGTCATGTCGACATGGGAACGAAGCAGACAGCAGACCAGGGGCAGCTCTaGAAAGTTCTTGCAAGGGTT | + |
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Preference number: 4 (lower is better) Translates to: IDGKRSAGHVDMGTKQTADQGQL*KVLARV Trigger: AACCCTTGCAAGAACTTTTCAGAGCTGCCCCTGGTC...TGCTGTCTGCTTCGTTCCCATGTCGACATGACCCGCACTTCTTTTCCCATCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS-3UTR TCA 90 bp | AGAGCACCAGGGATAGACATTAGCACCTGCATCCTGGGCTCTGCTCTTAGCGCCTCCTCCGTAGGATTCTaGGAAAATGTAGAATGGAAC | + |
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Preference number: 4 (lower is better) Translates to: RAPGIDISTCILGSALSASSVGF*ENVEWN Trigger: GTTCCATTCTACATTTTCTCAGAATCCTACGGAGGA...GGCGCTAAGAGCAGAGCCCAGGATGCAGGTGCTAATGTCTATCCCTGGTGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS-3UTR GCA 90 bp | AGAGCACCAGGGATAGACATTAGCACCTGCATCCTGGGCTCTGCTCTTAGCGCCTTCAATGATCATTTCTaGTTTCCCCCACAGCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: RAPGIDISTCILGSALSAFNDHF*FPPQLS Trigger: ACTCAGCTGTGGGGGAAAGCAGAAATGATCATTGAA...GGCGCTAAGAGCAGAGCCCAGGATGCAGGTGCTAATGTCTATCCCTGGTGCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS-3UTR CCA 90 bp | AAGAAGTGCGGGTCATGTCGACATGGGAACGAAGCAGACAGCAAAATAGCGTACAGCCACCAGAACATGTaGGCATCCTTTCGGACAGTC | + |
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Preference number: 4 (lower is better) Translates to: KKCGSCRHGNEADSKIAYSHQNM*ASFRTV Trigger: GACTGTCCGAAAGGATGCCCACATGTTCTGGTGGCT...GTACGCTATTTTGCTGTCTGCTTCGTTCCCATGTCGACATGACCCGCACTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS-3UTR TCA 90 bp | CATCCTCTTGCTTCTTCTACCTCTCAAGTGCTTGGATTTACATGTGCTATCAACTCCCCAGGACAGCACTaGATCCACGGGGGAGATCCA | + |
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Preference number: 4 (lower is better) Translates to: HPLASSTSQVLGFTCAINSPGQH*IHGGDP Trigger: TGGATCTCCCCCGTGGATTCAGTGCTGTCCTGGGGA...GTTGATAGCACATGTAAATCCAAGCACTTGAGAGGTAGAAGAAGCAAGAGGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS-3UTR TCA 90 bp | ATGGGAAAAGAAGTGCGGGTCATGTCGACATGGGAACGAAGCAGACAGCAAAATCGATGGCAGGCTTCATaGAGTCCCCTTCCATGCTTA | + |
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Preference number: 4 (lower is better) Translates to: MGKEVRVMSTWERSRQQNRWQAS*SPLPCL Trigger: TAAGCATGGAAGGGGACTTCATGAAGCCTGCCATCG...ATTTTGCTGTCTGCTTCGTTCCCATGTCGACATGACCCGCACTTCTTTTCCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS-3UTR CCA 90 bp | ATGGGAAAAGAAGTGCGGGTCATGTCGACATGGGAACGAAGCAGACAGCAAAATTCTTGCAAGGGTTGGTaGCATAATAGAGCCACCAGA | + |
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Preference number: 4 (lower is better) Translates to: MGKEVRVMSTWERSRQQNSCKGW*HNRATR Trigger: TCTGGTGGCTCTATTATGCCACCAACCCTTGCAAGA...ATTTTGCTGTCTGCTTCGTTCCCATGTCGACATGACCCGCACTTCTTTTCCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS-3UTR TCA 90 bp | AAGAAGTGCGGGTCATGTCGACATGGGAACGAAGCAGACAGCAAAATAGCGTACGCCTTCCATTTTAGCTaGTTGAATTTGGACAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: KKCGSCRHGNEADSKIAYAFHFS*LNLDSC Trigger: ACAGCTGTCCAAATTCAATCAGCTAAAATGGAAGGC...GTACGCTATTTTGCTGTCTGCTTCGTTCCCATGTCGACATGACCCGCACTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS-3UTR GCA 90 bp | CATCCTCTTGCTTCTTCTACCTCTCAAGTGCTTGGATTTACATGTGCTATCAACAGGAGACTGGCCCACTaGAGCCAGGTAGTATTTCGA | + |
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Preference number: 4 (lower is better) Translates to: HPLASSTSQVLGFTCAINRRLAH*SQVVFR Trigger: TCGAAATACTACCTGGCTGCAGTGGGCCAGTCTCCT...GTTGATAGCACATGTAAATCCAAGCACTTGAGAGGTAGAAGAAGCAAGAGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS-3UTR GCA 90 bp | ATGGGAAAAGAAGTGCGGGTCATGTCGACATGGGAACGAAGCAGACAGCAAAATGCTCTGAAAAGTTCTTaGAAGGGTTGGTGGCATAAT | + |
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Preference number: 4 (lower is better) Translates to: MGKEVRVMSTWERSRQQNALKSS*KGWWHN Trigger: ATTATGCCACCAACCCTTGCAAGAACTTTTCAGAGC...ATTTTGCTGTCTGCTTCGTTCCCATGTCGACATGACCCGCACTTCTTTTCCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS-3UTR CCA 90 bp | CATCCTCTTGCTTCTTCTACCTCTCAAGTGCTTGGATTTACATGTGCTATCAACAGTTCTTGCAAGGGTTaGTGGCATAATAGAGCCACC | + |
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Preference number: 4 (lower is better) Translates to: HPLASSTSQVLGFTCAINSSCKG*WHNRAT Trigger: GGTGGCTCTATTATGCCACCAACCCTTGCAAGAACT...GTTGATAGCACATGTAAATCCAAGCACTTGAGAGGTAGAAGAAGCAAGAGGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS-3UTR TCA 90 bp | CATCCTCTTGCTTCTTCTACCTCTCAAGTGCTTGGATTTACATGTGCTATCAACTGTAAAGTTCTACACTaGTGCCAGCAGCCATCTTTC | + |
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Preference number: 4 (lower is better) Translates to: HPLASSTSQVLGFTCAINCKVLH*CQQPSF Trigger: GAAAGATGGCTGCTGGCATCAGTGTAGAACTTTACA...GTTGATAGCACATGTAAATCCAAGCACTTGAGAGGTAGAAGAAGCAAGAGGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS-3UTR TCA 90 bp | ATCCTCTTGCTTCTTCTACCTCTCAAGTGCTTGGATTTACATGTGCTATCAACTGAACGCAGCTGTTTCTaGAGACTTAGGATCGGTGTA | + |
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Preference number: 4 (lower is better) Translates to: ILLLLLPLKCLDLHVLSTERSCF*RLRIGV Trigger: TACACCGATCCTAAGTCTTCAGAAACAGCTGCGTTC...AGTTGATAGCACATGTAAATCCAAGCACTTGAGAGGTAGAAGAAGCAAGAGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS-3UTR CCA 90 bp | AAGAAGTGCGGGTCATGTCGACATGGGAACGAAGCAGACAGCAAAATAGCGTACGTCTGGAATTCTTTATaGCAATCAAAGAAGGATTTC | + |
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Preference number: 4 (lower is better) Translates to: KKCGSCRHGNEADSKIAYVWNSL*QSKKDF Trigger: GAAATCCTTCTTTGATTGCCATAAAGAATTCCAGAC...GTACGCTATTTTGCTGTCTGCTTCGTTCCCATGTCGACATGACCCGCACTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS-3UTR TCA 90 bp | TTGTCTCTCCCACTGCTTTTGTCTATAAATCATGTGGTTTGCTTTTGCTCTTTTACCTCGGCCAAGCCTTaGTTATCAAGGAGAGACATA | + |
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Preference number: 4 (lower is better) Translates to: LSLPLLLSINHVVCFCSFTSAKP*LSRRDI Trigger: TATGTCTCTCCTTGATAATCAAGGCTTGGCCGAGGT...AAAAGAGCAAAAGCAAACCACATGATTTATAGACAAAAGCAGTGGGAGAGACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| 3UTR CAA 72 bp | TCATCCATCCTCTTGCTTCTTCTACCTCTCAAGTGCTaGGATTTACATGTGCTATCAACTGCTTTTGTAGTA | + |
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Preference number: 4 (lower is better) Translates to: SSILLLLLPLKC*DLHVLSTAFVV Trigger: TACTACAAAAGCAGTTGATAGCACATGTAAATCCAAGCACTTGAGAGGTAGAAGAAGCAAGAGGATGGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS GCA 90 bp | AAGCCCGTGCCCACGGGATTATCCACAAACAGGAGACTGGCCCACTaGAGCCAGGTAGTATTTCGAGGCTTGAGTTGGGTGTCAAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: KPVPTGLSTNRRLAH*SQVVFRGLSWVSRG Trigger: CCCTCTTGACACCCAACTCAAGCCTCGAAATACTACCTGGCTGCAGTGGGCCAGTCTCCTGTTTGTGGATAATCCCGTGGGCACGGGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS TCA 90 bp | AGAACCACCCGGACCACCCTGAAGCCACATGACCAGGGGCAGCTCTaGAAAGTTCTTGCAAGGGTTGGTGGCATAATAGAGCCACCAGAA | + |
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Preference number: 5 (lower is better) Translates to: RTTRTTLKPHDQGQL*KVLARVGGIIEPPE Trigger: TTCTGGTGGCTCTATTATGCCACCAACCCTTGCAAGAACTTTTCAGAGCTGCCCCTGGTCATGTGGCTTCAGGGTGGTCCGGGTGGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS TCA 90 bp | CCCCAGCTGCCAGCAACTTATCCACAACGTCGATGGCAGGCTTCATaGAGTCCCCTTCCATGCTTAGGAAGACATAAGATGCCTGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: PQLPATYPQRRWQAS*SPLPCLGRHKMPGL Trigger: GAGCCCAGGCATCTTATGTCTTCCTAAGCATGGAAGGGGACTTCATGAAGCCTGCCATCGACGTTGTGGATAAGTTGCTGGCAGCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS GCA 90 bp | TTTCAGGAGAACCATCATGTCGGAAGCCACCGTGTCCAGGTCCTTTaGGTAGGCATCTGTTGTGTTGACATAGCTGAAGCCCGTGCCCAC | + |
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Preference number: 5 (lower is better) Translates to: FQENHHVGSHRVQVL*VGICCVDIAEARAH Trigger: GTGGGCACGGGCTTCAGCTATGTCAACACAACAGATGCCTACGCAAAGGACCTGGACACGGTGGCTTCCGACATGATGGTTCTCCTGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS GCA 90 bp | AATGAGATCCAGCTGTCCGTTGTACACGGTCACATTGACCCCAGCTaGCAGCAACTTATCCACAACGTCGATGGCAGGCTTCATGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: NEIQLSVVHGHIDPS*QQLIHNVDGRLHEV Trigger: GACTTCATGAAGCCTGCCATCGACGTTGTGGATAAGTTGCTGGCAGCTGGGGTCAATGTGACCGTGTACAACGGACAGCTGGATCTCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS GCA 90 bp | GGCCTCCTTGTAGAAGCCCTTGTTTACAGCATCAAGGACTTGCTCTaGAATGTCGGACACCTCGGCCAAGCCTTGATTATCAAGGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: GLLVEALVYSIKDLL*NVGHLGQALIIKER Trigger: TCTCTCCTTGATAATCAAGGCTTGGCCGAGGTGTCCGACATTGCAGAGCAAGTCCTTGATGCTGTAAACAAGGGCTTCTACAAGGAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS CCA 90 bp | AGGAGACTGGCCCACTGCAGCCAGGTAGTATTTCGAGGCTTGAGTTaGGTGTCAAGAGGGCCGATTTCTTCAAAGTTTCCAAATCCAGTG | + |
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Preference number: 5 (lower is better) Translates to: RRLAHCSQVVFRGLS*VSRGPISSKFPNPV Trigger: CACTGGATTTGGAAACTTTGAAGAAATCGGCCCTCTTGACACCCAACTCAAGCCTCGAAATACTACCTGGCTGCAGTGGGCCAGTCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS-3UTR CAA 90 bp | TGGGAAAAGAAGTGCGGGTCATGTCGACATGGGAACGAAGCAGACAGCAAAATACACCTCGGCCAAGCCTaGATTATCAAGGAGAGACAT | + |
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Preference number: 5 (lower is better) Translates to: WEKKCGSCRHGNEADSKIHLGQA*IIKERH Trigger: ATGTCTCTCCTTGATAATCAAGGCTTGGCCGAGGTG...TATTTTGCTGTCTGCTTCGTTCCCATGTCGACATGACCCGCACTTCTTTTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS-3UTR CAA 90 bp | AAGAAGTGCGGGTCATGTCGACATGGGAACGAAGCAGACAGCAAAATAGCGTACTCCTCAGGGATAATTTaGAGCTTCTTTTTGATGGGG | + |
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Preference number: 5 (lower is better) Translates to: KKCGSCRHGNEADSKIAYSSGII*SFFLMG Trigger: CCCCATCAAAAAGAAGCTCAAAATTATCCCTGAGGA...GTACGCTATTTTGCTGTCTGCTTCGTTCCCATGTCGACATGACCCGCACTTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS-3UTR CAA 90 bp | TTGTCTCTCCCACTGCTTTTGTCTATAAATCATGTGGTTTGCTTTTGCTCTTTTCAGGGCCATCTCCCCTaGGTCAGAAGGAACCATGTG | + |
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Preference number: 5 (lower is better) Translates to: LSLPLLLSINHVVCFCSFQGHLP*VRRNHV Trigger: CACATGGTTCCTTCTGACCAAGGGGAGATGGCCCTG...AAAAGAGCAAAAGCAAACCACATGATTTATAGACAAAAGCAGTGGGAGAGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS-3UTR CAA 90 bp | AGTTGGCAGCTCAGTGGGTGTTTAAGTATTTTCTTTGTCTCTCCCACTGCTTTTGCACTTAATGGTCCCTaGCTGAACAGCCTTGTAAAG | + |
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Preference number: 5 (lower is better) Translates to: SWQLSGCLSIFFVSPTAFALNGP*LNSLVK Trigger: CTTTACAAGGCTGTTCAGCAAGGGACCATTAAGTGC...AAAAGCAGTGGGAGAGACAAAGAAAATACTTAAACACCCACTGAGCTGCCAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS-3UTR CAA 90 bp | TTGTCTCTCCCACTGCTTTTGTCTATAAATCATGTGGTTTGCTTTTGCTCTTTTATTTCGAGGCTTGAGTaGGGTGTCAAGAGGGCCGAT | + |
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Preference number: 5 (lower is better) Translates to: LSLPLLLSINHVVCFCSFISRLE*GVKRAD Trigger: ATCGGCCCTCTTGACACCCAACTCAAGCCTCGAAAT...AAAAGAGCAAAAGCAAACCACATGATTTATAGACAAAAGCAGTGGGAGAGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS-3UTR CAA 90 bp | TTGTCTCTCCCACTGCTTTTGTCTATAAATCATGTGGTTTGCTTTTGCTCTTTTAGATCCAGCTGTCCGTaGTACACGGTCACATTGACC | + |
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Preference number: 5 (lower is better) Translates to: LSLPLLLSINHVVCFCSFRSSCP*YTVTLT Trigger: GGTCAATGTGACCGTGTACAACGGACAGCTGGATCT...AAAAGAGCAAAAGCAAACCACATGATTTATAGACAAAAGCAGTGGGAGAGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS TCA 72 bp | CTTAAGGCGTCTCCTTGCAGGTGTCTCACATGGCGCTaGCAGAGACGAACTAAGGGGCTCCGGAGGAACTCG | + |
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Preference number: 6 (lower is better) Translates to: LKASPCRCLTWR*QRRTKGLRRNS Trigger: CGAGTTCCTCCGGAGCCCCTTAGTTCGTCTCTGTCAGCGCCATGTGAGACACCTGCAAGGAGACGCCTTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS GCA 72 bp | CATCCTTTCGGACAGTCACATAATCCCATACTTCCTTaGCTTCGGGTTCCCGCCAGTCGATGGCAGATCCCG | + |
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Preference number: 6 (lower is better) Translates to: HPFGQSHNPILP*LRVPASRWQIP Trigger: CGGGATCTGCCATCGACTGGCGGGAACCCGAAGGCAAGGAAGTATGGGATTATGTGACTGTCCGAAAGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS GCA 72 bp | CAGCTGTCCGTTGTACACGGTCACATTGACCCCAGCTaGCAGCAACTTATCCACAACGTCGATGGCAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: QLSVVHGHIDPS*QQLIHNVDGRL Trigger: AAGCCTGCCATCGACGTTGTGGATAAGTTGCTGGCAGCTGGGGTCAATGTGACCGTGTACAACGGACAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS CAA 90 bp | ATGGTGTCCACAATGAGATCCAGCTGTCCGTTGTACACGGTCACATaGACCCCAGCTGCCAGCAACTTATCCACAACGTCGATGGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: MVSTMRSSCPLYTVT*TPAASNLSTTSMAG Trigger: GCCTGCCATCGACGTTGTGGATAAGTTGCTGGCAGCTGGGGTCAATGTGACCGTGTACAACGGACAGCTGGATCTCATTGTGGACACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS GCA 72 bp | AACCATCATGTCGGAAGCCACCGTGTCCAGGTCCTTTaGGTAGGCATCTGTTGTGTTGACATAGCTGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: NHHVGSHRVQVL*VGICCVDIAEA Trigger: GGCTTCAGCTATGTCAACACAACAGATGCCTACGCAAAGGACCTGGACACGGTGGCTTCCGACATGATGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS CAA 72 bp | GGCCCACTGCAGCCAGGTAGTATTTCGAGGCTTGAGTaGGGTGTCAAGAGGGCCGATTTCTTCAAAGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: GPLQPGSISRLE*GVKRADFFKVS Trigger: GGAAACTTTGAAGAAATCGGCCCTCTTGACACCCAACTCAAGCCTCGAAATACTACCTGGCTGCAGTGGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS CAA 72 bp | AGACTGGCCCACTGCAGCCAGGTAGTATTTCGAGGCTaGAGTTGGGTGTCAAGAGGGCCGATTTCTTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: RLAHCSQVVFRG*SWVSRGPISSK Trigger: CTTTGAAGAAATCGGCCCTCTTGACACCCAACTCAAGCCTCGAAATACTACCTGGCTGCAGTGGGCCAGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS CAA 72 bp | ACAATGAGATCCAGCTGTCCGTTGTACACGGTCACATaGACCCCAGCTGCCAGCAACTTATCCACAACGTCG | + |
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Preference number: 6 (lower is better) Translates to: TMRSSCPLYTVT*TPAASNLSTTS Trigger: CGACGTTGTGGATAAGTTGCTGGCAGCTGGGGTCAATGTGACCGTGTACAACGGACAGCTGGATCTCATTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS CAA 90 bp | CAGGAGACTGGCCCACTGCAGCCAGGTAGTATTTCGAGGCTTGAGTaGGGTGTCAAGAGGGCCGATTTCTTCAAAGTTTCCAAATCCAGT | + |
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Preference number: 6 (lower is better) Translates to: QETGPLQPGSISRLE*GVKRADFFKVSKSS Trigger: ACTGGATTTGGAAACTTTGAAGAAATCGGCCCTCTTGACACCCAACTCAAGCCTCGAAATACTACCTGGCTGCAGTGGGCCAGTCTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS CCA 72 bp | GCCCACTGCAGCCAGGTAGTATTTCGAGGCTTGAGTTaGGTGTCAAGAGGGCCGATTTCTTCAAAGTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: AHCSQVVFRGLS*VSRGPISSKFP Trigger: TGGAAACTTTGAAGAAATCGGCCCTCTTGACACCCAACTCAAGCCTCGAAATACTACCTGGCTGCAGTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS CAA 90 bp | AGCATCAAGGACTTGCTCTGCAATGTCGGACACCTCGGCCAAGCCTaGATTATCAAGGAGAGACATACTATACAGGTAAGGTCCCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SIKDLLCNVGHLGQA*IIKERHTIQVRSPG Trigger: TCCTGGGGACCTTACCTGTATAGTATGTCTCTCCTTGATAATCAAGGCTTGGCCGAGGTGTCCGACATTGCAGAGCAAGTCCTTGATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS GCA 72 bp | GTAGAAGCCCTTGTTTACAGCATCAAGGACTTGCTCTaGAATGTCGGACACCTCGGCCAAGCCTTGATTATC | + |
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Preference number: 6 (lower is better) Translates to: VEALVYSIKDLL*NVGHLGQALII Trigger: GATAATCAAGGCTTGGCCGAGGTGTCCGACATTGCAGAGCAAGTCCTTGATGCTGTAAACAAGGGCTTCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS CAA 90 bp | ACAAACAGGAGACTGGCCCACTGCAGCCAGGTAGTATTTCGAGGCTaGAGTTGGGTGTCAAGAGGGCCGATTTCTTCAAAGTTTCCAAAT | + |
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Preference number: 6 (lower is better) Translates to: TNRRLAHCSQVVFRG*SWVSRGPISSKFPN Trigger: ATTTGGAAACTTTGAAGAAATCGGCCCTCTTGACACCCAACTCAAGCCTCGAAATACTACCTGGCTGCAGTGGGCCAGTCTCCTGTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS CAA 90 bp | GGAGTCACCCAAAGCAACCCCAGAAAAGTTGCACTTAATGGTCCCTaGCTGAACAGCCTTGTAAAGTTCTACACTGATGCCAGCAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: GVTQSNPRKVALNGP*LNSLVKFYTDASSH Trigger: ATGGCTGCTGGCATCAGTGTAGAACTTTACAAGGCTGTTCAGCAAGGGACCATTAAGTGCAACTTTTCTGGGGTTGCTTTGGGTGACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS TCA 72 bp | GACTTAGGATCGGTGTACAGGGCCTTCCATTTTAGCTaGTTGAATTTGGACAGCTGTGGCCACTTGAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: DLGSVYRAFHFS*LNLDSCGHLSF Trigger: GAAGCTCAAGTGGCCACAGCTGTCCAAATTCAATCAGCTAAAATGGAAGGCCCTGTACACCGATCCTAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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| CDS CAA 72 bp | CAAAGCAACCCCAGAAAAGTTGCACTTAATGGTCCCTaGCTGAACAGCCTTGTAAAGTTCTACACTGATGCC | + |
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Preference number: 6 (lower is better) Translates to: QSNPRKVALNGP*LNSLVKFYTDA Trigger: GGCATCAGTGTAGAACTTTACAAGGCTGTTCAGCAAGGGACCATTAAGTGCAACTTTTCTGGGGTTGCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000287.9 |
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