Pregenerated sensors for SCN4B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046480Ensembl transcript IDs: ENSMUST00000060125.7
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CATCCCACATCACCCCTCGCGTGCACAGCCCACCCTCTTCTGTCATaGCTCTGCACCCGCAGACTGACTAGGCACGCCTTTCCACCTCCC | + |
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Preference number: 1 (lower is better) Translates to: HPTSPLACTAHPLLS*LCTRRLTRHAFPPP Trigger: GGGAGGTGGAAAGGCGTGCCTAGTCAGTCTGCGGGTGCAGAGGCATGACAGAAGAGGGTGGGCTGTGCACGCGAGGGGTGATGTGGGATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR CCA 90 bp | CAACCCTTGTCCCTAGGAAGCCCTGGCTGGGGAGAGAACGGCAGCTaGGCAGGGCCAGGTCCTTCCTGCTCAGAAAGAACAGTTTGGGCC | + |
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Preference number: 1 (lower is better) Translates to: QPLSLGSPGWGENGS*AGPGPSCSERTVWA Trigger: GGCCCAAACTGTTCTTTCTGAGCAGGAAGGACCTGGCCCTGCCCAGCTGCCGTTCTCTCCCCAGCCAGGGCTTCCTAGGGACAAGGGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR TCA 90 bp | CGTGCACAGCCCACCCTCTTCTGTCATGCCTCTGCACCCGCAGACTaGCTAGGCACGCCTTTCCACCTCCCACACACCACAAGCACTCCA | + |
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Preference number: 1 (lower is better) Translates to: RAQPTLFCHASAPAD*LGTPFHLPHTTSTP Trigger: TGGAGTGCTTGTGGTGTGTGGGAGGTGGAAAGGCGTGCCTAGTCAGTCTGCGGGTGCAGAGGCATGACAGAAGAGGGTGGGCTGTGCACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR CCA 90 bp | GCAAGACAACCTAATGGCATTCGATCTGTGCTTAGACGCAAGCGCTaGGCATGTGCAGGTCGGTGCCTCCTGGAGGCTCCCACGGCCCAC | + |
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Preference number: 1 (lower is better) Translates to: ARQPNGIRSVLRRKR*ACAGRCLLEAPTAH Trigger: GTGGGCCGTGGGAGCCTCCAGGAGGCACCGACCTGCACATGCCCAGCGCTTGCGTCTAAGCACAGATCGAATGCCATTAGGTTGTCTTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR GCA 90 bp | AAGGCACAATCTAGCCCCACACTCAGGGGGTGTGCAAGCCGGCTCTaGCAGAAGTCAAGAGAAGGTGTGAGTACCTTCTCCCAGCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: KAQSSPTLRGCASRL*QKSREGVSTFSQLL Trigger: GAGGAGCTGGGAGAAGGTACTCACACCTTCTCTTGACTTCTGGCAGAGCCGGCTTGCACACCCCCTGAGTGTGGGGCTAGATTGTGCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR TCA 90 bp | TGCTCTTGCCTCCCTGGCTCCACAGAAGCGAGTCAGTCAGATACGTaGCATTCTGCTGCCCTCCTGTCTGTCATTCTCCTGGGCCTTCCA | + |
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Preference number: 1 (lower is better) Translates to: CSCLPGSTEASQSDT*HSAALLSVILLGLP Trigger: TGGAAGGCCCAGGAGAATGACAGACAGGAGGGCAGCAGAATGTCACGTATCTGACTGACTCGCTTCTGTGGAGCCAGGGAGGCAAGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR GCA 90 bp | TCCATGTCAGGGACAAGAAAGGGTGCCCTCAGGTGTCATCAAGGCTaGCACCAACCCCGGCTTCATGGTCTCTTCCATGGCTTTGGGGTA | + |
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Preference number: 1 (lower is better) Translates to: SMSGTRKGALRCHQG*HQPRLHGLFHGFGV Trigger: TACCCCAAAGCCATGGAAGAGACCATGAAGCCGGGGTTGGTGGCAGCCTTGATGACACCTGAGGGCACCCTTTCTTGTCCCTGACATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR CCA 90 bp | GGCAGCTGGGCAGGGCCAGGTCCTTCCTGCTCAGAAAGAACAGTTTaGGCCAAGCAGCACACATCTCAGATAGGACTTGGCATCAGGATC | + |
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Preference number: 1 (lower is better) Translates to: GSWAGPGPSCSERTV*AKQHTSQIGLGIRI Trigger: GATCCTGATGCCAAGTCCTATCTGAGATGTGTGCTGCTTGGCCCAAACTGTTCTTTCTGAGCAGGAAGGACCTGGCCCTGCCCAGCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR CCA 90 bp | GGGAAGAAGAGTGAAAAACTGAGCTCCGGAAGTGCCAGGGTGGCATaGTCCTGCCATGCCAAGGACAAGGGCTGTCAGTCTTGTAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: GKKSEKLSSGSARVA*SCHAKDKGCQSCRA Trigger: AGCCCTACAAGACTGACAGCCCTTGTCCTTGGCATGGCAGGACCATGCCACCCTGGCACTTCCGGAGCTCAGTTTTTCACTCTTCTTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR CCA 90 bp | GCTCACACCTGTCATACCAGCACTGTGGCAATGGAGGCAGGAGATTaGGAGTTCAAGGCCAGTCTTGGCTACATAGAGAGGTGGAGGCCC | + |
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Preference number: 1 (lower is better) Translates to: AHTCHTSTVAMEAGD*EFKASLGYIERWRP Trigger: GGGCCTCCACCTCTCTATGTAGCCAAGACTGGCCTTGAACTCCCAATCTCCTGCCTCCATTGCCACAGTGCTGGTATGACAGGTGTGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR CCA 90 bp | GGGTGCCATGTTGGTTCTCAGAGCCAGGTTACTCTAAGCAGGGTGTaGGCTCACACCTGTCATACCAGCACTGTGGCAATGGAGGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: GCHVGSQSQVTLSRV*AHTCHTSTVAMEAG Trigger: TCCTGCCTCCATTGCCACAGTGCTGGTATGACAGGTGTGAGCCCACACCCTGCTTAGAGTAACCTGGCTCTGAGAACCAACATGGCACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR TCA 90 bp | CCCCCAGAAGACACCATTCTAGACTTCTTGTGCATTCCCAGCTTCTaGAGCGGTCACCCTCTACCCATCTCCAGACCCCAGCTTTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: PPEDTILDFLCIPSF*SGHPLPISRPQLWK Trigger: CTTCCAAAGCTGGGGTCTGGAGATGGGTAGAGGGTGACCGCTTCAGAAGCTGGGAATGCACAAGAAGTCTAGAATGGTGTCTTCTGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR TCA 90 bp | AGGCCAGGCATGCTGGATGGACACAGAAGGAGCAAAGGTATGGGATaGCAAGTCCTAGGAAAGCATCCCTCAGGGAAGGTGGCAATGCCA | + |
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Preference number: 1 (lower is better) Translates to: RPGMLDGHRRSKGMG*QVLGKHPSGKVAMP Trigger: TGGCATTGCCACCTTCCCTGAGGGATGCTTTCCTAGGACTTGTCATCCCATACCTTTGCTCCTTCTGTGTCCATCCAGCATGCCTGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR GCA 90 bp | TACATGAAGGCAGCTGGAAGTTTCCTGAATGGCTGGAGGCTCGGGTaGCATGTTGGTTCTCAGAGCCAGGTTACTCTAAGCAGGGTGTGG | + |
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Preference number: 1 (lower is better) Translates to: YMKAAGSFLNGWRLG*HVGSQSQVTLSRVW Trigger: CCACACCCTGCTTAGAGTAACCTGGCTCTGAGAACCAACATGGCACCCGAGCCTCCAGCCATTCAGGAAACTTCCAGCTGCCTTCATGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR GCA 90 bp | GTCTGTCATTCTCCTGGGCCTTCCACACTGCAGGTTGATTCCAGTTaGCCTCTGCTTAGTTTCTACACCAAGGGATCTGAGCCCTCAAGG | + |
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Preference number: 1 (lower is better) Translates to: VCHSPGPSTLQVDSS*PLLSFYTKGSEPSR Trigger: CCTTGAGGGCTCAGATCCCTTGGTGTAGAAACTAAGCAGAGGGCAACTGGAATCAACCTGCAGTGTGGAAGGCCCAGGAGAATGACAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR GCA 90 bp | CATTCTGCTGCCCTCCTGTCTGTCATTCTCCTGGGCCTTCCACACTaGAGGTTGATTCCAGTTGCCCTCTGCTTAGTTTCTACACCAAGG | + |
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Preference number: 1 (lower is better) Translates to: HSAALLSVILLGLPH*RLIPVALCLVSTPR Trigger: CCTTGGTGTAGAAACTAAGCAGAGGGCAACTGGAATCAACCTGCAGTGTGGAAGGCCCAGGAGAATGACAGACAGGAGGGCAGCAGAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR CCA 90 bp | AGAAAGAACAGTTTGGGCCAAGCAGCACACATCTCAGATAGGACTTaGCATCAGGATCACCATCAGAAAGCGAGGCTCCCTGCCCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: RKNSLGQAAHISDRT*HQDHHQKARLPALL Trigger: AAGCAGGGCAGGGAGCCTCGCTTTCTGATGGTGATCCTGATGCCAAGTCCTATCTGAGATGTGTGCTGCTTGGCCCAAACTGTTCTTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR TCA 90 bp | TTGGAAGTCAAGAGTAAGGTACTTGTGCTTTGTCTTTGGTCTCACTaGCATCAAGGTCAACACAACTGCATGGGTCCAGGTTTCCCCAAA | + |
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Preference number: 1 (lower is better) Translates to: LEVKSKVLVLCLWSH*HQGQHNCMGPGFPK Trigger: TTTGGGGAAACCTGGACCCATGCAGTTGTGTTGACCTTGATGTCAGTGAGACCAAAGACAAAGCACAAGTACCTTACTCTTGACTTCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR CCA 90 bp | GTTTCTACACCAAGGGATCTGAGCCCTCAAGGGCAGAAGTTTATTTaGAAGTCAAGAGTAAGGTACTTGTGCTTTGTCTTTGGTCTCACT | + |
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Preference number: 1 (lower is better) Translates to: VSTPRDLSPQGQKFI*KSRVRYLCFVFGLT Trigger: AGTGAGACCAAAGACAAAGCACAAGTACCTTACTCTTGACTTCCAAATAAACTTCTGCCCTTGAGGGCTCAGATCCCTTGGTGTAGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR GCA 90 bp | CCTCAAGGGCAGAAGTTTATTTGGAAGTCAAGAGTAAGGTACTTGTaGTTTGTCTTTGGTCTCACTGACATCAAGGTCAACACAACTGCA | + |
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Preference number: 1 (lower is better) Translates to: PQGQKFIWKSRVRYL*FVFGLTDIKVNTTA Trigger: TGCAGTTGTGTTGACCTTGATGTCAGTGAGACCAAAGACAAAGCACAAGTACCTTACTCTTGACTTCCAAATAAACTTCTGCCCTTGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR-3UTR CCA 90 bp | CAAGCGCTGGGCATGTGCAGGTCGGTGCCTCCTGGAGGCTCCCACGGCCCACCAACCCCAAGAGCCCCTTaGCTTGGGCAACAGACACTA | + |
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Preference number: 2 (lower is better) Translates to: QALGMCRSVPPGGSHGPPTPRAP*LGQQTL Trigger: TAGTGTCTGTTGCCCAAGCCAAGGGGCTCTTGGGGT...TGGTGGGCCGTGGGAGCCTCCAGGAGGCACCGACCTGCACATGCCCAGCGCTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR-3UTR GCA 90 bp | TCTGTGCTTAGACGCAAGCGCTGGGCATGTGCAGGTCGGTGCCTCCTGGAGGCTACATCACCCCTCGCGTaGACAGCCCACCCTCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: SVLRRKRWACAGRCLLEATSPLA*TAHPLL Trigger: CAGAAGAGGGTGGGCTGTGCACGCGAGGGGTGATGT...AGCCTCCAGGAGGCACCGACCTGCACATGCCCAGCGCTTGCGTCTAAGCACAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR CAA 90 bp | CTGTCTTCAATCTCCTGTAGGCTTCCTCCCCCAGTCAACCAACCCTaGTCCCTAGGAAGCCCTGGCTGGGGAGAGAACGGCAGCTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: LSSISCRLPPPVNQP*SLGSPGWGENGSWA Trigger: TGCCCAGCTGCCGTTCTCTCCCCAGCCAGGGCTTCCTAGGGACAAGGGTTGGTTGACTGGGGGAGGAAGCCTACAGGAGATTGAAGACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR-3UTR CCA 90 bp | GACCCCAGCTTTGGAAGCAGCCCTCACTGGTCACCCCGATTTCCTGGTGAAAGACTAGGAAGCCCTGGCTaGGGAGAGAACGGCAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: DPSFGSSPHWSPRFPGERLGSPG*GENGSW Trigger: CCAGCTGCCGTTCTCTCCCCAGCCAGGGCTTCCTAG...TCTTTCACCAGGAAATCGGGGTGACCAGTGAGGGCTGCTTCCAAAGCTGGGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR-3UTR TCA 90 bp | TCTGTGCTTAGACGCAAGCGCTGGGCATGTGCAGGTCGGTGCCTCCTGGAGGCTCTGTTCTCCTGCCTCTaGAACCCAAAGAGCAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: SVLRRKRWACAGRCLLEALFSCL*NPKSKA Trigger: GGCTTTGCTCTTTGGGTTTCAGAGGCAGGAGAACAG...AGCCTCCAGGAGGCACCGACCTGCACATGCCCAGCGCTTGCGTCTAAGCACAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR-3UTR CCA 90 bp | GTTGGTTCTCAGAGCCAGGTTACTCTAAGCAGGGTGTGGGCTCACACCTGTCATGGAGAGAACGGCAGCTaGGCAGGGCCAGGTCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: VGSQSQVTLSRVWAHTCHGENGS*AGPGPS Trigger: GGAAGGACCTGGCCCTGCCCAGCTGCCGTTCTCTCC...ATGACAGGTGTGAGCCCACACCCTGCTTAGAGTAACCTGGCTCTGAGAACCAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR-3UTR CCA 90 bp | AACCCCTTCATCCCACATCACCCCTCGCGTGCACAGCCCACCCTCTTCTGTCATGAAGGCCAGGCATGCTaGATGGACACAGAAGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: NPFIPHHPSRAQPTLFCHEGQAC*MDTEGA Trigger: TGCTCCTTCTGTGTCCATCCAGCATGCCTGGCCTTC...ATGACAGAAGAGGGTGGGCTGTGCACGCGAGGGGTGATGTGGGATGAAGGGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR-3UTR CCA 90 bp | TCTGTGCTTAGACGCAAGCGCTGGGCATGTGCAGGTCGGTGCCTCCTGGAGGCTTCATGGTCTCTTCCATaGCTTTGGGGTAAGGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: SVLRRKRWACAGRCLLEASWSLP*LWGKEL Trigger: CAGCTCCTTACCCCAAAGCCATGGAAGAGACCATGA...AGCCTCCAGGAGGCACCGACCTGCACATGCCCAGCGCTTGCGTCTAAGCACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR-3UTR CCA 90 bp | TCTGTGCTTAGACGCAAGCGCTGGGCATGTGCAGGTCGGTGCCTCCTGGAGGCTCTGGGTAAAGAAGAATaGGAAGAGTGGAGGCAACCC | + |
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Preference number: 2 (lower is better) Translates to: SVLRRKRWACAGRCLLEALGKEE*EEWRQP Trigger: GGGTTGCCTCCACTCTTCCCATTCTTCTTTACCCAG...AGCCTCCAGGAGGCACCGACCTGCACATGCCCAGCGCTTGCGTCTAAGCACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR CAA 90 bp | CGGCAGCTGGGCAGGGCCAGGTCCTTCCTGCTCAGAAAGAACAGTTaGGGCCAAGCAGCACACATCTCAGATAGGACTTGGCATCAGGAT | + |
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Preference number: 2 (lower is better) Translates to: RQLGRARSFLLRKNS*GQAAHISDRTWHQD Trigger: ATCCTGATGCCAAGTCCTATCTGAGATGTGTGCTGCTTGGCCCAAACTGTTCTTTCTGAGCAGGAAGGACCTGGCCCTGCCCAGCTGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR CAA 90 bp | CAGCTTCTGAAGCGGTCACCCTCTACCCATCTCCAGACCCCAGCTTaGGAAGCAGCCCTCACTGGTCACCCCGATTTCCTGGTGAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: QLLKRSPSTHLQTPA*EAALTGHPDFLVKD Trigger: ATCTTTCACCAGGAAATCGGGGTGACCAGTGAGGGCTGCTTCCAAAGCTGGGGTCTGGAGATGGGTAGAGGGTGACCGCTTCAGAAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR CAA 90 bp | GGCTCACACCTGTCATACCAGCACTGTGGCAATGGAGGCAGGAGATaGGGAGTTCAAGGCCAGTCTTGGCTACATAGAGAGGTGGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: GSHLSYQHCGNGGRR*GVQGQSWLHREVEA Trigger: GGCCTCCACCTCTCTATGTAGCCAAGACTGGCCTTGAACTCCCAATCTCCTGCCTCCATTGCCACAGTGCTGGTATGACAGGTGTGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR CAA 90 bp | GGAAGCTGGGAAGGGAGAGTCCCTCCCTCTCTTCTGCTCTATGCCTaGGCTTCCTCTCAGGAAAGCAAGAAGAACCCCCAACACTTGGCC | + |
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Preference number: 2 (lower is better) Translates to: GSWEGRVPPSLLLYA*ASSQESKKNPQHLA Trigger: GGCCAAGTGTTGGGGGTTCTTCTTGCTTTCCTGAGAGGAAGCCAAGGCATAGAGCAGAAGAGAGGGAGGGACTCTCCCTTCCCAGCTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR-3UTR GCA 90 bp | AAGGGCCTTCTCATCTGGAAACAAGGGTCCCTGAGGCAAAGGCAGACCCAGAGCGGGCCAGGTCCTTCCTaGTCAGAAAGAACAGTTTGG | + |
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Preference number: 2 (lower is better) Translates to: KGLLIWKQGSLRQRQTQSGPGPS*SERTVW Trigger: CCAAACTGTTCTTTCTGAGCAGGAAGGACCTGGCCC...GCTCTGGGTCTGCCTTTGCCTCAGGGACCCTTGTTTCCAGATGAGAAGGCCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR CAA 90 bp | GCTGCCCTCCTGTCTGTCATTCTCCTGGGCCTTCCACACTGCAGGTaGATTCCAGTTGCCCTCTGCTTAGTTTCTACACCAAGGGATCTG | + |
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Preference number: 2 (lower is better) Translates to: AALLSVILLGLPHCR*IPVALCLVSTPRDL Trigger: CAGATCCCTTGGTGTAGAAACTAAGCAGAGGGCAACTGGAATCAACCTGCAGTGTGGAAGGCCCAGGAGAATGACAGACAGGAGGGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR-3UTR TCA 90 bp | AAGGCCAGTCTTGGCTACATAGAGAGGTGGAGGCCCGCCTGGGCCACACATGAGAGCAAAGGTATGGGATaGCAAGTCCTAGGAAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: KASLGYIERWRPAWATHESKGMG*QVLGKH Trigger: ATGCTTTCCTAGGACTTGTCATCCCATACCTTTGCT...CTCATGTGTGGCCCAGGCGGGCCTCCACCTCTCTATGTAGCCAAGACTGGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR-3UTR CCA 90 bp | CCGAAAGAAAAGGGGCTCAGAACCAGGACTCGAGGAACTAAGGCACAATCTAGCGGAAGCAGCCCTCACTaGTCACCCCGATTTCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: PKEKGLRTRTRGTKAQSSGSSPH*SPRFPG Trigger: ACCAGGAAATCGGGGTGACCAGTGAGGGCTGCTTCC...GCTAGATTGTGCCTTAGTTCCTCGAGTCCTGGTTCTGAGCCCCTTTTCTTTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR-3UTR TCA 90 bp | AAGGCCAGTCTTGGCTACATAGAGAGGTGGAGGCCCGCCTGGGCCACACATGAGTTACCCAGCTCACAATaGGTTCTGGGTAAAGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: KASLGYIERWRPAWATHELPSSQ*VLGKEE Trigger: TTCTTCTTTACCCAGAACTCATTGTGAGCTGGGTAA...CTCATGTGTGGCCCAGGCGGGCCTCCACCTCTCTATGTAGCCAAGACTGGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR-3UTR CCA 90 bp | AGACTTGCCTGTCAGAGGGTCTGGCTAGAGAAAATGGCTTTGCAAATATACATTAGGCAGACCCAGAGCTaGGGGGCCAGGAGCAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: RLACQRVWLEKMALQIYIRQTQS*GARSRG Trigger: TCCCCTGCTCCTGGCCCCCCAGCTCTGGGTCTGCCT...AATGTATATTTGCAAAGCCATTTTCTCTAGCCAGACCCTCTGACAGGCAAGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR-3UTR TCA 90 bp | AGGCTGCCACCAACCCCGGCTTCATGGTCTCTTCCATGGCTTTGGGGTAAGGAGGATCAGAAGGAAAACTaGGGAGAAAACAAGGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: RLPPTPASWSLPWLWGKEDQKEN*GENKAS Trigger: TGAAGCCTTGTTTTCTCCTCAGTTTTCCTTCTGATC...CTCCTTACCCCAAAGCCATGGAAGAGACCATGAAGCCGGGGTTGGTGGCAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR-3UTR CCA 90 bp | CCTGACATGGAGTCACCCAGTAGAATCCAGGAGCATAGCCGTTCATTTATGTCTTCCAGACCCCAGCTTTaGAAGCAGCCCTCACTGGTC | + |
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Preference number: 2 (lower is better) Translates to: PDMESPSRIQEHSRSFMSSRPQL*KQPSLV Trigger: GACCAGTGAGGGCTGCTTCCAAAGCTGGGGTCTGGA...AGACATAAATGAACGGCTATGCTCCTGGATTCTACTGGGTGACTCCATGTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR-3UTR CCA 90 bp | CACTGCAGGTTGATTCCAGTTGCCCTCTGCTTAGTTTCTACACCAAGGGATCTGACCTTCAGCTACTCCTaGGCAGAGCCTGTAGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: HCRLIPVALCLVSTPRDLTFSYS*AEPVAV Trigger: GACTGCTACAGGCTCTGCCCAGGAGTAGCTGAAGGT...CAGATCCCTTGGTGTAGAAACTAAGCAGAGGGCAACTGGAATCAACCTGCAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR-3UTR CCA 90 bp | AGACTTGCCTGTCAGAGGGTCTGGCTAGAGAAAATGGCTTTGCAAATATACATTCCGGAAGTGCCAGGGTaGCATGGTCCTGCCATGCCA | + |
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Preference number: 2 (lower is better) Translates to: RLACQRVWLEKMALQIYIPEVPG*HGPAMP Trigger: TGGCATGGCAGGACCATGCCACCCTGGCACTTCCGG...AATGTATATTTGCAAAGCCATTTTCTCTAGCCAGACCCTCTGACAGGCAAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR-3UTR CCA 90 bp | CACTGCAGGTTGATTCCAGTTGCCCTCTGCTTAGTTTCTACACCAAGGGATCTGACTCTAAGCAGGGTGTaGGCTCACACCTGTCATACC | + |
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Preference number: 2 (lower is better) Translates to: HCRLIPVALCLVSTPRDLTLSRV*AHTCHT Trigger: GGTATGACAGGTGTGAGCCCACACCCTGCTTAGAGT...CAGATCCCTTGGTGTAGAAACTAAGCAGAGGGCAACTGGAATCAACCTGCAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR-3UTR GCA 90 bp | AGCATAGCCGTTCATTTATGTCTCTTAACCCTTCTTCAGTCTCCAGTTCAGGCTAGCCTCCTCAGCAGCTaGAGCCCAGAGAGCAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: SIAVHLCLLTLLQSPVQASLLSS*SPESKD Trigger: GTCTTTGCTCTCTGGGCTGCAGCTGCTGAGGAGGCT...AGCCTGAACTGGAGACTGAAGAAGGGTTAAGAGACATAAATGAACGGCTATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR-3UTR GCA 90 bp | AGCATAGCCGTTCATTTATGTCTCTTAACCCTTCTTCAGTCTCCAGTTCAGGCTAGCACTCCACACAAGTaGACCCTCACCTCCCACCAG | + |
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Preference number: 2 (lower is better) Translates to: SIAVHLCLLTLLQSPVQASTPHK*TLTSHQ Trigger: CTGGTGGGAGGTGAGGGTGCACTTGTGTGGAGTGCT...AGCCTGAACTGGAGACTGAAGAAGGGTTAAGAGACATAAATGAACGGCTATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR-3UTR CCA 90 bp | TTGTCTTTGGTCTCACTGACATCAAGGTCAACACAACTGCATGGGTCCAGGTTTTGGAAGTTTCCTGAATaGCTGGAGGCTCGGGTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: LSLVSLTSRSTQLHGSRFWKFPE*LEARVP Trigger: TGGCACCCGAGCCTCCAGCCATTCAGGAAACTTCCA...AAACCTGGACCCATGCAGTTGTGTTGACCTTGATGTCAGTGAGACCAAAGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR-3UTR CCA 90 bp | AGCATAGCCGTTCATTTATGTCTCTTAACCCTTCTTCAGTCTCCAGTTCAGGCTTCTCTTCCATGGCTTTaGGGTAAGGAGCTGGGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: SIAVHLCLLTLLQSPVQASLPWL*GKELGS Trigger: GCTCCCCAGCTCCTTACCCCAAAGCCATGGAAGAGA...AGCCTGAACTGGAGACTGAAGAAGGGTTAAGAGACATAAATGAACGGCTATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR-3UTR CCA 90 bp | CCTGACATGGAGTCACCCAGTAGAATCCAGGAGCATAGCCGTTCATTTATGTCTGGCCTCTTCCAGTGTTaGGGGAGAAAGCAGTTTTAC | + |
|
Preference number: 2 (lower is better) Translates to: PDMESPSRIQEHSRSFMSGLFQC*GRKQFY Trigger: GTAAAACTGCTTTCTCCCCCAACACTGGAAGAGGCC...AGACATAAATGAACGGCTATGCTCCTGGATTCTACTGGGTGACTCCATGTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR-3UTR TCA 90 bp | CCTGACATGGAGTCACCCAGTAGAATCCAGGAGCATAGCCGTTCATTTATGTCTCTCACTGCAGTCCTGTaGGGTAGGTATTATTTCACC | + |
|
Preference number: 2 (lower is better) Translates to: PDMESPSRIQEHSRSFMSLTAVL*GRYYFT Trigger: GGTGAAATAATACCTACCTCACAGGACTGCAGTGAG...AGACATAAATGAACGGCTATGCTCCTGGATTCTACTGGGTGACTCCATGTCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR-3UTR CCA 90 bp | AAGTTAGATAGGAAAATTGACTATGGGTACTGTTATCCAAGCCAGAGGACTAAAGTCCCTAGGAAGCCCTaGCTGGGGAGAGAACGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: KLDRKIDYGYCYPSQRTKVPRKP*LGRERQ Trigger: CTGCCGTTCTCTCCCCAGCCAGGGCTTCCTAGGGAC...TTTAGTCCTCTGGCTTGGATAACAGTACCCATAGTCAATTTTCCTATCTAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR-3UTR CCA 90 bp | AGACTTGCCTGTCAGAGGGTCTGGCTAGAGAAAATGGCTTTGCAAATATACATTATCCCTCAGGGAAGGTaGCAATGCCAGCTGTTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: RLACQRVWLEKMALQIYIIPQGR*QCQLFQ Trigger: TTGAAACAGCTGGCATTGCCACCTTCCCTGAGGGAT...AATGTATATTTGCAAAGCCATTTTCTCTAGCCAGACCCTCTGACAGGCAAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR CAA 90 bp | AGTTTCTACACCAAGGGATCTGAGCCCTCAAGGGCAGAAGTTTATTaGGAAGTCAAGAGTAAGGTACTTGTGCTTTGTCTTTGGTCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: SFYTKGSEPSRAEVY*EVKSKVLVLCLWSH Trigger: GTGAGACCAAAGACAAAGCACAAGTACCTTACTCTTGACTTCCAAATAAACTTCTGCCCTTGAGGGCTCAGATCCCTTGGTGTAGAAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR-3UTR TCA 90 bp | AGGAGCATAGCCGTTCATTTATGTCTCTTAACCCTTCTTCAGTCTCCAGTTCAGTGTCTTTGGTCTCACTaGCATCAAGGTCAACACAAC | + |
|
Preference number: 2 (lower is better) Translates to: RSIAVHLCLLTLLQSPVQCLWSH*HQGQHN Trigger: GTTGTGTTGACCTTGATGTCAGTGAGACCAAAGACA...CTGAACTGGAGACTGAAGAAGGGTTAAGAGACATAAATGAACGGCTATGCTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR-3UTR CCA 90 bp | AAGTTAGATAGGAAAATTGACTATGGGTACTGTTATCCAAGCCAGAGGACTAAACCAGCACTGTGGCAATaGAGGCAGGAGATTGGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: KLDRKIDYGYCYPSQRTKPALWQ*RQEIGS Trigger: ACTCCCAATCTCCTGCCTCCATTGCCACAGTGCTGG...TTTAGTCCTCTGGCTTGGATAACAGTACCCATAGTCAATTTTCCTATCTAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR-3UTR CCA 90 bp | AAGTTAGATAGGAAAATTGACTATGGGTACTGTTATCCAAGCCAGAGGACTAAACACAAATCCCTCATTTaGGCATCCTTGCCCCAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: KLDRKIDYGYCYPSQRTKHKSLI*ASLPQP Trigger: GGGCTGGGGCAAGGATGCCCAAATGAGGGATTTGTG...TTTAGTCCTCTGGCTTGGATAACAGTACCCATAGTCAATTTTCCTATCTAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR CAA 90 bp | AGCCCTCAAGGGCAGAAGTTTATTTGGAAGTCAAGAGTAAGGTACTaGTGCTTTGTCTTTGGTCTCACTGACATCAAGGTCAACACAACT | + |
|
Preference number: 2 (lower is better) Translates to: SPQGQKFIWKSRVRY*CFVFGLTDIKVNTT Trigger: AGTTGTGTTGACCTTGATGTCAGTGAGACCAAAGACAAAGCACAAGTACCTTACTCTTGACTTCCAAATAAACTTCTGCCCTTGAGGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR-3UTR CCA 90 bp | AGACTTGCCTGTCAGAGGGTCTGGCTAGAGAAAATGGCTTTGCAAATATACATTTCAGAAAGAACAGTTTaGGCCAAGCAGCACACATCT | + |
|
Preference number: 2 (lower is better) Translates to: RLACQRVWLEKMALQIYISERTV*AKQHTS Trigger: AGATGTGTGCTGCTTGGCCCAAACTGTTCTTTCTGA...AATGTATATTTGCAAAGCCATTTTCTCTAGCCAGACCCTCTGACAGGCAAGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR-3UTR TCA 90 bp | AAGTTAGATAGGAAAATTGACTATGGGTACTGTTATCCAAGCCAGAGGACTAAAGGAAGGGAAGAAGAGTaGAAAACTGAGCTCCGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: KLDRKIDYGYCYPSQRTKGREEE*KTELRK Trigger: CTTCCGGAGCTCAGTTTTTCACTCTTCTTCCCTTCC...TTTAGTCCTCTGGCTTGGATAACAGTACCCATAGTCAATTTTCCTATCTAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR-3UTR CCA 90 bp | AAGTTAGATAGGAAAATTGACTATGGGTACTGTTATCCAAGCCAGAGGACTAAAGCCTGTCAGAGGGTCTaGCTAGAGAAAATGGCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: KLDRKIDYGYCYPSQRTKACQRV*LEKMAL Trigger: CAAAGCCATTTTCTCTAGCCAGACCCTCTGACAGGC...TTTAGTCCTCTGGCTTGGATAACAGTACCCATAGTCAATTTTCCTATCTAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR-3UTR TCA 90 bp | AAGTTAGATAGGAAAATTGACTATGGGTACTGTTATCCAAGCCAGAGGACTAAAACCCCGATTTCCTGGTaGAAGATCAGAAGGAAAACT | + |
|
Preference number: 2 (lower is better) Translates to: KLDRKIDYGYCYPSQRTKTPISW*KIRRKT Trigger: AGTTTTCCTTCTGATCTTTCACCAGGAAATCGGGGT...TTTAGTCCTCTGGCTTGGATAACAGTACCCATAGTCAATTTTCCTATCTAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR GCA 72 bp | GTGCTTAGACGCAAGCGCTGGGCATGTGCAGGTCGGTaGCTCCTGGAGGCTCCCACGGCCCACCACTGTATT | + |
|
Preference number: 3 (lower is better) Translates to: VLRRKRWACAGR*LLEAPTAHHCI Trigger: AATACAGTGGTGGGCCGTGGGAGCCTCCAGGAGGCACCGACCTGCACATGCCCAGCGCTTGCGTCTAAGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR CCA 72 bp | GACGCAAGCGCTGGGCATGTGCAGGTCGGTGCCTCCTaGAGGCTCCCACGGCCCACCACTGTATTGCCTATA | + |
|
Preference number: 3 (lower is better) Translates to: DASAGHVQVGAS*RLPRPTTVLPI Trigger: TATAGGCAATACAGTGGTGGGCCGTGGGAGCCTCCAGGAGGCACCGACCTGCACATGCCCAGCGCTTGCGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR GCA 72 bp | TCCACACAAGTGCACCCTCACCTCCCACCAGCAGGATaGTCTTGCCTCCCTGGCTCCACAGAAGCGAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: STQVHPHLPPAG*SCLPGSTEASQ Trigger: CTGACTCGCTTCTGTGGAGCCAGGGAGGCAAGAGCATCCTGCTGGTGGGAGGTGAGGGTGCACTTGTGTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR CCA 72 bp | ATCCCTCATTTGGGCATCCTTGCCCCAGCCCTCCGGTaGCAGTCGTCTGTCACCCTGACATGGAGTCACCCA | + |
|
Preference number: 3 (lower is better) Translates to: IPHLGILAPALR*QSSVTLTWSHP Trigger: TGGGTGACTCCATGTCAGGGTGACAGACGACTGCCACCGGAGGGCTGGGGCAAGGATGCCCAAATGAGGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR CCA 72 bp | CCTAATGGCATTCGATCTGTGCTTAGACGCAAGCGCTaGGCATGTGCAGGTCGGTGCCTCCTGGAGGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: PNGIRSVLRRKR*ACAGRCLLEAP Trigger: GGGAGCCTCCAGGAGGCACCGACCTGCACATGCCCAGCGCTTGCGTCTAAGCACAGATCGAATGCCATTAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR GCA 72 bp | GGGACAAGAAAGGGTGCCCTCAGGTGTCATCAAGGCTaGCACCAACCCCGGCTTCATGGTCTCTTCCATGGC | + |
|
Preference number: 3 (lower is better) Translates to: GTRKGALRCHQG*HQPRLHGLFHG Trigger: GCCATGGAAGAGACCATGAAGCCGGGGTTGGTGGCAGCCTTGATGACACCTGAGGGCACCCTTTCTTGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR GCA 72 bp | GGGTCCAGGTTTCCCCAAAGTCAACCGTATGAGAGGTaGTGTAGCCCACTGGCACCGGGACCAACCTCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GSRFPQSQPYER*CSPLAPGPTSA Trigger: TGCTGAGGTTGGTCCCGGTGCCAGTGGGCTACAGCACCTCTCATACGGTTGACTTTGGGGAAACCTGGACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR GCA 72 bp | CAAGTGCACCCTCACCTCCCACCAGCAGGATGCTCTTaGCTCCCTGGCTCCACAGAAGCGAGTCAGTCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: QVHPHLPPAGCS*LPGSTEASQSD Trigger: ATCTGACTGACTCGCTTCTGTGGAGCCAGGGAGGCAAGAGCATCCTGCTGGTGGGAGGTGAGGGTGCACTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR CCA 72 bp | CAGGTGTCATCAAGGCTGCCACCAACCCCGGCTTCATaGTCTCTTCCATGGCTTTGGGGTAAGGAGCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: QVSSRLPPTPAS*SLPWLWGKELG Trigger: CCCCAGCTCCTTACCCCAAAGCCATGGAAGAGACCATGAAGCCGGGGTTGGTGGCAGCCTTGATGACACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR CCA 72 bp | AATGGAGGCAGGAGATTGGGAGTTCAAGGCCAGTCTTaGCTACATAGAGAGGTGGAGGCCCGCCTGGGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: NGGRRLGVQGQS*LHREVEARLGH Trigger: GTGGCCCAGGCGGGCCTCCACCTCTCTATGTAGCCAAGACTGGCCTTGAACTCCCAATCTCCTGCCTCCATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR CCA 72 bp | CCCTCACCTCCCACCAGCAGGATGCTCTTGCCTCCCTaGCTCCACAGAAGCGAGTCAGTCAGATACGTGACA | + |
|
Preference number: 3 (lower is better) Translates to: PSPPTSRMLLPP*LHRSESVRYVT Trigger: TGTCACGTATCTGACTGACTCGCTTCTGTGGAGCCAGGGAGGCAAGAGCATCCTGCTGGTGGGAGGTGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR CCA 72 bp | CCAGCCCTCCGGTGGCAGTCGTCTGTCACCCTGACATaGAGTCACCCAGTAGAATCCAGGAGCATAGCCGTT | + |
|
Preference number: 3 (lower is better) Translates to: PALRWQSSVTLT*SHPVESRSIAV Trigger: AACGGCTATGCTCCTGGATTCTACTGGGTGACTCCATGTCAGGGTGACAGACGACTGCCACCGGAGGGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR GCA 72 bp | TCTAGCCCCACACTCAGGGGGTGTGCAAGCCGGCTCTaGCAGAAGTCAAGAGAAGGTGTGAGTACCTTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SSPTLRGCASRL*QKSREGVSTFS Trigger: GGAGAAGGTACTCACACCTTCTCTTGACTTCTGGCAGAGCCGGCTTGCACACCCCCTGAGTGTGGGGCTAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR CCA 72 bp | GCAGGGTGTGGGCTCACACCTGTCATACCAGCACTGTaGCAATGGAGGCAGGAGATTGGGAGTTCAAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: AGCGLTPVIPAL*QWRQEIGSSRP Trigger: TGGCCTTGAACTCCCAATCTCCTGCCTCCATTGCCACAGTGCTGGTATGACAGGTGTGAGCCCACACCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR TCA 72 bp | GTAGCCCACTGGCACCGGGACCAACCTCAGCAACCCTaGGATCGCTATTTGAAGACTTGCCTGTCAGAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: VAHWHRDQPQQP*DRYLKTCLSEG Trigger: ACCCTCTGACAGGCAAGTCTTCAAATAGCGATCTCAGGGTTGCTGAGGTTGGTCCCGGTGCCAGTGGGCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR GCA 72 bp | ATGCCATCCTATCTCCATGTCAGGGACAAGAAAGGGTaGCCTCAGGTGTCATCAAGGCTGCCACCAACCCCG | + |
|
Preference number: 3 (lower is better) Translates to: MPSYLHVRDKKG*PQVSSRLPPTP Trigger: CGGGGTTGGTGGCAGCCTTGATGACACCTGAGGGCACCCTTTCTTGTCCCTGACATGGAGATAGGATGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR CCA 72 bp | AGTGAAAAACTGAGCTCCGGAAGTGCCAGGGTGGCATaGTCCTGCCATGCCAAGGACAAGGGCTGTCAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: SEKLSSGSARVA*SCHAKDKGCQS Trigger: AGACTGACAGCCCTTGTCCTTGGCATGGCAGGACCATGCCACCCTGGCACTTCCGGAGCTCAGTTTTTCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR TCA 72 bp | CAGCTGTTTCAAGGGAAGGGAAGAAGAGTGAAAAACTaGGCTCCGGAAGTGCCAGGGTGGCATGGTCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: QLFQGKGRRVKN*APEVPGWHGPA Trigger: GGCAGGACCATGCCACCCTGGCACTTCCGGAGCTCAGTTTTTCACTCTTCTTCCCTTCCCTTGAAACAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR TCA 72 bp | CTCCCTGGCTCCACAGAAGCGAGTCAGTCAGATACGTaGCATTCTGCTGCCCTCCTGTCTGTCATTCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LPGSTEASQSDT*HSAALLSVILL Trigger: CAGGAGAATGACAGACAGGAGGGCAGCAGAATGTCACGTATCTGACTGACTCGCTTCTGTGGAGCCAGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR GCA 72 bp | GCAGCTGGAAGTTTCCTGAATGGCTGGAGGCTCGGGTaGCATGTTGGTTCTCAGAGCCAGGTTACTCTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: AAGSFLNGWRLG*HVGSQSQVTLS Trigger: GCTTAGAGTAACCTGGCTCTGAGAACCAACATGGCACCCGAGCCTCCAGCCATTCAGGAAACTTCCAGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR GCA 72 bp | CTCCACAGAAGCGAGTCAGTCAGATACGTGACATTCTaGTGCCCTCCTGTCTGTCATTCTCCTGGGCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LHRSESVRYVTF*CPPVCHSPGPS Trigger: GGAAGGCCCAGGAGAATGACAGACAGGAGGGCAGCAGAATGTCACGTATCTGACTGACTCGCTTCTGTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR CCA 72 bp | GCAGGGCCAGGTCCTTCCTGCTCAGAAAGAACAGTTTaGGCCAAGCAGCACACATCTCAGATAGGACTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: AGPGPSCSERTV*AKQHTSQIGLG Trigger: GCCAAGTCCTATCTGAGATGTGTGCTGCTTGGCCCAAACTGTTCTTTCTGAGCAGGAAGGACCTGGCCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR GCA 72 bp | GCCCTCCTGTCTGTCATTCTCCTGGGCCTTCCACACTaGAGGTTGATTCCAGTTGCCCTCTGCTTAGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: ALLSVILLGLPH*RLIPVALCLVS Trigger: AGAAACTAAGCAGAGGGCAACTGGAATCAACCTGCAGTGTGGAAGGCCCAGGAGAATGACAGACAGGAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR-3UTR CAA 90 bp | GTATTATTTCACCCTTTGGGTAGATGGGAGAAGCTGCAAGGGCTGCCTATAAGCTCTTCAGAGCCCAGCTaGCCTCTCACAACTGCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: VLFHPLGRWEKLQGLPISSSEPS*PLTTAP Trigger: GGGGGCAGTTGTGAGAGGCAAGCTGGGCTCTGAAGA...GCTTATAGGCAGCCCTTGCAGCTTCTCCCATCTACCCAAAGGGTGAAATAATAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR GCA 72 bp | TCTCCTGGGCCTTCCACACTGCAGGTTGATTCCAGTTaGCCTCTGCTTAGTTTCTACACCAAGGGATCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SPGPSTLQVDSS*PLLSFYTKGSE Trigger: CTCAGATCCCTTGGTGTAGAAACTAAGCAGAGGGCAACTGGAATCAACCTGCAGTGTGGAAGGCCCAGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR CCA 72 bp | TGTCATACCAGCACTGTGGCAATGGAGGCAGGAGATTaGGAGTTCAAGGCCAGTCTTGGCTACATAGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: CHTSTVAMEAGD*EFKASLGYIER Trigger: CCTCTCTATGTAGCCAAGACTGGCCTTGAACTCCCAATCTCCTGCCTCCATTGCCACAGTGCTGGTATGACA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR CCA 72 bp | GCAGTTTTACATGAAGGCAGCTGGAAGTTTCCTGAATaGCTGGAGGCTCGGGTGCCATGTTGGTTCTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: AVLHEGSWKFPE*LEARVPCWFSE Trigger: CTCTGAGAACCAACATGGCACCCGAGCCTCCAGCCATTCAGGAAACTTCCAGCTGCCTTCATGTAAAACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR TCA 72 bp | ATGCTGGATGGACACAGAAGGAGCAAAGGTATGGGATaGCAAGTCCTAGGAAAGCATCCCTCAGGGAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: MLDGHRRSKGMG*QVLGKHPSGKV Trigger: CACCTTCCCTGAGGGATGCTTTCCTAGGACTTGTCATCCCATACCTTTGCTCCTTCTGTGTCCATCCAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR-3UTR CAA 90 bp | CACTGCAGGTTGATTCCAGTTGCCCTCTGCTTAGTTTCTACACCAAGGGATCTGCTCAGAAAGAACAGTTaGGGCCAAGCAGCACACATC | + |
|
Preference number: 3 (lower is better) Translates to: HCRLIPVALCLVSTPRDLLRKNS*GQAAHI Trigger: GATGTGTGCTGCTTGGCCCAAACTGTTCTTTCTGAG...CAGATCCCTTGGTGTAGAAACTAAGCAGAGGGCAACTGGAATCAACCTGCAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR-3UTR CAA 90 bp | CCTGACATGGAGTCACCCAGTAGAATCCAGGAGCATAGCCGTTCATTTATGTCTAATGGAGGCAGGAGATaGGGAGTTCAAGGCCAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: PDMESPSRIQEHSRSFMSNGGRR*GVQGQS Trigger: AGACTGGCCTTGAACTCCCAATCTCCTGCCTCCATT...AGACATAAATGAACGGCTATGCTCCTGGATTCTACTGGGTGACTCCATGTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR TCA 72 bp | AAGTCACACCAAGCTGTGCAATTAATTCAGGGAGTGTaGGCCGAAAGAAAAGGGGCTCAGAACCAGGACTCG | + |
|
Preference number: 3 (lower is better) Translates to: KSHQAVQLIQGV*AERKGAQNQDS Trigger: CGAGTCCTGGTTCTGAGCCCCTTTTCTTTCGGCTCACACTCCCTGAATTAATTGCACAGCTTGGTGTGACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR-3UTR CAA 90 bp | AAGTTAGATAGGAAAATTGACTATGGGTACTGTTATCCAAGCCAGAGGACTAAACTCATTTGGGCATCCTaGCCCCAGCCCTCCGGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: KLDRKIDYGYCYPSQRTKLIWAS*PQPSGG Trigger: GCCACCGGAGGGCTGGGGCAAGGATGCCCAAATGAG...TTTAGTCCTCTGGCTTGGATAACAGTACCCATAGTCAATTTTCCTATCTAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR-3UTR CAA 90 bp | CACTGCAGGTTGATTCCAGTTGCCCTCTGCTTAGTTTCTACACCAAGGGATCTGACTTGTGCTTTGTCTTaGGTCTCACTGACATCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: HCRLIPVALCLVSTPRDLTCALS*VSLTSR Trigger: CCTTGATGTCAGTGAGACCAAAGACAAAGCACAAGT...CAGATCCCTTGGTGTAGAAACTAAGCAGAGGGCAACTGGAATCAACCTGCAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR CCA 72 bp | AGAGATGAGGACAGGATAGATGTGGAACATTCTCGCTaGTTATTAGCCTTGTTTCCCAGTGCCTTTCCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: RDEDRIDVEHSR*LLALFPSAFPS Trigger: GCTTGGAAAGGCACTGGGAAACAAGGCTAATAACCAGCGAGAATGTTCCACATCTATCCTGTCCTCATCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR TCA 72 bp | AAAGAGAAGTCCTCTCTAAAGGAACTTCCAGAAGCCTaGTATTCTTCAGAGCCCAGCTTGCCTCTCACAACT | + |
|
Preference number: 3 (lower is better) Translates to: KEKSSLKELPEA*YSSEPSLPLTT Trigger: AGTTGTGAGAGGCAAGCTGGGCTCTGAAGAATATCAGGCTTCTGGAAGTTCCTTTAGAGAGGACTTCTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR TCA 72 bp | AACACAAAAATCTCACCAAGCCTCACTGCAGTCCTGTaGGGTAGGTATTATTTCACCCTTTGGGTAGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: NTKISPSLTAVL*GRYYFTLWVDG Trigger: CCCATCTACCCAAAGGGTGAAATAATACCTACCTCACAGGACTGCAGTGAGGCTTGGTGAGATTTTTGTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR TCA 72 bp | AAGAGTAAGGTACTTGTGCTTTGTCTTTGGTCTCACTaGCATCAAGGTCAACACAACTGCATGGGTCCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: KSKVLVLCLWSH*HQGQHNCMGPG Trigger: ACCTGGACCCATGCAGTTGTGTTGACCTTGATGTCAGTGAGACCAAAGACAAAGCACAAGTACCTTACTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR GCA 72 bp | CAGAAGTTTATTTGGAAGTCAAGAGTAAGGTACTTGTaGTTTGTCTTTGGTCTCACTGACATCAAGGTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: QKFIWKSRVRYL*FVFGLTDIKVN Trigger: GTTGACCTTGATGTCAGTGAGACCAAAGACAAAGCACAAGTACCTTACTCTTGACTTCCAAATAAACTTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR CAA 72 bp | ATCTCCTGTAGGCTTCCTCCCCCAGTCAACCAACCCTaGTCCCTAGGAAGCCCTGGCTGGGGAGAGAACGGC | + |
|
Preference number: 4 (lower is better) Translates to: ISCRLPPPVNQP*SLGSPGWGENG Trigger: GCCGTTCTCTCCCCAGCCAGGGCTTCCTAGGGACAAGGGTTGGTTGACTGGGGGAGGAAGCCTACAGGAGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| CDS-3UTR TCA 90 bp | AAGGGCCTTCTCATCTGGAAACAAGGGTCCCTGAGGCAAAGGCAGACCCAGAGCCCCAGCCATCTCGCCTaGGTATTGCCTCGGTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KGLLIWKQGSLRQRQTQSPSHLA*VLPRFP Trigger: TGGGAACCGAGGCAATACTCAGGCGAGATGGCTGGG...GCTCTGGGTCTGCCTTTGCCTCAGGGACCCTTGTTTCCAGATGAGAAGGCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| CDS-3UTR CCA 90 bp | CCCACACTCAGGGGGTGTGCAAGCCGGCTCTGCCAGAAGTCAAGAGAAGGTGTGCCAACGACAGGTACATaGGAAGCAGGAAGAGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: PTLRGCASRLCQKSREGVPTTGT*EAGRDP Trigger: TGGGTCTCTTCCTGCTTCCCATGTACCTGTCGTTGG...CACACCTTCTCTTGACTTCTGGCAGAGCCGGCTTGCACACCCCCTGAGTGTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| CDS-3UTR CCA 90 bp | CCCCACAAGCCTCCTCAGCAGCTGCAGCCCAGAGAGCAAAGACAGACTAGGCAGCCACTTGGAGGAAGATaGTGGCAGAGTTGTTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PHKPPQQLQPREQRQTRQPLGGR*WQSCSS Trigger: ACTTGAACAACTCTGCCACCATCTTCCTCCAAGTGG...CTGCCTAGTCTGTCTTTGCTCTCTGGGCTGCAGCTGCTGAGGAGGCTTGTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR CAA 72 bp | GGCAGGGCCAGGTCCTTCCTGCTCAGAAAGAACAGTTaGGGCCAAGCAGCACACATCTCAGATAGGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRARSFLLRKNS*GQAAHISDRTW Trigger: CCAAGTCCTATCTGAGATGTGTGCTGCTTGGCCCAAACTGTTCTTTCTGAGCAGGAAGGACCTGGCCCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR CAA 72 bp | CTGTCATACCAGCACTGTGGCAATGGAGGCAGGAGATaGGGAGTTCAAGGCCAGTCTTGGCTACATAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSYQHCGNGGRR*GVQGQSWLHRE Trigger: CTCTCTATGTAGCCAAGACTGGCCTTGAACTCCCAATCTCCTGCCTCCATTGCCACAGTGCTGGTATGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| CDS-3UTR CCA 90 bp | AGGAACTTCCAGAAGCCTGATATTCTTCAGAGCCCAGCTTGCCTCTCACAACTGGCTTCTCTTCTGCCTTaGAGCCAGGCAACCCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RNFQKPDILQSPACLSQLASLLP*SQATRS Trigger: AGAACGGGTTGCCTGGCTCCAAGGCAGAAGAGAAGC...CAGTTGTGAGAGGCAAGCTGGGCTCTGAAGAATATCAGGCTTCTGGAAGTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| CDS-3UTR GCA 90 bp | AGGAGCATAGCCGTTCATTTATGTCTCTTAACCCTTCTTCAGTCTCCAGTTCAGGACCCAAAAGCCCAGTaGCCAGCCATCTCGCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RSIAVHLCLLTLLQSPVQDPKAQ*PAISPE Trigger: CTCAGGCGAGATGGCTGGGCACTGGGCTTTTGGGTC...CTGAACTGGAGACTGAAGAAGGGTTAAGAGACATAAATGAACGGCTATGCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR CAA 72 bp | GCTTCCTCTCAGGAAAGCAAGAAGAACCCCCAACACTaGGCCTCTTCCAGTGTTGGGGGAGAAAGCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ASSQESKKNPQH*ASSSVGGESSF Trigger: AAAACTGCTTTCTCCCCCAACACTGGAAGAGGCCAAGTGTTGGGGGTTCTTCTTGCTTTCCTGAGAGGAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| CDS-3UTR TCA 90 bp | GTATTATTTCACCCTTTGGGTAGATGGGAGAAGCTGCAAGGGCTGCCTATAAGCATCTGCCCGTGTCACTaGACTCCAGGTCACTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLFHPLGRWEKLQGLPISICPCH*TPGHSR Trigger: TCTTGAGTGACCTGGAGTTCAGTGACACGGGCAGAT...GCTTATAGGCAGCCCTTGCAGCTTCTCCCATCTACCCAAAGGGTGAAATAATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| CDS-3UTR TCA 90 bp | GTTGGTTCTCAGAGCCAGGTTACTCTAAGCAGGGTGTGGGCTCACACCTGTCATTATTGTAGGACCACTTaGAGTAGAGGTTCTCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VGSQSQVTLSRVWAHTCHYCRTT*SRGSQS Trigger: GCTTTGAGAACCTCTACTTCAAGTGGTCCTACAATA...ATGACAGGTGTGAGCCCACACCCTGCTTAGAGTAACCTGGCTCTGAGAACCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| CDS-3UTR TCA 90 bp | TCTGACATTAAGGGTATCAGAAATCTGATGAGGAAGAGGGACTTTGGGTATCCCAAACAAGAAGTCCAATaGCCCCGCCCACCACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SDIKGIRNLMRKRDFGYPKQEVQ*PRPPQP Trigger: TGGCTGTGGTGGGCGGGGTCATTGGACTTCTTGTTT...GGGATACCCAAAGTCCCTCTTCCTCATCAGATTTCTGATACCCTTAATGTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| CDS-3UTR GCA 90 bp | AGCATAGCCGTTCATTTATGTCTCTTAACCCTTCTTCAGTCTCCAGTTCAGGCTAACAGCTGGAGAAGGTaGAGGGCAGCAGGATCGATG | + |
|
Preference number: 4 (lower is better) Translates to: SIAVHLCLLTLLQSPVQANSWRR*RAAGSM Trigger: CATCGATCCTGCTGCCCTGCACCTTCTCCAGCTGTT...AGCCTGAACTGGAGACTGAAGAAGGGTTAAGAGACATAAATGAACGGCTATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| CDS-3UTR CCA 90 bp | CCTGACATGGAGTCACCCAGTAGAATCCAGGAGCATAGCCGTTCATTTATGTCTTCACACTTTTGTGGGTaGCTTCTCTTCTGCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PDMESPSRIQEHSRSFMSSHFCG*LLFCLG Trigger: TCCAAGGCAGAAGAGAAGCCACCCACAAAAGTGTGA...AGACATAAATGAACGGCTATGCTCCTGGATTCTACTGGGTGACTCCATGTCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| CDS-3UTR CCA 90 bp | AGACTTGCCTGTCAGAGGGTCTGGCTAGAGAAAATGGCTTTGCAAATATACATTCAAAGCCATAACAGCTaGAGAAGGTGCAGGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RLACQRVWLEKMALQIYIQSHNS*RRCRAA Trigger: TGCTGCCCTGCACCTTCTCCAGCTGTTATGGCTTTG...AATGTATATTTGCAAAGCCATTTTCTCTAGCCAGACCCTCTGACAGGCAAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| CDS-3UTR CCA 90 bp | AGGAACTTCCAGAAGCCTGATATTCTTCAGAGCCCAGCTTGCCTCTCACAACTGAATTTATCAACCACTTaGAGGAAGATGGTGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RNFQKPDILQSPACLSQLNLSTT*RKMVAE Trigger: CTCTGCCACCATCTTCCTCCAAGTGGTTGATAAATT...CAGTTGTGAGAGGCAAGCTGGGCTCTGAAGAATATCAGGCTTCTGGAAGTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| CDS-3UTR CCA 90 bp | AGACTTGCCTGTCAGAGGGTCTGGCTAGAGAAAATGGCTTTGCAAATATACATTCTTGGAGGAAGATGGTaGCAGAGTTGTTCAAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RLACQRVWLEKMALQIYILGGRW*QSCSSP Trigger: AGGACTTGAACAACTCTGCCACCATCTTCCTCCAAG...AATGTATATTTGCAAAGCCATTTTCTCTAGCCAGACCCTCTGACAGGCAAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR CAA 72 bp | ACCAAGGGATCTGAGCCCTCAAGGGCAGAAGTTTATTaGGAAGTCAAGAGTAAGGTACTTGTGCTTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TKGSEPSRAEVY*EVKSKVLVLCL Trigger: AAGACAAAGCACAAGTACCTTACTCTTGACTTCCAAATAAACTTCTGCCCTTGAGGGCTCAGATCCCTTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| 3UTR CAA 72 bp | CTTGCCTGTCAGAGGGTCTGGCTAGAGAAAATGGCTTaGCAAATATACATTCTAACACAATCCGTGGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: LACQRVWLEKMA*QIYILTQSVVM Trigger: CATTACCACGGATTGTGTTAGAATGTATATTTGCAAAGCCATTTTCTCTAGCCAGACCCTCTGACAGGCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| 3UTR CAA 72 bp | GGGCAGAAGTTTATTTGGAAGTCAAGAGTAAGGTACTaGTGCTTTGTCTTTGGTCTCACTGACATCAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GQKFIWKSRVRY*CFVFGLTDIKV Trigger: GACCTTGATGTCAGTGAGACCAAAGACAAAGCACAAGTACCTTACTCTTGACTTCCAAATAAACTTCTGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| CDS GCA 90 bp | CCAACGACAGGTACATGGGAAGCAGGAAGAGACCCAAAAGCCCAGTaGCCAGCCATCTCGCCTGAGTATTGCCTCGGTTCCCAGCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: PTTGTWEAGRDPKAQ*PAISPEYCLGSQPG Trigger: CCCGGGCTGGGAACCGAGGCAATACTCAGGCGAGATGGCTGGGCACTGGGCTTTTGGGTCTCTTCCTGCTTCCCATGTACCTGTCGTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| CDS-3UTR CAA 90 bp | AACCCCTTCATCCCACATCACCCCTCGCGTGCACAGCCCACCCTCTTCTGTCATGGCTTCTCTTCTGCCTaGGAGCCAGGCAACCCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: NPFIPHHPSRAQPTLFCHGFSSA*EPGNPF Trigger: GAACGGGTTGCCTGGCTCCAAGGCAGAAGAGAAGCC...ATGACAGAAGAGGGTGGGCTGTGCACGCGAGGGGTGATGTGGGATGAAGGGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| CDS-3UTR CAA 90 bp | TCTGTGCTTAGACGCAAGCGCTGGGCATGTGCAGGTCGGTGCCTCCTGGAGGCTAACCCGTTCTCTGTGTaGTCATTCCCAGAGGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: SVLRRKRWACAGRCLLEANPFSV*SFPEEL Trigger: GAGTTCCTCTGGGAATGACAACACAGAGAACGGGTT...AGCCTCCAGGAGGCACCGACCTGCACATGCCCAGCGCTTGCGTCTAAGCACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| CDS-3UTR CAA 90 bp | AAGGGCCTTCTCATCTGGAAACAAGGGTCCCTGAGGCAAAGGCAGACCCAGAGCTTCAAGTCCTTCTCCTaGGGGTTCCTCACGAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KGLLIWKQGSLRQRQTQSFKSFS*GFLTKQ Trigger: CTGCTTCGTGAGGAACCCCAAGGAGAAGGACTTGAA...GCTCTGGGTCTGCCTTTGCCTCAGGGACCCTTGTTTCCAGATGAGAAGGCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| CDS-3UTR CAA 90 bp | CCCACACTCAGGGGGTGTGCAAGCCGGCTCTGCCAGAAGTCAAGAGAAGGTGTGAAGATGGTGGCAGAGTaGTTCAAGTCCTTCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PTLRGCASRLCQKSREGVKMVAE*FKSFSL Trigger: CAAGGAGAAGGACTTGAACAACTCTGCCACCATCTT...CACACCTTCTCTTGACTTCTGGCAGAGCCGGCTTGCACACCCCCTGAGTGTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| CDS TCA 90 bp | CTCAAAGCCATAACAGCTGGAGAAGGTGCAGGGCAGCAGGATCGATaGGCCGTTAATAGCGTAGATGGTGGTGGCCTTTCCCACAGATAC | + |
|
Preference number: 5 (lower is better) Translates to: LKAITAGEGAGQQDR*AVNSVDGGGLSHRY Trigger: GTATCTGTGGGAAAGGCCACCACCATCTACGCTATTAACGGCTCATCGATCCTGCTGCCCTGCACCTTCTCCAGCTGTTATGGCTTTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| CDS TCA 90 bp | TCTCCTTGGGGTTCCTCACGAAGCAGGTGTATCTGCCCGTGTCACTaGACTCCAGGTCACTCAAGAGGATGGAGATGTTATTCGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SPWGSSRSRCICPCH*TPGHSRGWRCYSSS Trigger: AGAAGACGAATAACATCTCCATCCTCTTGAGTGACCTGGAGTTCAGTGACACGGGCAGATACACCTGCTTCGTGAGGAACCCCAAGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| CDS-3UTR CAA 90 bp | GAGACCAGGGGCACTGTTCTCCTGCCTCTGAAACCCAAAGAGCAAAGCCAGTATCAATTTATCAACCACTaGGAGGAAGATGGTGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ETRGTVLLPLKPKEQSQYQFINH*EEDGGR Trigger: TCTGCCACCATCTTCCTCCAAGTGGTTGATAAATTG...ATACTGGCTTTGCTCTTTGGGTTTCAGAGGCAGGAGAACAGTGCCCCTGGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| CDS CCA 90 bp | TGTTGTCCACTTTTTCCAATTTATCAACCACTTGGAGGAAGATGGTaGCAGAGTTGTTCAAGTCCTTCTCCTTGGGGTTCCTCACGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: CCPLFPIYQPLGGRW*QSCSSPSPWGSSRS Trigger: GCTTCGTGAGGAACCCCAAGGAGAAGGACTTGAACAACTCTGCCACCATCTTCCTCCAAGTGGTTGATAAATTGGAAAAAGTGGACAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| CDS GCA 72 bp | GGTACATGGGAAGCAGGAAGAGACCCAAAAGCCCAGTaGCCAGCCATCTCGCCTGAGTATTGCCTCGGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GTWEAGRDPKAQ*PAISPEYCLGS Trigger: GGAACCGAGGCAATACTCAGGCGAGATGGCTGGGCACTGGGCTTTTGGGTCTCTTCCTGCTTCCCATGTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| CDS CCA 72 bp | TGGCCTTTCCCACAGATACCTCCAACGACAGGTACATaGGAAGCAGGAAGAGACCCAAAAGCCCAGTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: WPFPQIPPTTGT*EAGRDPKAQCP Trigger: TGGGCACTGGGCTTTTGGGTCTCTTCCTGCTTCCCATGTACCTGTCGTTGGAGGTATCTGTGGGAAAGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| CDS TCA 72 bp | ATAACAGCTGGAGAAGGTGCAGGGCAGCAGGATCGATaGGCCGTTAATAGCGTAGATGGTGGTGGCCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ITAGEGAGQQDR*AVNSVDGGGLS Trigger: GGAAAGGCCACCACCATCTACGCTATTAACGGCTCATCGATCCTGCTGCCCTGCACCTTCTCCAGCTGTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| CDS CCA 72 bp | GGAAGATGGTGGCAGAGTTGTTCAAGTCCTTCTCCTTaGGGTTCCTCACGAAGCAGGTGTATCTGCCCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: GRWWQSCSSPSP*GSSRSRCICPC Trigger: ACACGGGCAGATACACCTGCTTCGTGAGGAACCCCAAGGAGAAGGACTTGAACAACTCTGCCACCATCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| CDS CAA 72 bp | TCTTCTGCCTTGGAGCCAGGCAACCCGTTCTCTGTGTaGTCATTCCCAGAGGAACTCACGAGACACTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSALEPGNPFSV*SFPEELTRHSF Trigger: GAAGGAGTGTCTCGTGAGTTCCTCTGGGAATGACAACACAGAGAACGGGTTGCCTGGCTCCAAGGCAGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| CDS CAA 90 bp | GGTGGCTTCTCTTCTGCCTTGGAGCCAGGCAACCCGTTCTCTGTGTaGTCATTCCCAGAGGAACTCACGAGACACTCCTTCTTCTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GGFSSALEPGNPFSV*SFPEELTRHSFFFS Trigger: AGAGAAGAAGAAGGAGTGTCTCGTGAGTTCCTCTGGGAATGACAACACAGAGAACGGGTTGCCTGGCTCCAAGGCAGAAGAGAAGCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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| CDS CAA 72 bp | CCGCCCACCACAGCCAGGATGATGAGAGTCACCGTGTaGTCCACTTTTTCCAATTTATCAACCACTTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PPTTARMMRVTV*STFSNLSTTWR Trigger: CCTCCAAGTGGTTGATAAATTGGAAAAAGTGGACAACACGGTGACTCTCATCATCCTGGCTGTGGTGGGCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
||
| CDS CAA 90 bp | AACTCCAGGTCACTCAAGAGGATGGAGATGTTATTCGTCTTCTCCTaGGTGGAGCCCTCTAGGGTGATTCGATCATCATCCTTCACTCTC | + |
|
Preference number: 6 (lower is better) Translates to: NSRSLKRMEMLFVFS*VEPSRVIRSSSFTL Trigger: GAGAGTGAAGGATGATGATCGAATCACCCTAGAGGGCTCCACCAAGGAGAAGACGAATAACATCTCCATCCTCTTGAGTGACCTGGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060125.7 |
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