Pregenerated sensors for SCP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028603Ensembl transcript IDs: ENSMUST00000030340.15, ENSMUST00000106701.2, ENSMUST00000130776.2, ENSMUST00000149106.8
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGCAGGGAGGCCCTATGTACCTCCCAGCTTCGGGGAAACACAATTaGCCACACCCAATTAGCAACAAATCTATCTCATGCTATTCGGGA | + |
|
Preference number: 1 (lower is better) Translates to: RQGGPMYLPASGKHN*PHPISNKSISCYSG Trigger: TCCCGAATAGCATGAGATAGATTTGTTGCTAATTGGGTGTGGTCAATTGTGTTTCCCCGAAGCTGGGAGGTACATAGGGCCTCCCTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| 3UTR GCA 90 bp | CCCCAAACCATCATTGACATAGTAGCTTCATCAAGCACAGTAGAATaGAAGTCCTCAAAGCAGCAGTGCAGGCAGGGAGGCCCTATGTAC | + |
|
Preference number: 1 (lower is better) Translates to: PQTIIDIVASSSTVE*KSSKQQCRQGGPMY Trigger: GTACATAGGGCCTCCCTGCCTGCACTGCTGCTTTGAGGACTTGCATTCTACTGTGCTTGATGAAGCTACTATGTCAATGATGGTTTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| 3UTR-3UTR TCA 90 bp | GTGCAGGCAGGGAGGCCCTATGTACCTCCCAGCTTCGGGGAAACACAATTGACCCTACACATCTCATCTTaGTGTCCTGAGGTTGCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: VQAGRPYVPPSFGETQLTLHISS*CPEVAK Trigger: TTTGGCAACCTCAGGACATCAAGATGAGATGTGTAG...GGTCAATTGTGTTTCCCCGAAGCTGGGAGGTACATAGGGCCTCCCTGCCTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| 3UTR-3UTR TCA 90 bp | AACACAATTGACCACACCCAATTAGCAACAAATCTATCTCATGCTATTCGGGAGCTACACATCTCATCTTaGTGTCCTGAGGTTGCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: NTIDHTQLATNLSHAIRELHISS*CPEVAK Trigger: TTTGGCAACCTCAGGACATCAAGATGAGATGTGTAG...CTCCCGAATAGCATGAGATAGATTTGTTGCTAATTGGGTGTGGTCAATTGTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| 3UTR GCA 72 bp | TCAAGCACAGTAGAATGCAAGTCCTCAAAGCAGCAGTaGAGGCAGGGAGGCCCTATGTACCTCCCAGCTTCG | + |
|
Preference number: 3 (lower is better) Translates to: SSTVECKSSKQQ*RQGGPMYLPAS Trigger: CGAAGCTGGGAGGTACATAGGGCCTCCCTGCCTGCACTGCTGCTTTGAGGACTTGCATTCTACTGTGCTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| 3UTR TCA 72 bp | GGCCCTATGTACCTCCCAGCTTCGGGGAAACACAATTaGCCACACCCAATTAGCAACAAATCTATCTCATGC | + |
|
Preference number: 3 (lower is better) Translates to: GPMYLPASGKHN*PHPISNKSISC Trigger: GCATGAGATAGATTTGTTGCTAATTGGGTGTGGTCAATTGTGTTTCCCCGAAGCTGGGAGGTACATAGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| 3UTR GCA 72 bp | ATCATTGACATAGTAGCTTCATCAAGCACAGTAGAATaGAAGTCCTCAAAGCAGCAGTGCAGGCAGGGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: IIDIVASSSTVE*KSSKQQCRQGG Trigger: GCCTCCCTGCCTGCACTGCTGCTTTGAGGACTTGCATTCTACTGTGCTTGATGAAGCTACTATGTCAATGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| 3UTR TCA 72 bp | CCCAAGGAGAAATGTCACACCGAGTGTCCAACACAGTaGTCCTCAAATATACTTCTAAGCAAAACAAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PKEKCHTECPTQ*SSNILLSKTRA Trigger: AGCCCTTGTTTTGCTTAGAAGTATATTTGAGGATCACTGTGTTGGACACTCGGTGTGACATTTCTCCTTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS-3UTR TCA 90 bp | GTGCAGGCAGGGAGGCCCTATGTACCTCCCAGCTTCGGGGAAACACAATTGACCGCTGGTGGGAGCAGCTaGAACCTGGTGCGTCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VQAGRPYVPPSFGETQLTAGGSS*NLVRPE Trigger: TTCAGGACGCACCAGGTTTCAGCTGCTCCCACCAGC...GGTCAATTGTGTTTCCCCGAAGCTGGGAGGTACATAGGGCCTCCCTGCCTGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| CDS-3UTR GCA 90 bp | CAGCAGTGCAGGCAGGGAGGCCCTATGTACCTCCCAGCTTCGGGGAAACACAATCTGCAGAGCCACCTTTaGCCCGGGAACCTGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QQCRQGGPMYLPASGKHNLQSHL*PGNLPL Trigger: AAGAGGCAGGTTCCCGGGGCAAAGGTGGCTCTGCAG...ATTGTGTTTCCCCGAAGCTGGGAGGTACATAGGGCCTCCCTGCCTGCACTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS-3UTR CCA 90 bp | CAGCAGTGCAGGCAGGGAGGCCCTATGTACCTCCCAGCTTCGGGGAAACACAATGGAGCAGCTGAAACCTaGTGCGTCCTGAAGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QQCRQGGPMYLPASGKHNGAAET*CVLKEL Trigger: CAGCTCCTTCAGGACGCACCAGGTTTCAGCTGCTCC...ATTGTGTTTCCCCGAAGCTGGGAGGTACATAGGGCCTCCCTGCCTGCACTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGTGCAGGCAGGGAGGCCCTATGTACCTCCCAGCTTCGGGGAAACACAATTCCCCTGCAGAGCTGGTaGGAGCAGCTGAAACCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSAGREALCTSQLRGNTIPLQSW*EQLKPG Trigger: ACCAGGTTTCAGCTGCTCCCACCAGCTCTGCAGGGG...AATTGTGTTTCCCCGAAGCTGGGAGGTACATAGGGCCTCCCTGCCTGCACTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| CDS-3UTR TCA 90 bp | AGTGCAGGCAGGGAGGCCCTATGTACCTCCCAGCTTCGGGGAAACACAATTGACCAGTGGGTGTCCCTTTaGGATGAGGCCTCCACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SAGREALCTSQLRGNTIDQWVSL*DEASTR Trigger: CCTAGTGGAGGCCTCATCTCAAAGGGACACCCACTG...GTCAATTGTGTTTCCCCGAAGCTGGGAGGTACATAGGGCCTCCCTGCCTGCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS-3UTR GCA 90 bp | AGTGCAGGCAGGGAGGCCCTATGTACCTCCCAGCTTCGGGGAAACACAATTGACCTTGAATCCATCCCCTaGAGAGCTGGTGGGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SAGREALCTSQLRGNTIDLESIP*RAGGSS Trigger: GCTGCTCCCACCAGCTCTGCAGGGGATGGATTCAAG...GTCAATTGTGTTTCCCCGAAGCTGGGAGGTACATAGGGCCTCCCTGCCTGCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| CDS-3UTR TCA 90 bp | CAGCAGTGCAGGCAGGGAGGCCCTATGTACCTCCCAGCTTCGGGGAAACACAATCAAAGCCAGCAAGTCTaGGTCGGCCATGGTGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: QQCRQGGPMYLPASGKHNQSQQV*VGHGDC Trigger: ACAATCACCATGGCCGACTCAGACTTGCTGGCTTTG...ATTGTGTTTCCCCGAAGCTGGGAGGTACATAGGGCCTCCCTGCCTGCACTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| CDS-3UTR CCA 90 bp | CAGCAGTGCAGGCAGGGAGGCCCTATGTACCTCCCAGCTTCGGGGAAACACAATCCCTCTGCCCACTGGTaGAATCACCATACACATAGC | + |
|
Preference number: 4 (lower is better) Translates to: QQCRQGGPMYLPASGKHNPSAHW*NHHTHS Trigger: GCTATGTGTATGGTGATTCCACCAGTGGGCAGAGGG...ATTGTGTTTCCCCGAAGCTGGGAGGTACATAGGGCCTCCCTGCCTGCACTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS-3UTR TCA 90 bp | AGCAGTGCAGGCAGGGAGGCCCTATGTACCTCCCAGCTTCGGGGAAACACAATTGTCAGCCTTCTTATCTaGATTGGGAAGCACAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: SSAGREALCTSQLRGNTIVSLLI*IGKHRS Trigger: GGATCTGTGCTTCCCAATTCAGATAAGAAGGCTGAC...AATTGTGTTTCCCCGAAGCTGGGAGGTACATAGGGCCTCCCTGCCTGCACTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGTGCAGGCAGGGAGGCCCTATGTACCTCCCAGCTTCGGGGAAACACAATTGAGGTGGGGCAGCATTaGAAGATAGTCAGAAAATCG | + |
|
Preference number: 4 (lower is better) Translates to: SSAGREALCTSQLRGNTIEVGQH*KIVRKS Trigger: CGATTTTCTGACTATCTTGCAATGCTGCCCCACCTC...AATTGTGTTTCCCCGAAGCTGGGAGGTACATAGGGCCTCCCTGCCTGCACTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS-3UTR TCA 90 bp | ACCTCCCAGCTTCGGGGAAACACAATTGACCACACCCAATTAGCAACAAATCTAAAACCTGGTGCGTCCTaGAGGAGCTGGCAGCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: TSQLRGNTIDHTQLATNLKPGAS*RSWQLR Trigger: CCGAAGCTGCCAGCTCCTTCAGGACGCACCAGGTTT...TAGATTTGTTGCTAATTGGGTGTGGTCAATTGTGTTTCCCCGAAGCTGGGAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| CDS-3UTR TCA 90 bp | TCTCTACCTATCTACACATCTCATCTTGATGTCCTGAGGTTGCCAAAGGGACTCGCTGGTGGGAGCAGCTaGAACCTGGTGCGTCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLPIYTSHLDVLRLPKGLAGGSS*NLVRPE Trigger: TTCAGGACGCACCAGGTTTCAGCTGCTCCCACCAGC...GAGTCCCTTTGGCAACCTCAGGACATCAAGATGAGATGTGTAGATAGGTAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| CDS-3UTR CCA 90 bp | ACGAGACGTGGATCTCTACCTATCTACACATCTCATCTTGATGTCCTGAGGTTGCCCCTGCAGAGCTGGTaGGAGCAGCTGAAACCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TRRGSLPIYTSHLDVLRLPLQSW*EQLKPG Trigger: ACCAGGTTTCAGCTGCTCCCACCAGCTCTGCAGGGG...CAACCTCAGGACATCAAGATGAGATGTGTAGATAGGTAGAGATCCACGTCTCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTACCTATCTACACATCTCATCTTGATGTCCTGAGGTTGCCAAAGGGACTCAGGCCTAGATTGTGCTaGAGAGCCACCTTTGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SLPIYTSHLDVLRLPKGLRPRLC*RATFAP Trigger: CGGGGCAAAGGTGGCTCTGCAGCACAATCTAGGCCT...GAGTCCCTTTGGCAACCTCAGGACATCAAGATGAGATGTGTAGATAGGTAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS-3UTR GCA 90 bp | ACCTCCCAGCTTCGGGGAAACACAATTGACCACACCCAATTAGCAACAAATCTACCGAGGCCTAGATTGTaGTGCAGAGCCACCTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TSQLRGNTIDHTQLATNLPRPRL*CRATFA Trigger: GGCAAAGGTGGCTCTGCAGCACAATCTAGGCCTCGG...TAGATTTGTTGCTAATTGGGTGTGGTCAATTGTGTTTCCCCGAAGCTGGGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS-3UTR CCA 90 bp | TCTCTACCTATCTACACATCTCATCTTGATGTCCTGAGGTTGCCAAAGGGACTCCATCCCCTGCAGAGCTaGTGGGAGCAGCTGAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: SLPIYTSHLDVLRLPKGLHPLQS*WEQLKP Trigger: AGGTTTCAGCTGCTCCCACCAGCTCTGCAGGGGATG...GAGTCCCTTTGGCAACCTCAGGACATCAAGATGAGATGTGTAGATAGGTAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| CDS-3UTR TCA 90 bp | ACCTCCCAGCTTCGGGGAAACACAATTGACCACACCCAATTAGCAACAAATCTACTGAGTCGGCCATGGTaGTTGTGCAGTCAGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSQLRGNTIDHTQLATNLLSRPW*LCSQPS Trigger: AGAAGGCTGACTGCACAATCACCATGGCCGACTCAG...TAGATTTGTTGCTAATTGGGTGTGGTCAATTGTGTTTCCCCGAAGCTGGGAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGTGCAGGCAGGGAGGCCCTATGTACCTCCCAGCTTCGGGGAAACACAATTAGAATTTTGTTCCAATaGATCCCCTCTCCATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSAGREALCTSQLRGNTIRILFQ*IPSPSS Trigger: AGAAGATGGAGAGGGGATCCATTGGAACAAAATTCT...AATTGTGTTTCCCCGAAGCTGGGAGGTACATAGGGCCTCCCTGCCTGCACTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS-3UTR CCA 90 bp | ACCTCCCAGCTTCGGGGAAACACAATTGACCACACCCAATTAGCAACAAATCTATCACGTCGACATCGTTaGGTGTCAGGCCGGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSQLRGNTIDHTQLATNLSRRHR*VSGRTS Trigger: AGAAGTCCGGCCTGACACCCAACGATGTCGACGTGA...TAGATTTGTTGCTAATTGGGTGTGGTCAATTGTGTTTCCCCGAAGCTGGGAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS-3UTR CCA 90 bp | ACGAGACGTGGATCTCTACCTATCTACACATCTCATCTTGATGTCCTGAGGTTGTCCACCTTGTCCTTCTaGACAGAGCCCCAGTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TRRGSLPIYTSHLDVLRLSTLSF*TEPQCF Trigger: GAAGCACTGGGGCTCTGTCCAGAAGGACAAGGTGGA...CAACCTCAGGACATCAAGATGAGATGTGTAGATAGGTAGAGATCCACGTCTCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS-3UTR TCA 90 bp | ATGTCACACCGAGTGTCCAACACAGTGATCCTCAAATATACTTCTAAGCAAAACAAACCTGGTGCGTCCTaGAGGAGCTGGCAGCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: MSHRVSNTVILKYTSKQNKPGAS*RSWQLR Trigger: CCGAAGCTGCCAGCTCCTTCAGGACGCACCAGGTTT...GTTTTGCTTAGAAGTATATTTGAGGATCACTGTGTTGGACACTCGGTGTGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS-3UTR TCA 90 bp | CACCCAATTAGCAACAAATCTATCTCATGCTATTCGGGAGGTGTCAGTCTAAGCCTGAGTCGGCCATGGTaGTTGTGCAGTCAGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HPISNKSISCYSGGVSLSLSRPW*LCSQPS Trigger: AGAAGGCTGACTGCACAATCACCATGGCCGACTCAG...GCTTAGACTGACACCTCCCGAATAGCATGAGATAGATTTGTTGCTAATTGGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| CDS-3UTR TCA 90 bp | ATGTCACACCGAGTGTCCAACACAGTGATCCTCAAATATACTTCTAAGCAAAACCCATCCTGTAGAGGGTaGCAACCACAGCTCCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: MSHRVSNTVILKYTSKQNPSCRG*QPQLLR Trigger: TCGGAGGAGCTGTGGTTGTCACCCTCTACAGGATGG...GTTTTGCTTAGAAGTATATTTGAGGATCACTGTGTTGGACACTCGGTGTGACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS-3UTR TCA 90 bp | CACCCAATTAGCAACAAATCTATCTCATGCTATTCGGGAGGTGTCAGTCTAAGCCAAAGCCAGCAAGTCTaGGTCGGCCATGGTGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: HPISNKSISCYSGGVSLSQSQQV*VGHGDC Trigger: ACAATCACCATGGCCGACTCAGACTTGCTGGCTTTG...GCTTAGACTGACACCTCCCGAATAGCATGAGATAGATTTGTTGCTAATTGGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| CDS-3UTR GCA 90 bp | CGTGGATCTCTACCTATCTACACATCTCATCTTGATGTCCTGAGGTTGCCAAAGCAATGCCTTCTGGCCTaGTTCCTTTGCCATATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RGSLPIYTSHLDVLRLPKQCLLA*FLCHIR Trigger: CCTGATATGGCAAAGGAAGCAGGCCAGAAGGCATTG...CTTTGGCAACCTCAGGACATCAAGATGAGATGTGTAGATAGGTAGAGATCCACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS-3UTR GCA 90 bp | TCTCTACCTATCTACACATCTCATCTTGATGTCCTGAGGTTGCCAAAGGGACTCCTGTGCATCTTCCAATaGCTTCTGGCCTGCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLPIYTSHLDVLRLPKGLLCIFQ*LLACFL Trigger: AAGGAAGCAGGCCAGAAGGCATTGGAAGATGCACAG...GAGTCCCTTTGGCAACCTCAGGACATCAAGATGAGATGTGTAGATAGGTAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS-3UTR GCA 90 bp | AACACAATTGACCACACCCAATTAGCAACAAATCTATCTCATGCTATTCGGGAGCTTGAATCCATCCCCTaGAGAGCTGGTGGGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NTIDHTQLATNLSHAIRELESIP*RAGGSS Trigger: GCTGCTCCCACCAGCTCTGCAGGGGATGGATTCAAG...CTCCCGAATAGCATGAGATAGATTTGTTGCTAATTGGGTGTGGTCAATTGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| CDS-3UTR CCA 90 bp | AACACAATTGACCACACCCAATTAGCAACAAATCTATCTCATGCTATTCGGGAGGGAGCAGCTGAAACCTaGTGCGTCCTGAAGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NTIDHTQLATNLSHAIREGAAET*CVLKEL Trigger: CAGCTCCTTCAGGACGCACCAGGTTTCAGCTGCTCC...CTCCCGAATAGCATGAGATAGATTTGTTGCTAATTGGGTGTGGTCAATTGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| CDS-3UTR CCA 90 bp | AACACAATTGACCACACCCAATTAGCAACAAATCTATCTCATGCTATTCGGGAGCATCCCCTGCAGAGCTaGTGGGAGCAGCTGAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: NTIDHTQLATNLSHAIREHPLQS*WEQLKP Trigger: AGGTTTCAGCTGCTCCCACCAGCTCTGCAGGGGATG...CTCCCGAATAGCATGAGATAGATTTGTTGCTAATTGGGTGTGGTCAATTGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| CDS-3UTR GCA 90 bp | ACGAGACGTGGATCTCTACCTATCTACACATCTCATCTTGATGTCCTGAGGTTGCTTAAAGACGAGGTTTaGCTTGAATCCATCCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TRRGSLPIYTSHLDVLRLLKDEV*LESIPC Trigger: GCAGGGGATGGATTCAAGGCAAACCTCGTCTTTAAG...CAACCTCAGGACATCAAGATGAGATGTGTAGATAGGTAGAGATCCACGTCTCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| CDS-3UTR CCA 90 bp | ACCTCCCAGCTTCGGGGAAACACAATTGACCACACCCAATTAGCAACAAATCTAGGTTCTGTAGTTTCATaGCCAGTCCCATGTTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: TSQLRGNTIDHTQLATNLGSVVS*PVPCYQ Trigger: CTGGTAACATGGGACTGGCCATGAAACTACAGAACC...TAGATTTGTTGCTAATTGGGTGTGGTCAATTGTGTTTCCCCGAAGCTGGGAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| CDS-3UTR TCA 90 bp | CACCCAATTAGCAACAAATCTATCTCATGCTATTCGGGAGGTGTCAGTCTAAGCGTCAGCCTTCTTATCTaGATTGGGAAGCACAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: HPISNKSISCYSGGVSLSVSLLI*IGKHRS Trigger: GGATCTGTGCTTCCCAATTCAGATAAGAAGGCTGAC...GCTTAGACTGACACCTCCCGAATAGCATGAGATAGATTTGTTGCTAATTGGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| CDS-3UTR GCA 90 bp | CACCCAATTAGCAACAAATCTATCTCATGCTATTCGGGAGGTGTCAGTCTAAGCCTTAAAGACGAGGTTTaGCTTGAATCCATCCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HPISNKSISCYSGGVSLSLKDEV*LESIPC Trigger: GCAGGGGATGGATTCAAGGCAAACCTCGTCTTTAAG...GCTTAGACTGACACCTCCCGAATAGCATGAGATAGATTTGTTGCTAATTGGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| CDS-3UTR GCA 90 bp | CGTGGATCTCTACCTATCTACACATCTCATCTTGATGTCCTGAGGTTGCCAAAGGAAGCACAGATCCTTTaGCATTCTTCACATCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: RGSLPIYTSHLDVLRLPKEAQIL*HSSHPP Trigger: TGGTGGATGTGAAGAATGGCAAAGGATCTGTGCTTC...CTTTGGCAACCTCAGGACATCAAGATGAGATGTGTAGATAGGTAGAGATCCACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| CDS-3UTR TCA 90 bp | ATGTCACACCGAGTGTCCAACACAGTGATCCTCAAATATACTTCTAAGCAAAACATCAGGATAGTCTCTTaGGTTCTCACCTCCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: MSHRVSNTVILKYTSKQNIRIVS*VLTSRL Trigger: AAGCCTGGAGGTGAGAACTCAAGAGACTATCCTGAT...GTTTTGCTTAGAAGTATATTTGAGGATCACTGTGTTGGACACTCGGTGTGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS-3UTR CCA 90 bp | ACGAGACGTGGATCTCTACCTATCTACACATCTCATCTTGATGTCCTGAGGTTGTCTCTTCAAACGTACTaGGTAAGTCAGTCATCATCT | + |
|
Preference number: 4 (lower is better) Translates to: TRRGSLPIYTSHLDVLRLSLQTY*VSQSSS Trigger: AGATGATGACTGACTTACCCAGTACGTTTGAAGAGA...CAACCTCAGGACATCAAGATGAGATGTGTAGATAGGTAGAGATCCACGTCTCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS-3UTR CCA 90 bp | CGTGGATCTCTACCTATCTACACATCTCATCTTGATGTCCTGAGGTTGCCAAAGTCTCATAGCATCTCCTaGCAGCTTCTTTACTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: RGSLPIYTSHLDVLRLPKSHSIS*QLLYSY Trigger: ATATGAGTAAAGAAGCTGCCAGGAGATGCTATGAGA...CTTTGGCAACCTCAGGACATCAAGATGAGATGTGTAGATAGGTAGAGATCCACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS-3UTR GCA 90 bp | CTAAGCAAAACAAGGGCTTTGTTTACTCAGTCTTCAGATTTTACTGTTCTGAATCACATAGCCAACGCATaGCTGTTCCACTGCGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSKTRALFTQSSDFTVLNHIANA*LFHCGV Trigger: TACTCCGCAGTGGAACAGGCATGCGTTGGCTATGTG...ATTCAGAACAGTAAAATCTGAAGACTGAGTAAACAAAGCCCTTGTTTTGCTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS-3UTR GCA 90 bp | AACACAATTGACCACACCCAATTAGCAACAAATCTATCTCATGCTATTCGGGAGGAAGCACAGATCCTTTaGCATTCTTCACATCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: NTIDHTQLATNLSHAIREEAQIL*HSSHPP Trigger: TGGTGGATGTGAAGAATGGCAAAGGATCTGTGCTTC...CTCCCGAATAGCATGAGATAGATTTGTTGCTAATTGGGTGTGGTCAATTGTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| CDS-3UTR GCA 90 bp | CTAAGCAAAACAAGGGCTTTGTTTACTCAGTCTTCAGATTTTACTGTTCTGAATAGCCAACACACAATTTaGCAAGCCTCCTTGAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSKTRALFTQSSDFTVLNSQHTI*QASLNQ Trigger: CTGATTCAAGGAGGCTTGGCAAATTGTGTGTTGGCT...ATTCAGAACAGTAAAATCTGAAGACTGAGTAAACAAAGCCCTTGTTTTGCTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS-3UTR CCA 90 bp | CTAAGCAAAACAAGGGCTTTGTTTACTCAGTCTTCAGATTTTACTGTTCTGAATAAGCTGTATTCATCTTaGAACTGGGAATACGTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LSKTRALFTQSSDFTVLNKLYSS*NWEYVL Trigger: TAACACGTATTCCCAGTTCCAAGATGAATACAGCTT...ATTCAGAACAGTAAAATCTGAAGACTGAGTAAACAAAGCCCTTGTTTTGCTTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS TCA 90 bp | CTCCGCGCACTGAGCCAGACCTGTTGCGCCCAGTGGGTGTCCCTTTaGGATGAGGCCTCCACTAGGGTTGATGACCCACTTTCCTCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: LRALSQTCCAQWVSL*DEASTRVDDPLSSV Trigger: TACGGAGGAAAGTGGGTCATCAACCCTAGTGGAGGCCTCATCTCAAAGGGACACCCACTGGGCGCAACAGGTCTGGCTCAGTGCGCGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS-3UTR CAA 90 bp | GTGCAGGCAGGGAGGCCCTATGTACCTCCCAGCTTCGGGGAAACACAATTGACCCACCAGGGTTCCACCTaGTCCTTCTGGACAGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VQAGRPYVPPSFGETQLTHQGST*SFWTEP Trigger: GGGCTCTGTCCAGAAGGACAAGGTGGAACCCTGGTG...GGTCAATTGTGTTTCCCCGAAGCTGGGAGGTACATAGGGCCTCCCTGCCTGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS-3UTR CAA 90 bp | GTGCAGGCAGGGAGGCCCTATGTACCTCCCAGCTTCGGGGAAACACAATTGACCCCAGGCTTCATGAACTaGGTCATGCCAACGCCGACC | + |
|
Preference number: 5 (lower is better) Translates to: VQAGRPYVPPSFGETQLTPGFMN*VMPTPT Trigger: GGTCGGCGTTGGCATGACCAAGTTCATGAAGCCTGG...GGTCAATTGTGTTTCCCCGAAGCTGGGAGGTACATAGGGCCTCCCTGCCTGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS GCA 90 bp | AAGTCAGTCATCATCTCCTGGGCCACAATCTCCACCGCTTTGGACTaGAGGCCGTACTGCTGCACAAACTCCTCGCTGGACAGAATCGCG | + |
|
Preference number: 5 (lower is better) Translates to: KSVIISWATISTALD*RPYCCTNSSLDRIA Trigger: CGCGATTCTGTCCAGCGAGGAGTTTGTGCAGCAGTACGGCCTGCAGTCCAAAGCGGTGGAGATTGTGGCCCAGGAGATGATGACTGACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000149106.8 |
||
| CDS-3UTR CAA 90 bp | AGCAGTGCAGGCAGGGAGGCCCTATGTACCTCCCAGCTTCGGGGAAACACAATTACCCAGGTAGCTTCTTaGCCTCCAGGGCCATCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSAGREALCTSQLRGNTITQVAS*PPGPSF Trigger: GAAAGATGGCCCTGGAGGCAAAGAAGCTACCTGGGT...AATTGTGTTTCCCCGAAGCTGGGAGGTACATAGGGCCTCCCTGCCTGCACTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| CDS CCA 90 bp | TGGGTAAGTCAGTCATCATCTCCTGGGCCACAATCTCCACCGCTTTaGACTGCAGGCCGTACTGCTGCACAAACTCCTCGCTGGACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: WVSQSSSPGPQSPPL*TAGRTAAQTPRWTE Trigger: TTCTGTCCAGCGAGGAGTTTGTGCAGCAGTACGGCCTGCAGTCCAAAGCGGTGGAGATTGTGGCCCAGGAGATGATGACTGACTTACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000149106.8 |
||
| CDS GCA 90 bp | AGCCCTCTGCCCACTGGTGGAATCACCATACACATAGCCAACGCATaGCTGTTCCACTGCGGAGTAAGGGATCTGTGCATCTTCCAATGC | + |
|
Preference number: 5 (lower is better) Translates to: SPLPTGGITIHIANA*LFHCGVRDLCIFQC Trigger: GCATTGGAAGATGCACAGATCCCTTACTCCGCAGTGGAACAGGCATGCGTTGGCTATGTGTATGGTGATTCCACCAGTGGGCAGAGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000130776.2 |
||
| CDS-3UTR CAA 90 bp | CAGCAGTGCAGGCAGGGAGGCCCTATGTACCTCCCAGCTTCGGGGAAACACAATGAGCCAACACACAATTaGCCAAGCCTCCTTGAATCA | + |
|
Preference number: 5 (lower is better) Translates to: QQCRQGGPMYLPASGKHNEPTHN*PSLLES Trigger: TGATTCAAGGAGGCTTGGCAAATTGTGTGTTGGCTC...ATTGTGTTTCCCCGAAGCTGGGAGGTACATAGGGCCTCCCTGCCTGCACTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS-3UTR CAA 90 bp | CGTGGATCTCTACCTATCTACACATCTCATCTTGATGTCCTGAGGTTGCCAAAGGCTGCAGAGCCACCTTaGCCCCGGGAACCTGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RGSLPIYTSHLDVLRLPKAAEPP*PREPAS Trigger: AGAGGCAGGTTCCCGGGGCAAAGGTGGCTCTGCAGC...CTTTGGCAACCTCAGGACATCAAGATGAGATGTGTAGATAGGTAGAGATCCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS-3UTR CAA 90 bp | CAGCAGTGCAGGCAGGGAGGCCCTATGTACCTCCCAGCTTCGGGGAAACACAATGCCTTCTTATCTGAATaGGGAAGCACAGATCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: QQCRQGGPMYLPASGKHNAFLSE*GSTDPL Trigger: CAAAGGATCTGTGCTTCCCAATTCAGATAAGAAGGC...ATTGTGTTTCCCCGAAGCTGGGAGGTACATAGGGCCTCCCTGCCTGCACTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| CDS-3UTR CAA 90 bp | GTGCAGGCAGGGAGGCCCTATGTACCTCCCAGCTTCGGGGAAACACAATTGACCGCCTTCTTATCTGAATaGGGAAGCACAGATCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VQAGRPYVPPSFGETQLTAFLSE*GSTDPL Trigger: CAAAGGATCTGTGCTTCCCAATTCAGATAAGAAGGC...GGTCAATTGTGTTTCCCCGAAGCTGGGAGGTACATAGGGCCTCCCTGCCTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| CDS-3UTR CAA 90 bp | AGTGCAGGCAGGGAGGCCCTATGTACCTCCCAGCTTCGGGGAAACACAATTGACAATCTTCAGTTTCCCTaGAAAGAAGGCCGACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SAGREALCTSQLRGNTIDNLQFP*KEGRLR Trigger: CCTCAGTCGGCCTTCTTTCAAGGGAAACTGAAGATT...GTCAATTGTGTTTCCCCGAAGCTGGGAGGTACATAGGGCCTCCCTGCCTGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| CDS TCA 90 bp | CAATGCCTTCTGGCCTGCTTCCTTTGCCATATCAGGATAGTCTCTTaGGTTCTCACCTCCAGGCTTCATGAACTTGGTCATGCCAACGCC | + |
|
Preference number: 5 (lower is better) Translates to: QCLLACFLCHIRIVS*VLTSRLHELGHANA Trigger: GGCGTTGGCATGACCAAGTTCATGAAGCCTGGAGGTGAGAACTCAAGAGACTATCCTGATATGGCAAAGGAAGCAGGCCAGAAGGCATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000149106.8 |
||
| CDS GCA 90 bp | TCTGTCCACCAGGGTTCCACCTTGTCCTTCTGGACAGAGCCCCAGTaGTTCGTAAGTGATGAGTTCATTGACAGAGAAGCAATCGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SVHQGSTLSFWTEPQ*FVSDEFIDREAIVK Trigger: CTTCACGATTGCTTCTCTGTCAATGAACTCATCACTTACGAAGCACTGGGGCTCTGTCCAGAAGGACAAGGTGGAACCCTGGTGGACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS CCA 90 bp | ATACTTTTCTCTTCAAACGTACTGGGTAAGTCAGTCATCATCTCCTaGGCCACAATCTCCACCGCTTTGGACTGCAGGCCGTACTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ILFSSNVLGKSVIIS*ATISTALDCRPYCC Trigger: GCAGCAGTACGGCCTGCAGTCCAAAGCGGTGGAGATTGTGGCCCAGGAGATGATGACTGACTTACCCAGTACGTTTGAAGAGAAAAGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000149106.8 |
||
| CDS GCA 90 bp | AAGAGCCAACACACAATTTGCCAAGCCATACACATAGCCAACGCATaGCTGTTCCACTGCGGAGTAAGGGATCTGTGCATCTTCCAATGC | + |
|
Preference number: 5 (lower is better) Translates to: KSQHTICQAIHIANA*LFHCGVRDLCIFQC Trigger: GCATTGGAAGATGCACAGATCCCTTACTCCGCAGTGGAACAGGCATGCGTTGGCTATGTGTATGGCTTGGCAAATTGTGTGTTGGCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149106.8 |
||
| CDS-3UTR CAA 90 bp | CACCCAATTAGCAACAAATCTATCTCATGCTATTCGGGAGGTGTCAGTCTAAGCAGGCCTCCACTAGGGTaGATGACCCACTTTCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: HPISNKSISCYSGGVSLSRPPLG*MTHFPP Trigger: CGGAGGAAAGTGGGTCATCAACCCTAGTGGAGGCCT...GCTTAGACTGACACCTCCCGAATAGCATGAGATAGATTTGTTGCTAATTGGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS-3UTR CAA 90 bp | ACGAGACGTGGATCTCTACCTATCTACACATCTCATCTTGATGTCCTGAGGTTGACCCAGGTAGCTTCTTaGCCTCCAGGGCCATCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TRRGSLPIYTSHLDVLRLTQVAS*PPGPSF Trigger: GAAAGATGGCCCTGGAGGCAAAGAAGCTACCTGGGT...CAACCTCAGGACATCAAGATGAGATGTGTAGATAGGTAGAGATCCACGTCTCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| CDS TCA 90 bp | TCATTTTTCCAGTCATCAAAGCCAGCAAGTCTGAGTCGGCCATGGTaGTTGTGCAGTCAGCCTTCTTATCTGAATTGGGAAGCACAGATC | + |
|
Preference number: 5 (lower is better) Translates to: SFFQSSKPASLSRPW*LCSQPSYLNWEAQI Trigger: GATCTGTGCTTCCCAATTCAGATAAGAAGGCTGACTGCACAATCACCATGGCCGACTCAGACTTGCTGGCTTTGATGACTGGAAAAATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| CDS-3UTR CAA 90 bp | TCTCTACCTATCTACACATCTCATCTTGATGTCCTGAGGTTGCCAAAGGGACTCTATCAGGATAGTCTCTaGAGTTCTCACCTCCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLPIYTSHLDVLRLPKGLYQDSL*SSHLQA Trigger: AGCCTGGAGGTGAGAACTCAAGAGACTATCCTGATA...GAGTCCCTTTGGCAACCTCAGGACATCAAGATGAGATGTGTAGATAGGTAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS-3UTR CAA 90 bp | CTAAGCAAAACAAGGGCTTTGTTTACTCAGTCTTCAGATTTTACTGTTCTGAATACTGAGCCAGACCTGTaGCGCCCAGTGGGTGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LSKTRALFTQSSDFTVLNTEPDL*RPVGVP Trigger: AGGGACACCCACTGGGCGCAACAGGTCTGGCTCAGT...ATTCAGAACAGTAAAATCTGAAGACTGAGTAAACAAAGCCCTTGTTTTGCTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS-3UTR CAA 90 bp | CGTGGATCTCTACCTATCTACACATCTCATCTTGATGTCCTGAGGTTGCCAAAGAATCTTCAGTTTCCCTaGAAAGAAGGCCGACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RGSLPIYTSHLDVLRLPKNLQFP*KEGRLR Trigger: CCTCAGTCGGCCTTCTTTCAAGGGAAACTGAAGATT...CTTTGGCAACCTCAGGACATCAAGATGAGATGTGTAGATAGGTAGAGATCCACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| CDS-3UTR CAA 90 bp | AACACAATTGACCACACCCAATTAGCAACAAATCTATCTCATGCTATTCGGGAGGGAAGCACAGATCCTTaGCCATTCTTCACATCCACC | + |
|
Preference number: 5 (lower is better) Translates to: NTIDHTQLATNLSHAIREGSTDP*PFFTST Trigger: GGTGGATGTGAAGAATGGCAAAGGATCTGTGCTTCC...CTCCCGAATAGCATGAGATAGATTTGTTGCTAATTGGGTGTGGTCAATTGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| CDS-3UTR CAA 90 bp | CTTCTAAGCAAAACAAGGGCTTTGTTTACTCAGTCTTCAGATTTTACTGTTCTGGGAAGCACAGATCCTTaGCCATTCTTCACATCCACC | + |
|
Preference number: 5 (lower is better) Translates to: LLSKTRALFTQSSDFTVLGSTDP*PFFTST Trigger: GGTGGATGTGAAGAATGGCAAAGGATCTGTGCTTCC...CAGAACAGTAAAATCTGAAGACTGAGTAAACAAAGCCCTTGTTTTGCTTAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS TCA 90 bp | GTTCCATATTTTTCCATATGTTCTTTCCCAGCATACCCAAACATCTaGGGAGTAATCGGATGTGCAGACAATCCATACTTATCGATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VPYFSICSFPAYPNI*GVIGCADNPYLSIK Trigger: CTTGATCGATAAGTATGGATTGTCTGCACATCCGATTACTCCTCAGATGTTTGGGTATGCTGGGAAAGAACATATGGAAAAATATGGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000149106.8 |
||
| CDS CCA 90 bp | ATCCATACTTATCGATCAAGACTTCAATATGTTTATCAGTTGGAGTaGTCCGATCTGAGAATTTTGTTCCAATGGATCCCCTCTCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: IHTYRSRLQYVYQLE*SDLRILFQWIPSPS Trigger: AGATGGAGAGGGGATCCATTGGAACAAAATTCTCAGATCGGACCACTCCAACTGATAAACATATTGAAGTCTTGATCGATAAGTATGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000149106.8 |
||
| CDS-3UTR CAA 90 bp | CTAAGCAAAACAAGGGCTTTGTTTACTCAGTCTTCAGATTTTACTGTTCTGAATGCCTCCTTGAATCAGTaGATGGGCCATAAACAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSKTRALFTQSSDFTVLNASLNQ*MGHKQS Trigger: GCTTTGTTTATGGCCCATCAACTGATTCAAGGAGGC...ATTCAGAACAGTAAAATCTGAAGACTGAGTAAACAAAGCCCTTGTTTTGCTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS GCA 90 bp | ATGTTCTTTCCCAGCATACCCAAACATCTGAGGAGTAATCGGATGTaGAGACAATCCATACTTATCGATCAAGACTTCAATATGTTTATC | + |
|
Preference number: 5 (lower is better) Translates to: MFFPSIPKHLRSNRM*RQSILIDQDFNMFI Trigger: GATAAACATATTGAAGTCTTGATCGATAAGTATGGATTGTCTGCACATCCGATTACTCCTCAGATGTTTGGGTATGCTGGGAAAGAACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000149106.8 |
||
| CDS CAA 72 bp | CTCCTCCGAGGCCTAGATTGTGCTGCAGAGCCACCTTaGCCCCGGGAACCTGCCTCTTTCCGGCTTCGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLRGLDCAAEPP*PREPASFRLRL Trigger: GAGGCGAAGCCGGAAAGAGGCAGGTTCCCGGGGCAAAGGTGGCTCTGCAGCACAATCTAGGCCTCGGAGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS CAA 90 bp | CAACCACAGCTCCTCCGAGGCCTAGATTGTGCTGCAGAGCCACCTTaGCCCCGGGAACCTGCCTCTTTCCGGCTTCGCCTCTCAGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: QPQLLRGLDCAAEPP*PREPASFRLRLSAA Trigger: GGCAGCTGAGAGGCGAAGCCGGAAAGAGGCAGGTTCCCGGGGCAAAGGTGGCTCTGCAGCACAATCTAGGCCTCGGAGGAGCTGTGGTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS GCA 72 bp | AGGGTGACAACCACAGCTCCTCCGAGGCCTAGATTGTaGTGCAGAGCCACCTTTGCCCCGGGAACCTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RVTTTAPPRPRL*CRATFAPGTCL Trigger: GAGGCAGGTTCCCGGGGCAAAGGTGGCTCTGCAGCACAATCTAGGCCTCGGAGGAGCTGTGGTTGTCACCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS GCA 72 bp | TCCCCTGCAGAGCTGGTGGGAGCAGCTGAAACCTGGTaGGTCCTGAAGGAGCTGGCAGCTTCGGGAAAACCC | + |
|
Preference number: 6 (lower is better) Translates to: SPAELVGAAETW*VLKELAASGKP Trigger: GGGTTTTCCCGAAGCTGCCAGCTCCTTCAGGACGCACCAGGTTTCAGCTGCTCCCACCAGCTCTGCAGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| CDS GCA 72 bp | GTGACAACCACAGCTCCTCCGAGGCCTAGATTGTGCTaGAGAGCCACCTTTGCCCCGGGAACCTGCCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: VTTTAPPRPRLC*RATFAPGTCLF Trigger: AAAGAGGCAGGTTCCCGGGGCAAAGGTGGCTCTGCAGCACAATCTAGGCCTCGGAGGAGCTGTGGTTGTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS TCA 72 bp | CTGAGCCAGACCTGTTGCGCCCAGTGGGTGTCCCTTTaGGATGAGGCCTCCACTAGGGTTGATGACCCACTT | + |
|
Preference number: 6 (lower is better) Translates to: LSQTCCAQWVSL*DEASTRVDDPL Trigger: AAGTGGGTCATCAACCCTAGTGGAGGCCTCATCTCAAAGGGACACCCACTGGGCGCAACAGGTCTGGCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS CAA 90 bp | CTGGGTAAGTCAGTCATCATCTCCTGGGCCACAATCTCCACCGCTTaGGACTGCAGGCCGTACTGCTGCACAAACTCCTCGCTGGACAGA | + |
|
Preference number: 6 (lower is better) Translates to: LGKSVIISWATISTA*DCRPYCCTNSSLDR Trigger: TCTGTCCAGCGAGGAGTTTGTGCAGCAGTACGGCCTGCAGTCCAAAGCGGTGGAGATTGTGGCCCAGGAGATGATGACTGACTTACCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000149106.8 |
||
| CDS TCA 72 bp | AGCTGGCAGCTTCGGGAAAACCCATCCTGTAGAGGGTaGCAACCACAGCTCCTCCGAGGCCTAGATTGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SWQLRENPSCRG*QPQLLRGLDCA Trigger: AGCACAATCTAGGCCTCGGAGGAGCTGTGGTTGTCACCCTCTACAGGATGGGTTTTCCCGAAGCTGCCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS CAA 72 bp | GTAAGTGTTGTCCCCTCTGTCCACCAGGGTTCCACCTaGTCCTTCTGGACAGAGCCCCAGTGCTTCGTAAGT | + |
|
Preference number: 6 (lower is better) Translates to: VSVVPSVHQGST*SFWTEPQCFVS Trigger: ACTTACGAAGCACTGGGGCTCTGTCCAGAAGGACAAGGTGGAACCCTGGTGGACAGAGGGGACAACACTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS CAA 90 bp | CTTTCCTCCGTAAGTGTTGTCCCCTCTGTCCACCAGGGTTCCACCTaGTCCTTCTGGACAGAGCCCCAGTGCTTCGTAAGTGATGAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LSSVSVVPSVHQGST*SFWTEPQCFVSDEF Trigger: GAACTCATCACTTACGAAGCACTGGGGCTCTGTCCAGAAGGACAAGGTGGAACCCTGGTGGACAGAGGGGACAACACTTACGGAGGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS GCA 72 bp | CCCACTGGTGGAATCACCATACACATAGCCAACGCATaGCTGTTCCACTGCGGAGTAAGGGATCTGTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: PTGGITIHIANA*LFHCGVRDLCI Trigger: GATGCACAGATCCCTTACTCCGCAGTGGAACAGGCATGCGTTGGCTATGTGTATGGTGATTCCACCAGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000130776.2 |
||
| CDS CCA 72 bp | TCTTCAAACGTACTGGGTAAGTCAGTCATCATCTCCTaGGCCACAATCTCCACCGCTTTGGACTGCAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SSNVLGKSVIIS*ATISTALDCRP Trigger: CGGCCTGCAGTCCAAAGCGGTGGAGATTGTGGCCCAGGAGATGATGACTGACTTACCCAGTACGTTTGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000149106.8 |
||
| CDS TCA 72 bp | CTGGCCTGCTTCCTTTGCCATATCAGGATAGTCTCTTaGGTTCTCACCTCCAGGCTTCATGAACCACAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LACFLCHIRIVS*VLTSRLHEPQA Trigger: GGCCTGTGGTTCATGAAGCCTGGAGGTGAGAACTCAAGAGACTATCCTGATATGGCAAAGGAAGCAGGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130776.2 |
||
| CDS CCA 72 bp | AGAAGCAATCGTGAAGCTCTATCACGTCGACATCGTTaGGTGTCAGGCCGGACTTCTCATAGCATCTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RSNREALSRRHR*VSGRTSHSISW Trigger: CCAGGAGATGCTATGAGAAGTCCGGCCTGACACCCAACGATGTCGACGTGATAGAGCTTCACGATTGCTTCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS GCA 72 bp | CACACAATTTGCCAAGCCATACACATAGCCAACGCATaGCTGTTCCACTGCGGAGTAAGGGATCTGTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: HTICQAIHIANA*LFHCGVRDLCI Trigger: GATGCACAGATCCCTTACTCCGCAGTGGAACAGGCATGCGTTGGCTATGTGTATGGCTTGGCAAATTGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149106.8 |
||
| CDS GCA 72 bp | TTCAAGCTTCTTCTCAATCTCCTTAAAGACGAGGTTTaGCTTGAATCCATCCCCTGCAGAGCTGGTGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: FKLLLNLLKDEV*LESIPCRAGGS Trigger: GCTCCCACCAGCTCTGCAGGGGATGGATTCAAGGCAAACCTCGTCTTTAAGGAGATTGAGAAGAAGCTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000106701.2 |
||
| CDS CCA 72 bp | CGTTGGGTGTCAGGCCGGACTTCTCATAGCATCTCCTaGCAGCTTCTTTACTCATATCATAGCCAACCACTT | + |
|
Preference number: 6 (lower is better) Translates to: RWVSGRTSHSIS*QLLYSYHSQPL Trigger: AAGTGGTTGGCTATGATATGAGTAAAGAAGCTGCCAGGAGATGCTATGAGAAGTCCGGCCTGACACCCAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030340.15 |
||
| CDS TCA 72 bp | CTGGCCTGCTTCCTTTGCCATATCAGGATAGTCTCTTaGGTTCTCACCTCCAGGCTTCATGAACTTGGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: LACFLCHIRIVS*VLTSRLHELGH Trigger: ATGACCAAGTTCATGAAGCCTGGAGGTGAGAACTCAAGAGACTATCCTGATATGGCAAAGGAAGCAGGCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000149106.8 |
||
| CDS CAA 72 bp | TCTGTGCATCTTCCAATGCCTTCTGGCCTGCTTCCTTaGCCATATCAGGATAGTCTCTTGAGTTCTCACCTC | + |
|
Preference number: 6 (lower is better) Translates to: SVHLPMPSGLLP*PYQDSLLSSHL Trigger: GAGGTGAGAACTCAAGAGACTATCCTGATATGGCAAAGGAAGCAGGCCAGAAGGCATTGGAAGATGCACAGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030340.15 ENSMUST00000130776.2 ENSMUST00000149106.8 |
||
| CDS CAA 90 bp | AGACTTCAATATGTTTATCAGTTGGAGTGGTCCGATCTGAGAATTTaGTTCCAATGGATCCCCTCTCCATCTTCTCAAACCCAAGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RLQYVYQLEWSDLRI*FQWIPSPSSQTQEP Trigger: TGGCTCTTGGGTTTGAGAAGATGGAGAGGGGATCCATTGGAACAAAATTCTCAGATCGGACCACTCCAACTGATAAACATATTGAAGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000149106.8 |
||
| CDS GCA 72 bp | CCCAGCATACCCAAACATCTGAGGAGTAATCGGATGTaGAGACAATCCATACTTATCGATCAAGACTTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: PSIPKHLRSNRM*RQSILIDQDFN Trigger: ATTGAAGTCTTGATCGATAAGTATGGATTGTCTGCACATCCGATTACTCCTCAGATGTTTGGGTATGCTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000149106.8 |
||
| CDS CAA 90 bp | CAGACAATCCATACTTATCGATCAAGACTTCAATATGTTTATCAGTaGGAGTGGTCCGATCTGAGAATTTTGTTCCAATGGATCCCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: QTIHTYRSRLQYVYQ*EWSDLRILFQWIPS Trigger: AGAGGGGATCCATTGGAACAAAATTCTCAGATCGGACCACTCCAACTGATAAACATATTGAAGTCTTGATCGATAAGTATGGATTGTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000149106.8 |
||
| CDS CAA 72 bp | GCCATAAACAAAGCAGTCGAACCAGTAGAACAGTTATaGTTGACATTAATTATAGGAATGCCAGTCAGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: AINKAVEPVEQL*LTLIIGMPVSP Trigger: GGGACTGACTGGCATTCCTATAATTAATGTCAACAATAACTGTTCTACTGGTTCGACTGCTTTGTTTATGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000130776.2 |
||
| CDS CAA 72 bp | CATACTTATCGATCAAGACTTCAATATGTTTATCAGTaGGAGTGGTCCGATCTGAGAATTTTGTTCCAATGG | + |
|
Preference number: 6 (lower is better) Translates to: HTYRSRLQYVYQ*EWSDLRILFQW Trigger: CCATTGGAACAAAATTCTCAGATCGGACCACTCCAACTGATAAACATATTGAAGTCTTGATCGATAAGTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030340.15 ENSMUST00000149106.8 |
||