Pregenerated sensors for SCNN1G (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000216Ensembl transcript IDs: ENSMUST00000000221.6
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCCTCTCCAAACACGATCCCCAGGCTCTGGGCCAACTGTCTGTCTaGGGACACAGAGGACACCTTGTCCCAGTGTCAATGACTGAGGTC | + |
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Preference number: 1 (lower is better) Translates to: ALSKHDPQALGQLSV*GHRGHLVPVSMTEV Trigger: GACCTCAGTCATTGACACTGGGACAAGGTGTCCTCTGTGTCCTCAGACAGACAGTTGGCCCAGAGCCTGGGGATCGTGTTTGGAGAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| 3UTR CCA 90 bp | TGTCCTCTCTCTACTGTGCCCTCTCCAAACACGATCCCCAGGCTCTaGGCCAACTGTCTGTCTGAGGACACAGAGGACACCTTGTCCCAG | + |
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Preference number: 1 (lower is better) Translates to: CPLSTVPSPNTIPRL*ANCLSEDTEDTLSQ Trigger: CTGGGACAAGGTGTCCTCTGTGTCCTCAGACAGACAGTTGGCCCAGAGCCTGGGGATCGTGTTTGGAGAGGGCACAGTAGAGAGAGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| 3UTR CCA 90 bp | GATAGGAGTACCATTTGGCAGGAGTGTCCAGCTATGCCCTTTAACTaGCCCTTCTCTACTGCCCCACCCTGCTTCAGAGTGGGGACATCT | + |
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Preference number: 1 (lower is better) Translates to: DRSTIWQECPAMPFN*PFSTAPPCFRVGTS Trigger: AGATGTCCCCACTCTGAAGCAGGGTGGGGCAGTAGAGAAGGGCCAGTTAAAGGGCATAGCTGGACACTCCTGCCAAATGGTACTCCTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| 3UTR CCA 90 bp | GCTGGAAGTTATGAGTGTTGGGGCAGGGCCCATCAGGTCCTTCTGTaGATTTCCATGCCCTATCCTGTTCACAGCAGGCTGTTAGACATG | + |
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Preference number: 1 (lower is better) Translates to: AGSYECWGRAHQVLL*ISMPYPVHSRLLDM Trigger: CATGTCTAACAGCCTGCTGTGAACAGGATAGGGCATGGAAATCCACAGAAGGACCTGATGGGCCCTGCCCCAACACTCATAACTTCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| 3UTR TCA 90 bp | AACTGTCTGTCTGAGGACACAGAGGACACCTTGTCCCAGTGTCAATaGCTGAGGTCAGCAACCAACTGCTGGGATCCAAGGATGGTGCTA | + |
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Preference number: 1 (lower is better) Translates to: NCLSEDTEDTLSQCQ*LRSATNCWDPRMVL Trigger: TAGCACCATCCTTGGATCCCAGCAGTTGGTTGCTGACCTCAGTCATTGACACTGGGACAAGGTGTCCTCTGTGTCCTCAGACAGACAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| 3UTR-3UTR GCA 90 bp | GCTATGCCCTTTAACTGGCCCTTCTCTACTGCCCCACCCTGCTTCAGAGTGGGGGTCCTCTCTCTACTGTaGCCTCTCCAAACACGATCC | + |
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Preference number: 2 (lower is better) Translates to: AMPFNWPFSTAPPCFRVGVLSLL*PLQTRS Trigger: GGATCGTGTTTGGAGAGGGCACAGTAGAGAGAGGAC...CCCCACTCTGAAGCAGGGTGGGGCAGTAGAGAAGGGCCAGTTAAAGGGCATAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| 3UTR-3UTR GCA 90 bp | TCCCCAGGCTCTGGGCCAACTGTCTGTCTGAGGACACAGAGGACACCTTGTCCCTTCTGTGGATTTCCATaGCCTATCCTGTTCACAGCA | + |
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Preference number: 2 (lower is better) Translates to: SPGSGPTVCLRTQRTPCPFCGFP*PILFTA Trigger: TGCTGTGAACAGGATAGGGCATGGAAATCCACAGAA...GGGACAAGGTGTCCTCTGTGTCCTCAGACAGACAGTTGGCCCAGAGCCTGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| 3UTR-3UTR TCA 90 bp | GGGGCTCTGAAACACCATTCTCTTTCAGGACCCCAGGAAGAGCTCACTGTTGGCTTAGCTTATAAGTGCTaGGTCCAGGTTGCAGGATAT | + |
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Preference number: 2 (lower is better) Translates to: GALKHHSLSGPQEELTVGLAYKC*VQVAGY Trigger: ATATCCTGCAACCTGGACTCAGCACTTATAAGCTAA...GCCAACAGTGAGCTCTTCCTGGGGTCCTGAAAGAGAATGGTGTTTCAGAGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| 3UTR-3UTR TCA 90 bp | CAGTTCAAAGACAAAATAAAGGATTGGGCCTGTAGGCTGGTGTTTGTTATGCCCGGCCAACTGTCTGTCTaGGGACACAGAGGACACCTT | + |
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Preference number: 2 (lower is better) Translates to: QFKDKIKDWACRLVFVMPGQLSV*GHRGHL Trigger: AAGGTGTCCTCTGTGTCCTCAGACAGACAGTTGGCC...GGGCATAACAAACACCAGCCTACAGGCCCAATCCTTTATTTTGTCTTTGAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| 3UTR-3UTR TCA 90 bp | TCTCAGTTCAAAGACAAAATAAAGGATTGGGCCTGTAGGCTGGTGTTTGTTATGCTGAGCTTGGGGCTCTaGAACACCATTCTCTTTCAG | + |
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Preference number: 2 (lower is better) Translates to: SQFKDKIKDWACRLVFVMLSLGL*NTILFQ Trigger: CTGAAAGAGAATGGTGTTTCAGAGCCCCAAGCTCAG...CATAACAAACACCAGCCTACAGGCCCAATCCTTTATTTTGTCTTTGAACTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| 3UTR GCA 72 bp | GGACATCTTACCACACCCCTTGTCCTCTCTCTACTGTaGCCTCTCCAAACACGATCCCCAGGCTCTGGGCCA | + |
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Preference number: 3 (lower is better) Translates to: GHLTTPLVLSLL*PLQTRSPGSGP Trigger: TGGCCCAGAGCCTGGGGATCGTGTTTGGAGAGGGCACAGTAGAGAGAGGACAAGGGGTGTGGTAAGATGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| 3UTR CCA 72 bp | TCTACTGTGCCCTCTCCAAACACGATCCCCAGGCTCTaGGCCAACTGTCTGTCTGAGGACACAGAGGACACC | + |
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Preference number: 3 (lower is better) Translates to: STVPSPNTIPRL*ANCLSEDTEDT Trigger: GGTGTCCTCTGTGTCCTCAGACAGACAGTTGGCCCAGAGCCTGGGGATCGTGTTTGGAGAGGGCACAGTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| 3UTR CCA 72 bp | ACTGGCCCTTCTCTACTGCCCCACCCTGCTTCAGAGTaGGGACATCTTACCACACCCCTTGTCCTCTCTCTA | + |
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Preference number: 3 (lower is better) Translates to: TGPSLLPHPASE*GHLTTPLVLSL Trigger: TAGAGAGAGGACAAGGGGTGTGGTAAGATGTCCCCACTCTGAAGCAGGGTGGGGCAGTAGAGAAGGGCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| 3UTR-3UTR CAA 90 bp | ATCCCCAGGCTCTGGGCCAACTGTCTGTCTGAGGACACAGAGGACACCTTGTCCAGTGCTGAGTCCAGGTaGCAGGATATAGCTCATGCT | + |
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Preference number: 3 (lower is better) Translates to: IPRLWANCLSEDTEDTLSSAESR*QDIAHA Trigger: AGCATGAGCTATATCCTGCAACCTGGACTCAGCACT...GGACAAGGTGTCCTCTGTGTCCTCAGACAGACAGTTGGCCCAGAGCCTGGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| 3UTR-3UTR CAA 90 bp | ATCCCCAGGCTCTGGGCCAACTGTCTGTCTGAGGACACAGAGGACACCTTGTCCAGGAAGAGCTCACTGTaGGCCCAGGTCATTCATTAC | + |
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Preference number: 3 (lower is better) Translates to: IPRLWANCLSEDTEDTLSRKSSL*AQVIHY Trigger: GTAATGAATGACCTGGGCCAACAGTGAGCTCTTCCT...GGACAAGGTGTCCTCTGTGTCCTCAGACAGACAGTTGGCCCAGAGCCTGGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| 3UTR CCA 72 bp | TATGAGTGTTGGGGCAGGGCCCATCAGGTCCTTCTGTaGATTTCCATGCCCTATCCTGTTCACAGCAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: YECWGRAHQVLL*ISMPYPVHSRL Trigger: CAGCCTGCTGTGAACAGGATAGGGCATGGAAATCCACAGAAGGACCTGATGGGCCCTGCCCCAACACTCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| 3UTR TCA 72 bp | GTCCAGGTTGCAGGATATAGCTCATGCTGGAAGTTATaGGTGTTGGGGCAGGGCCCATCAGGTCCTTCTGTG | + |
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Preference number: 3 (lower is better) Translates to: VQVAGYSSCWKL*VLGQGPSGPSV Trigger: CACAGAAGGACCTGATGGGCCCTGCCCCAACACTCATAACTTCCAGCATGAGCTATATCCTGCAACCTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| 3UTR TCA 72 bp | CAGGTTATTGTGGGCAAACTCCTGAGCTTGGGGCTCTaGAACACCATTCTCTTTCAGGACCCCAGGAAGAGC | + |
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Preference number: 3 (lower is better) Translates to: QVIVGKLLSLGL*NTILFQDPRKS Trigger: GCTCTTCCTGGGGTCCTGAAAGAGAATGGTGTTTCAGAGCCCCAAGCTCAGGAGTTTGCCCACAATAACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| 3UTR TCA 72 bp | GGTACAAGCTGGGCCAGGTTATTGTGGGCAAACTCCTaGGCTTGGGGCTCTGAAACACCATTCTCTTTCAGG | + |
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Preference number: 3 (lower is better) Translates to: GTSWARLLWANS*AWGSETPFSFR Trigger: CCTGAAAGAGAATGGTGTTTCAGAGCCCCAAGCTCAGGAGTTTGCCCACAATAACCTGGCCCAGCTTGTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| 3UTR TCA 72 bp | ATAGCTGGCCAGCCTTGCTACCCAAGATCATGTGCTTaGGGTACAAGCTGGGCCAGGTTATTGTGGGCAAAC | + |
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Preference number: 3 (lower is better) Translates to: IAGQPCYPRSCA*GTSWARLLWAN Trigger: GTTTGCCCACAATAACCTGGCCCAGCTTGTACCTCAAGCACATGATCTTGGGTAGCAAGGCTGGCCAGCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| 3UTR-3UTR CAA 90 bp | CAGTTCAAAGACAAAATAAAGGATTGGGCCTGTAGGCTGGTGTTTGTTATGCCCATCTTACCACACCCCTaGTCCTCTCTCTACTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: QFKDKIKDWACRLVFVMPILPHP*SSLYCA Trigger: GGCACAGTAGAGAGAGGACAAGGGGTGTGGTAAGAT...GGGCATAACAAACACCAGCCTACAGGCCCAATCCTTTATTTTGTCTTTGAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| 3UTR TCA 72 bp | TCATTCATTACCTTTGGCTCTTTAGCTTATAAGTGCTaGGTCCAGGTTGCAGGATATAGCTCATGCTGGAAG | + |
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Preference number: 3 (lower is better) Translates to: SFITFGSLAYKC*VQVAGYSSCWK Trigger: CTTCCAGCATGAGCTATATCCTGCAACCTGGACTCAGCACTTATAAGCTAAAGAGCCAAAGGTAATGAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR GCA 90 bp | ATCCCCAGGCTCTGGGCCAACTGTCTGTCTGAGGACACAGAGGACACCTTGTCCCTCGGGACACCACGATaGGCCGGCAGCCGTGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: IPRLWANCLSEDTEDTLSLGTPR*AGSRGC Trigger: ACACCCACGGCTGCCGGCGCATCGTGGTGTCCCGAG...GGACAAGGTGTCCTCTGTGTCCTCAGACAGACAGTTGGCCCAGAGCCTGGGGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR TCA 90 bp | TCCCCAGGCTCTGGGCCAACTGTCTGTCTGAGGACACAGAGGACACCTTGTCCCGCTGGAGGTAGAGGCTaGCTGTACTGGGCACAGCCA | + |
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Preference number: 4 (lower is better) Translates to: SPGSGPTVCLRTQRTPCPAGGRG*LYWAQP Trigger: TGGCTGTGCCCAGTACAGTCAGCCTCTACCTCCAGC...GGGACAAGGTGTCCTCTGTGTCCTCAGACAGACAGTTGGCCCAGAGCCTGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR CCA 90 bp | GCTATGCCCTTTAACTGGCCCTTCTCTACTGCCCCACCCTGCTTCAGAGTGGGGCCTGACCCTGCTGGCTaGAGGGAGTCTCAGTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: AMPFNWPFSTAPPCFRVGPDPAG*RESQWR Trigger: CCTCCACTGAGACTCCCTCCAGCCAGCAGGGTCAGG...CCCCACTCTGAAGCAGGGTGGGGCAGTAGAGAAGGGCCAGTTAAAGGGCATAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR TCA 90 bp | TCCCCAGGCTCTGGGCCAACTGTCTGTCTGAGGACACAGAGGACACCTTGTCCCCTTGGCTCCAGTGGATaGCACCAGGAAGGGGTTGTA | + |
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Preference number: 4 (lower is better) Translates to: SPGSGPTVCLRTQRTPCPLGSSG*HQEGVV Trigger: TACAACCCCTTCCTGGTGTCATCCACTGGAGCCAAG...GGGACAAGGTGTCCTCTGTGTCCTCAGACAGACAGTTGGCCCAGAGCCTGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR GCA 90 bp | ATCCCCAGGCTCTGGGCCAACTGTCTGTCTGAGGACACAGAGGACACCTTGTCCACGAGGAGGGCGCACTaGCAGATAATGAGGGCCACT | + |
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Preference number: 4 (lower is better) Translates to: IPRLWANCLSEDTEDTLSTRRAH*QIMRAT Trigger: AGTGGCCCTCATTATCTGGCAGTGCGCCCTCCTCGT...GGACAAGGTGTCCTCTGTGTCCTCAGACAGACAGTTGGCCCAGAGCCTGGGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR CCA 90 bp | GGGGCTCTGAAACACCATTCTCTTTCAGGACCCCAGGAAGAGCTCACTGTTGGCGGGCCCACCAATCCTTaGCTTTCTGCCACTGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: GALKHHSLSGPQEELTVGGPTNP*LSATGG Trigger: GCCGCCAGTGGCAGAAAGCCAAGGATTGGTGGGCCC...GCCAACAGTGAGCTCTTCCTGGGGTCCTGAAAGAGAATGGTGTTTCAGAGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR TCA 90 bp | TCCCCAGGCTCTGGGCCAACTGTCTGTCTGAGGACACAGAGGACACCTTGTCCCTGGCTGGGCTCTCCATaGTGGATCTTTGGTTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SPGSGPTVCLRTQRTPCPWLGSP*WIFGSG Trigger: ACCTGAACCAAAGATCCATCATGGAGAGCCCAGCCA...GGGACAAGGTGTCCTCTGTGTCCTCAGACAGACAGTTGGCCCAGAGCCTGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR CCA 90 bp | GCTATGCCCTTTAACTGGCCCTTCTCTACTGCCCCACCCTGCTTCAGAGTGGGGTGCTTGCACACTGATTaGCAGCCCAGTTCTTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: AMPFNWPFSTAPPCFRVGCLHTD*QPSSSR Trigger: CCGGGAAGAACTGGGCTGCCAATCAGTGTGCAAGCA...CCCCACTCTGAAGCAGGGTGGGGCAGTAGAGAAGGGCCAGTTAAAGGGCATAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR CCA 90 bp | TCAGCAACCAACTGCTGGGATCCAAGGATGGTGCTAATTTCTTCTGTCACACCCCGGAGCCTCCGGGGCTaGAGGCAGGCGCATAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: SATNCWDPRMVLISSVTPRSLRG*RQAHSR Trigger: TCTGCTATGCGCCTGCCTCCAGCCCCGGAGGCTCCG...GGGTGTGACAGAAGAAATTAGCACCATCCTTGGATCCCAGCAGTTGGTTGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR TCA 90 bp | ATCCCCAGGCTCTGGGCCAACTGTCTGTCTGAGGACACAGAGGACACCTTGTCCTCAACTGAGTGTCTGTaGGCTGGGAGGAAAAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: IPRLWANCLSEDTEDTLSSTECL*AGRKRH Trigger: GTGCCTTTTCCTCCCAGCTCACAGACACTCAGTTGA...GGACAAGGTGTCCTCTGTGTCCTCAGACAGACAGTTGGCCCAGAGCCTGGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR GCA 90 bp | TCCCCAGGCTCTGGGCCAACTGTCTGTCTGAGGACACAGAGGACACCTTGTCCCGGTGTTGCTGGTAGTTaGAGTAATTGGCTGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: SPGSGPTVCLRTQRTPCPGVAGS*SNWLLE Trigger: CTCCAGCAGCCAATTACTGCAACTACCAGCAACACC...GGGACAAGGTGTCCTCTGTGTCCTCAGACAGACAGTTGGCCCAGAGCCTGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR TCA 90 bp | GGACACAGAGGACACCTTGTCCCAGTGTCAATGACTGAGGTCAGCAACCAACTGTCCGCTTCCGACCAGTaGAGAAGTCCCTGGCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: GHRGHLVPVSMTEVSNQLSASDQ*RSPWPF Trigger: GAAAGGCCAGGGACTTCTTCACTGGTCGGAAGCGGA...CAGTTGGTTGCTGACCTCAGTCATTGACACTGGGACAAGGTGTCCTCTGTGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR TCA 90 bp | GGACACAGAGGACACCTTGTCCCAGTGTCAATGACTGAGGTCAGCAACCAACTGCTCCCATGGAGGTGCTaGGGATGGTGGCGTTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: GHRGHLVPVSMTEVSNQLLPWRC*GWWRFL Trigger: GAGAAAACGCCACCATCCTCAGCACCTCCATGGGAG...CAGTTGGTTGCTGACCTCAGTCATTGACACTGGGACAAGGTGTCCTCTGTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR CCA 90 bp | CAGCTATGCCCTTTAACTGGCCCTTCTCTACTGCCCCACCCTGCTTCAGAGTGGGTTGAGAAATCTGGGTaGTGTGCCTTCCCACGTGGA | + |
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Preference number: 4 (lower is better) Translates to: QLCPLTGPSLLPHPASEWVEKSG*CAFPRG Trigger: TCCACGTGGGAAGGCACACCACCCAGATTTCTCAAC...CCACTCTGAAGCAGGGTGGGGCAGTAGAGAAGGGCCAGTTAAAGGGCATAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR CCA 90 bp | GGGGCTCTGAAACACCATTCTCTTTCAGGACCCCAGGAAGAGCTCACTGTTGGCGCCACTGTGCCAAGCTaGTGGTCAGTGTCCATTCCT | + |
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Preference number: 4 (lower is better) Translates to: GALKHHSLSGPQEELTVGATVPS*WSVSIP Trigger: AGGAATGGACACTGACCACCAGCTTGGCACAGTGGC...GCCAACAGTGAGCTCTTCCTGGGGTCCTGAAAGAGAATGGTGTTTCAGAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR CCA 90 bp | GGCTCTGAAACACCATTCTCTTTCAGGACCCCAGGAAGAGCTCACTGTTGGCCCGTCCGTATCCAGGGCTaGATTATCCTGACCCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: GSETPFSFRTPGRAHCWPVRIQG*IILTLL Trigger: CAGCAGGGTCAGGATAATCCAGCCCTGGATACGGAC...GGGCCAACAGTGAGCTCTTCCTGGGGTCCTGAAAGAGAATGGTGTTTCAGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR TCA 90 bp | ACCCCAGGAAGAGCTCACTGTTGGCCCAGGTCATTCATTACCTTTGGCTCTTTAAGGGCTGGATTATCCTaGCCCTGCTGGCTGGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: TPGRAHCWPRSFITFGSLRAGLS*PCWLEG Trigger: TCCCTCCAGCCAGCAGGGTCAGGATAATCCAGCCCT...TAAAGAGCCAAAGGTAATGAATGACCTGGGCCAACAGTGAGCTCTTCCTGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR CCA 90 bp | GCTATGCCCTTTAACTGGCCCTTCTCTACTGCCCCACCCTGCTTCAGAGTGGGGCTCAATACTGTTGGCTaGGCTCTCCATGATGGATCT | + |
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Preference number: 4 (lower is better) Translates to: AMPFNWPFSTAPPCFRVGLNTVG*ALHDGS Trigger: AGATCCATCATGGAGAGCCCAGCCAACAGTATTGAG...CCCCACTCTGAAGCAGGGTGGGGCAGTAGAGAAGGGCCAGTTAAAGGGCATAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR CCA 90 bp | TCAGCAACCAACTGCTGGGATCCAAGGATGGTGCTAATTTCTTCTGTCACACCCTGGAGGGAGTCTCAGTaGAGGGTGGTGTCCGCCTAC | + |
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Preference number: 4 (lower is better) Translates to: SATNCWDPRMVLISSVTPWRESQ*RVVSAY Trigger: GTAGGCGGACACCACCCTCCACTGAGACTCCCTCCA...GGGTGTGACAGAAGAAATTAGCACCATCCTTGGATCCCAGCAGTTGGTTGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| 3UTR CAA 72 bp | ACCCTGCTTCAGAGTGGGGACATCTTACCACACCCCTaGTCCTCTCTCTACTGTGCCCTCTCCAAACACGAT | + |
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Preference number: 4 (lower is better) Translates to: TLLQSGDILPHP*SSLYCALSKHD Trigger: ATCGTGTTTGGAGAGGGCACAGTAGAGAGAGGACAAGGGGTGTGGTAAGATGTCCCCACTCTGAAGCAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR CCA 90 bp | ATCCCCAGGCTCTGGGCCAACTGTCTGTCTGAGGACACAGAGGACACCTTGTCCTCCAGTTTCTGGAAGTaGACTTTGATGGAGACAGAG | + |
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Preference number: 4 (lower is better) Translates to: IPRLWANCLSEDTEDTLSSSFWK*TLMETE Trigger: CTCTGTCTCCATCAAAGTCCACTTCCAGAAACTGGA...GGACAAGGTGTCCTCTGTGTCCTCAGACAGACAGTTGGCCCAGAGCCTGGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR CCA 90 bp | GGGGCTCTGAAACACCATTCTCTTTCAGGACCCCAGGAAGAGCTCACTGTTGGCGGTAGTTGCAGTAATTaGCTGCTGGAGGTAGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: GALKHHSLSGPQEELTVGGSCSN*LLEVEA Trigger: AGCCTCTACCTCCAGCAGCCAATTACTGCAACTACC...GCCAACAGTGAGCTCTTCCTGGGGTCCTGAAAGAGAATGGTGTTTCAGAGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| 3UTR CAA 72 bp | CTTCTGTCACACCCATCAGGCAATAGCTGGCCAGCCTaGCTACCCAAGATCATGTGCTTGAGGTACAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: LLSHPSGNSWPA*LPKIMCLRYKL Trigger: CAGCTTGTACCTCAAGCACATGATCTTGGGTAGCAAGGCTGGCCAGCTATTGCCTGATGGGTGTGACAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR TCA 90 bp | CAGCTATGCCCTTTAACTGGCCCTTCTCTACTGCCCCACCCTGCTTCAGAGTGGTGTCTAGAACATCTTTaGCCCCATACAAGGACAGCA | + |
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Preference number: 4 (lower is better) Translates to: QLCPLTGPSLLPHPASEWCLEHL*PHTRTA Trigger: TGCTGTCCTTGTATGGGGTCAAAGATGTTCTAGACA...CCACTCTGAAGCAGGGTGGGGCAGTAGAGAAGGGCCAGTTAAAGGGCATAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR GCA 90 bp | TCCCCAGGCTCTGGGCCAACTGTCTGTCTGAGGACACAGAGGACACCTTGTCCCATGTATAAGATGACTTaGAGACCATACTCACTGCCT | + |
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Preference number: 4 (lower is better) Translates to: SPGSGPTVCLRTQRTPCPMYKMT*RPYSLP Trigger: AGGCAGTGAGTATGGTCTGCAAGTCATCTTATACAT...GGGACAAGGTGTCCTCTGTGTCCTCAGACAGACAGTTGGCCCAGAGCCTGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR CCA 90 bp | TCCCCAGGCTCTGGGCCAACTGTCTGTCTGAGGACACAGAGGACACCTTGTCCCTTCCCATACATTGGATaGTGGAAAAGAGTGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SPGSGPTVCLRTQRTPCPFPYIG*WKRVKF Trigger: GAACTTCACTCTTTTCCACCATCCAATGTATGGGAA...GGGACAAGGTGTCCTCTGTGTCCTCAGACAGACAGTTGGCCCAGAGCCTGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
||
| CDS-3UTR CCA 90 bp | TCAGCAACCAACTGCTGGGATCCAAGGATGGTGCTAATTTCTTCTGTCACACCCCTCAGAAGCCTCAGATaGCCACTGTGCCAAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SATNCWDPRMVLISSVTPLRSLR*PLCQAG Trigger: ACCAGCTTGGCACAGTGGCCATCTGAGGCTTCTGAG...GGGTGTGACAGAAGAAATTAGCACCATCCTTGGATCCCAGCAGTTGGTTGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR TCA 90 bp | GGACACAGAGGACACCTTGTCCCAGTGTCAATGACTGAGGTCAGCAACCAACTGGTCAGAGGTGTCATTTaGGCACAACTGAAATCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GHRGHLVPVSMTEVSNQLVRGVI*AQLKSH Trigger: GTGGGATTTCAGTTGTGCTCAAATGACACCTCTGAC...CAGTTGGTTGCTGACCTCAGTCATTGACACTGGGACAAGGTGTCCTCTGTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
||
| CDS-3UTR TCA 90 bp | CCTGAGCTTGGGGCTCTGAAACACCATTCTCTTTCAGGACCCCAGGAAGAGCTCGAGGCACCTGTGCCATaGTATTCATGTAGTGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PELGALKHHSLSGPQEELEAPVP*YSCSEV Trigger: AACTTCACTACATGAATATCATGGCACAGGTGCCTC...GAGCTCTTCCTGGGGTCCTGAAAGAGAATGGTGTTTCAGAGCCCCAAGCTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
||
| CDS-3UTR TCA 90 bp | GCTATGCCCTTTAACTGGCCCTTCTCTACTGCCCCACCCTGCTTCAGAGTGGGGCCAGGTCAGTCTTGTTaGGCTTTTTGTTTATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AMPFNWPFSTAPPCFRVGPGQSC*AFCLFA Trigger: AGCAAATAAACAAAAAGCTCAACAAGACTGACCTGG...CCCCACTCTGAAGCAGGGTGGGGCAGTAGAGAAGGGCCAGTTAAAGGGCATAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
||
| CDS-3UTR CCA 90 bp | GGGGCTCTGAAACACCATTCTCTTTCAGGACCCCAGGAAGAGCTCACTGTTGGCGCATTCCTATGGAAGTaGACATTGCTGTCTCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: GALKHHSLSGPQEELTVGAFLWK*TLLSRS Trigger: AGATCGAGACAGCAATGTCCACTTCCATAGGAATGC...GCCAACAGTGAGCTCTTCCTGGGGTCCTGAAAGAGAATGGTGTTTCAGAGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR CCA 90 bp | CAGCTATGCCCTTTAACTGGCCCTTCTCTACTGCCCCACCCTGCTTCAGAGTGGTTTATTTGCTGGCTTTaGTCCCAGGTGAGAACATTC | + |
|
Preference number: 4 (lower is better) Translates to: QLCPLTGPSLLPHPASEWFICWL*SQVRTF Trigger: GAATGTTCTCACCTGGGACCAAAGCCAGCAAATAAA...CCACTCTGAAGCAGGGTGGGGCAGTAGAGAAGGGCCAGTTAAAGGGCATAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
||
| CDS-3UTR CCA 90 bp | ACCACTCGAGCTGAGATTAGGATAGGAGTACCATTTGGCAGGAGTGTCCAGCTATTGGCTTTCTGCCACTaGCGGCGGGCAATAATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TTRAEIRIGVPFGRSVQLLAFCH*RRAIIE Trigger: CTCTATTATTGCCCGCCGCCAGTGGCAGAAAGCCAA...TAGCTGGACACTCCTGCCAAATGGTACTCCTATCCTAATCTCAGCTCGAGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
||
| CDS-3UTR CCA 90 bp | AGCAACCAACTGCTGGGATCCAAGGATGGTGCTAATTTCTTCTGTCACACCCATGCAAGGTATTGTATCTaGGGGGTGGTGTGCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SNQLLGSKDGANFFCHTHARYCI*GVVCQA Trigger: TGCCTGGCACACCACCCCCCAGATACAATACCTTGC...ATGGGTGTGACAGAAGAAATTAGCACCATCCTTGGATCCCAGCAGTTGGTTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
||
| CDS-3UTR TCA 90 bp | ACCCCAGGAAGAGCTCACTGTTGGCCCAGGTCATTCATTACCTTTGGCTCTTTAAACTCATTGGTCAACTaGGTGTCTGTGAGCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TPGRAHCWPRSFITFGSLNSLVN*VSVSWE Trigger: CTCCCAGCTCACAGACACTCAGTTGACCAATGAGTT...TAAAGAGCCAAAGGTAATGAATGACCTGGGCCAACAGTGAGCTCTTCCTGGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
||
| CDS-3UTR CCA 90 bp | CCTGAGCTTGGGGCTCTGAAACACCATTCTCTTTCAGGACCCCAGGAAGAGCTCCCATACATTGGATGGTaGAAAAGAGTGAAGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PELGALKHHSLSGPQEELPYIGW*KRVKFL Trigger: CAGGAACTTCACTCTTTTCCACCATCCAATGTATGG...GAGCTCTTCCTGGGGTCCTGAAAGAGAATGGTGTTTCAGAGCCCCAAGCTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
||
| 3UTR CAA 72 bp | ACCATTCTCTTTCAGGACCCCAGGAAGAGCTCACTGTaGGCCCAGGTCATTCATTACCTTTGGCTCTTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: TILFQDPRKSSL*AQVIHYLWLFS Trigger: GCTAAAGAGCCAAAGGTAATGAATGACCTGGGCCAACAGTGAGCTCTTCCTGGGGTCCTGAAAGAGAATGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
||
| CDS-3UTR TCA 90 bp | CCTGAGCTTGGGGCTCTGAAACACCATTCTCTTTCAGGACCCCAGGAAGAGCTCCGTTTATGTATAAGATaGCTTGCAGACCATACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PELGALKHHSLSGPQEELRLCIR*LADHTH Trigger: GTGAGTATGGTCTGCAAGTCATCTTATACATAAACG...GAGCTCTTCCTGGGGTCCTGAAAGAGAATGGTGTTTCAGAGCCCCAAGCTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR GCA 90 bp | AGAGCTCACTGTTGGCCCAGGTCATTCATTACCTTTGGCTCTTTAGCTTATAAGCAATCCTTGGCTTTCTaGCACTGGCGGCGGGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: RAHCWPRSFITFGSLAYKQSLAF*HWRRAI Trigger: TATTGCCCGCCGCCAGTGGCAGAAAGCCAAGGATTG...CTTATAAGCTAAAGAGCCAAAGGTAATGAATGACCTGGGCCAACAGTGAGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR CCA 90 bp | AGGATAGGAGGACCATTTGTGTCAGGAAGAGAGTCTCCTCAAACCATGACTGTTGATGGACAAGCACCTTaGCTCCAGTGGATGACACCA | + |
|
Preference number: 4 (lower is better) Translates to: RIGGPFVSGRESPQTMTVDGQAP*LQWMTP Trigger: TGGTGTCATCCACTGGAGCCAAGGTGCTTGTCCATC...AACAGTCATGGTTTGAGGAGACTCTCTTCCTGACACAAATGGTCCTCCTATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR TCA 90 bp | ACCCCAGGAAGAGCTCACTGTTGGCCCAGGTCATTCATTACCTTTGGCTCTTTACCTTCTCGTTCTCATTaGAGACCAACAATGGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: TPGRAHCWPRSFITFGSLPSRSH*RPTMGS Trigger: TGATCCCATTGTTGGTCTTCAATGAGAACGAGAAGG...TAAAGAGCCAAAGGTAATGAATGACCTGGGCCAACAGTGAGCTCTTCCTGGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR TCA 90 bp | AGAGCTCACTGTTGGCCCAGGTCATTCATTACCTTTGGCTCTTTAGCTTATAAGGATGGCATTGATTCCTaGGCTGAAGGTGTAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RAHCWPRSFITFGSLAYKDGIDS*AEGVGG Trigger: GCCACCTACACCTTCAGCTCAGGAATCAATGCCATC...CTTATAAGCTAAAGAGCCAAAGGTAATGAATGACCTGGGCCAACAGTGAGCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
||
| CDS-3UTR TCA 90 bp | ACCCCAGGAAGAGCTCACTGTTGGCCCAGGTCATTCATTACCTTTGGCTCTTTACGTTTTCTCTGTTGTTaGACGTGTAGCAGTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TPGRAHCWPRSFITFGSLRFLCC*TCSSSH Trigger: ATGGGAACTGCTACACGTTCAACAACAGAGAAAACG...TAAAGAGCCAAAGGTAATGAATGACCTGGGCCAACAGTGAGCTCTTCCTGGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
||
| CDS-3UTR GCA 90 bp | AGGATAGGAGGACCATTTGTGTCAGGAAGAGAGTCTCCTCAAACCATGACTGTTTATGGAAGTGGACATTaGTGTCTCGATCTCGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RIGGPFVSGRESPQTMTVYGSGH*CLDLGP Trigger: GGGACCGAGATCGAGACAGCAATGTCCACTTCCATA...AACAGTCATGGTTTGAGGAGACTCTCTTCCTGACACAAATGGTCCTCCTATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR TCA 90 bp | AGAGCTCACTGTTGGCCCAGGTCATTCATTACCTTTGGCTCTTTAGCTTATAAGAAGGTTCGCTCAGCTTaGAGGATTCTGTCAGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RAHCWPRSFITFGSLAYKKVRSA*RILSGA Trigger: TGCACCTGACAGAATCCTTCAAGCTGAGCGAACCTT...CTTATAAGCTAAAGAGCCAAAGGTAATGAATGACCTGGGCCAACAGTGAGCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR CCA 90 bp | AGCAACCAACTGCTGGGATCCAAGGATGGTGCTAATTTCTTCTGTCACACCCATAGTTTGTACCACTCCTaGATGGCATTGATTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SNQLLGSKDGANFFCHTHSLYHS*MALIPE Trigger: CTCAGGAATCAATGCCATCCAGGAGTGGTACAAACT...ATGGGTGTGACAGAAGAAATTAGCACCATCCTTGGATCCCAGCAGTTGGTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
||
| CDS-3UTR CCA 90 bp | AGCAACCAACTGCTGGGATCCAAGGATGGTGCTAATTTCTTCTGTCACACCCATTCAGGTGCATTCCTATaGAAGTGGACATTGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SNQLLGSKDGANFFCHTHSGAFL*KWTLLS Trigger: AGACAGCAATGTCCACTTCCATAGGAATGCACCTGA...ATGGGTGTGACAGAAGAAATTAGCACCATCCTTGGATCCCAGCAGTTGGTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR TCA 90 bp | TCTCAGTTCAAAGACAAAATAAAGGATTGGGCCTGTAGGCTGGTGTTTGTTATGTCTGGAAGTGGACTTTaGTGGAGACAGAGACGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SQFKDKIKDWACRLVFVMSGSGL*WRQRRC Trigger: ACACCGTCTCTGTCTCCATCAAAGTCCACTTCCAGA...CATAACAAACACCAGCCTACAGGCCCAATCCTTTATTTTGTCTTTGAACTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR GCA 90 bp | AGAGCTCACTGTTGGCCCAGGTCATTCATTACCTTTGGCTCTTTAGCTTATAAGAAGGATTCTGTCAGGTaGATTCCTATGGAAGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RAHCWPRSFITFGSLAYKKDSVR*IPMEVD Trigger: GTCCACTTCCATAGGAATGCACCTGACAGAATCCTT...CTTATAAGCTAAAGAGCCAAAGGTAATGAATGACCTGGGCCAACAGTGAGCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR CCA 90 bp | AGGATAGGAGGACCATTTGTGTCAGGAAGAGAGTCTCCTCAAACCATGACTGTTGCAGTTCCCATACATTaGATGGTGGAAAAGAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RIGGPFVSGRESPQTMTVAVPIH*MVEKSE Trigger: TTCACTCTTTTCCACCATCCAATGTATGGGAACTGC...AACAGTCATGGTTTGAGGAGACTCTCTTCCTGACACAAATGGTCCTCCTATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR CCA 90 bp | CCATTTGTGTCAGGAAGAGAGTCTCCTCAAACCATGACTGTTTTCCAATCCTATCTGGGGGCCTCGAACTaGCAGATTCTTTTTGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: PFVSGRESPQTMTVFQSYLGASN*QILFDF Trigger: AAAATCAAAAAGAATCTGCCAGTTCGAGGCCCCCAG...ATAGGATTGGAAAACAGTCATGGTTTGAGGAGACTCTCTTCCTGACACAAATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR CCA 90 bp | TCTCAGTTCAAAGACAAAATAAAGGATTGGGCCTGTAGGCTGGTGTTTGTTATGAGCAATACATCCAGTTaGGGTGTTGCTGGTAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SQFKDKIKDWACRLVFVMSNTSS*GVAGSC Trigger: GCAACTACCAGCAACACCCCAACTGGATGTATTGCT...CATAACAAACACCAGCCTACAGGCCCAATCCTTTATTTTGTCTTTGAACTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR TCA 90 bp | CCATTTGTGTCAGGAAGAGAGTCTCCTCAAACCATGACTGTTTTCCAATCCTATTCATTTGAGCACAACTaGAATCCCACCAGTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PFVSGRESPQTMTVFQSYSFEHN*NPTSFF Trigger: GAAGAAACTGGTGGGATTTCAGTTGTGCTCAAATGA...ATAGGATTGGAAAACAGTCATGGTTTGAGGAGACTCTCTTCCTGACACAAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR CCA 90 bp | AGAGCTCACTGTTGGCCCAGGTCATTCATTACCTTTGGCTCTTTAGCTTATAAGTTTTTGTTTATTTGCTaGCTTTGGTCCCAGGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RAHCWPRSFITFGSLAYKFLFIC*LWSQVR Trigger: TCTCACCTGGGACCAAAGCCAGCAAATAAACAAAAA...CTTATAAGCTAAAGAGCCAAAGGTAATGAATGACCTGGGCCAACAGTGAGCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR TCA 90 bp | CCATTTGTGTCAGGAAGAGAGTCTCCTCAAACCATGACTGTTTTCCAATCCTATCAGAATAGCTCATGTTaGTTTTCTTCTCTAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PFVSGRESPQTMTVFQSYQNSSC*FSSLEA Trigger: TGCCTCTAGAGAAGAAAATCAACATGAGCTATTCTG...ATAGGATTGGAAAACAGTCATGGTTTGAGGAGACTCTCTTCCTGACACAAATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS CCA 90 bp | GATCATCGTCCGTATCCAGGGCTGGATTATCCTGACCCTGCTGGCTaGAGGGAGTCTCAGTGGAGGGTGGTGTCCGCCTACGGGCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: DHRPYPGLDYPDPAG*RESQWRVVSAYGPT Trigger: GGTGGGCCCGTAGGCGGACACCACCCTCCACTGAGACTCCCTCCAGCCAGCAGGGTCAGGATAATCCAGCCCTGGATACGGACGATGATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS CCA 90 bp | CCAGGGCTGGATTATCCTGACCCTGCTGGCTGGAGGGAGTCTCAGTaGAGGGTGGTGTCCGCCTACGGGCCCACCAATCCTTGGCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PGLDYPDPAGWRESQ*RVVSAYGPTNPWLS Trigger: AGAAAGCCAAGGATTGGTGGGCCCGTAGGCGGACACCACCCTCCACTGAGACTCCCTCCAGCCAGCAGGGTCAGGATAATCCAGCCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR CAA 90 bp | GCTATGCCCTTTAACTGGCCCTTCTCTACTGCCCCACCCTGCTTCAGAGTGGGGCGGGCCCACCAATCCTaGGCTTTCTGCCACTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: AMPFNWPFSTAPPCFRVGRAHQS*AFCHWR Trigger: CCGCCAGTGGCAGAAAGCCAAGGATTGGTGGGCCCG...CCCCACTCTGAAGCAGGGTGGGGCAGTAGAGAAGGGCCAGTTAAAGGGCATAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS GCA 90 bp | GAAAGAGAAGACGAGGAGGGCGCACTGCCAGATAATGAGGGCCACTaGTGTCAGCGTGAACGCAATCCACAACAGGCGCCGAAGGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EREDEEGALPDNEGH*CQRERNPQQAPKAA Trigger: GGCCGCCTTCGGCGCCTGTTGTGGATTGCGTTCACGCTGACAGCAGTGGCCCTCATTATCTGGCAGTGCGCCCTCCTCGTCTTCTCTTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS CCA 90 bp | TGGATTATCCTGACCCTGCTGGCTGGAGGGAGTCTCAGTGGAGGGTaGTGTCCGCCTACGGGCCCACCAATCCTTGGCTTTCTGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: WIILTLLAGGSLSGG*CPPTGPPILGFLPL Trigger: CAGTGGCAGAAAGCCAAGGATTGGTGGGCCCGTAGGCGGACACCACCCTCCACTGAGACTCCCTCCAGCCAGCAGGGTCAGGATAATCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS CCA 90 bp | CATAGCAGAGGTAAAAGTGGGCAGATCATCGTCCGTATCCAGGGCTaGATTATCCTGACCCTGCTGGCTGGAGGGAGTCTCAGTGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: HSRGKSGQIIVRIQG*IILTLLAGGSLSGG Trigger: CCCTCCACTGAGACTCCCTCCAGCCAGCAGGGTCAGGATAATCCAGCCCTGGATACGGACGATGATCTGCCCACTTTTACCTCTGCTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS GCA 90 bp | GTGGAGGGTGGTGTCCGCCTACGGGCCCACCAATCCTTGGCTTTCTaGCACTGGCGGCGGGCAATAATAGAGAAGAAATCAATGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VEGGVRLRAHQSLAF*HWRRAIIEKKSMKK Trigger: CTTCTTCATTGATTTCTTCTCTATTATTGCCCGCCGCCAGTGGCAGAAAGCCAAGGATTGGTGGGCCCGTAGGCGGACACCACCCTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS TCA 90 bp | TCGATCTCGGTCCCCACGTCTTCGATGAAAGGGTATTCATTCTGCTaGTGGACAAGCACCTTGGCTCCAGTGGATGACACCAGGAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SISVPTSSMKGYSFC*WTSTLAPVDDTRKG Trigger: CCCCTTCCTGGTGTCATCCACTGGAGCCAAGGTGCTTGTCCATCAGCAGAATGAATACCCTTTCATCGAAGACGTGGGGACCGAGATCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS TCA 90 bp | GGTGGTCAGTGTCCATTCCTTAAAGCTGCAGGATTGCTTGCACACTaGTTGGCAGCCCAGTTCTTCCCGGACAAAGGCCTGGTACAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GGQCPFLKAAGLLAH*LAAQFFPDKGLVQL Trigger: CAGCTGTACCAGGCCTTTGTCCGGGAAGAACTGGGCTGCCAATCAGTGTGCAAGCAATCCTGCAGCTTTAAGGAATGGACACTGACCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
||
| CDS GCA 90 bp | TGTGCCAAGCTGGTGGTCAGTGTCCATTCCTTAAAGCTGCAGGATTaGTTGCACACTGATTGGCAGCCCAGTTCTTCCCGGACAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CAKLVVSVHSLKLQD*LHTDWQPSSSRTKA Trigger: GGCCTTTGTCCGGGAAGAACTGGGCTGCCAATCAGTGTGCAAGCAATCCTGCAGCTTTAAGGAATGGACACTGACCACCAGCTTGGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
||
| CDS CCA 90 bp | GGTGGTGTCCGCCTACGGGCCCACCAATCCTTGGCTTTCTGCCACTaGCGGCGGGCAATAATAGAGAAGAAATCAATGAAGAAGACTTCG | + |
|
Preference number: 5 (lower is better) Translates to: GGVRLRAHQSLAFCH*RRAIIEKKSMKKTS Trigger: CGAAGTCTTCTTCATTGATTTCTTCTCTATTATTGCCCGCCGCCAGTGGCAGAAAGCCAAGGATTGGTGGGCCCGTAGGCGGACACCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
||
| CDS TCA 90 bp | CATCGCTGCCGTCCTCTGTGCACTGGCTGTAAGGTTCGCTCAGCTTaGAGGATTCTGTCAGGTGCATTCCTATGGAAGTGGACATTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HRCRPLCTGCKVRSA*RILSGAFLWKWTLL Trigger: CAGCAATGTCCACTTCCATAGGAATGCACCTGACAGAATCCTTCAAGCTGAGCGAACCTTACAGCCAGTGCACAGAGGACGGCAGCGATG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
||
| CDS CCA 90 bp | CCCGGACAAAGGCCTGGTACAGCTGGTAGTAGCAATACATCCAGTTaGGGTGTTGCTGGTAGTTGCAGTAATTGGCTGCTGGAGGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PGQRPGTAGSSNTSS*GVAGSCSNWLLEVE Trigger: CTCTACCTCCAGCAGCCAATTACTGCAACTACCAGCAACACCCCAACTGGATGTATTGCTACTACCAGCTGTACCAGGCCTTTGTCCGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
||
| CDS-3UTR CAA 90 bp | GGCTCTGAAACACCATTCTCTTTCAGGACCCCAGGAAGAGCTCACTGTTGGCCCAGCATCTCAATACTGTaGGCTGGGCTCTCCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: GSETPFSFRTPGRAHCWPSISIL*AGLSMM Trigger: CATCATGGAGAGCCCAGCCAACAGTATTGAGATGCT...GGGCCAACAGTGAGCTCTTCCTGGGGTCCTGAAAGAGAATGGTGTTTCAGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
||
| CDS TCA 90 bp | TGGAAGTGGACATTGCTGTCTCGATCTCGGTCCCCACGTCTTCGATaGAAGGGTATTCATTCTGCTGATGGACAAGCACCTTGGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: WKWTLLSRSRSPRLR*KGIHSADGQAPWLQ Trigger: CTGGAGCCAAGGTGCTTGTCCATCAGCAGAATGAATACCCTTTCATCGAAGACGTGGGGACCGAGATCGAGACAGCAATGTCCACTTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
||
| CDS CCA 90 bp | GAAGTCCCTGGCCTTTCCCTTCTCGTTCTCATTGAAGACCAACAATaGGATCAGGTTGAGAAATCTGGGTGGTGTGCCTTCCCACGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: EVPGLSLLVLIEDQQ*DQVEKSGWCAFPRG Trigger: TCCACGTGGGAAGGCACACCACCCAGATTTCTCAACCTGATCCCATTGTTGGTCTTCAATGAGAACGAGAAGGGAAAGGCCAGGGACTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
||
| CDS CCA 90 bp | GTCCCAGGTGAGAACATTCAGCAACCATTTCTCAGAAGCCTCAGATaGCCACTGTGCCAAGCTGGTGGTCAGTGTCCATTCCTTAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VPGENIQQPFLRSLR*PLCQAGGQCPFLKA Trigger: AGCTTTAAGGAATGGACACTGACCACCAGCTTGGCACAGTGGCCATCTGAGGCTTCTGAGAAATGGTTGCTGAATGTTCTCACCTGGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR CAA 90 bp | TCAGCAACCAACTGCTGGGATCCAAGGATGGTGCTAATTTCTTCTGTCACACCCCACTCCTGGATGGCATaGATTCCTGAGCTGAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: SATNCWDPRMVLISSVTPHSWMA*IPELKV Trigger: CACCTTCAGCTCAGGAATCAATGCCATCCAGGAGTG...GGGTGTGACAGAAGAAATTAGCACCATCCTTGGATCCCAGCAGTTGGTTGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR CAA 90 bp | CCTGAGCTTGGGGCTCTGAAACACCATTCTCTTTCAGGACCCCAGGAAGAGCTCGAGCTTTTTGTTTATTaGCTGGCTTTGGTCCCAGGT | + |
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Preference number: 5 (lower is better) Translates to: PELGALKHHSLSGPQEELELFVY*LALVPG Trigger: ACCTGGGACCAAAGCCAGCAAATAAACAAAAAGCTC...GAGCTCTTCCTGGGGTCCTGAAAGAGAATGGTGTTTCAGAGCCCCAAGCTCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS GCA 90 bp | CAGCTTGAAGGATTCTGTCAGGTGCATTCCTATGGAAGTGGACATTaGTGTCTCGATCTCGGTCCCCACGTCTTCGATGAAAGGGTATTC | + |
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Preference number: 5 (lower is better) Translates to: QLEGFCQVHSYGSGH*CLDLGPHVFDERVF Trigger: GAATACCCTTTCATCGAAGACGTGGGGACCGAGATCGAGACAGCAATGTCCACTTCCATAGGAATGCACCTGACAGAATCCTTCAAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS GCA 90 bp | GAGAACATTCAGCAACCATTTCTCAGAAGCCTCAGATGGCCACTGTaGCAAGCTGGTGGTCAGTGTCCATTCCTTAAAGCTGCAGGATTG | + |
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Preference number: 5 (lower is better) Translates to: ENIQQPFLRSLRWPL*QAGGQCPFLKAAGL Trigger: CAATCCTGCAGCTTTAAGGAATGGACACTGACCACCAGCTTGGCACAGTGGCCATCTGAGGCTTCTGAGAAATGGTTGCTGAATGTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR CAA 90 bp | TCAGCAACCAACTGCTGGGATCCAAGGATGGTGCTAATTTCTTCTGTCACACCCACAGCAAGGCCTGTTTaGTCTCACTGTCCAAGTCAG | + |
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Preference number: 5 (lower is better) Translates to: SATNCWDPRMVLISSVTPTARPV*SHCPSQ Trigger: CTGACTTGGACAGTGAGACAAAACAGGCCTTGCTGT...GGGTGTGACAGAAGAAATTAGCACCATCCTTGGATCCCAGCAGTTGGTTGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS CCA 90 bp | GGTGGCGTTTTCTCTGTTGTTGAACGTGTAGCAGTTCCCATACATTaGATGGTGGAAAAGAGTGAAGTTCCTGGCATCACAGGACATCCC | + |
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Preference number: 5 (lower is better) Translates to: GGVFSVVERVAVPIH*MVEKSEVPGITGHP Trigger: GGGATGTCCTGTGATGCCAGGAACTTCACTCTTTTCCACCATCCAATGTATGGGAACTGCTACACGTTCAACAACAGAGAAAACGCCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR CAA 90 bp | ACCCCAGGAAGAGCTCACTGTTGGCCCAGGTCATTCATTACCTTTGGCTCTTTACATCCAGTTGGGGTGTaGCTGGTAGTTGCAGTAATT | + |
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Preference number: 5 (lower is better) Translates to: TPGRAHCWPRSFITFGSLHPVGV*LVVAVI Trigger: AATTACTGCAACTACCAGCAACACCCCAACTGGATG...TAAAGAGCCAAAGGTAATGAATGACCTGGGCCAACAGTGAGCTCTTCCTGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR CAA 90 bp | ACCACTCGAGCTGAGATTAGGATAGGAGTACCATTTGGCAGGAGTGTCCAGCTATTTTTGATTTTGGCTTaGATCTTCTCTCCAGGCGCC | + |
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Preference number: 5 (lower is better) Translates to: TTRAEIRIGVPFGRSVQLFLILA*IFSPGA Trigger: GGCGCCTGGAGAGAAGATCAAAGCCAAAATCAAAAA...TAGCTGGACACTCCTGCCAAATGGTACTCCTATCCTAATCTCAGCTCGAGTGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR CAA 90 bp | AGGATAGGAGGACCATTTGTGTCAGGAAGAGAGTCTCCTCAAACCATGACTGTTTTCTGGAAGTGGACTTaGATGGAGACAGAGACGGTG | + |
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Preference number: 5 (lower is better) Translates to: RIGGPFVSGRESPQTMTVFWKWT*METETV Trigger: CACCGTCTCTGTCTCCATCAAAGTCCACTTCCAGAA...AACAGTCATGGTTTGAGGAGACTCTCTTCCTGACACAAATGGTCCTCCTATCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR CAA 90 bp | AGCAACCAACTGCTGGGATCCAAGGATGGTGCTAATTTCTTCTGTCACACCCATGACACCAGGAAGGGGTaGTACTCATCTTCGTTTATG | + |
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Preference number: 5 (lower is better) Translates to: SNQLLGSKDGANFFCHTHDTRKG*YSSSFM Trigger: CATAAACGAAGATGAGTACAACCCCTTCCTGGTGTC...ATGGGTGTGACAGAAGAAATTAGCACCATCCTTGGATCCCAGCAGTTGGTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR CAA 90 bp | ACCCCAGGAAGAGCTCACTGTTGGCCCAGGTCATTCATTACCTTTGGCTCTTTAGCCAGGTCAGTCTTGTaGAGCTTTTTGTTTATTTGC | + |
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Preference number: 5 (lower is better) Translates to: TPGRAHCWPRSFITFGSLARSVL*SFLFIC Trigger: GCAAATAAACAAAAAGCTCAACAAGACTGACCTGGC...TAAAGAGCCAAAGGTAATGAATGACCTGGGCCAACAGTGAGCTCTTCCTGGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR CAA 90 bp | AGGATAGGAGGACCATTTGTGTCAGGAAGAGAGTCTCCTCAAACCATGACTGTTAGTCAGAGGTGTCATTaGAGCACAACTGAAATCCCA | + |
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Preference number: 5 (lower is better) Translates to: RIGGPFVSGRESPQTMTVSQRCH*STTEIP Trigger: TGGGATTTCAGTTGTGCTCAAATGACACCTCTGACT...AACAGTCATGGTTTGAGGAGACTCTCTTCCTGACACAAATGGTCCTCCTATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR CAA 90 bp | CAGTTCAAAGACAAAATAAAGGATTGGGCCTGTAGGCTGGTGTTTGTTATGCCCCTCCATGATGGATCTTaGGTTCAGGTCTTTGTAGAA | + |
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Preference number: 5 (lower is better) Translates to: QFKDKIKDWACRLVFVMPLHDGS*VQVFVE Trigger: TTCTACAAAGACCTGAACCAAAGATCCATCATGGAG...GGGCATAACAAACACCAGCCTACAGGCCCAATCCTTTATTTTGTCTTTGAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS-3UTR CAA 90 bp | AGAGCTCACTGTTGGCCCAGGTCATTCATTACCTTTGGCTCTTTAGCTTATAAGTTGGCCAGGTCAGTCTaGTTGAGCTTTTTGTTTATT | + |
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Preference number: 5 (lower is better) Translates to: RAHCWPRSFITFGSLAYKLARSV*LSFLFI Trigger: AATAAACAAAAAGCTCAACAAGACTGACCTGGCCAA...CTTATAAGCTAAAGAGCCAAAGGTAATGAATGACCTGGGCCAACAGTGAGCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS CCA 72 bp | CTGACCCTGCTGGCTGGAGGGAGTCTCAGTGGAGGGTaGTGTCCGCCTACGGGCCCACCAATCCTTGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: LTLLAGGSLSGG*CPPTGPPILGF Trigger: AAAGCCAAGGATTGGTGGGCCCGTAGGCGGACACCACCCTCCACTGAGACTCCCTCCAGCCAGCAGGGTCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS GCA 72 bp | GACGAGGAGGGCGCACTGCCAGATAATGAGGGCCACTaGTGTCAGCGTGAACGCAATCCACAACAGGCGCCG | + |
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Preference number: 6 (lower is better) Translates to: DEEGALPDNEGH*CQRERNPQQAP Trigger: CGGCGCCTGTTGTGGATTGCGTTCACGCTGACAGCAGTGGCCCTCATTATCTGGCAGTGCGCCCTCCTCGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS CCA 72 bp | CCGTATCCAGGGCTGGATTATCCTGACCCTGCTGGCTaGAGGGAGTCTCAGTGGAGGGTGGTGTCCGCCTAC | + |
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Preference number: 6 (lower is better) Translates to: PYPGLDYPDPAG*RESQWRVVSAY Trigger: GTAGGCGGACACCACCCTCCACTGAGACTCCCTCCAGCCAGCAGGGTCAGGATAATCCAGCCCTGGATACGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS CAA 72 bp | GTGGAGGGTGGTGTCCGCCTACGGGCCCACCAATCCTaGGCTTTCTGCCACTGGCGGCGGGCAATAATAGAG | + |
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Preference number: 6 (lower is better) Translates to: VEGGVRLRAHQS*AFCHWRRAIIE Trigger: CTCTATTATTGCCCGCCGCCAGTGGCAGAAAGCCAAGGATTGGTGGGCCCGTAGGCGGACACCACCCTCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS TCA 72 bp | GGCAGATCATCGTCCGTATCCAGGGCTGGATTATCCTaGCCCTGCTGGCTGGAGGGAGTCTCAGTGGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: GRSSSVSRAGLS*PCWLEGVSVEG Trigger: ACCCTCCACTGAGACTCCCTCCAGCCAGCAGGGTCAGGATAATCCAGCCCTGGATACGGACGATGATCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS CAA 90 bp | GGAGTCTCAGTGGAGGGTGGTGTCCGCCTACGGGCCCACCAATCCTaGGCTTTCTGCCACTGGCGGCGGGCAATAATAGAGAAGAAATCA | + |
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Preference number: 6 (lower is better) Translates to: GVSVEGGVRLRAHQS*AFCHWRRAIIEKKS Trigger: TGATTTCTTCTCTATTATTGCCCGCCGCCAGTGGCAGAAAGCCAAGGATTGGTGGGCCCGTAGGCGGACACCACCCTCCACTGAGACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS GCA 72 bp | GGTGTCCGCCTACGGGCCCACCAATCCTTGGCTTTCTaGCACTGGCGGCGGGCAATAATAGAGAAGAAATCA | + |
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Preference number: 6 (lower is better) Translates to: GVRLRAHQSLAF*HWRRAIIEKKS Trigger: TGATTTCTTCTCTATTATTGCCCGCCGCCAGTGGCAGAAAGCCAAGGATTGGTGGGCCCGTAGGCGGACACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS GCA 72 bp | CTGGTGGTCAGTGTCCATTCCTTAAAGCTGCAGGATTaGTTGCACACTGATTGGCAGCCCAGTTCTTCCCGG | + |
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Preference number: 6 (lower is better) Translates to: LVVSVHSLKLQD*LHTDWQPSSSR Trigger: CCGGGAAGAACTGGGCTGCCAATCAGTGTGCAAGCAATCCTGCAGCTTTAAGGAATGGACACTGACCACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS CCA 72 bp | ACATCCAGTTGGGGTGTTGCTGGTAGTTGCAGTAATTaGCTGCTGGAGGTAGAGGCTGACTGTACTGGGCAC | + |
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Preference number: 6 (lower is better) Translates to: TSSWGVAGSCSN*LLEVEADCTGH Trigger: GTGCCCAGTACAGTCAGCCTCTACCTCCAGCAGCCAATTACTGCAACTACCAGCAACACCCCAACTGGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS TCA 72 bp | GTCCCCACGTCTTCGATGAAAGGGTATTCATTCTGCTaGTGGACAAGCACCTTGGCTCCAGTGGATGACACC | + |
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Preference number: 6 (lower is better) Translates to: VPTSSMKGYSFC*WTSTLAPVDDT Trigger: GGTGTCATCCACTGGAGCCAAGGTGCTTGTCCATCAGCAGAATGAATACCCTTTCATCGAAGACGTGGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS TCA 72 bp | CGTCCTCTGTGCACTGGCTGTAAGGTTCGCTCAGCTTaGAGGATTCTGTCAGGTGCATTCCTATGGAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: RPLCTGCKVRSA*RILSGAFLWKW Trigger: CCACTTCCATAGGAATGCACCTGACAGAATCCTTCAAGCTGAGCGAACCTTACAGCCAGTGCACAGAGGACG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS GCA 72 bp | CAGGCAGTACCAATGCATCAGGTCCTTAATGGTCGGTaGCTGGGGGCCTCGAACTGGCAGATTCTTTTTGAT | + |
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Preference number: 6 (lower is better) Translates to: QAVPMHQVLNGR*LGASNWQILFD Trigger: ATCAAAAAGAATCTGCCAGTTCGAGGCCCCCAGGCACCGACCATTAAGGACCTGATGCATTGGTACTGCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS CAA 90 bp | GCCTTTCCCTTCTCGTTCTCATTGAAGACCAACAATGGGATCAGGTaGAGAAATCTGGGTGGTGTGCCTTCCCACGTGGACCGCATGGAT | + |
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Preference number: 6 (lower is better) Translates to: AFPFSFSLKTNNGIR*RNLGGVPSHVDRMD Trigger: ATCCATGCGGTCCACGTGGGAAGGCACACCACCCAGATTTCTCAACCTGATCCCATTGTTGGTCTTCAATGAGAACGAGAAGGGAAAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS TCA 72 bp | CCCGGCGTTTCCGAGGTGTACTGTCTAGAACATCTTTaGCCCCATACAAGGACAGCAAGGCCTGTTTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: PGVSEVYCLEHL*PHTRTARPVLS Trigger: AGACAAAACAGGCCTTGCTGTCCTTGTATGGGGTCAAAGATGTTCTAGACAGTACACCTCGGAAACGCCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS GCA 72 bp | GGATTCTGTCAGGTGCATTCCTATGGAAGTGGACATTaGTGTCTCGATCTCGGTCCCCACGTCTTCGATGAA | + |
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Preference number: 6 (lower is better) Translates to: GFCQVHSYGSGH*CLDLGPHVFDE Trigger: TTCATCGAAGACGTGGGGACCGAGATCGAGACAGCAATGTCCACTTCCATAGGAATGCACCTGACAGAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS GCA 72 bp | CAGCAACCATTTCTCAGAAGCCTCAGATGGCCACTGTaGCAAGCTGGTGGTCAGTGTCCATTCCTTAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: QQPFLRSLRWPL*QAGGQCPFLKA Trigger: AGCTTTAAGGAATGGACACTGACCACCAGCTTGGCACAGTGGCCATCTGAGGCTTCTGAGAAATGGTTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS CCA 72 bp | GAGAACATTCAGCAACCATTTCTCAGAAGCCTCAGATaGCCACTGTGCCAAGCTGGTGGTCAGTGTCCATTC | + |
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Preference number: 6 (lower is better) Translates to: ENIQQPFLRSLR*PLCQAGGQCPF Trigger: GAATGGACACTGACCACCAGCTTGGCACAGTGGCCATCTGAGGCTTCTGAGAAATGGTTGCTGAATGTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS CAA 72 bp | TCCCGGCGTTTCCGAGGTGTACTGTCTAGAACATCTTaGACCCCATACAAGGACAGCAAGGCCTGTTTTGTC | + |
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Preference number: 6 (lower is better) Translates to: SRRFRGVLSRTS*TPYKDSKACFV Trigger: GACAAAACAGGCCTTGCTGTCCTTGTATGGGGTCAAAGATGTTCTAGACAGTACACCTCGGAAACGCCGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS CAA 90 bp | TTCCGACCAGTGAAGAAGTCCCTGGCCTTTCCCTTCTCGTTCTCATaGAAGACCAACAATGGGATCAGGTTGAGAAATCTGGGTGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: FRPVKKSLAFPFSFS*KTNNGIRLRNLGGV Trigger: CACACCACCCAGATTTCTCAACCTGATCCCATTGTTGGTCTTCAATGAGAACGAGAAGGGAAAGGCCAGGGACTTCTTCACTGGTCGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS TCA 72 bp | ACATTGCTGTCTCGATCTCGGTCCCCACGTCTTCGATaGAAGGGTATTCATTCTGCTGATGGACAAGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: TLLSRSRSPRLR*KGIHSADGQAP Trigger: AGGTGCTTGTCCATCAGCAGAATGAATACCCTTTCATCGAAGACGTGGGGACCGAGATCGAGACAGCAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS CCA 72 bp | ATTCATTCTGCTGATGGACAAGCACCTTGGCTCCAGTaGATGACACCAGGAAGGGGTTGTACTCATCTTCGT | + |
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Preference number: 6 (lower is better) Translates to: IHSADGQAPWLQ*MTPGRGCTHLR Trigger: ACGAAGATGAGTACAACCCCTTCCTGGTGTCATCCACTGGAGCCAAGGTGCTTGTCCATCAGCAGAATGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS CAA 72 bp | TTCTCGTTCTCATTGAAGACCAACAATGGGATCAGGTaGAGAAATCTGGGTGGTGTGCCTTCCCACGTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: FSFSLKTNNGIR*RNLGGVPSHVD Trigger: GTCCACGTGGGAAGGCACACCACCCAGATTTCTCAACCTGATCCCATTGTTGGTCTTCAATGAGAACGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS TCA 72 bp | ATTCTGCTGATGGACAAGCACCTTGGCTCCAGTGGATaGCACCAGGAAGGGGTTGTACTCATCTTCGTTTAT | + |
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Preference number: 6 (lower is better) Translates to: ILLMDKHLGSSG*HQEGVVLIFVY Trigger: ATAAACGAAGATGAGTACAACCCCTTCCTGGTGTCATCCACTGGAGCCAAGGTGCTTGTCCATCAGCAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS TCA 72 bp | GGAAGGGGTTGTACTCATCTTCGTTTATGTATAAGATaGCTTGCAGACCATACTCACTGCCTCCCATGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GRGCTHLRLCIR*LADHTHCLPWR Trigger: CCTCCATGGGAGGCAGTGAGTATGGTCTGCAAGTCATCTTATACATAAACGAAGATGAGTACAACCCCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS CAA 72 bp | GTGAAGAAGTCCCTGGCCTTTCCCTTCTCGTTCTCATaGAAGACCAACAATGGGATCAGGTTGAGAAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: VKKSLAFPFSFS*KTNNGIRLRNL Trigger: CAGATTTCTCAACCTGATCCCATTGTTGGTCTTCAATGAGAACGAGAAGGGAAAGGCCAGGGACTTCTTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS CAA 72 bp | AGCACCTTGGCTCCAGTGGATGACACCAGGAAGGGGTaGTACTCATCTTCGTTTATGTATAAGATGACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: STLAPVDDTRKG*YSSSFMYKMTC Trigger: GCAAGTCATCTTATACATAAACGAAGATGAGTACAACCCCTTCCTGGTGTCATCCACTGGAGCCAAGGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS CCA 72 bp | ACCAAAGTTAGACAGGAGCATCTCAATACTGTTGGCTaGGCTCTCCATGATGGATCTTTGGTTCAGGTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: TKVRQEHLNTVG*ALHDGSLVQVF Trigger: AAAGACCTGAACCAAAGATCCATCATGGAGAGCCCAGCCAACAGTATTGAGATGCTCCTGTCTAACTTTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS TCA 72 bp | ACAGGAGCATCTCAATACTGTTGGCTGGGCTCTCCATaGTGGATCTTTGGTTCAGGTCTTTGTAGAATATCA | + |
|
Preference number: 6 (lower is better) Translates to: TGASQYCWLGSP*WIFGSGLCRIS Trigger: TGATATTCTACAAAGACCTGAACCAAAGATCCATCATGGAGAGCCCAGCCAACAGTATTGAGATGCTCCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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| CDS CCA 72 bp | TTCTCTGTTGTTGAACGTGTAGCAGTTCCCATACATTaGATGGTGGAAAAGAGTGAAGTTCCTGGCATCACA | + |
|
Preference number: 6 (lower is better) Translates to: FSVVERVAVPIH*MVEKSEVPGIT Trigger: TGTGATGCCAGGAACTTCACTCTTTTCCACCATCCAATGTATGGGAACTGCTACACGTTCAACAACAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000221.6 |
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